2023-09-16T07:01:38,639 Created temporary directory: /tmp/pip-build-tracker-w09t812k 2023-09-16T07:01:38,640 Initialized build tracking at /tmp/pip-build-tracker-w09t812k 2023-09-16T07:01:38,641 Created build tracker: /tmp/pip-build-tracker-w09t812k 2023-09-16T07:01:38,641 Entered build tracker: /tmp/pip-build-tracker-w09t812k 2023-09-16T07:01:38,642 Created temporary directory: /tmp/pip-wheel-hcoic0qk 2023-09-16T07:01:38,645 Created temporary directory: /tmp/pip-ephem-wheel-cache-nts3yyv8 2023-09-16T07:01:38,667 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-16T07:01:38,671 2 location(s) to search for versions of pyfastchem: 2023-09-16T07:01:38,671 * https://pypi.org/simple/pyfastchem/ 2023-09-16T07:01:38,671 * https://www.piwheels.org/simple/pyfastchem/ 2023-09-16T07:01:38,672 Fetching project page and analyzing links: https://pypi.org/simple/pyfastchem/ 2023-09-16T07:01:38,672 Getting page https://pypi.org/simple/pyfastchem/ 2023-09-16T07:01:38,674 Found index url https://pypi.org/simple/ 2023-09-16T07:01:38,893 Fetched page https://pypi.org/simple/pyfastchem/ as application/vnd.pypi.simple.v1+json 2023-09-16T07:01:38,896 Found link https://files.pythonhosted.org/packages/bc/10/2ca5b5cd6b8294bc84b84a747895cf75eed2d783f40d4faca2bef251fddd/pyfastchem-2.0.tar.gz (from https://pypi.org/simple/pyfastchem/), version: 2.0 2023-09-16T07:01:38,897 Found link https://files.pythonhosted.org/packages/ea/0d/081ab03d1519c975f52a93c9aff91b12ab726e2391d4eb80383431c59d90/pyfastchem-2.1.tar.gz (from https://pypi.org/simple/pyfastchem/), version: 2.1 2023-09-16T07:01:38,897 Found link https://files.pythonhosted.org/packages/e7/e9/b869b26d4a71f6b0810bc49bcec8328d6c9f8a2b121eb5b783cf7f3cb513/pyfastchem-2.1.1.tar.gz (from https://pypi.org/simple/pyfastchem/), version: 2.1.1 2023-09-16T07:01:38,898 Found link https://files.pythonhosted.org/packages/f1/89/e1fd4174a676cb8b32e39777aa130e29d24c646f18eca6e7b8a954201e3a/pyfastchem-3.0.tar.gz (from https://pypi.org/simple/pyfastchem/), version: 3.0 2023-09-16T07:01:38,898 Found link https://files.pythonhosted.org/packages/4e/17/36bf119bc612cd32aa019f4c1c6f6d0b4fa4496060489e5433e520cfff07/pyfastchem-3.0.1.tar.gz (from https://pypi.org/simple/pyfastchem/), version: 3.0.1 2023-09-16T07:01:38,899 Found link https://files.pythonhosted.org/packages/d8/9e/bea812ab851536c2309eb2553d4b4a920aeeeee17114909cefb09112f36a/pyfastchem-3.0.2.tar.gz (from https://pypi.org/simple/pyfastchem/), version: 3.0.2 2023-09-16T07:01:38,900 Found link https://files.pythonhosted.org/packages/0e/48/b5afd76c51bff516e9e68e19d3d24caad7f66059427840d1231fea857e38/pyfastchem-3.0.3.tar.gz (from https://pypi.org/simple/pyfastchem/), version: 3.0.3 2023-09-16T07:01:38,901 Found link https://files.pythonhosted.org/packages/92/35/94918e03d60f4b9e13fd8d4f0047b355b02b1345da2b9c13f0cf29affe35/pyfastchem-3.0.4.tar.gz (from https://pypi.org/simple/pyfastchem/), version: 3.0.4 2023-09-16T07:01:38,902 Fetching project page and analyzing links: https://www.piwheels.org/simple/pyfastchem/ 2023-09-16T07:01:38,903 Getting page https://www.piwheels.org/simple/pyfastchem/ 2023-09-16T07:01:38,904 Found index url https://www.piwheels.org/simple/ 2023-09-16T07:01:39,255 Fetched page https://www.piwheels.org/simple/pyfastchem/ as text/html 2023-09-16T07:01:39,262 Skipping link: No binaries permitted for pyfastchem: https://www.piwheels.org/simple/pyfastchem/pyfastchem-2.1.1-cp39-cp39-linux_armv7l.whl#sha256=a82c735b13bfcc90f9109a1960ae3810d796027a69b04a857b99e1e4d5809416 (from https://www.piwheels.org/simple/pyfastchem/) 2023-09-16T07:01:39,263 Skipping link: No binaries permitted for pyfastchem: https://www.piwheels.org/simple/pyfastchem/pyfastchem-2.1.1-cp39-cp39-linux_armv6l.whl#sha256=a82c735b13bfcc90f9109a1960ae3810d796027a69b04a857b99e1e4d5809416 (from https://www.piwheels.org/simple/pyfastchem/) 2023-09-16T07:01:39,264 Skipping link: No binaries permitted for pyfastchem: https://www.piwheels.org/simple/pyfastchem/pyfastchem-2.1.1-cp37-cp37m-linux_armv7l.whl#sha256=4070b99aedc5a00b50b0ac58c34923ba3b2ac1b2f563d8b6fae979e8996a93ee (from https://www.piwheels.org/simple/pyfastchem/) 2023-09-16T07:01:39,265 Skipping link: No binaries permitted for pyfastchem: https://www.piwheels.org/simple/pyfastchem/pyfastchem-2.1.1-cp37-cp37m-linux_armv6l.whl#sha256=4070b99aedc5a00b50b0ac58c34923ba3b2ac1b2f563d8b6fae979e8996a93ee (from https://www.piwheels.org/simple/pyfastchem/) 2023-09-16T07:01:39,266 Skipping link: No binaries permitted for pyfastchem: https://www.piwheels.org/simple/pyfastchem/pyfastchem-2.1-cp39-cp39-linux_armv7l.whl#sha256=f212e2c485a285c906eb3adbbbee7fc46fc235bdd3e6a6e3a7bddf8589353ba0 (from https://www.piwheels.org/simple/pyfastchem/) 2023-09-16T07:01:39,266 Skipping link: No binaries permitted for pyfastchem: https://www.piwheels.org/simple/pyfastchem/pyfastchem-2.1-cp39-cp39-linux_armv6l.whl#sha256=f212e2c485a285c906eb3adbbbee7fc46fc235bdd3e6a6e3a7bddf8589353ba0 (from https://www.piwheels.org/simple/pyfastchem/) 2023-09-16T07:01:39,267 Skipping link: No binaries permitted for pyfastchem: https://www.piwheels.org/simple/pyfastchem/pyfastchem-2.1-cp37-cp37m-linux_armv7l.whl#sha256=3462910ddfc50b9001e572aac8f5803185b6381c8218402c8383e02028f3996b (from https://www.piwheels.org/simple/pyfastchem/) 2023-09-16T07:01:39,268 Skipping link: No binaries permitted for pyfastchem: 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https://www.piwheels.org/simple/pyfastchem/pyfastchem-2.0-cp39-cp39-linux_armv7l.whl#sha256=0c9bfe4ce169ea96dcf712ac0b28b9fd6a6edf303b89d985674088b51452b530 (from https://www.piwheels.org/simple/pyfastchem/) 2023-09-16T07:01:39,270 Skipping link: No binaries permitted for pyfastchem: https://www.piwheels.org/simple/pyfastchem/pyfastchem-2.0-cp39-cp39-linux_armv6l.whl#sha256=0c9bfe4ce169ea96dcf712ac0b28b9fd6a6edf303b89d985674088b51452b530 (from https://www.piwheels.org/simple/pyfastchem/) 2023-09-16T07:01:39,271 Skipping link: No binaries permitted for pyfastchem: https://www.piwheels.org/simple/pyfastchem/pyfastchem-2.0-cp37-cp37m-linux_armv7l.whl#sha256=4b3467286e38f11340b3ce5bccfee4ce31a02cb9ea58ef6e4db3a2ccdc52a674 (from https://www.piwheels.org/simple/pyfastchem/) 2023-09-16T07:01:39,272 Skipping link: No binaries permitted for pyfastchem: https://www.piwheels.org/simple/pyfastchem/pyfastchem-2.0-cp37-cp37m-linux_armv6l.whl#sha256=4b3467286e38f11340b3ce5bccfee4ce31a02cb9ea58ef6e4db3a2ccdc52a674 (from https://www.piwheels.org/simple/pyfastchem/) 2023-09-16T07:01:39,273 Skipping link: No binaries permitted for pyfastchem: https://www.piwheels.org/simple/pyfastchem/pyfastchem-2.0-cp35-cp35m-linux_armv7l.whl#sha256=97cd49075775ef19697e798c4c489132383d170c5b1c6ad407ad7292180dc8d6 (from https://www.piwheels.org/simple/pyfastchem/) 2023-09-16T07:01:39,273 Skipping link: No binaries permitted for pyfastchem: https://www.piwheels.org/simple/pyfastchem/pyfastchem-2.0-cp35-cp35m-linux_armv6l.whl#sha256=97cd49075775ef19697e798c4c489132383d170c5b1c6ad407ad7292180dc8d6 (from https://www.piwheels.org/simple/pyfastchem/) 2023-09-16T07:01:39,274 Skipping link: not a file: https://www.piwheels.org/simple/pyfastchem/ 2023-09-16T07:01:39,275 Skipping link: not a file: https://pypi.org/simple/pyfastchem/ 2023-09-16T07:01:39,303 Given no hashes to check 1 links for project 'pyfastchem': discarding no candidates 2023-09-16T07:01:39,327 Collecting pyfastchem==2.0 2023-09-16T07:01:39,330 Created temporary directory: /tmp/pip-unpack-pxi2q8iq 2023-09-16T07:01:39,702 Downloading pyfastchem-2.0.tar.gz (2.3 MB) 2023-09-16T07:01:40,505 Added pyfastchem==2.0 from https://files.pythonhosted.org/packages/bc/10/2ca5b5cd6b8294bc84b84a747895cf75eed2d783f40d4faca2bef251fddd/pyfastchem-2.0.tar.gz to build tracker '/tmp/pip-build-tracker-w09t812k' 2023-09-16T07:01:40,510 Created temporary directory: /tmp/pip-build-env-7bncoj59 2023-09-16T07:01:40,514 Installing build dependencies: started 2023-09-16T07:01:40,516 Running command pip subprocess to install build dependencies 2023-09-16T07:01:41,672 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-09-16T07:01:42,156 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-16T07:01:43,806 Collecting setuptools 2023-09-16T07:01:43,807 Obtaining dependency information for setuptools from https://files.pythonhosted.org/packages/bb/26/7945080113158354380a12ce26873dd6c1ebd88d47f5bc24e2c5bb38c16a/setuptools-68.2.2-py3-none-any.whl.metadata 2023-09-16T07:01:43,813 Using cached setuptools-68.2.2-py3-none-any.whl.metadata (6.3 kB) 2023-09-16T07:01:44,023 Collecting wheel 2023-09-16T07:01:44,040 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB) 2023-09-16T07:01:44,343 Collecting setuptools_scm 2023-09-16T07:01:44,371 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-7.1.0-py3-none-any.whl (43 kB) 2023-09-16T07:01:44,553 Collecting pybind11 2023-09-16T07:01:44,580 Using cached https://www.piwheels.org/simple/pybind11/pybind11-2.11.1-py3-none-any.whl (227 kB) 2023-09-16T07:01:44,913 Collecting packaging>=20.0 (from setuptools_scm) 2023-09-16T07:01:44,928 Using cached https://www.piwheels.org/simple/packaging/packaging-23.1-py3-none-any.whl (48 kB) 2023-09-16T07:01:45,054 Collecting typing-extensions (from setuptools_scm) 2023-09-16T07:01:45,074 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.7.1-py3-none-any.whl (33 kB) 2023-09-16T07:01:45,112 Using cached setuptools-68.2.2-py3-none-any.whl (807 kB) 2023-09-16T07:01:47,803 Installing collected packages: wheel, typing-extensions, setuptools, pybind11, packaging, setuptools_scm 2023-09-16T07:01:48,036 Creating /tmp/pip-build-env-7bncoj59/overlay/local/bin 2023-09-16T07:01:48,039 changing mode of /tmp/pip-build-env-7bncoj59/overlay/local/bin/wheel to 755 2023-09-16T07:01:50,588 changing mode of /tmp/pip-build-env-7bncoj59/overlay/local/bin/pybind11-config to 755 2023-09-16T07:01:50,938 Successfully installed packaging-23.1 pybind11-2.11.1 setuptools-68.2.2 setuptools_scm-7.1.0 typing-extensions-4.7.1 wheel-0.41.2 2023-09-16T07:01:51,508 Installing build dependencies: finished with status 'done' 2023-09-16T07:01:51,511 Getting requirements to build wheel: started 2023-09-16T07:01:51,513 Running command Getting requirements to build wheel 2023-09-16T07:01:52,116 running egg_info 2023-09-16T07:01:52,126 writing pyfastchem.egg-info/PKG-INFO 2023-09-16T07:01:52,131 writing dependency_links to pyfastchem.egg-info/dependency_links.txt 2023-09-16T07:01:52,136 writing top-level names to pyfastchem.egg-info/top_level.txt 2023-09-16T07:01:52,388 listing git files failed - pretending there aren't any 2023-09-16T07:01:52,394 reading manifest file 'pyfastchem.egg-info/SOURCES.txt' 2023-09-16T07:01:52,404 writing manifest file 'pyfastchem.egg-info/SOURCES.txt' 2023-09-16T07:01:52,485 Getting requirements to build wheel: finished with status 'done' 2023-09-16T07:01:52,500 Created temporary directory: /tmp/pip-modern-metadata-jxp95aqs 2023-09-16T07:01:52,503 Preparing metadata (pyproject.toml): started 2023-09-16T07:01:52,504 Running command Preparing metadata (pyproject.toml) 2023-09-16T07:01:53,041 running dist_info 2023-09-16T07:01:53,063 creating /tmp/pip-modern-metadata-jxp95aqs/pyfastchem.egg-info 2023-09-16T07:01:53,072 writing /tmp/pip-modern-metadata-jxp95aqs/pyfastchem.egg-info/PKG-INFO 2023-09-16T07:01:53,075 writing dependency_links to /tmp/pip-modern-metadata-jxp95aqs/pyfastchem.egg-info/dependency_links.txt 2023-09-16T07:01:53,078 writing top-level names to /tmp/pip-modern-metadata-jxp95aqs/pyfastchem.egg-info/top_level.txt 2023-09-16T07:01:53,079 writing manifest file '/tmp/pip-modern-metadata-jxp95aqs/pyfastchem.egg-info/SOURCES.txt' 2023-09-16T07:01:53,111 listing git files failed - pretending there aren't any 2023-09-16T07:01:53,114 reading manifest file '/tmp/pip-modern-metadata-jxp95aqs/pyfastchem.egg-info/SOURCES.txt' 2023-09-16T07:01:53,118 writing manifest file '/tmp/pip-modern-metadata-jxp95aqs/pyfastchem.egg-info/SOURCES.txt' 2023-09-16T07:01:53,119 creating '/tmp/pip-modern-metadata-jxp95aqs/pyfastchem-2.0.dist-info' 2023-09-16T07:01:53,298 Preparing metadata (pyproject.toml): finished with status 'done' 2023-09-16T07:01:53,303 Source in /tmp/pip-wheel-hcoic0qk/pyfastchem_558918f3e2754794b345058e3d44220d has version 2.0, which satisfies requirement pyfastchem==2.0 from https://files.pythonhosted.org/packages/bc/10/2ca5b5cd6b8294bc84b84a747895cf75eed2d783f40d4faca2bef251fddd/pyfastchem-2.0.tar.gz 2023-09-16T07:01:53,304 Removed pyfastchem==2.0 from https://files.pythonhosted.org/packages/bc/10/2ca5b5cd6b8294bc84b84a747895cf75eed2d783f40d4faca2bef251fddd/pyfastchem-2.0.tar.gz from build tracker '/tmp/pip-build-tracker-w09t812k' 2023-09-16T07:01:53,307 Created temporary directory: /tmp/pip-unpack-k0f_9jel 2023-09-16T07:01:53,308 Created temporary directory: /tmp/pip-unpack-tivx4hi6 2023-09-16T07:01:53,310 Building wheels for collected packages: pyfastchem 2023-09-16T07:01:53,314 Created temporary directory: /tmp/pip-wheel-j46o8ztv 2023-09-16T07:01:53,314 Destination directory: /tmp/pip-wheel-j46o8ztv 2023-09-16T07:01:53,317 Building wheel for pyfastchem (pyproject.toml): started 2023-09-16T07:01:53,318 Running command Building wheel for pyfastchem (pyproject.toml) 2023-09-16T07:01:53,874 running bdist_wheel 2023-09-16T07:01:53,911 running build 2023-09-16T07:01:53,911 running build_ext 2023-09-16T07:01:53,917 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c flagcheck.cpp -o flagcheck.o -std=c++17 2023-09-16T07:01:54,001 building 'pyfastchem' extension 2023-09-16T07:01:54,002 creating build 2023-09-16T07:01:54,002 creating build/temp.linux-armv7l-cpython-311 2023-09-16T07:01:54,003 creating build/temp.linux-armv7l-cpython-311/fastchem_src 2023-09-16T07:01:54,005 creating build/temp.linux-armv7l-cpython-311/model_src 2023-09-16T07:01:54,005 creating build/temp.linux-armv7l-cpython-311/python 2023-09-16T07:01:54,006 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-7bncoj59/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c fastchem_src/calc_densities.cpp -o build/temp.linux-armv7l-cpython-311/fastchem_src/calc_densities.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T07:01:57,537 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-7bncoj59/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c fastchem_src/calc_electron_densities.cpp -o build/temp.linux-armv7l-cpython-311/fastchem_src/calc_electron_densities.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T07:02:00,334 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-7bncoj59/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c fastchem_src/calc_mean_mol_weight.cpp -o build/temp.linux-armv7l-cpython-311/fastchem_src/calc_mean_mol_weight.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T07:02:02,527 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-7bncoj59/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c fastchem_src/calc_species_densities.cpp -o build/temp.linux-armv7l-cpython-311/fastchem_src/calc_species_densities.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T07:02:05,240 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-7bncoj59/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c fastchem_src/check.cpp -o build/temp.linux-armv7l-cpython-311/fastchem_src/check.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T07:02:07,190 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-7bncoj59/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c fastchem_src/fastchem.cpp -o build/temp.linux-armv7l-cpython-311/fastchem_src/fastchem.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T07:02:13,105 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-7bncoj59/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c fastchem_src/get.cpp -o build/temp.linux-armv7l-cpython-311/fastchem_src/get.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T07:02:15,866 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-7bncoj59/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c fastchem_src/init.cpp -o build/temp.linux-armv7l-cpython-311/fastchem_src/init.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T07:02:16,507 fastchem_src/init.cpp:68:5: warning: floating constant truncated to zero [-Woverflow] 2023-09-16T07:02:16,508 68 | options.element_density_minlimit = 1e-512L; 2023-09-16T07:02:16,508 | ^~~~~~~ 2023-09-16T07:02:16,509 fastchem_src/init.cpp:69:5: warning: floating constant truncated to zero [-Woverflow] 2023-09-16T07:02:16,510 69 | options.molecule_density_minlimit = 1e-512L; 2023-09-16T07:02:16,511 | ^~~~~~~ 2023-09-16T07:02:23,326 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-7bncoj59/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c fastchem_src/init_add_species.cpp -o build/temp.linux-armv7l-cpython-311/fastchem_src/init_add_species.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T07:02:27,424 In file included from /usr/include/c++/12/vector:70, 2023-09-16T07:02:27,425 from fastchem_src/fastchem.h:24, 2023-09-16T07:02:27,425 from fastchem_src/init_add_species.cpp:21: 2023-09-16T07:02:27,426 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const fastchem::Molecule&}; _Tp = fastchem::Molecule; _Alloc = std::allocator >]’: 2023-09-16T07:02:27,427 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ changed in GCC 7.1 2023-09-16T07:02:27,427 439 | vector<_Tp, _Alloc>:: 2023-09-16T07:02:27,428 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T07:02:27,613 In file included from /usr/include/c++/12/vector:64: 2023-09-16T07:02:27,614 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = fastchem::Molecule; _Alloc = std::allocator >]’, 2023-09-16T07:02:27,614 inlined from ‘void fastchem::FastChem::addMolecule(std::string, std::string, std::vector >, std::vector, std::vector, int) [with double_type = double]’ at fastchem_src/init_add_species.cpp:128:24: 2023-09-16T07:02:27,616 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2023-09-16T07:02:27,616 1287 | _M_realloc_insert(end(), __x); 2023-09-16T07:02:27,617 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T07:02:27,907 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const fastchem::Element&}; _Tp = fastchem::Element; _Alloc = std::allocator >]’: 2023-09-16T07:02:27,908 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ changed in GCC 7.1 2023-09-16T07:02:27,908 439 | vector<_Tp, _Alloc>:: 2023-09-16T07:02:27,909 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T07:02:28,032 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = fastchem::Element; _Alloc = std::allocator >]’, 2023-09-16T07:02:28,033 inlined from ‘void fastchem::FastChem::addAtom(std::string) [with double_type = double]’ at fastchem_src/init_add_species.cpp:55:23: 2023-09-16T07:02:28,034 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2023-09-16T07:02:28,035 1287 | _M_realloc_insert(end(), __x); 2023-09-16T07:02:28,035 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T07:02:28,243 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const fastchem::Molecule&}; _Tp = fastchem::Molecule; _Alloc = std::allocator >]’: 2023-09-16T07:02:28,244 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ changed in GCC 7.1 2023-09-16T07:02:28,245 439 | vector<_Tp, _Alloc>:: 2023-09-16T07:02:28,245 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T07:02:28,393 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = fastchem::Molecule; _Alloc = std::allocator >]’, 2023-09-16T07:02:28,394 inlined from ‘void fastchem::FastChem::addMolecule(std::string, std::string, std::vector >, std::vector, std::vector, int) [with double_type = long double]’ at fastchem_src/init_add_species.cpp:128:24: 2023-09-16T07:02:28,395 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2023-09-16T07:02:28,395 1287 | _M_realloc_insert(end(), __x); 2023-09-16T07:02:28,396 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T07:02:28,681 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const fastchem::Element&}; _Tp = fastchem::Element; _Alloc = std::allocator >]’: 2023-09-16T07:02:28,682 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ changed in GCC 7.1 2023-09-16T07:02:28,683 439 | vector<_Tp, _Alloc>:: 2023-09-16T07:02:28,684 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T07:02:28,804 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = fastchem::Element; _Alloc = std::allocator >]’, 2023-09-16T07:02:28,805 inlined from ‘void fastchem::FastChem::addAtom(std::string) [with double_type = long double]’ at fastchem_src/init_add_species.cpp:55:23: 2023-09-16T07:02:28,805 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 2023-09-16T07:02:28,806 1287 | _M_realloc_insert(end(), __x); 2023-09-16T07:02:28,806 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T07:02:28,979 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-7bncoj59/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c fastchem_src/init_read_files.cpp -o build/temp.linux-armv7l-cpython-311/fastchem_src/init_read_files.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T07:02:34,729 In file included from /usr/include/c++/12/vector:70, 2023-09-16T07:02:34,729 from fastchem_src/fastchem.h:24, 2023-09-16T07:02:34,729 from fastchem_src/init_read_files.cpp:21: 2023-09-16T07:02:34,730 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2023-09-16T07:02:34,731 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T07:02:34,732 439 | vector<_Tp, _Alloc>:: 2023-09-16T07:02:34,732 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T07:02:35,045 In file included from /usr/include/c++/12/vector:64: 2023-09-16T07:02:35,046 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-16T07:02:35,047 inlined from ‘bool fastchem::FastChem::readSpeciesData() [with double_type = double]’ at fastchem_src/init_read_files.cpp:154:34: 2023-09-16T07:02:35,047 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T07:02:35,048 1287 | _M_realloc_insert(end(), __x); 2023-09-16T07:02:35,049 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T07:02:35,463 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {long double}; _Tp = long double; _Alloc = std::allocator]’: 2023-09-16T07:02:35,464 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2023-09-16T07:02:35,465 439 | vector<_Tp, _Alloc>:: 2023-09-16T07:02:35,465 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T07:02:35,743 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long double}; _Tp = long double; _Alloc = std::allocator]’, 2023-09-16T07:02:35,743 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = long double; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-16T07:02:35,744 inlined from ‘bool fastchem::FastChem::readSpeciesData() [with double_type = long double]’ at fastchem_src/init_read_files.cpp:154:34: 2023-09-16T07:02:35,745 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2023-09-16T07:02:35,745 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T07:02:35,746 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T07:02:36,185 /usr/include/c++/12/bits/stl_vector.h: In constructor ‘std::vector<_Tp, _Alloc>::vector(std::initializer_list<_Tp>, const allocator_type&) [with _Tp = fastchem::ChemicalElementData; _Alloc = std::allocator]’: 2023-09-16T07:02:36,186 /usr/include/c++/12/bits/stl_vector.h:673:7: note: parameter passing for argument of type ‘std::initializer_list’ changed in GCC 7.1 2023-09-16T07:02:36,186 673 | vector(initializer_list __l, 2023-09-16T07:02:36,187 | ^~~~~~ 2023-09-16T07:02:36,425 In file included from fastchem_src/init_read_files.cpp:22: 2023-09-16T07:02:36,425 fastchem_src/chemical_element_data.h: In function ‘void __static_initialization_and_destruction_0(int, int)’: 2023-09-16T07:02:36,426 fastchem_src/chemical_element_data.h:118:70: note: parameter passing for argument of type ‘std::initializer_list’ changed in GCC 7.1 2023-09-16T07:02:36,426 118 | }; 2023-09-16T07:02:36,427 | ^ 2023-09-16T07:02:37,132 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const fastchem::ChemicalElementData&}; _Tp = fastchem::ChemicalElementData; _Alloc = std::allocator]’: 2023-09-16T07:02:37,142 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T07:02:37,259 439 | vector<_Tp, _Alloc>:: 2023-09-16T07:02:37,282 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T07:02:37,429 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = fastchem::ChemicalElementData; _Alloc = std::allocator]’, 2023-09-16T07:02:37,474 inlined from ‘bool fastchem::FastChem::readElementList() [with double_type = long double]’ at fastchem_src/init_read_files.cpp:76:36: 2023-09-16T07:02:37,475 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T07:02:37,475 1287 | _M_realloc_insert(end(), __x); 2023-09-16T07:02:37,476 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T07:02:37,590 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = fastchem::ChemicalElementData; _Alloc = std::allocator]’, 2023-09-16T07:02:37,590 inlined from ‘bool fastchem::FastChem::readElementList() [with double_type = double]’ at fastchem_src/init_read_files.cpp:76:36: 2023-09-16T07:02:37,591 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T07:02:37,592 1287 | _M_realloc_insert(end(), __x); 2023-09-16T07:02:37,593 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T07:02:37,877 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-7bncoj59/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c fastchem_src/init_solver.cpp -o build/temp.linux-armv7l-cpython-311/fastchem_src/init_solver.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T07:02:41,826 fastchem_src/init_solver.cpp: In instantiation of ‘unsigned int fastchem::FastChem::determineSolverOrder(const fastchem::Element&) [with double_type = double]’: 2023-09-16T07:02:41,827 fastchem_src/init_solver.cpp:107:16: required from here 2023-09-16T07:02:41,828 fastchem_src/init_solver.cpp:67:71: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 2023-09-16T07:02:41,828 67 | if (std::abs(molecules[i].stoichiometric_vector[species.index]) > solver_order) 2023-09-16T07:02:41,829 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ 2023-09-16T07:02:41,846 fastchem_src/init_solver.cpp: In instantiation of ‘unsigned int fastchem::FastChem::determineSolverOrder(const fastchem::Element&) [with double_type = long double]’: 2023-09-16T07:02:41,846 fastchem_src/init_solver.cpp:108:16: required from here 2023-09-16T07:02:41,847 fastchem_src/init_solver.cpp:67:71: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 2023-09-16T07:02:43,903 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-7bncoj59/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c fastchem_src/mass_action_constant.cpp -o build/temp.linux-armv7l-cpython-311/fastchem_src/mass_action_constant.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T07:02:48,348 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-7bncoj59/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c fastchem_src/options_read_files.cpp -o build/temp.linux-armv7l-cpython-311/fastchem_src/options_read_files.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T07:02:51,213 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-7bncoj59/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c fastchem_src/set.cpp -o build/temp.linux-armv7l-cpython-311/fastchem_src/set.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T07:02:53,031 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-7bncoj59/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c fastchem_src/solve_fastchem.cpp -o build/temp.linux-armv7l-cpython-311/fastchem_src/solve_fastchem.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T07:02:56,015 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-7bncoj59/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c fastchem_src/solver.cpp -o build/temp.linux-armv7l-cpython-311/fastchem_src/solver.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T07:02:58,320 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-7bncoj59/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c fastchem_src/solver_bisection.cpp -o build/temp.linux-armv7l-cpython-311/fastchem_src/solver_bisection.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T07:03:01,391 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-7bncoj59/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c fastchem_src/solver_coeff.cpp -o build/temp.linux-armv7l-cpython-311/fastchem_src/solver_coeff.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T07:03:04,261 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-7bncoj59/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c fastchem_src/solver_linsol_quadsol.cpp -o build/temp.linux-armv7l-cpython-311/fastchem_src/solver_linsol_quadsol.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T07:03:04,588 fastchem_src/solver_linsol_quadsol.cpp:81:3: warning: floating constant truncated to zero [-Woverflow] 2023-09-16T07:03:04,588 81 | if (A2<1.e-4900L) 2023-09-16T07:03:04,589 | ^~ 2023-09-16T07:03:06,683 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-7bncoj59/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c fastchem_src/solver_nelder_mead_electron.cpp -o build/temp.linux-armv7l-cpython-311/fastchem_src/solver_nelder_mead_electron.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T07:03:09,619 In file included from /usr/include/c++/12/vector:70, 2023-09-16T07:03:09,619 from fastchem_src/solver.h:24, 2023-09-16T07:03:09,620 from fastchem_src/solver_nelder_mead_electron.cpp:21: 2023-09-16T07:03:09,621 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2023-09-16T07:03:09,621 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2023-09-16T07:03:09,622 439 | vector<_Tp, _Alloc>:: 2023-09-16T07:03:09,623 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T07:03:09,806 In file included from /usr/include/c++/12/vector:64: 2023-09-16T07:03:09,807 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-16T07:03:09,808 inlined from ‘bool fastchem::FastChemSolver::nelderMeadSolveElectron(fastchem::Element&, std::vector >&, const std::vector >&, double_type, double) [with double_type = double]’ at fastchem_src/solver_nelder_mead_electron.cpp:88:14: 2023-09-16T07:03:09,808 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2023-09-16T07:03:09,809 1287 | _M_realloc_insert(end(), __x); 2023-09-16T07:03:09,810 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T07:03:09,810 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-16T07:03:09,811 inlined from ‘bool fastchem::FastChemSolver::nelderMeadSolveElectron(fastchem::Element&, std::vector >&, const std::vector >&, double_type, double) [with double_type = double]’ at fastchem_src/solver_nelder_mead_electron.cpp:90:14: 2023-09-16T07:03:09,812 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2023-09-16T07:03:09,813 1287 | _M_realloc_insert(end(), __x); 2023-09-16T07:03:09,814 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T07:03:09,987 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const long double&}; _Tp = long double; _Alloc = std::allocator]’: 2023-09-16T07:03:09,988 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2023-09-16T07:03:09,989 439 | vector<_Tp, _Alloc>:: 2023-09-16T07:03:09,989 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T07:03:10,173 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long double; _Alloc = std::allocator]’, 2023-09-16T07:03:10,174 inlined from ‘bool fastchem::FastChemSolver::nelderMeadSolveElectron(fastchem::Element&, std::vector >&, const std::vector >&, double_type, double) [with double_type = long double]’ at fastchem_src/solver_nelder_mead_electron.cpp:88:14: 2023-09-16T07:03:10,174 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2023-09-16T07:03:10,175 1287 | _M_realloc_insert(end(), __x); 2023-09-16T07:03:10,176 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T07:03:10,176 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long double; _Alloc = std::allocator]’, 2023-09-16T07:03:10,177 inlined from ‘bool fastchem::FastChemSolver::nelderMeadSolveElectron(fastchem::Element&, std::vector >&, const std::vector >&, double_type, double) [with double_type = long double]’ at fastchem_src/solver_nelder_mead_electron.cpp:90:14: 2023-09-16T07:03:10,178 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2023-09-16T07:03:10,178 1287 | _M_realloc_insert(end(), __x); 2023-09-16T07:03:10,179 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T07:03:10,449 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-7bncoj59/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c fastchem_src/solver_newtsol.cpp -o build/temp.linux-armv7l-cpython-311/fastchem_src/solver_newtsol.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T07:03:13,828 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-7bncoj59/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c fastchem_src/species_struct.cpp -o build/temp.linux-armv7l-cpython-311/fastchem_src/species_struct.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T07:03:15,805 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-7bncoj59/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c model_src/model_main.cpp -o build/temp.linux-armv7l-cpython-311/model_src/model_main.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T07:03:20,724 In file included from /usr/include/c++/12/vector:70, 2023-09-16T07:03:20,724 from model_src/../fastchem_src/fastchem.h:24, 2023-09-16T07:03:20,725 from model_src/model_main.cpp:20: 2023-09-16T07:03:20,726 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2023-09-16T07:03:20,726 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T07:03:20,727 439 | vector<_Tp, _Alloc>:: 2023-09-16T07:03:20,727 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T07:03:21,414 In file included from /usr/include/c++/12/vector:64: 2023-09-16T07:03:21,414 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-16T07:03:21,415 inlined from ‘int main(int, char**)’ at model_src/model_main.cpp:94:23: 2023-09-16T07:03:21,416 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T07:03:21,416 1287 | _M_realloc_insert(end(), __x); 2023-09-16T07:03:21,417 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T07:03:21,417 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-16T07:03:21,418 inlined from ‘int main(int, char**)’ at model_src/model_main.cpp:95:26: 2023-09-16T07:03:21,418 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T07:03:21,419 1287 | _M_realloc_insert(end(), __x); 2023-09-16T07:03:21,419 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T07:03:21,747 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-7bncoj59/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c python/fastchem_python_wrapper.cpp -o build/temp.linux-armv7l-cpython-311/python/fastchem_python_wrapper.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T07:03:48,149 In file included from /usr/include/c++/12/vector:70, 2023-09-16T07:03:48,150 from /tmp/pip-build-env-7bncoj59/overlay/local/lib/python3.11/dist-packages/pybind11/include/pybind11/detail/../detail/common.h:314, 2023-09-16T07:03:48,150 from /tmp/pip-build-env-7bncoj59/overlay/local/lib/python3.11/dist-packages/pybind11/include/pybind11/detail/../attr.h:13, 2023-09-16T07:03:48,151 from /tmp/pip-build-env-7bncoj59/overlay/local/lib/python3.11/dist-packages/pybind11/include/pybind11/detail/class.h:12, 2023-09-16T07:03:48,151 from /tmp/pip-build-env-7bncoj59/overlay/local/lib/python3.11/dist-packages/pybind11/include/pybind11/pybind11.h:13, 2023-09-16T07:03:48,152 from python/fastchem_python_wrapper.cpp:1: 2023-09-16T07:03:48,153 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2023-09-16T07:03:48,153 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T07:03:48,154 439 | vector<_Tp, _Alloc>:: 2023-09-16T07:03:48,154 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T07:03:48,221 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, 2023-09-16T07:03:48,222 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-16T07:03:48,222 inlined from ‘bool pybind11::detail::list_caster::load(pybind11::handle, bool) [with Type = std::vector; Value = double]’ at /tmp/pip-build-env-7bncoj59/overlay/local/lib/python3.11/dist-packages/pybind11/include/pybind11/stl.h:180:28: 2023-09-16T07:03:48,223 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T07:03:48,223 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T07:03:48,224 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T07:03:49,401 creating build/lib.linux-armv7l-cpython-311 2023-09-16T07:03:49,403 arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/fastchem_src/calc_densities.o build/temp.linux-armv7l-cpython-311/fastchem_src/calc_electron_densities.o build/temp.linux-armv7l-cpython-311/fastchem_src/calc_mean_mol_weight.o build/temp.linux-armv7l-cpython-311/fastchem_src/calc_species_densities.o build/temp.linux-armv7l-cpython-311/fastchem_src/check.o build/temp.linux-armv7l-cpython-311/fastchem_src/fastchem.o build/temp.linux-armv7l-cpython-311/fastchem_src/get.o build/temp.linux-armv7l-cpython-311/fastchem_src/init.o build/temp.linux-armv7l-cpython-311/fastchem_src/init_add_species.o build/temp.linux-armv7l-cpython-311/fastchem_src/init_read_files.o build/temp.linux-armv7l-cpython-311/fastchem_src/init_solver.o build/temp.linux-armv7l-cpython-311/fastchem_src/mass_action_constant.o build/temp.linux-armv7l-cpython-311/fastchem_src/options_read_files.o build/temp.linux-armv7l-cpython-311/fastchem_src/set.o build/temp.linux-armv7l-cpython-311/fastchem_src/solve_fastchem.o build/temp.linux-armv7l-cpython-311/fastchem_src/solver.o build/temp.linux-armv7l-cpython-311/fastchem_src/solver_bisection.o build/temp.linux-armv7l-cpython-311/fastchem_src/solver_coeff.o build/temp.linux-armv7l-cpython-311/fastchem_src/solver_linsol_quadsol.o build/temp.linux-armv7l-cpython-311/fastchem_src/solver_nelder_mead_electron.o build/temp.linux-armv7l-cpython-311/fastchem_src/solver_newtsol.o build/temp.linux-armv7l-cpython-311/fastchem_src/species_struct.o build/temp.linux-armv7l-cpython-311/model_src/model_main.o build/temp.linux-armv7l-cpython-311/python/fastchem_python_wrapper.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/pyfastchem.cpython-311-arm-linux-gnueabihf.so 2023-09-16T07:03:49,765 installing to build/bdist.linux-armv7l/wheel 2023-09-16T07:03:49,766 running install 2023-09-16T07:03:49,790 running install_lib 2023-09-16T07:03:49,799 creating build/bdist.linux-armv7l 2023-09-16T07:03:49,800 creating build/bdist.linux-armv7l/wheel 2023-09-16T07:03:49,801 copying build/lib.linux-armv7l-cpython-311/pyfastchem.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel 2023-09-16T07:03:49,815 running install_egg_info 2023-09-16T07:03:49,828 running egg_info 2023-09-16T07:03:49,834 writing pyfastchem.egg-info/PKG-INFO 2023-09-16T07:03:49,837 writing dependency_links to pyfastchem.egg-info/dependency_links.txt 2023-09-16T07:03:49,838 writing top-level names to pyfastchem.egg-info/top_level.txt 2023-09-16T07:03:49,867 listing git files failed - pretending there aren't any 2023-09-16T07:03:49,870 reading manifest file 'pyfastchem.egg-info/SOURCES.txt' 2023-09-16T07:03:49,883 writing manifest file 'pyfastchem.egg-info/SOURCES.txt' 2023-09-16T07:03:49,885 Copying pyfastchem.egg-info to build/bdist.linux-armv7l/wheel/pyfastchem-2.0-py3.11.egg-info 2023-09-16T07:03:49,893 running install_scripts 2023-09-16T07:03:49,935 creating build/bdist.linux-armv7l/wheel/pyfastchem-2.0.dist-info/WHEEL 2023-09-16T07:03:49,938 creating '/tmp/pip-wheel-j46o8ztv/.tmp-dgkmuzfr/pyfastchem-2.0-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-09-16T07:03:50,020 adding 'pyfastchem.cpython-311-arm-linux-gnueabihf.so' 2023-09-16T07:03:50,025 adding 'pyfastchem-2.0.dist-info/METADATA' 2023-09-16T07:03:50,028 adding 'pyfastchem-2.0.dist-info/WHEEL' 2023-09-16T07:03:50,029 adding 'pyfastchem-2.0.dist-info/top_level.txt' 2023-09-16T07:03:50,030 adding 'pyfastchem-2.0.dist-info/RECORD' 2023-09-16T07:03:50,033 removing build/bdist.linux-armv7l/wheel 2023-09-16T07:03:50,128 Building wheel for pyfastchem (pyproject.toml): finished with status 'done' 2023-09-16T07:03:50,139 Created wheel for pyfastchem: filename=pyfastchem-2.0-cp311-cp311-linux_armv7l.whl size=173041 sha256=ae8d74a7960536689e04530882e2bce9d993e4501352f4e4b292eedac3c35b63 2023-09-16T07:03:50,141 Stored in directory: /tmp/pip-ephem-wheel-cache-nts3yyv8/wheels/b5/3b/0a/82920999ca2ec6ae6e4cf298423de3c7b0bb82a2a1d41fdb21 2023-09-16T07:03:50,150 Successfully built pyfastchem 2023-09-16T07:03:50,161 Removed build tracker: '/tmp/pip-build-tracker-w09t812k'