2023-09-16T14:56:13,839 Created temporary directory: /tmp/pip-build-tracker-9onb8i96
2023-09-16T14:56:13,840 Initialized build tracking at /tmp/pip-build-tracker-9onb8i96
2023-09-16T14:56:13,841 Created build tracker: /tmp/pip-build-tracker-9onb8i96
2023-09-16T14:56:13,841 Entered build tracker: /tmp/pip-build-tracker-9onb8i96
2023-09-16T14:56:13,842 Created temporary directory: /tmp/pip-wheel-5j_6058n
2023-09-16T14:56:13,845 Created temporary directory: /tmp/pip-ephem-wheel-cache-545j6a6q
2023-09-16T14:56:13,866 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-16T14:56:13,870 2 location(s) to search for versions of repair-seq:
2023-09-16T14:56:13,870 * https://pypi.org/simple/repair-seq/
2023-09-16T14:56:13,870 * https://www.piwheels.org/simple/repair-seq/
2023-09-16T14:56:13,871 Fetching project page and analyzing links: https://pypi.org/simple/repair-seq/
2023-09-16T14:56:13,872 Getting page https://pypi.org/simple/repair-seq/
2023-09-16T14:56:13,873 Found index url https://pypi.org/simple/
2023-09-16T14:56:14,120 Fetched page https://pypi.org/simple/repair-seq/ as application/vnd.pypi.simple.v1+json
2023-09-16T14:56:14,122   Found link https://files.pythonhosted.org/packages/c4/05/0451dabc5e138dfe012fe7aeb8080e24951f88bb079c213d7f3b8be08df0/repair_seq-1.0.2.tar.gz (from https://pypi.org/simple/repair-seq/) (requires-python:>=3.6), version: 1.0.2
2023-09-16T14:56:14,123   Found link https://files.pythonhosted.org/packages/91/2b/9a0f370071e707794de9e2647dcfa2f83a07d64dd750eb29cf8bce55e738/repair_seq-1.0.3.tar.gz (from https://pypi.org/simple/repair-seq/) (requires-python:>=3.7), version: 1.0.3
2023-09-16T14:56:14,124 Fetching project page and analyzing links: https://www.piwheels.org/simple/repair-seq/
2023-09-16T14:56:14,124 Getting page https://www.piwheels.org/simple/repair-seq/
2023-09-16T14:56:14,126 Found index url https://www.piwheels.org/simple/
2023-09-16T14:56:14,463 Fetched page https://www.piwheels.org/simple/repair-seq/ as text/html
2023-09-16T14:56:14,467   Skipping link: No binaries permitted for repair-seq: https://www.piwheels.org/simple/repair-seq/repair_seq-1.0.3-cp39-cp39-linux_armv7l.whl#sha256=137466bd1946aa68c800c7f1e2ee0c6c5eb2f172e64628e3369f7e887934eaab (from https://www.piwheels.org/simple/repair-seq/) (requires-python:>=3.7)
2023-09-16T14:56:14,468   Skipping link: No binaries permitted for repair-seq: https://www.piwheels.org/simple/repair-seq/repair_seq-1.0.3-cp39-cp39-linux_armv6l.whl#sha256=137466bd1946aa68c800c7f1e2ee0c6c5eb2f172e64628e3369f7e887934eaab (from https://www.piwheels.org/simple/repair-seq/) (requires-python:>=3.7)
2023-09-16T14:56:14,469   Skipping link: No binaries permitted for repair-seq: https://www.piwheels.org/simple/repair-seq/repair_seq-1.0.3-cp37-cp37m-linux_armv7l.whl#sha256=92ee99fae5831b1cbf0488ecf1a8c56e0e99518c95e27d34863ad531d7cdc6a6 (from https://www.piwheels.org/simple/repair-seq/) (requires-python:>=3.7)
2023-09-16T14:56:14,469   Skipping link: No binaries permitted for repair-seq: https://www.piwheels.org/simple/repair-seq/repair_seq-1.0.3-cp37-cp37m-linux_armv6l.whl#sha256=92ee99fae5831b1cbf0488ecf1a8c56e0e99518c95e27d34863ad531d7cdc6a6 (from https://www.piwheels.org/simple/repair-seq/) (requires-python:>=3.7)
2023-09-16T14:56:14,470   Skipping link: No binaries permitted for repair-seq: https://www.piwheels.org/simple/repair-seq/repair_seq-1.0.2-cp311-cp311-linux_armv7l.whl#sha256=03c64f1ef45924c2b649ff9b952e56aa42df6a1263672db1e9f80bf99f7d02b1 (from https://www.piwheels.org/simple/repair-seq/) (requires-python:>=3.6)
2023-09-16T14:56:14,471   Skipping link: No binaries permitted for repair-seq: https://www.piwheels.org/simple/repair-seq/repair_seq-1.0.2-cp311-cp311-linux_armv6l.whl#sha256=03c64f1ef45924c2b649ff9b952e56aa42df6a1263672db1e9f80bf99f7d02b1 (from https://www.piwheels.org/simple/repair-seq/) (requires-python:>=3.6)
2023-09-16T14:56:14,471   Skipping link: No binaries permitted for repair-seq: https://www.piwheels.org/simple/repair-seq/repair_seq-1.0.2-cp39-cp39-linux_armv7l.whl#sha256=77d8227261c96e181117919c2fc01cfd35b941c17c4588852e859c982c3c09aa (from https://www.piwheels.org/simple/repair-seq/) (requires-python:>=3.6)
2023-09-16T14:56:14,472   Skipping link: No binaries permitted for repair-seq: https://www.piwheels.org/simple/repair-seq/repair_seq-1.0.2-cp39-cp39-linux_armv6l.whl#sha256=77d8227261c96e181117919c2fc01cfd35b941c17c4588852e859c982c3c09aa (from https://www.piwheels.org/simple/repair-seq/) (requires-python:>=3.6)
2023-09-16T14:56:14,472   Skipping link: No binaries permitted for repair-seq: https://www.piwheels.org/simple/repair-seq/repair_seq-1.0.2-cp37-cp37m-linux_armv7l.whl#sha256=3234e29f279366df4210cdd49f2c59263c1fc2e1284cb0f4eb70e91d6dfc0797 (from https://www.piwheels.org/simple/repair-seq/) (requires-python:>=3.6)
2023-09-16T14:56:14,473   Skipping link: No binaries permitted for repair-seq: https://www.piwheels.org/simple/repair-seq/repair_seq-1.0.2-cp37-cp37m-linux_armv6l.whl#sha256=3234e29f279366df4210cdd49f2c59263c1fc2e1284cb0f4eb70e91d6dfc0797 (from https://www.piwheels.org/simple/repair-seq/) (requires-python:>=3.6)
2023-09-16T14:56:14,473 Skipping link: not a file: https://www.piwheels.org/simple/repair-seq/
2023-09-16T14:56:14,474 Skipping link: not a file: https://pypi.org/simple/repair-seq/
2023-09-16T14:56:14,496 Given no hashes to check 1 links for project 'repair-seq': discarding no candidates
2023-09-16T14:56:14,522 Collecting repair-seq==1.0.3
2023-09-16T14:56:14,525   Created temporary directory: /tmp/pip-unpack-yi4tz80p
2023-09-16T14:56:14,763   Downloading repair_seq-1.0.3.tar.gz (1.4 MB)
2023-09-16T14:56:15,623   Added repair-seq==1.0.3 from https://files.pythonhosted.org/packages/91/2b/9a0f370071e707794de9e2647dcfa2f83a07d64dd750eb29cf8bce55e738/repair_seq-1.0.3.tar.gz to build tracker '/tmp/pip-build-tracker-9onb8i96'
2023-09-16T14:56:15,625   Running setup.py (path:/tmp/pip-wheel-5j_6058n/repair-seq_65454f8ba70c40e9a869ce71b8651f58/setup.py) egg_info for package repair-seq
2023-09-16T14:56:15,626   Created temporary directory: /tmp/pip-pip-egg-info-nqptigw1
2023-09-16T14:56:15,626   Preparing metadata (setup.py): started
2023-09-16T14:56:15,628   Running command python setup.py egg_info
2023-09-16T14:56:16,303   /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:80: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated.
2023-09-16T14:56:16,303   !!

2023-09-16T14:56:16,305           ********************************************************************************
2023-09-16T14:56:16,305           Requirements should be satisfied by a PEP 517 installer.
2023-09-16T14:56:16,306           If you are using pip, you can try `pip install --use-pep517`.
2023-09-16T14:56:16,307           ********************************************************************************

2023-09-16T14:56:16,308   !!
2023-09-16T14:56:16,308     dist.fetch_build_eggs(dist.setup_requires)
2023-09-16T14:56:16,867   running egg_info
2023-09-16T14:56:16,868   creating /tmp/pip-pip-egg-info-nqptigw1/repair_seq.egg-info
2023-09-16T14:56:16,892   writing /tmp/pip-pip-egg-info-nqptigw1/repair_seq.egg-info/PKG-INFO
2023-09-16T14:56:16,899   writing dependency_links to /tmp/pip-pip-egg-info-nqptigw1/repair_seq.egg-info/dependency_links.txt
2023-09-16T14:56:16,905   writing requirements to /tmp/pip-pip-egg-info-nqptigw1/repair_seq.egg-info/requires.txt
2023-09-16T14:56:16,908   writing top-level names to /tmp/pip-pip-egg-info-nqptigw1/repair_seq.egg-info/top_level.txt
2023-09-16T14:56:16,912   writing manifest file '/tmp/pip-pip-egg-info-nqptigw1/repair_seq.egg-info/SOURCES.txt'
2023-09-16T14:56:17,259   reading manifest file '/tmp/pip-pip-egg-info-nqptigw1/repair_seq.egg-info/SOURCES.txt'
2023-09-16T14:56:17,263   writing manifest file '/tmp/pip-pip-egg-info-nqptigw1/repair_seq.egg-info/SOURCES.txt'
2023-09-16T14:56:17,372   Preparing metadata (setup.py): finished with status 'done'
2023-09-16T14:56:17,376   Source in /tmp/pip-wheel-5j_6058n/repair-seq_65454f8ba70c40e9a869ce71b8651f58 has version 1.0.3, which satisfies requirement repair-seq==1.0.3 from https://files.pythonhosted.org/packages/91/2b/9a0f370071e707794de9e2647dcfa2f83a07d64dd750eb29cf8bce55e738/repair_seq-1.0.3.tar.gz
2023-09-16T14:56:17,377   Removed repair-seq==1.0.3 from https://files.pythonhosted.org/packages/91/2b/9a0f370071e707794de9e2647dcfa2f83a07d64dd750eb29cf8bce55e738/repair_seq-1.0.3.tar.gz from build tracker '/tmp/pip-build-tracker-9onb8i96'
2023-09-16T14:56:17,383 Created temporary directory: /tmp/pip-unpack-rvwxmk4v
2023-09-16T14:56:17,384 Created temporary directory: /tmp/pip-unpack-wdq08mml
2023-09-16T14:56:17,395 Building wheels for collected packages: repair-seq
2023-09-16T14:56:17,399   Created temporary directory: /tmp/pip-wheel-55t1h_9c
2023-09-16T14:56:17,400   Building wheel for repair-seq (setup.py): started
2023-09-16T14:56:17,401   Destination directory: /tmp/pip-wheel-55t1h_9c
2023-09-16T14:56:17,401   Running command python setup.py bdist_wheel
2023-09-16T14:56:18,285   /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:80: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated.
2023-09-16T14:56:18,285   !!

2023-09-16T14:56:18,286           ********************************************************************************
2023-09-16T14:56:18,286           Requirements should be satisfied by a PEP 517 installer.
2023-09-16T14:56:18,287           If you are using pip, you can try `pip install --use-pep517`.
2023-09-16T14:56:18,287           ********************************************************************************

2023-09-16T14:56:18,288   !!
2023-09-16T14:56:18,289     dist.fetch_build_eggs(dist.setup_requires)
2023-09-16T14:56:18,613   running bdist_wheel
2023-09-16T14:56:18,704   running build
2023-09-16T14:56:18,704   running build_py
2023-09-16T14:56:18,730   creating build
2023-09-16T14:56:18,731   creating build/lib.linux-armv7l-cpython-311
2023-09-16T14:56:18,736   creating build/lib.linux-armv7l-cpython-311/repair_seq
2023-09-16T14:56:18,737   copying repair_seq/paired_end_experiment.py -> build/lib.linux-armv7l-cpython-311/repair_seq
2023-09-16T14:56:18,739   copying repair_seq/common_sequences.py -> build/lib.linux-armv7l-cpython-311/repair_seq
2023-09-16T14:56:18,740   copying repair_seq/demux_gDNA.py -> build/lib.linux-armv7l-cpython-311/repair_seq
2023-09-16T14:56:18,743   copying repair_seq/experiment_group.py -> build/lib.linux-armv7l-cpython-311/repair_seq
2023-09-16T14:56:18,745   copying repair_seq/prime_editing_experiment.py -> build/lib.linux-armv7l-cpython-311/repair_seq
2023-09-16T14:56:18,748   copying repair_seq/guide_library.py -> build/lib.linux-armv7l-cpython-311/repair_seq
2023-09-16T14:56:18,750   copying repair_seq/prime_editing_layout.py -> build/lib.linux-armv7l-cpython-311/repair_seq
2023-09-16T14:56:18,753   copying repair_seq/demux.py -> build/lib.linux-armv7l-cpython-311/repair_seq
2023-09-16T14:56:18,755   copying repair_seq/replicates.py -> build/lib.linux-armv7l-cpython-311/repair_seq
2023-09-16T14:56:18,758   copying repair_seq/arrayed_experiment_group.py -> build/lib.linux-armv7l-cpython-311/repair_seq
2023-09-16T14:56:18,760   copying repair_seq/single_end_experiment.py -> build/lib.linux-armv7l-cpython-311/repair_seq
2023-09-16T14:56:18,762   copying repair_seq/pooled_screen.py -> build/lib.linux-armv7l-cpython-311/repair_seq
2023-09-16T14:56:18,767   copying repair_seq/coherence.py -> build/lib.linux-armv7l-cpython-311/repair_seq
2023-09-16T14:56:18,769   copying repair_seq/convert_outcomes.py -> build/lib.linux-armv7l-cpython-311/repair_seq
2023-09-16T14:56:18,771   copying repair_seq/demux_arrayed_experiments.py -> build/lib.linux-armv7l-cpython-311/repair_seq
2023-09-16T14:56:18,773   copying repair_seq/collapse.py -> build/lib.linux-armv7l-cpython-311/repair_seq
2023-09-16T14:56:18,775   copying repair_seq/cluster.py -> build/lib.linux-armv7l-cpython-311/repair_seq
2023-09-16T14:56:18,778   copying repair_seq/twin_prime_layout.py -> build/lib.linux-armv7l-cpython-311/repair_seq
2023-09-16T14:56:18,781   copying repair_seq/build_guide_specific_targets.py -> build/lib.linux-armv7l-cpython-311/repair_seq
2023-09-16T14:56:18,783   copying repair_seq/perturb_seq.py -> build/lib.linux-armv7l-cpython-311/repair_seq
2023-09-16T14:56:18,785   copying repair_seq/quantiles.py -> build/lib.linux-armv7l-cpython-311/repair_seq
2023-09-16T14:56:18,788   copying repair_seq/pooled_layout.py -> build/lib.linux-armv7l-cpython-311/repair_seq
2023-09-16T14:56:18,792   copying repair_seq/statistics.py -> build/lib.linux-armv7l-cpython-311/repair_seq
2023-09-16T14:56:18,793   copying repair_seq/bootstrapper.py -> build/lib.linux-armv7l-cpython-311/repair_seq
2023-09-16T14:56:18,795   copying repair_seq/__init__.py -> build/lib.linux-armv7l-cpython-311/repair_seq
2023-09-16T14:56:18,797   copying repair_seq/demux_for_SRA.py -> build/lib.linux-armv7l-cpython-311/repair_seq
2023-09-16T14:56:18,799   copying repair_seq/base_editor.py -> build/lib.linux-armv7l-cpython-311/repair_seq
2023-09-16T14:56:18,800   copying repair_seq/beta_binomial.py -> build/lib.linux-armv7l-cpython-311/repair_seq
2023-09-16T14:56:18,803   creating build/lib.linux-armv7l-cpython-311/repair_seq/visualize
2023-09-16T14:56:18,804   copying repair_seq/visualize/scratch.py -> build/lib.linux-armv7l-cpython-311/repair_seq/visualize
2023-09-16T14:56:18,807   copying repair_seq/visualize/volcano.py -> build/lib.linux-armv7l-cpython-311/repair_seq/visualize
2023-09-16T14:56:18,809   copying repair_seq/visualize/outcome_diagrams.py -> build/lib.linux-armv7l-cpython-311/repair_seq/visualize
2023-09-16T14:56:18,812   copying repair_seq/visualize/gene_significance.py -> build/lib.linux-armv7l-cpython-311/repair_seq/visualize
2023-09-16T14:56:18,814   copying repair_seq/visualize/heatmap.py -> build/lib.linux-armv7l-cpython-311/repair_seq/visualize
2023-09-16T14:56:18,817   copying repair_seq/visualize/templated_insertions.py -> build/lib.linux-armv7l-cpython-311/repair_seq/visualize
2023-09-16T14:56:18,819   copying repair_seq/visualize/__init__.py -> build/lib.linux-armv7l-cpython-311/repair_seq/visualize
2023-09-16T14:56:18,822   copying repair_seq/visualize/scatter.py -> build/lib.linux-armv7l-cpython-311/repair_seq/visualize
2023-09-16T14:56:18,824   copying repair_seq/visualize/clustermap.py -> build/lib.linux-armv7l-cpython-311/repair_seq/visualize
2023-09-16T14:56:18,827   copying repair_seq/visualize/conversion_tracts.py -> build/lib.linux-armv7l-cpython-311/repair_seq/visualize
2023-09-16T14:56:18,830   creating build/lib.linux-armv7l-cpython-311/repair_seq/test
2023-09-16T14:56:18,831   copying repair_seq/test/build_read_sets.py -> build/lib.linux-armv7l-cpython-311/repair_seq/test
2023-09-16T14:56:18,833   copying repair_seq/test/test_pegRNAs.py -> build/lib.linux-armv7l-cpython-311/repair_seq/test
2023-09-16T14:56:18,835   copying repair_seq/test/test_read_sets.py -> build/lib.linux-armv7l-cpython-311/repair_seq/test
2023-09-16T14:56:18,839   running build_ext
2023-09-16T14:56:19,349   Compiling repair_seq/collapse_cython.pyx because it changed.
2023-09-16T14:56:19,350   [1/1] Cythonizing repair_seq/collapse_cython.pyx
2023-09-16T14:56:23,466   building 'collapse_cython' extension
2023-09-16T14:56:23,467   creating build/temp.linux-armv7l-cpython-311
2023-09-16T14:56:23,467   creating build/temp.linux-armv7l-cpython-311/repair_seq
2023-09-16T14:56:23,468   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c repair_seq/collapse_cython.c -o build/temp.linux-armv7l-cpython-311/repair_seq/collapse_cython.o
2023-09-16T14:56:48,106   arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/repair_seq/collapse_cython.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/repair_seq/collapse_cython.cpython-311-arm-linux-gnueabihf.so
2023-09-16T14:56:48,246   running build_scripts
2023-09-16T14:56:48,247   creating build/scripts-3.11
2023-09-16T14:56:48,248   copying and adjusting repair_seq/repair-seq -> build/scripts-3.11
2023-09-16T14:56:48,249   changing mode of build/scripts-3.11/repair-seq from 644 to 755
2023-09-16T14:56:48,274   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2023-09-16T14:56:48,275   !!

2023-09-16T14:56:48,276           ********************************************************************************
2023-09-16T14:56:48,277           Please avoid running ``setup.py`` directly.
2023-09-16T14:56:48,277           Instead, use pypa/build, pypa/installer or other
2023-09-16T14:56:48,278           standards-based tools.

2023-09-16T14:56:48,278           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2023-09-16T14:56:48,279           ********************************************************************************

2023-09-16T14:56:48,280   !!
2023-09-16T14:56:48,280     self.initialize_options()
2023-09-16T14:56:48,299   installing to build/bdist.linux-armv7l/wheel
2023-09-16T14:56:48,299   running install
2023-09-16T14:56:48,324   running install_lib
2023-09-16T14:56:48,348   creating build/bdist.linux-armv7l
2023-09-16T14:56:48,349   creating build/bdist.linux-armv7l/wheel
2023-09-16T14:56:48,350   creating build/bdist.linux-armv7l/wheel/repair_seq
2023-09-16T14:56:48,351   copying build/lib.linux-armv7l-cpython-311/repair_seq/paired_end_experiment.py -> build/bdist.linux-armv7l/wheel/repair_seq
2023-09-16T14:56:48,353   copying build/lib.linux-armv7l-cpython-311/repair_seq/common_sequences.py -> build/bdist.linux-armv7l/wheel/repair_seq
2023-09-16T14:56:48,355   copying build/lib.linux-armv7l-cpython-311/repair_seq/demux_gDNA.py -> build/bdist.linux-armv7l/wheel/repair_seq
2023-09-16T14:56:48,358   copying build/lib.linux-armv7l-cpython-311/repair_seq/experiment_group.py -> build/bdist.linux-armv7l/wheel/repair_seq
2023-09-16T14:56:48,360   copying build/lib.linux-armv7l-cpython-311/repair_seq/prime_editing_experiment.py -> build/bdist.linux-armv7l/wheel/repair_seq
2023-09-16T14:56:48,362   copying build/lib.linux-armv7l-cpython-311/repair_seq/guide_library.py -> build/bdist.linux-armv7l/wheel/repair_seq
2023-09-16T14:56:48,365   copying build/lib.linux-armv7l-cpython-311/repair_seq/prime_editing_layout.py -> build/bdist.linux-armv7l/wheel/repair_seq
2023-09-16T14:56:48,368   copying build/lib.linux-armv7l-cpython-311/repair_seq/demux.py -> build/bdist.linux-armv7l/wheel/repair_seq
2023-09-16T14:56:48,371   copying build/lib.linux-armv7l-cpython-311/repair_seq/replicates.py -> build/bdist.linux-armv7l/wheel/repair_seq
2023-09-16T14:56:48,373   copying build/lib.linux-armv7l-cpython-311/repair_seq/arrayed_experiment_group.py -> build/bdist.linux-armv7l/wheel/repair_seq
2023-09-16T14:56:48,376   creating build/bdist.linux-armv7l/wheel/repair_seq/visualize
2023-09-16T14:56:48,377   copying build/lib.linux-armv7l-cpython-311/repair_seq/visualize/scratch.py -> build/bdist.linux-armv7l/wheel/repair_seq/visualize
2023-09-16T14:56:48,380   copying build/lib.linux-armv7l-cpython-311/repair_seq/visualize/volcano.py -> build/bdist.linux-armv7l/wheel/repair_seq/visualize
2023-09-16T14:56:48,382   copying build/lib.linux-armv7l-cpython-311/repair_seq/visualize/outcome_diagrams.py -> build/bdist.linux-armv7l/wheel/repair_seq/visualize
2023-09-16T14:56:48,385   copying build/lib.linux-armv7l-cpython-311/repair_seq/visualize/gene_significance.py -> build/bdist.linux-armv7l/wheel/repair_seq/visualize
2023-09-16T14:56:48,388   copying build/lib.linux-armv7l-cpython-311/repair_seq/visualize/heatmap.py -> build/bdist.linux-armv7l/wheel/repair_seq/visualize
2023-09-16T14:56:48,392   copying build/lib.linux-armv7l-cpython-311/repair_seq/visualize/templated_insertions.py -> build/bdist.linux-armv7l/wheel/repair_seq/visualize
2023-09-16T14:56:48,394   copying build/lib.linux-armv7l-cpython-311/repair_seq/visualize/__init__.py -> build/bdist.linux-armv7l/wheel/repair_seq/visualize
2023-09-16T14:56:48,396   copying build/lib.linux-armv7l-cpython-311/repair_seq/visualize/scatter.py -> build/bdist.linux-armv7l/wheel/repair_seq/visualize
2023-09-16T14:56:48,399   copying build/lib.linux-armv7l-cpython-311/repair_seq/visualize/clustermap.py -> build/bdist.linux-armv7l/wheel/repair_seq/visualize
2023-09-16T14:56:48,401   copying build/lib.linux-armv7l-cpython-311/repair_seq/visualize/conversion_tracts.py -> build/bdist.linux-armv7l/wheel/repair_seq/visualize
2023-09-16T14:56:48,404   copying build/lib.linux-armv7l-cpython-311/repair_seq/single_end_experiment.py -> build/bdist.linux-armv7l/wheel/repair_seq
2023-09-16T14:56:48,406   copying build/lib.linux-armv7l-cpython-311/repair_seq/pooled_screen.py -> build/bdist.linux-armv7l/wheel/repair_seq
2023-09-16T14:56:48,410   copying build/lib.linux-armv7l-cpython-311/repair_seq/coherence.py -> build/bdist.linux-armv7l/wheel/repair_seq
2023-09-16T14:56:48,412   copying build/lib.linux-armv7l-cpython-311/repair_seq/convert_outcomes.py -> build/bdist.linux-armv7l/wheel/repair_seq
2023-09-16T14:56:48,414   copying build/lib.linux-armv7l-cpython-311/repair_seq/demux_arrayed_experiments.py -> build/bdist.linux-armv7l/wheel/repair_seq
2023-09-16T14:56:48,416   creating build/bdist.linux-armv7l/wheel/repair_seq/test
2023-09-16T14:56:48,417   copying build/lib.linux-armv7l-cpython-311/repair_seq/test/build_read_sets.py -> build/bdist.linux-armv7l/wheel/repair_seq/test
2023-09-16T14:56:48,419   copying build/lib.linux-armv7l-cpython-311/repair_seq/test/test_pegRNAs.py -> build/bdist.linux-armv7l/wheel/repair_seq/test
2023-09-16T14:56:48,420   copying build/lib.linux-armv7l-cpython-311/repair_seq/test/test_read_sets.py -> build/bdist.linux-armv7l/wheel/repair_seq/test
2023-09-16T14:56:48,422   copying build/lib.linux-armv7l-cpython-311/repair_seq/collapse.py -> build/bdist.linux-armv7l/wheel/repair_seq
2023-09-16T14:56:48,424   copying build/lib.linux-armv7l-cpython-311/repair_seq/cluster.py -> build/bdist.linux-armv7l/wheel/repair_seq
2023-09-16T14:56:48,427   copying build/lib.linux-armv7l-cpython-311/repair_seq/twin_prime_layout.py -> build/bdist.linux-armv7l/wheel/repair_seq
2023-09-16T14:56:48,429   copying build/lib.linux-armv7l-cpython-311/repair_seq/build_guide_specific_targets.py -> build/bdist.linux-armv7l/wheel/repair_seq
2023-09-16T14:56:48,431   copying build/lib.linux-armv7l-cpython-311/repair_seq/perturb_seq.py -> build/bdist.linux-armv7l/wheel/repair_seq
2023-09-16T14:56:48,434   copying build/lib.linux-armv7l-cpython-311/repair_seq/quantiles.py -> build/bdist.linux-armv7l/wheel/repair_seq
2023-09-16T14:56:48,436   copying build/lib.linux-armv7l-cpython-311/repair_seq/collapse_cython.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/repair_seq
2023-09-16T14:56:48,452   copying build/lib.linux-armv7l-cpython-311/repair_seq/pooled_layout.py -> build/bdist.linux-armv7l/wheel/repair_seq
2023-09-16T14:56:48,456   copying build/lib.linux-armv7l-cpython-311/repair_seq/statistics.py -> build/bdist.linux-armv7l/wheel/repair_seq
2023-09-16T14:56:48,457   copying build/lib.linux-armv7l-cpython-311/repair_seq/bootstrapper.py -> build/bdist.linux-armv7l/wheel/repair_seq
2023-09-16T14:56:48,459   copying build/lib.linux-armv7l-cpython-311/repair_seq/__init__.py -> build/bdist.linux-armv7l/wheel/repair_seq
2023-09-16T14:56:48,461   copying build/lib.linux-armv7l-cpython-311/repair_seq/demux_for_SRA.py -> build/bdist.linux-armv7l/wheel/repair_seq
2023-09-16T14:56:48,463   copying build/lib.linux-armv7l-cpython-311/repair_seq/base_editor.py -> build/bdist.linux-armv7l/wheel/repair_seq
2023-09-16T14:56:48,464   copying build/lib.linux-armv7l-cpython-311/repair_seq/beta_binomial.py -> build/bdist.linux-armv7l/wheel/repair_seq
2023-09-16T14:56:48,466   running install_egg_info
2023-09-16T14:56:48,514   running egg_info
2023-09-16T14:56:48,537   writing repair_seq.egg-info/PKG-INFO
2023-09-16T14:56:48,540   writing dependency_links to repair_seq.egg-info/dependency_links.txt
2023-09-16T14:56:48,542   writing requirements to repair_seq.egg-info/requires.txt
2023-09-16T14:56:48,543   writing top-level names to repair_seq.egg-info/top_level.txt
2023-09-16T14:56:48,574   reading manifest file 'repair_seq.egg-info/SOURCES.txt'
2023-09-16T14:56:48,597   writing manifest file 'repair_seq.egg-info/SOURCES.txt'
2023-09-16T14:56:48,599   Copying repair_seq.egg-info to build/bdist.linux-armv7l/wheel/repair_seq-1.0.3-py3.11.egg-info
2023-09-16T14:56:48,609   running install_scripts
2023-09-16T14:56:48,610   creating build/bdist.linux-armv7l/wheel/repair_seq-1.0.3.data
2023-09-16T14:56:48,610   creating build/bdist.linux-armv7l/wheel/repair_seq-1.0.3.data/scripts
2023-09-16T14:56:48,612   copying build/scripts-3.11/repair-seq -> build/bdist.linux-armv7l/wheel/repair_seq-1.0.3.data/scripts
2023-09-16T14:56:48,614   changing mode of build/bdist.linux-armv7l/wheel/repair_seq-1.0.3.data/scripts/repair-seq to 755
2023-09-16T14:56:48,665   creating build/bdist.linux-armv7l/wheel/repair_seq-1.0.3.dist-info/WHEEL
2023-09-16T14:56:48,667   creating '/tmp/pip-wheel-55t1h_9c/repair_seq-1.0.3-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-09-16T14:56:48,670   adding 'repair_seq/__init__.py'
2023-09-16T14:56:48,674   adding 'repair_seq/arrayed_experiment_group.py'
2023-09-16T14:56:48,675   adding 'repair_seq/base_editor.py'
2023-09-16T14:56:48,677   adding 'repair_seq/beta_binomial.py'
2023-09-16T14:56:48,678   adding 'repair_seq/bootstrapper.py'
2023-09-16T14:56:48,680   adding 'repair_seq/build_guide_specific_targets.py'
2023-09-16T14:56:48,684   adding 'repair_seq/cluster.py'
2023-09-16T14:56:48,685   adding 'repair_seq/coherence.py'
2023-09-16T14:56:48,687   adding 'repair_seq/collapse.py'
2023-09-16T14:56:48,937   adding 'repair_seq/collapse_cython.cpython-311-arm-linux-gnueabihf.so'
2023-09-16T14:56:48,946   adding 'repair_seq/common_sequences.py'
2023-09-16T14:56:48,947   adding 'repair_seq/convert_outcomes.py'
2023-09-16T14:56:48,949   adding 'repair_seq/demux.py'
2023-09-16T14:56:48,951   adding 'repair_seq/demux_arrayed_experiments.py'
2023-09-16T14:56:48,952   adding 'repair_seq/demux_for_SRA.py'
2023-09-16T14:56:48,955   adding 'repair_seq/demux_gDNA.py'
2023-09-16T14:56:48,957   adding 'repair_seq/experiment_group.py'
2023-09-16T14:56:48,959   adding 'repair_seq/guide_library.py'
2023-09-16T14:56:48,960   adding 'repair_seq/paired_end_experiment.py'
2023-09-16T14:56:48,962   adding 'repair_seq/perturb_seq.py'
2023-09-16T14:56:48,973   adding 'repair_seq/pooled_layout.py'
2023-09-16T14:56:48,987   adding 'repair_seq/pooled_screen.py'
2023-09-16T14:56:48,989   adding 'repair_seq/prime_editing_experiment.py'
2023-09-16T14:56:48,999   adding 'repair_seq/prime_editing_layout.py'
2023-09-16T14:56:49,001   adding 'repair_seq/quantiles.py'
2023-09-16T14:56:49,005   adding 'repair_seq/replicates.py'
2023-09-16T14:56:49,006   adding 'repair_seq/single_end_experiment.py'
2023-09-16T14:56:49,008   adding 'repair_seq/statistics.py'
2023-09-16T14:56:49,010   adding 'repair_seq/twin_prime_layout.py'
2023-09-16T14:56:49,012   adding 'repair_seq/test/build_read_sets.py'
2023-09-16T14:56:49,014   adding 'repair_seq/test/test_pegRNAs.py'
2023-09-16T14:56:49,015   adding 'repair_seq/test/test_read_sets.py'
2023-09-16T14:56:49,017   adding 'repair_seq/visualize/__init__.py'
2023-09-16T14:56:49,020   adding 'repair_seq/visualize/clustermap.py'
2023-09-16T14:56:49,023   adding 'repair_seq/visualize/conversion_tracts.py'
2023-09-16T14:56:49,026   adding 'repair_seq/visualize/gene_significance.py'
2023-09-16T14:56:49,032   adding 'repair_seq/visualize/heatmap.py'
2023-09-16T14:56:49,037   adding 'repair_seq/visualize/outcome_diagrams.py'
2023-09-16T14:56:49,041   adding 'repair_seq/visualize/scatter.py'
2023-09-16T14:56:49,046   adding 'repair_seq/visualize/scratch.py'
2023-09-16T14:56:49,048   adding 'repair_seq/visualize/templated_insertions.py'
2023-09-16T14:56:49,049   adding 'repair_seq/visualize/volcano.py'
2023-09-16T14:56:49,051   adding 'repair_seq-1.0.3.data/scripts/repair-seq'
2023-09-16T14:56:49,053   adding 'repair_seq-1.0.3.dist-info/METADATA'
2023-09-16T14:56:49,054   adding 'repair_seq-1.0.3.dist-info/WHEEL'
2023-09-16T14:56:49,055   adding 'repair_seq-1.0.3.dist-info/top_level.txt'
2023-09-16T14:56:49,056   adding 'repair_seq-1.0.3.dist-info/RECORD'
2023-09-16T14:56:49,064   removing build/bdist.linux-armv7l/wheel
2023-09-16T14:56:49,417   Building wheel for repair-seq (setup.py): finished with status 'done'
2023-09-16T14:56:49,427   Created wheel for repair-seq: filename=repair_seq-1.0.3-cp311-cp311-linux_armv7l.whl size=596175 sha256=2ddc1b3b90d10422dd6d63b7ae21a386b66ef4f1829bc6fa2aa2e7c609e4197b
2023-09-16T14:56:49,428   Stored in directory: /tmp/pip-ephem-wheel-cache-545j6a6q/wheels/0b/5e/31/d52522e8dd0f325102ba468bb77327d6784cb3b3332ffb21c0
2023-09-16T14:56:49,438 Successfully built repair-seq
2023-09-16T14:56:49,455 Removed build tracker: '/tmp/pip-build-tracker-9onb8i96'