2023-09-16T17:43:09,922 Created temporary directory: /tmp/pip-build-tracker-4ext5uxt 2023-09-16T17:43:09,923 Initialized build tracking at /tmp/pip-build-tracker-4ext5uxt 2023-09-16T17:43:09,924 Created build tracker: /tmp/pip-build-tracker-4ext5uxt 2023-09-16T17:43:09,924 Entered build tracker: /tmp/pip-build-tracker-4ext5uxt 2023-09-16T17:43:09,925 Created temporary directory: /tmp/pip-wheel-yilicru7 2023-09-16T17:43:09,928 Created temporary directory: /tmp/pip-ephem-wheel-cache-tfj36vel 2023-09-16T17:43:09,949 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-16T17:43:09,953 2 location(s) to search for versions of gemmi: 2023-09-16T17:43:09,953 * https://pypi.org/simple/gemmi/ 2023-09-16T17:43:09,953 * https://www.piwheels.org/simple/gemmi/ 2023-09-16T17:43:09,954 Fetching project page and analyzing links: https://pypi.org/simple/gemmi/ 2023-09-16T17:43:09,955 Getting page https://pypi.org/simple/gemmi/ 2023-09-16T17:43:09,956 Found index url https://pypi.org/simple/ 2023-09-16T17:43:10,215 Fetched page https://pypi.org/simple/gemmi/ as application/vnd.pypi.simple.v1+json 2023-09-16T17:43:10,315 Found link https://files.pythonhosted.org/packages/3d/74/21e7705118e1f4ac86f03f99a71dc2ba33b8a73fef727be638ee054886e6/gemmi-0.1.2.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.1.2 2023-09-16T17:43:10,316 Found link https://files.pythonhosted.org/packages/13/89/4369460dd34f3e7f46c4ec44765cf9f79e392cf3faa8b3792285db77c61f/gemmi-0.1.3.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.1.3 2023-09-16T17:43:10,317 Found link https://files.pythonhosted.org/packages/fb/18/819ab7731075516bb422586a97a4e59313259fa60e49642e26859fe0ef76/gemmi-0.1.4.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.1.4 2023-09-16T17:43:10,317 Found link https://files.pythonhosted.org/packages/d4/d5/85a0fecb747b415fcc6e3fee9f48edab936e6339ec50736abe1dcfc0d460/gemmi-0.1.5.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.1.5 2023-09-16T17:43:10,318 Found link https://files.pythonhosted.org/packages/e5/96/664c971ddae50eb00ff9ee39ce8db4e3f481a1ca740583081a1a84146d39/gemmi-0.1.6.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.1.6 2023-09-16T17:43:10,319 Found link https://files.pythonhosted.org/packages/e5/41/e51478a35846a23ef2764d9a36ced90e63eafd49c7a4c85559b0566c3884/gemmi-0.1.7.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.1.7 2023-09-16T17:43:10,320 Found link https://files.pythonhosted.org/packages/20/bd/36cb4b950bbe78d5a4e3fd1c127100894fc97d059db57771fa1fd1ce9f2b/gemmi-0.2.0.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.2.0 2023-09-16T17:43:10,321 Found link https://files.pythonhosted.org/packages/d1/2a/7cb4d0fbc88af06fe42971bfebbbefa670a156b396a9d59fb428809977c4/gemmi-0.2.1.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.2.1 2023-09-16T17:43:10,321 Found link https://files.pythonhosted.org/packages/09/bd/2d15c8e32c28b11d3f781293a3c828834874bf0c17d193a65a0ab4e781df/gemmi-0.2.2.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.2.2 2023-09-16T17:43:10,322 Found link https://files.pythonhosted.org/packages/2b/d5/15ac654339e17b64f6c4c3d07cea51f6f329eeee1ba01ad58536279fd400/gemmi-0.2.3.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.2.3 2023-09-16T17:43:10,323 Found link https://files.pythonhosted.org/packages/32/fa/781063687c6e47133a8c39b142a10573546153dde6f5558e9802690bb184/gemmi-0.2.4.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.2.4 2023-09-16T17:43:10,323 Found link https://files.pythonhosted.org/packages/8b/d5/92f78ebb4734212283301730b193bd44f3ea74161bfd413939a88e976f67/gemmi-0.2.7.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.2.7 2023-09-16T17:43:10,324 Found link https://files.pythonhosted.org/packages/4b/4b/51d357ef35fcf27a5325426b9326498ab1482be37efbc06a92202f921407/gemmi-0.2.8.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.2.8 2023-09-16T17:43:10,325 Found link https://files.pythonhosted.org/packages/e0/9c/6ea8ea2bbda7ab9eb8b548d899cc328aabd9cf04c720e1cd3287fcd00544/gemmi-0.3.0.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.0 2023-09-16T17:43:10,325 Found link https://files.pythonhosted.org/packages/e5/ed/6a91e0fe126a30842c93bfa3865dab81d8383a12026c034edfdf5bf60f85/gemmi-0.3.1.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.1 2023-09-16T17:43:10,326 Found link https://files.pythonhosted.org/packages/5d/86/6cef13dcfd9b5f3101e826f35fd54088942496489b9307480185fe63d2ed/gemmi-0.3.2.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.2 2023-09-16T17:43:10,327 Found link https://files.pythonhosted.org/packages/af/9d/ce0bdf384249da75e4584b624f5a144366a3c8eceff2dff19236aff08dd1/gemmi-0.3.3.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.3 2023-09-16T17:43:10,328 Found link https://files.pythonhosted.org/packages/b3/b8/1f41f9a0849c5011cb890f89b6548c8dec1b52ee4bf28cb0ebe3728016e9/gemmi-0.3.4.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.4 2023-09-16T17:43:10,328 Found link https://files.pythonhosted.org/packages/f4/f0/f4cd4d29e53707efccb2e6d4b2c185851dc1ef02f7aa041b9803fb1a8590/gemmi-0.3.5.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.5 2023-09-16T17:43:10,329 Found link https://files.pythonhosted.org/packages/39/b1/9ca0ad395150af606cf85a2e45c2dfaab02492d36ff264efdcf25f7479c1/gemmi-0.3.6.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.6 2023-09-16T17:43:10,329 Found link https://files.pythonhosted.org/packages/99/ff/0da30f43421b952256ba77edf0eee9bc0711715a4687489ee33037a1f132/gemmi-0.3.7.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.7 2023-09-16T17:43:10,330 Found link https://files.pythonhosted.org/packages/06/4f/5e2e02aa93bcdf27b54f810ecda6e3d08b962d8ef27c9fa731f04523dc80/gemmi-0.3.8.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.8 2023-09-16T17:43:10,330 Found link https://files.pythonhosted.org/packages/c0/4d/7567aed9911e6f62021508d72deae27d7f1e5dcb41032c4d642c01158408/gemmi-0.4.0.post1.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.0.post1 2023-09-16T17:43:10,331 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f5/da/3fb440c7b946febcc4fdb3f4928b1e93b2627ccdf26d69962f3c05b8f077/gemmi-0.4.1-cp36-cp36m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,332 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/88/8c/72cd48a1e89ad92f24e67d15545b9e3f478f256fb4729dbbb4985a0efe2f/gemmi-0.4.1-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,332 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/cb/84/0162cc2197241200740655ebe6cfd33342ddb152feca089f98aab91f56b0/gemmi-0.4.1-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,333 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0f/3a/c69ec458774b60d61a929ac2357d0b9c0a0b5187e55cdb75e138cefee2d3/gemmi-0.4.1-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,333 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c2/a2/55410bfd6be3391475c2a005fcde251f843e0d117707dacb07bb880d2b21/gemmi-0.4.1-cp38-cp38-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,334 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/93/a4/361f66459b444340a29c1dbeb81918dccfab580f92752571a361b53c80fe/gemmi-0.4.1-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,335 Found link https://files.pythonhosted.org/packages/2f/d5/4ca93e1691bd8cb2d1e06ce4ff816eca300aa4e09416caf45bbb6451f013/gemmi-0.4.1.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.1 2023-09-16T17:43:10,335 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/22/03/599bf3752327fdbc408133daf5d6a7b950d72c4d81f20d8d3b2d8e95be85/gemmi-0.4.2-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,336 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c4/aa/f03b573d7333211fda34ad2c7dddbb4b7310fcf9caf7e938318208819049/gemmi-0.4.2-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,336 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/34/eb/d55b627cd8cb0f9bd3fc076afdd8b3b999316d6c4c24b6b703b97730ffab/gemmi-0.4.2-cp35-cp35m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,337 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/da/6a/fe1a65806633ea2129507b0f8b4034afdbf383e474a12152839ee50a52eb/gemmi-0.4.2-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,338 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/10/59/a4976acb0891bc600c161f08c341666daf419885f07a105e335e1aeeecb7/gemmi-0.4.2-cp36-cp36m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,338 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/bd/f9/0e3c3e3cbb2116fa23a1fe815542a971a5775cd7ada9d02ffd5d58fcde85/gemmi-0.4.2-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,339 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f3/95/85635908935957b4ccc1700dafdcd0c309e00a4a3291aa7a8d6c65a5f089/gemmi-0.4.2-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,339 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/bf/5e/2dcb2454003be5505eb7a75b5eecde74486d2a1bea2f189fc30c749076e6/gemmi-0.4.2-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,340 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3c/8d/055161b661f3dcebbd1cfa3c55ba02ab7f434d87147481b3566080a4ccac/gemmi-0.4.2-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,340 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ce/82/a45cb30c350b56f4dc628986b84b91310b88e1b2ac73ae3b37c3a1ac8585/gemmi-0.4.2-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,341 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9a/39/784a739b8d83175667ef1cc85a53acbe79b9437292031225b3ed552bc035/gemmi-0.4.2-cp38-cp38-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,341 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5b/62/8911a99982bc95e629f41a7096f0f907cf4b001ed6c0087e0a2763c943e1/gemmi-0.4.2-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,342 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/95/9b/d75a5882a9bb13d47e99e0552b516e330004b411e4547b37a3743c74976b/gemmi-0.4.2-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,342 Found link https://files.pythonhosted.org/packages/a4/ac/b850ac03ad0f899c0c8f699af60b5c515291c74470601e3b12803d6fca2e/gemmi-0.4.2.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.2 2023-09-16T17:43:10,343 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/23/72/c5e726b2722bdfbbb82847582ff64caaf60f70ca38adf11946561fbc75ce/gemmi-0.4.3-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,344 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b7/cf/5a9f3534db7e32658104b69e8a631c4fcf9a4bff7b8d38dca572bb6ed5d7/gemmi-0.4.3-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,344 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d4/8b/c55499a4d0d2a155c4c4ce220a2a942f0026909f4ec849609fc6688eb5a4/gemmi-0.4.3-cp35-cp35m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,345 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c3/c4/d3239cd44ce93e14454e2f6596a723f5245776fe822238ac0473ef6d81d4/gemmi-0.4.3-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,345 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7c/b9/4821a0951160692524e8394629b952337ad0fbe111b5cf26dc56a9c8e59e/gemmi-0.4.3-cp36-cp36m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,346 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/6a/52/e2813c31a8d080649737308823e85d17324defb683a61e853beea00ed63e/gemmi-0.4.3-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,346 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b1/91/659f69913777cc1fa590f25f5831d9803c9681923690e426af680d9380cd/gemmi-0.4.3-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,347 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5a/c9/e78fbd8a8d48f13c9da4e6afc4941bbf40142e6423d487335f8fcf46e2db/gemmi-0.4.3-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,347 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9e/6e/0ab2f8a07c42a54d6e6fda65549ff13a081c94601f084f795a380a8f14d2/gemmi-0.4.3-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,348 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/dd/43/aa263331953f26ee8cf573129576a87252c4667686b04280e2e2d46a1ef7/gemmi-0.4.3-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,348 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ad/37/dd827724ae053469469c4dc3f050b5b16093195fa50030a202a593fb380a/gemmi-0.4.3-cp38-cp38-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,349 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/cd/15/4460162edf9aea5c568b6fbdf2b55536800b32e639064db8fb112c779edf/gemmi-0.4.3-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,349 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4d/35/e8b97d567e27090876330931af7a5f097aed5387067718a25a9d4225ff82/gemmi-0.4.3-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,350 Found link https://files.pythonhosted.org/packages/b7/6b/b4c5c2c12da58813f2478fdffac17d86aaf46c570b6f8b42eef9778d8180/gemmi-0.4.3.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.3 2023-09-16T17:43:10,350 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7a/88/e074befd61f9abbc617edd24283bf642869882c023b2da5cf78bbbe8b967/gemmi-0.4.4-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,351 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/74/f0/47da82d4ba10f1d15a212d74c9d712158b994bde8115f9d6d01f5c4ebe6f/gemmi-0.4.4-cp27-cp27m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,351 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/1f/b6/28f2a87d7e189fe9604897e13fd05a881a7933d7d293fc04efdbc6ad436b/gemmi-0.4.4-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,352 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/89/06/0c6eda981f85fb5f1633d19c8ce0cbd2d8fcf5677b5d563740241737ac90/gemmi-0.4.4-cp27-cp27mu-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,352 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/bd/66/c696b84cab12dcc9c41f4d59eb767ed681359a0eafd331d9dfe5bab42b8c/gemmi-0.4.4-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,353 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/1b/ed/d6745f20401fa9383ec0f166120c8f1d569795d5dc75601386e9811e587e/gemmi-0.4.4-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,354 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/dc/18/0b5127d8f84979f371d588a323047483a22604eadb457ce9cee709895f29/gemmi-0.4.4-cp36-cp36m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,354 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/6b/62/eea9c84d0e37df89b34c03b562522556419c080462c92eede3ccb9697625/gemmi-0.4.4-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,355 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4c/62/78cbc5c9e8f68a84547621a5d42ae22560c0215f918a6c8e007835a59e8a/gemmi-0.4.4-cp36-cp36m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,355 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a8/86/7258f7f4797308e3750c30ec16d9850dac8d0e865fc1d2fcd18e345ff82d/gemmi-0.4.4-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,356 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a9/44/c8cd594bc8075226ec1d38c330eb412650e75d9899db7c160b96b788fe5f/gemmi-0.4.4-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,356 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4c/68/832c4428629c200710b73ab360bbf3cbbe7bdff439618e06c136efb083a4/gemmi-0.4.4-cp37-cp37m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,356 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c5/02/b1edf3ca6e2bbc04d5bf9223ca53571a6dec25156b708bc4303352f4f8b1/gemmi-0.4.4-cp37-cp37m-manylinux2010_x86_64.whl (from 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https://files.pythonhosted.org/packages/61/12/f0e468abe27ca297d48739409f91ae7c8316179eb46e7d6566ef6f8531f0/gemmi-0.4.4-cp38-cp38-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,359 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e3/25/f86bf28f87680c7acfc0366eaeef544af75c17480777e9572f845b73a9ae/gemmi-0.4.4-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,359 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0f/0b/5ed3cfbd0bc92abf4bed4dd765ed5c3aa639ff2500abe9855c6178f4a8f5/gemmi-0.4.4-cp38-cp38-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,360 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/84/54/78bf9f5257e928db4a5c3464ac0258b2e7c8ddfb01103dd2278bfc996a1c/gemmi-0.4.4-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,360 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fe/73/b1274d1b4e946992e17c6260498e2538744eb33003b17d9d9a8ee0560b32/gemmi-0.4.4-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,361 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/39/44/e9f31da6e5d63564620ccdfa8fbd811a7056d0ea114874273a8357b14284/gemmi-0.4.4-cp39-cp39-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,362 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f3/3e/d823ff5a6fa3dcf98a6460ee281c82f73c384f27467d869018b674aa7636/gemmi-0.4.4-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,362 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c4/14/73eda6090c1a6062c6428762e3b722856dada25bfff509532ccd1b039c87/gemmi-0.4.4-cp39-cp39-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,363 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/84/f7/2b4825646ab5c6afaa50858c97267cbc2b234b6e99a43d956924c6518f0e/gemmi-0.4.4-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,363 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b5/34/8bdb8d15ead8117585bec881c80a62983fbd74ebc1b08bf164f15d5f97c7/gemmi-0.4.4-pp36-pypy36_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,364 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ca/14/dd376612fc3899f68d83d60d1988f89402dd0c8f4a7010006b2f567f0d71/gemmi-0.4.4-pp36-pypy36_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,364 Skipping link: No binaries permitted for gemmi: 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2023-09-16T17:43:10,366 Found link https://files.pythonhosted.org/packages/50/93/11e3197ee0d201256c63faca3023f68eb50823f4f0d3dd15c537fce89cc9/gemmi-0.4.4.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.4 2023-09-16T17:43:10,366 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a3/89/62715a67fdbec732441eefb9ab39bd62f7f43334ac4015b791b977be68c5/gemmi-0.4.5-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,367 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b5/39/c38fa021a44e9343cc886722365d453cf364e2a5a67c285bb328b20ff540/gemmi-0.4.5-cp27-cp27m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,368 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f7/18/b755993b408896b60e4852f9107331006a1b99c83926a948c9b4b27aab32/gemmi-0.4.5-cp27-cp27m-manylinux2010_x86_64.whl (from 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No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c0/72/77ea0f799d73d54999181ddd615206492343ada2617996f7169acab168ec/gemmi-0.4.5-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,393 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c0/0b/52ea2dd8bb3d311e441674a79cee4dd490140865595473cb222096c8cdc4/gemmi-0.4.5-cp37-cp37m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,394 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/04/0d/a91f70f43b8a0732f82739b3abac31fc6d363c229395308205b87d383045/gemmi-0.4.5-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,394 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/72/1e/57b1c8dd3d6b918198328579e69ce68f7b0df2d7021fe9b7dac55d7e9cb6/gemmi-0.4.5-cp37-cp37m-win32.whl (from 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binaries permitted for gemmi: https://files.pythonhosted.org/packages/af/ce/ab46b8088defeb988d95646598ba860a8a627231198d45ce61a3605ba00b/gemmi-0.4.5-cp39-cp39-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,400 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/43/2c/663a099339e2bc8294891757038496434774ac16c65a2798cc431e206a55/gemmi-0.4.5-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,400 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/78/f1/13a68d2f9a11b3664e0e1de4d79326cd67862bca4f5c49ee4bef2514b9db/gemmi-0.4.5-cp39-cp39-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,401 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e5/82/f72b3028dd1a01369dab40d8943011dd96bd56d7d019b848b9545345a50b/gemmi-0.4.5-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,401 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ee/6c/c0b2f77136489e9aada94adf29c586fa51e982d63cb162b71f598aa52e4a/gemmi-0.4.5-pp36-pypy36_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,402 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/2b/62/0b7d622c7961f0df3818fd1e56d398c7c723ddacb9eaf864d1c729fc8e22/gemmi-0.4.5-pp36-pypy36_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,403 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5c/b1/c48b5b6c866bc104ad5ad0667d4133d9185a982928235270332fb8a21436/gemmi-0.4.5-pp36-pypy36_pp73-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,403 Skipping link: No binaries permitted for gemmi: 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2023-09-16T17:43:10,408 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3d/74/b4ea05a4bf76367e0ad27b4c5bc02c2ed31c32bdd2386378d72c90175c59/gemmi-0.4.6-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,409 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ac/10/23fa05a07b6df83608aa59cc238f74e84d8058ad2ae310bdbb47d1c81f85/gemmi-0.4.6-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,410 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9c/55/e8ba86967640ea9c436a8dda39164837d45e7ee5f7fe6688ec9e52ceec81/gemmi-0.4.6-cp36-cp36m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,410 Skipping link: No binaries permitted for gemmi: 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No binaries permitted for gemmi: https://files.pythonhosted.org/packages/51/51/71162451f2e331bd46c154b2673f38823559e90989d5e5c1196f8fd9565b/gemmi-0.4.6-cp37-cp37m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,413 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4b/29/d5b7a27bad71957f41c644c3c19637f0d9fefabbbc4c501cf6be1eb0537c/gemmi-0.4.6-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,414 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ca/e8/506e69e5caaf93daf0e9429f2379a16ff07d39b76916944f492d7fe369a0/gemmi-0.4.6-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,414 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a9/21/cd910ccb94c96cc6608e109eead1645be18715b4699382aae51604464b71/gemmi-0.4.6-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,415 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/78/df/e72a1f1be72b6a3ff8f4def21ec8b31ac56c77bad1b871386fc8028115dd/gemmi-0.4.6-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,416 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/56/cd/c2fe5e0c0673c734db137d12d45ade2a16de88a68772926ddff4ce230ac6/gemmi-0.4.6-cp38-cp38-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,416 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ca/08/607d0949bb3e508feb63d71dcb16c8cc54b146d5d020e228b90db69f44c0/gemmi-0.4.6-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,417 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0e/cd/df5f9d994a9b20ea68cc6efb0892011d870db72ec985c77df6298f3ca836/gemmi-0.4.6-cp38-cp38-win32.whl 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https://files.pythonhosted.org/packages/ec/94/8d880d7694f846d9a480b504e4cc4f121055b001e6d2d9070102782bde74/gemmi-0.4.6-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,420 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/07/ef/2b5075478d09a0c9a688507124642f7e8a99d51d46c6a8dfffc9a9d9ff8a/gemmi-0.4.6-cp39-cp39-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,421 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d1/92/fcae326c99c89b286efcba8cd0c95e125f6ba909c2550ab23ad1e8377cc0/gemmi-0.4.6-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,421 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/24/8b/e39db36831a95644e89dea92bdd451ec6568b4e506ff9c2194cafd38d56f/gemmi-0.4.6-pp36-pypy36_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,422 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7c/0a/d8cb7a05a6e3f199e0363e61e8cfc369820ea6adc84affc94a9363dec59f/gemmi-0.4.6-pp36-pypy36_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,422 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/53/fa/89eabf0dbbaf91fbfc99bffcb3d603474bc6cd1ef9615e3f3213cd0cfe9d/gemmi-0.4.6-pp36-pypy36_pp73-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,423 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/85/de/a01cc76fdb904af071b74b404daedeedb9fd215609f18e2104e9ec42cabb/gemmi-0.4.6-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,423 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f3/c0/22d5631bb9cf8af0c9a613987e4adaf670730c2af9878dcd49a8503aece8/gemmi-0.4.6-pp37-pypy37_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,424 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/79/86/a7bd5d5c766a719319244373bf8e455bf85993e67230341de9be0b3631d8/gemmi-0.4.6-pp37-pypy37_pp73-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,425 Found link https://files.pythonhosted.org/packages/ce/18/3fd50934956b378006bbd12cde768c35dd55c7f5359e82c8680100da07a4/gemmi-0.4.6.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.6 2023-09-16T17:43:10,425 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9b/86/cdff573b699036edc8ca9f7d83f3f40736ef17ea79726e1b2de7debcd72e/gemmi-0.4.7-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,426 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/1c/6b/786e51debc4e0e199c67fb5a00972f02c6b0e01fdbf6ad19b726fba6a669/gemmi-0.4.7-cp27-cp27m-manylinux2010_i686.whl 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Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c4/b9/f336e9522b8375f5e3ca8f02da39a1b3e5a62aa062ca63136c267a69f2ba/gemmi-0.4.7-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,431 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b3/54/4c0dd5642138b078b208fcd9600fc32e2d412b8945bc5b82fc74cbef20fe/gemmi-0.4.7-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,431 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/25/91/ba6367b2cdd3e7ae0400acecb3a8b9ec714a03850eec8023aa41f6124ff7/gemmi-0.4.7-cp37-cp37m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,432 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d1/62/5e843d8e0706d9a1afadad6d8154e837f885aeea77ce72b55a7d88fe5cb3/gemmi-0.4.7-cp37-cp37m-manylinux2010_x86_64.whl (from 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2023-09-16T17:43:10,439 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/32/48/f29a0b98b00d7f3a3cf6b7b194f77eab3cbb83a630be8cbc4fdb2d23ff04/gemmi-0.4.7-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,440 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9b/9c/f6426743545f32e53190ca22d524819dff6b24ca98fc5c164da1db23f6db/gemmi-0.4.7-pp36-pypy36_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,440 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ab/07/ea64580e7ed5ce8f2d1db56bf901e9d169d58d4dc52061d5453f6947b8ef/gemmi-0.4.7-pp36-pypy36_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,441 Skipping link: No binaries permitted for gemmi: 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2023-09-16T17:43:10,443 Found link https://files.pythonhosted.org/packages/1a/6a/57ab433972758026e23b70317c45e6dd3d8d5e3b613395222cfc1c66f8e0/gemmi-0.4.7.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.7 2023-09-16T17:43:10,444 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e3/09/d16e2f83de54713c5be0b634de276a7c7f6e2edc4b68acdd8f55973d1fbc/gemmi-0.4.8-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,445 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/bc/7b/a0f6d52641d618fca00d462d3ea38164a3d2abe6ced000f01b804975b31d/gemmi-0.4.8-cp27-cp27m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,445 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/09/bf/081a34019f66d66d4821f790ed3ce0f13f19ab1a1bad9c9867011848465f/gemmi-0.4.8-cp27-cp27m-manylinux2010_x86_64.whl (from 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No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c6/66/c5d99fd508028ac16185206845a30e077d6a50e696d70f4907763bf8604a/gemmi-0.4.8-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,451 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/15/9d/2625a39a3b865592dd6625e6ffb15a8f8db73b4b6e6fb4579a01180ac7a6/gemmi-0.4.8-cp37-cp37m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,451 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/38/67/04678d6d5c1e221db2d2c454ebd191f1e64426925ac78c74b776923cb17b/gemmi-0.4.8-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,452 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/85/2d/550fc0225d8ee08fd7bdfb0c9afb2d813aed43f7c425bba49f74a91f1432/gemmi-0.4.8-cp37-cp37m-win32.whl (from 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binaries permitted for gemmi: https://files.pythonhosted.org/packages/e1/c5/eccf26a655b44740191e448ab62723e73d9d8101fb7cb61e9ae612f50772/gemmi-0.4.8-cp39-cp39-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,457 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/91/fb/02cddcbd54aaf2bf654984d03228e3ee2fbe3aedd632bc9d8627ef27cbcd/gemmi-0.4.8-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,458 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7d/68/d6aea40eabf9be195acb7d626ba502c74ee2dee946630e72239a9cad1a81/gemmi-0.4.8-cp39-cp39-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,458 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ff/15/2b20579d523b79117297458866daa67deed9bb3ad93ef94dce78d57c83ad/gemmi-0.4.8-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,459 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/97/34/5c0e1a3c55b929a6f001cc57407cefa673bda7202b449aab8b0d94de96a8/gemmi-0.4.8-pp36-pypy36_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,459 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d6/34/367588c79586d6d659f1783bb7db682f15bfe2c4dfe14a418a763f972719/gemmi-0.4.8-pp36-pypy36_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,460 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f4/3a/d3278fc9583de3e8cfb6db2692ee91fe9551046274e4c561ae9ee82af8ca/gemmi-0.4.8-pp36-pypy36_pp73-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,461 Skipping link: No binaries permitted for gemmi: 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2023-09-16T17:43:10,466 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/91/c1/e3a3dda52195d2256e18deaeba42d1ff8870cc2c856f912e3d92d5286419/gemmi-0.4.9-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,467 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/91/86/7497f5f70a47af921e946978c282d41f6d6e48aa7cba7d9e48a91665674f/gemmi-0.4.9-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,467 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d8/4b/12cda0c8a94cf6f5424ecb640e97e53bf3c9ed9bc714ecf6f5da73acf356/gemmi-0.4.9-cp36-cp36m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,468 Skipping link: No binaries permitted for gemmi: 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No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f4/70/52c43c2a25e9394b8e21681b1914e2d31c2f5cb5b8c072dff1aaa9448b28/gemmi-0.4.9-cp37-cp37m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,471 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a9/dc/59a7a0c5c4f854f6e1adfce5699f1ebcfe6393632c218238a5a31fa0599f/gemmi-0.4.9-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,471 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a2/cf/b3ac2fe6712a13eb3faa131256a79ac2d58a46add4912f09a029102fda67/gemmi-0.4.9-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,472 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0b/79/a9f847512b292ba6a2718a87ac54090d9af14b7bf54ac874ff100122dd8f/gemmi-0.4.9-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,473 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3a/23/46a9343185dd2760a81553627971daea3d2af7e5762585b2234f111cefd6/gemmi-0.4.9-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,473 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e1/e1/d92de9990dd38683f20dba5974b7abff16748fe7dafe93693c9579ab64a3/gemmi-0.4.9-cp38-cp38-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,474 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4b/e7/f29a3313d0f0ebb7cb7f30157f5e72360811dfe3967e54d908156155086a/gemmi-0.4.9-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,474 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/50/c8/52ad765f76e715a19ecd1b05d6b2f61e3022037343fdd21ac596f8b61ef0/gemmi-0.4.9-cp38-cp38-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,475 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4d/2e/8a73d84362328ea3326470970f038a015a4dfd239c7416f66bcd09e945b6/gemmi-0.4.9-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,476 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fd/40/38935fe474a830829060f76364b181cb3530cc4e55f70eb5e703c2f35792/gemmi-0.4.9-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,476 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c1/60/bf7c8d55f0e01150736289648b9317afc8aaaaa341d2df736b88250aac1f/gemmi-0.4.9-cp39-cp39-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,477 Skipping link: No binaries permitted for gemmi: 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link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/72/78/3d88e30416ea7e5281a388c548786e42cc34d0a3dbc5b6c3ae99c4e9584c/gemmi-0.4.9-pp36-pypy36_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,479 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/54/70/24d2179a9a315ee7697b89434fe4704fa976bc5f8f35bd36ada7d3146554/gemmi-0.4.9-pp36-pypy36_pp73-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,480 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/6c/57/ae1e113330952b2dd3e16054607347065c39635d5b0eef42f82706c4573e/gemmi-0.4.9-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,481 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c5/e8/5f9736f5c9eb35d4e7e46863ae1178edc03ff57969c4ec2b410442bf588d/gemmi-0.4.9-pp37-pypy37_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,481 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/2d/a2/8fa1006b4b71ffb6127c284aa6a3ab434aeee124724333f338d6b8b63019/gemmi-0.4.9-pp37-pypy37_pp73-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,482 Found link https://files.pythonhosted.org/packages/a3/07/40e5d0b8eeed379c2f0494b24d5777df3ad1df473e49f694688fe55d606c/gemmi-0.4.9.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.9 2023-09-16T17:43:10,483 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5d/7e/b1b2e2352137c9efb05b74829494b236cba98819d7b1eebecea2712cfa0b/gemmi-0.5.0-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,483 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d7/e9/ec01690a20730dcd1a058fcceede913ceaa418cf54ab33ac6ae581afccb0/gemmi-0.5.0-cp27-cp27m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,484 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/96/4b/e158002bc02949b84a5db4d34ee590e483ecbdf0933c91d44623fdf2d0bc/gemmi-0.5.0-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,485 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ba/2e/35ee66fe2b29f24d4ade466c65bcc05a329831cf2b2b0835c8e5f605c288/gemmi-0.5.0-cp27-cp27mu-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,486 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b5/b7/df0e4c0f360194eecc6497ccc9efbb77e16e86e30a80f05fb8c826961084/gemmi-0.5.0-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,486 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d3/5f/2a90f7feffa450e0c01107b789df325ad04d6d03e38c0170e4947247eac8/gemmi-0.5.0-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,486 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4b/cb/3095d21f6581cce5238ef7d22a952dd686b5cde4e5f0353b42f7d5722d6b/gemmi-0.5.0-cp310-cp310-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,487 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/62/9a/df01727dabeeec4325edd3c6e300394c351ef632dd924a1e57b95397ac5a/gemmi-0.5.0-cp310-cp310-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,488 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/17/ad/7711a08353106486f32bae4f04cdd61e9d074cd6f4041529d32ca8733947/gemmi-0.5.0-cp310-cp310-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,488 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7b/90/839af23d8b9ad3fc3c8082013d31940de27508350b274e405a716cbd6c36/gemmi-0.5.0-cp310-cp310-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,489 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/80/0f/6f8136965ed4b67f0b63ae86263f5012e4e5fb98c9d45ae6664c38e5934f/gemmi-0.5.0-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,489 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/89/3c/ff58df8fff8168a9a06e5f6ecd3f85e4047b8b4b1d53ae7f9b1f71d35b85/gemmi-0.5.0-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,490 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b6/1e/f77d398d0badef12f6717696b4781114fc8840413d03f5cd9ee6f867e212/gemmi-0.5.0-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,491 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/2a/1e/5519dac06aa9d7c30e6402b54a11621abe66b796f2050c5f26be003cf3a2/gemmi-0.5.0-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,491 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4e/08/902a8302cd99b58450b9e7ab3f72c0f579bb6f142a491d2bb36792868e51/gemmi-0.5.0-cp36-cp36m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,492 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b8/2d/f75ed6b935336247702844ce20b8c542d5d1f11938f04675c822d536ca54/gemmi-0.5.0-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,492 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/17/a7/92cc0e9a3c0ca7cb74cf4a9842a6ee8e73f889474f759316d15468ad756b/gemmi-0.5.0-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,493 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/be/77/d6b339d7fb4d03b99cb7348548308df8aa2083c036892cf1cd0348adc008/gemmi-0.5.0-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,494 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/8e/de/de64b9614bc093414e201e41af48e62491033d02d54ca10518789f01bad9/gemmi-0.5.0-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,494 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a9/ef/a8a518a29b43c417dfe8599b97ff8810a10f2ebb932cbc599d221ea05f34/gemmi-0.5.0-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,495 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/77/47/2c77c4f20424b8033cb19f9149b10f37248f6362bf6b8645470cd912ff9a/gemmi-0.5.0-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,495 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/2b/6c/92cdf7e4a6e25d3e38fd9240de050dd0cd824732ae7b110286881767c7a2/gemmi-0.5.0-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,496 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ea/0d/d2fdbd7c6b9b84769358c7e88fe97f3cbde12b3b6f5c177fd36a5cefcea4/gemmi-0.5.0-cp38-cp38-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,496 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/2b/40/ba626feff2b321db0b80b31312142f8dc0da8706ea65eba09eb92c69fb52/gemmi-0.5.0-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,497 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/8e/58/2e3530707625e09caf89244deb9759afc44a775a2fff6ba3a7bef82ea476/gemmi-0.5.0-cp38-cp38-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,498 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/8f/3d/2245c341a333ef8fa247e44237665150e6167f8ac2c63dd01f789bd72959/gemmi-0.5.0-cp38-cp38-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,498 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3a/89/33e00d7d352fad174b8767c4b9e8538fb6f33021689a36ee3928ee9924bd/gemmi-0.5.0-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,499 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/87/d7/7dc338573b4b8181c10df98be95cdbeb0b4e6a93079096623222dd6aa3a8/gemmi-0.5.0-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,499 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b9/1c/37636503b6acc4df72f7f2b8bb15941a44f129b0190a1f0abcdb561dda1a/gemmi-0.5.0-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,500 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d5/95/61916884f56af3cc500a8029a478e45eb05a716574c71656304bfd3455ee/gemmi-0.5.0-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,500 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a0/64/03d57b7c76535f4d2e79bf36c405ae25619264e9b1d7f673b0d204f13bd3/gemmi-0.5.0-cp39-cp39-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,501 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/95/04/4e7b48d479213ee6907e50c42b568c789ff991e11a69c628595f24908d91/gemmi-0.5.0-cp39-cp39-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,502 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d1/45/60bc4f0e73c1ed8c1071ccc74c3ae860b47d457ccdc9f930e0277482e3a6/gemmi-0.5.0-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,502 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/96/3c/66946187b011efb26cf735df9fcd1e6ae5a91cd4ddbe216beefc6be26172/gemmi-0.5.0-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,503 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c5/a4/44932652e4acd0c04debcdd7115d1c5a087fc8e7477cdbbbf4f1ee771e74/gemmi-0.5.0-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,503 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c0/50/d2bd30b284932128864c0ba34e3a8cf0dc6d1c9b6dd44e081807a30927f3/gemmi-0.5.0-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,504 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a5/be/8da12fbe007e468ef7125affeb15375ea602ab22eed9d5197278356ae884/gemmi-0.5.0-pp37-pypy37_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,504 Found link https://files.pythonhosted.org/packages/76/6f/0f81a068de2ac6f7153b9590888c29247a3ca23d1b3e5f54e9aab3f90eda/gemmi-0.5.0.tar.gz (from 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https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,510 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/93/c9/6f2873961d70968de2c7454667356545b49729458986e2445babca52b666/gemmi-0.5.1-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,510 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/2b/8a/5bee8dd8d5fa98a08788e90bc85f178697095ee874fd519f851371638ee3/gemmi-0.5.1-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,511 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fa/70/de03b41043537110b431c090827318d40e987d2d76d45cc2b26568069a17/gemmi-0.5.1-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,512 Skipping link: No binaries permitted for gemmi: 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2023-09-16T17:43:10,515 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3f/2a/49fcab403e40d161ef7d5e6b74e1c16d1377e93ff9f05a481ac2d93d5b9b/gemmi-0.5.1-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,515 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/37/6d/3abe1d11e3d5412b83bbe1e6227ed14a4e609a199b14d84c877154004130/gemmi-0.5.1-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,516 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/42/a4/e50ec4ffbbb1e2fd754f9e580b75572a452b6f2ef6b3b6a517c479c43739/gemmi-0.5.1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,516 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4c/dc/ba2300387d633bffacac2f6c9c0a68669602a15efe30b6e35dc9599685ea/gemmi-0.5.1-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,517 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/8b/78/dcabd5c547aa07eb130931089d810c21577ac7627a9b8f9a6cfc0a9db0f1/gemmi-0.5.1-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,518 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/04/da/6b9be38d955006a6dc09955cea0e6c3561b0dd3cab2d7102d25fb012d62a/gemmi-0.5.1-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,519 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0b/b0/2b9efe6a849f9fe8ee450ba0f85b6298a68696c813dc33fe3a2cdf033aea/gemmi-0.5.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,519 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b4/5a/881dd10dda412b9f8c7610a2f588fb16c9f1ec22d88811f0bfd1a2bab0d5/gemmi-0.5.1-cp39-cp39-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,520 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/27/be/57ed099c9778f29bdfcb8496cb125d802cd8e1967fcbba3b2e029e06a900/gemmi-0.5.1-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,521 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e4/1a/68c0cf47ccb39d4215b2756a4c547b99bc009233e9def8b911dad19f7523/gemmi-0.5.1-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,522 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f3/8c/06f5b496a81040137b98886745477b7eee4edf4bd896d4123bb121fc1671/gemmi-0.5.1-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,522 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/50/cb/f2b6eed33269e437d6c1a6bb1398e1738f41b3e0ee4ff403e45d5e9f119a/gemmi-0.5.1-pp38-pypy38_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,523 Found link https://files.pythonhosted.org/packages/57/65/5d3e560231481bf7c79a05d88230177e435eb4d1acdf59ccf42a716a0b02/gemmi-0.5.1.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.5.1 2023-09-16T17:43:10,524 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fd/a9/5f858b6487c4e5ab0622e6fdcdf0538c72bd50f825617150471754585acb/gemmi-0.5.2-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,525 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4b/40/d5af9e230a7ccea751437fc4b85317844e86113514e83b3f7e0393f03b40/gemmi-0.5.2-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,525 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0e/59/c560957e0664136774ffe09cca069b2b0040bd8fa24b9452d9ae1bb98102/gemmi-0.5.2-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,526 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/81/a7/be0bab8a6ffc965c5ffe54fa58185e1292549592cfe2d3b591a96b7259cc/gemmi-0.5.2-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,526 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b3/9d/bc42166366a086933cf70c4225c71ba8c138798a865c95a0ccecbc8c933f/gemmi-0.5.2-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,527 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5b/67/2344228e9a6de7cf2de55f186f97940411c21e5db626d4b0836511c986d1/gemmi-0.5.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,528 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/34/3b/979104e1d6612313a87d36ae1471d9283322c34b187360cf6ac323341c09/gemmi-0.5.2-cp310-cp310-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,529 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ea/26/fb7bb9d8046137561d4ee1e78f69efa922459fd0dbf4065547a2dace3675/gemmi-0.5.2-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,529 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d9/47/646295105e51c0022c0dc5adf2b3a6497f73e802bf741cc45b1ca5b45e65/gemmi-0.5.2-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,530 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b0/34/aa506ceccf8aad40def7f7de57e4a17384aff3ae311dca7e89a10ea9a8d1/gemmi-0.5.2-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,531 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3c/7a/6832c9ec110fa92d49c83b29a20a7c639bd20748a711b6743fa5cfd125dd/gemmi-0.5.2-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,532 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/be/15/dd9a5b7a3e7e98254ce1c991d759777c7e4e2b8b7d277e7ddbb280ed5745/gemmi-0.5.2-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,532 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/12/aa/527a757195dc72187c0ff83bf131dcf0038bf0c2e3a603a38d7fa4215527/gemmi-0.5.2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,533 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/00/fa/9f13049567db238c9d54878057964a2bbbe6487eaa44e0dfe43f91499001/gemmi-0.5.2-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,534 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a5/5d/3b545003aa183963308071286e02eabc505dc916d6fd5345a9da1016cb1c/gemmi-0.5.2-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,535 Skipping link: No binaries permitted for gemmi: 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2023-09-16T17:43:10,537 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c3/c2/26696dd217cde1c53004d6b43a94c2704c363ae16e390ea6c69bdd2239c0/gemmi-0.5.2-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,538 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fc/c5/6595cd65360e50de9ee0fe440fab1f2d0d00ded089a6fbe651fe6ae86344/gemmi-0.5.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,538 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/44/ee/a6d5ba33d69cc6fdb73effea27ff3e2ea9fd3bbe00e535902c24c098e349/gemmi-0.5.2-cp39-cp39-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,539 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/77/3e/1bb0e7f54832a84d703740394e4e88ee8a63807930bfe36dcd2e61e18b70/gemmi-0.5.2-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,540 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c5/bf/05d6199ebd6b4a78d89f7ab4679ac525ff245db1310b35fdceeed72268c5/gemmi-0.5.2-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,541 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/96/e3/46432303490b40a1db81cecac60777c45469bddf13af36e0364a8b73e98b/gemmi-0.5.2-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,541 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e2/e4/d8552659c51352812ed8eaea7c7036cd1d6816c4129521bba271342dad71/gemmi-0.5.2-pp38-pypy38_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,542 Found link https://files.pythonhosted.org/packages/05/d2/7cbd2c8ed64f30098ca929426c4581947d3a307657ad383897c6d426c352/gemmi-0.5.2.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.5.2 2023-09-16T17:43:10,543 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/55/e4/aaf93cf945278e8eafe401c439a3fa0f9872fe1403adb3615cfd98b2eeff/gemmi-0.5.3-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,544 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ac/0b/8e99c7eb4b831b9fa748d4a1c51691017c4c74960c992f45a04093df0314/gemmi-0.5.3-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,545 Skipping link: No binaries permitted for gemmi: 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https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,547 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d5/ec/bb184260b935967bb7e05f02a369ce12bb1c5ceac1376da6b567f17e0d9f/gemmi-0.5.3-cp310-cp310-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,548 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b3/b3/5c8739dc4b97a085259caa681178227ba459f239653afb39a40b18e3f78d/gemmi-0.5.3-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,548 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b9/6a/15269ce5647809592e78d29ebe0e8cc35e637b57cdd51afd508642292ee1/gemmi-0.5.3-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,549 Skipping link: No binaries permitted for gemmi: 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https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,552 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ef/1d/07b0ff9f29974b8862afda122a573c9cde0d7a076179c8b6eb8e9fbc11fe/gemmi-0.5.3-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,553 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/27/7e/c78766eca9aa7ff1e0cfc5513b60c22d34d7791c215cc6c4cbea70c7a571/gemmi-0.5.3-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,554 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5d/d7/41e2e4f53d2391fd50fe5da1b0bf61cc2411dda9ad0113137753cd5498ee/gemmi-0.5.3-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,555 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d2/01/d09bdd5e6d0b40c3193eb628c048119a0778053a68836679d7f24000e7f1/gemmi-0.5.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,555 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5f/f1/01ea751ada8a3665c06c19f7a2c0b3902735ad44c329c1dd0bc2d54181ad/gemmi-0.5.3-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,557 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/62/0b/e7bdec1e4649cf3063c561781ce0c6952c3f088bdb903c6d6b2d4d114736/gemmi-0.5.3-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,557 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/86/3c/16781083dc69d625181527455f69d8e3fd953cff5ddbb12fca049cf284ba/gemmi-0.5.3-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,558 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/20/c8/cc9d7cb994b98cd594952fdd297897ded30d9626b7200322cd8bff2f72cd/gemmi-0.5.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,558 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/60/64/9581c9bdf168eb3e20271277d4f03c0f41ad32f9e4a660f5bb3052cb65e7/gemmi-0.5.3-cp39-cp39-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,559 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/18/e0/752a99fc9677f351e1d491d8e91f5e20ddb4a3a16c584132d14051529149/gemmi-0.5.3-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,560 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/76/4f/57e247a7435cb18a1c07c9d5f0b47025ede0d54cef7e51ca1f7c9054aa44/gemmi-0.5.3-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,560 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9c/c0/27d20d226b9e1bf664d3fa5ed997ad6743dc4fe55551b8e44939c360e5f2/gemmi-0.5.3-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,561 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fa/3d/667bfc38478d2cef712c4e8069484fb240c7cbe02cb6c6a623e7b3dafd7b/gemmi-0.5.3-pp38-pypy38_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,562 Found link https://files.pythonhosted.org/packages/da/a5/9b9db3e78655c1dbaf3b23c583e198887d7a1c24f8ebfcaf7b71bf09567b/gemmi-0.5.3.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.5.3 2023-09-16T17:43:10,563 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ea/16/9cdb5f325927d94675187cce48d3f9d70a69801a0f0c0b9b9a5812335932/gemmi-0.5.4-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,564 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/34/22/280fbec5a23dbcc5657925137f5dd0568b9d1f13b55c82db21c0689cc528/gemmi-0.5.4-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,564 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d8/d3/65f7ca88c42515502eca86a82322123f83b65fb925b7adcbc8ad4d00acd8/gemmi-0.5.4-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,565 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fc/b6/7f62137922cacb64cb7c3c65a6813183c9dbf18c56743ff04496856c9e59/gemmi-0.5.4-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,566 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d7/fc/630f4ddb5f5e9a68f8cca1457675d79eb6951dd8dcc1813ab788dc649654/gemmi-0.5.4-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,567 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7e/2c/edc7d68067cc769844907e2da36785a5e6ccdf642a4958001d0644b51cd3/gemmi-0.5.4-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,568 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/bd/55/a4c35b0b4af64f09dbf804c829df1c823ca7ec88ca1749af6180ad99637c/gemmi-0.5.4-cp310-cp310-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,568 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/af/92/b8678a72f53b1c7fbbb06e1b5624d19ced139d9f19f93396b46d4650ccf1/gemmi-0.5.4-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,569 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a8/6e/0bcd81331a8b50c56414d97ffd917364c563777c443714667e39e7b02f83/gemmi-0.5.4-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,569 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3d/b6/f337087726e77a4e60be19c67c44cea3daed83ba53729bcec15ab8275b1c/gemmi-0.5.4-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,570 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/47/5a/570914192298919f5000ec857127d4f3128eaacbe336a12478002410be99/gemmi-0.5.4-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,570 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/6e/40/9b2f5eb45200eed97427e0a3355f81e01cdcd020017fef5962e10b37a822/gemmi-0.5.4-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,571 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ba/63/be97c983f4d05eb9834c63bc2af12ff079c91ca9e5704deadf6185470ab4/gemmi-0.5.4-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,572 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/dd/a5/9b9833335b38730e20103557d943896c983406df688e48b3b1d5756af918/gemmi-0.5.4-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,572 Skipping link: No binaries permitted for gemmi: 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2023-09-16T17:43:10,576 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/17/19/9135d06fdc0b4794326c0f020a658b053c9ceec94ecf272233e3de503129/gemmi-0.5.4-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,576 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d1/ff/8b5914f6ab4d7b3545a1099e5fc5f3f793cef92685e759efa487b6c4d068/gemmi-0.5.4-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,577 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/92/a5/88577ee7c9715f2f2f1e3fc81e892bffbb840598699063960957057a7995/gemmi-0.5.4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,578 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/75/82/dcef0f4314e04d5f79575def71f8311811f6699e3c36fd79153892515fd8/gemmi-0.5.4-cp39-cp39-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,579 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f4/ef/9dbe8ef4d72224b1f768f15597bc7d63a92e45bf167e13c8ebf5c759c6e2/gemmi-0.5.4-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,579 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/18/d0/1a6f551b957e99b87b2a69c04142cc12484158ad9e97782f8c7f3cfe6347/gemmi-0.5.4-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,580 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/42/4f/c0814113c10a1bef981ccc9d58e68c21994cc05f9cc524b51c38066fd914/gemmi-0.5.4-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,580 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d7/52/561df927c23e6f12a3315946d41936240b3f1059bdacaf56c738c5c69bb3/gemmi-0.5.4-pp39-pypy39_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,581 Found link https://files.pythonhosted.org/packages/f8/17/fd072a26394bbb01c9562b0090fc9282e5ca208364754b36cf30153b52e9/gemmi-0.5.4.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.5.4 2023-09-16T17:43:10,582 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ea/33/cf906ce011ccfca79c5704d4cf5691e5c2be9dffa46f159e2f792fd7f056/gemmi-0.5.5-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,582 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d2/9f/8d5439e37ad8337904a303d2d5a02027b1eacc6684449e0a19f9992d90b3/gemmi-0.5.5-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,583 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/77/d2/1531afc7535decb6b7bebbb74524ca3d4c716bb7f3a7570f0acc1a91cc34/gemmi-0.5.5-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,584 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b8/3a/a6ecf3270090f874239f38287a3eda4e7fdb071bb7e24774a23207b76c73/gemmi-0.5.5-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,585 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f8/cf/83ca23cd819854187169b6a474a5c4df6e9334762c9021ec0303f7d51765/gemmi-0.5.5-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,585 Skipping link: No binaries permitted for gemmi: 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2023-09-16T17:43:10,588 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5c/39/e809c957ba1fe10ff61af42f87b84c00f8cbaaa894db076763c9a1838fcf/gemmi-0.5.5-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,590 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/da/50/24ab02b6a771c88127e7c414e516aa71f76db1f04abd7c9491769c61e0ae/gemmi-0.5.5-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,590 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/48/9e/383f0ff461bfc73d4a00604d2a64c69443ce5e108f54eead7502d5935709/gemmi-0.5.5-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,591 Skipping link: No binaries permitted for gemmi: 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2023-09-16T17:43:10,593 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f1/64/715370a8abc99de51024107b1ea899d7cd15e0721331e61b61d950771767/gemmi-0.5.5-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,594 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/70/7e/000c77c1494a3b7b2b301b9234da30fec8ea78b5392617804cf3c4c1138b/gemmi-0.5.5-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,595 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/8e/64/5955e1602cc634e8e125f41a726a029bb75a7f4164783c79a4f174e52064/gemmi-0.5.5-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,596 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/80/c0/78d31a28e549358964a3e1e2f289e0e1a228a123329efaccff0cc9df3362/gemmi-0.5.5-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,596 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/af/ce/b6ffb1e4c451d0998f7a4723aea2423ff2f200098985ea8bcc0bca1a7e8b/gemmi-0.5.5-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,597 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f8/cb/0bcde9adb9e6f2aca5a4c713da9472be061148f5f9f5f7429136f5d52572/gemmi-0.5.5-cp39-cp39-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,598 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/56/4a/61fa7c56fc1c9995a26f34ba33b7e784e5f29ec438f10436c389d34969d6/gemmi-0.5.5-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,599 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7b/64/5e4a17a96753ac6b446b2d845b5347402d3752a4a2c6a6911d48f2ee7341/gemmi-0.5.5-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,599 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d5/07/b239263539dc2aa2f7dd30755bf4cad735861a81d31fc62a08bf8b4405c7/gemmi-0.5.5-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,600 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/48/90/3c7646c751dc39b2a0d44a4800fd61cbdae17d0207b5edbbf2c91778f5e5/gemmi-0.5.5-pp39-pypy39_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,601 Found link https://files.pythonhosted.org/packages/61/fd/6d97b18fb1875f92195eb0177d824a5778310a137fd39fa9c943ed8e5edf/gemmi-0.5.5.tar.gz (from 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2023-09-16T17:43:10,606 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/19/a0/4cd0c72f67d1a44b5b6466a8abdcf2ee84d75d81a9e4b8c240c7c24b15e5/gemmi-0.5.6-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,607 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d2/63/ca5211bfb39c1934ed40b723be97dd7efed2e50a3f56b667720e306625f2/gemmi-0.5.6-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,608 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a3/99/c454fb9a6657d21f4de67c15bb48a5158bb28b707c1bd0c402fc25695718/gemmi-0.5.6-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,608 Skipping link: No binaries permitted for gemmi: 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2023-09-16T17:43:10,611 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4e/ef/f64bc4e49cb6ee6937aa3b0227465519eda3c256fa0534f427793fdfaddc/gemmi-0.5.6-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,611 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e8/6e/8c79ba89f1f40510864f001434183bbe249842254a774c2f44a4d39f624e/gemmi-0.5.6-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,612 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0b/27/7dc4a6f04a5c9ec681c000f2c5b21b63721585902e8bbacb4c1466d8e669/gemmi-0.5.6-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,612 Skipping link: No binaries permitted for gemmi: 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2023-09-16T17:43:10,614 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a0/74/ab723bc4e967a1bc60bf3a246ce1069c6215e5e6f20c45ea111bc2ea11e2/gemmi-0.5.6-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,615 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/18/e2/037d85e2bc942e71df33b36e5551271853fdc5fe727fcc70e02405470b22/gemmi-0.5.6-pp39-pypy39_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,615 Found link https://files.pythonhosted.org/packages/d8/b9/f34297a0a44be48553a7fee2c2cb3cdae9ba629b91755becd130fcd1a4d7/gemmi-0.5.6.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.5.6 2023-09-16T17:43:10,616 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/07/4d/15b3312e17b104ef2de349d509543a43a4f02f9f9fa24764651f3e715083/gemmi-0.5.7-cp310-cp310-macosx_10_9_x86_64.whl (from 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2023-09-16T17:43:10,621 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e7/f7/699371413dde01c3775ddb9a9606c64d22e202f707a158b8b7999a5c36e9/gemmi-0.5.7-cp311-cp311-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,621 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a4/6b/b6aa72bd150c22cd5ed36c952f589bd6e135addc1a53908976fb2e27e961/gemmi-0.5.7-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,622 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c7/3e/6b22d8ba1ab0c423d5086dce986c31e54894890148bafac9cd6502928871/gemmi-0.5.7-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,622 Skipping link: No binaries permitted for gemmi: 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2023-09-16T17:43:10,625 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0e/4b/ec697a9dc25567987c188f007403de25cbcd7bebdf01d5d76f889101168d/gemmi-0.5.7-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,628 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d2/3e/d4a38d1df34cd653ebc3f969a87e83096c1cadee26b67aebb62efb197fa2/gemmi-0.5.7-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,628 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/1b/fd/7a55214ae1697d99e1477d5ca3cf1193ee12ce43474dbf92314d5a0fe8ec/gemmi-0.5.7-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,629 Skipping link: No binaries permitted for gemmi: 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(from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,634 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e8/5d/6ef13a910a48b552ef3e84231071b9cfae5ca51944139104550ba28a2da2/gemmi-0.5.8-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,634 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/01/37/5bcae9ec39b50be8e7c297693449bceb55c8037c5d3011966b7ded490f2a/gemmi-0.5.8-cp310-cp310-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,635 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9e/74/5211db7e95dc56aeb0611722b138de707800fafbc05a10a0f0e7d55e4202/gemmi-0.5.8-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,636 Skipping link: No binaries permitted for gemmi: 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2023-09-16T17:43:10,642 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/cf/aa/0c3d6233091464d8cf46d45aaf12b5cd1479abe458f0947caaeb91b69fc9/gemmi-0.5.8-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,642 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/29/62/c65abc1ce7d8e38d84ff591b07a4e18b19910ed835375100bd375b099ba4/gemmi-0.5.8-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,643 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/20/29/22d9fe974ff14d61c69da5944f55161b2387c4f74a16d615a6d67a58c737/gemmi-0.5.8-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,643 Skipping link: No binaries permitted for gemmi: 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2023-09-16T17:43:10,646 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/1f/85/b213cacd5e71ab28ae1229899773786f9e062fe2c0f563a794b3e69b28b0/gemmi-0.5.8-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,646 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/06/64/52befb7f6fdb71090c1e892bf779c6e082f8780bb4fef1b80da6a428b1c8/gemmi-0.5.8-pp39-pypy39_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,647 Found link https://files.pythonhosted.org/packages/31/c8/f3eaa51dffd731487601d5c23dc4673efe1be59e5dbe3addb2044d1838ea/gemmi-0.5.8.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.5.8 2023-09-16T17:43:10,648 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fb/9f/a9240e99a072f57a9d8acb47e1fc4470ea21837e16005d464ea2acba464c/gemmi-0.6.0-cp310-cp310-macosx_10_9_x86_64.whl (from 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2023-09-16T17:43:10,652 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a4/f5/6a1336ab3ba569643cd1a539e1fde833309c733e3d187fbba3fa4a513083/gemmi-0.6.0-cp311-cp311-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,652 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b7/43/982038c5665d615ee5d7b626c6e74b014852b51e9a79e210e06f85f03d4b/gemmi-0.6.0-cp311-cp311-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,653 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/36/e6/dd2e056f2cc07d68472ac9a167a2e492961da1daae6c9db8d3e3755b4b6f/gemmi-0.6.0-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,654 Skipping link: No binaries permitted for gemmi: 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2023-09-16T17:43:10,660 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/df/6d/ed3bce7eeb73d9076ff4fb3795936dc8710e27abc4965e2709c1cdac3a48/gemmi-0.6.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,660 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3c/a9/afeccb27445f1b37dacacd43cdce2b4c41faed56d233c823d1278add7968/gemmi-0.6.0-cp39-cp39-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,661 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/82/60/2101d761c3a95e1addaebbc09fbd2051c190c70b9a1ce8550ee855719826/gemmi-0.6.0-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,661 Skipping link: No binaries permitted for gemmi: 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Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/cd/f5/ae84e87683311fa9b2cb3ccb196588defc9bbe08c57d7fd9e0c1b97875f0/gemmi-0.6.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,668 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/02/f8/658246af5745117893f852df44aae07c7caf61502c7fc5a6711e1eb60618/gemmi-0.6.1-cp311-cp311-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,669 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/22/2a/a788ecd66793bfb22731a2e668cb05158cd96ecd8001c5036c14834c3f9e/gemmi-0.6.1-cp311-cp311-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,669 Skipping link: No binaries permitted for gemmi: 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2023-09-16T17:43:10,672 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/da/c8/722a5e08eee5b316a582fc251eb08f4fc99b1d634f2332e68eae26ba8d7f/gemmi-0.6.1-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,672 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5c/7d/756544719175bf44a52bd632c2c76746ed017c4c9f18cc552da4655c6c11/gemmi-0.6.1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,673 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a0/bf/267a4613fe7e80e11ec31a74eff645ff486198fe52c7050dc82f22cbe0ca/gemmi-0.6.1-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,674 Skipping link: No binaries permitted for gemmi: 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2023-09-16T17:43:10,676 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c9/8a/1a374d9147c4f065d1d86541871a1ddc1e19b82c0d29559c4bc12ca7e7f6/gemmi-0.6.1-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,676 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b6/8f/4b0b65112ac367bc97fdfaecaf66ee317f38b5a49a70ab504e290f4c5035/gemmi-0.6.1-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,676 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/43/d6/45cf93e379bd915e52ea55888cbe6c8707d86e5329369830d3c061850a91/gemmi-0.6.1-pp39-pypy39_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,677 Found link https://files.pythonhosted.org/packages/42/0f/9aa86fa4b44d9cceb6e0e3240c8869d3fca1d36a35ed9ed6672d02e10780/gemmi-0.6.1.tar.gz (from 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2023-09-16T17:43:10,686 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/39/63/c9b43ec4e6e1534b8201613eac97441d834774c6fc75b54ea48b2fc3672c/gemmi-0.6.2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,687 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f0/e0/a31f0c4ee2b0c66a1620ec593416e9c5360568958805604fa09b0bb5c808/gemmi-0.6.2-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,688 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0e/f9/194a7531f16bf41cc697134a3805d7fefa0a5dfd65d6f9057cafd9f24da3/gemmi-0.6.2-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,688 Skipping link: No binaries permitted for gemmi: 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link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/93/1d/80e2b1486f0ca62fa0a941ab1bc519b65b9a2d67e9aeacca938abedd1ae2/gemmi-0.6.3-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,695 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5d/f7/450ec32fd7bb8567db2a67bcfac3fb1513b7f8c1083da00a163be71ad2fb/gemmi-0.6.3-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,695 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b6/50/42ce57c58aa0e9679690f044dbaec35160d42c5581588eab6601189e4513/gemmi-0.6.3-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,696 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d2/20/b7e980dd668de2fffbb16fbeb1553b4f410f02507ec1a334976854cb7181/gemmi-0.6.3-cp310-cp310-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,697 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/63/86/eef29582562dcb5939471bcf5bff800f8b1f074fe9f50a332ba7bc4759e5/gemmi-0.6.3-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,697 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e3/07/2859d0b61e6a8c6da0284bd21e3dc25b0a3f57a715931f663e90dc6f700c/gemmi-0.6.3-cp311-cp311-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,698 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/27/50/7b8db040b17e71dc3dab6eb5f9f06d9906c5176182fae8cf17cbf7e914f7/gemmi-0.6.3-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,699 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f1/cc/699e051a8a6210709ce253b077ceb260241f5dddcc1e98be0d99a0c1a97c/gemmi-0.6.3-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,699 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/93/f7/ce33f64f767e618b8194a4ad7c6799bb0de5bd303e28ae975484ba2371cd/gemmi-0.6.3-cp311-cp311-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,700 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/49/d3/98b5a45f6ec9e7a310fca04b2d146b6bb08405707e5580bb4981d7f3ef93/gemmi-0.6.3-cp311-cp311-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,701 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/cb/41/7d3b982b3fc9895b8b53b772ef169feaa2eac45d4feacbb99a46533c3a96/gemmi-0.6.3-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,701 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0f/54/782c77c72f169030c51dc09d71f5caa5ad458d75d313565f0b74732c3750/gemmi-0.6.3-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,702 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5e/40/dd225bac00e702847dc90d6f6ac29af65e9964c6607d63b5d83f8fecbefc/gemmi-0.6.3-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,702 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c3/61/32901b67f656efb85f036d75c247499258df0bb913708a45d165d307f9a5/gemmi-0.6.3-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,703 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fb/f3/958eea26aac8e0d75fe53f2bda99e845af102704a67d842b57a99552cbc0/gemmi-0.6.3-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,703 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/84/5c/8921c5f4ac754742d68ddbde778141925bd5a4f2477ced4920518b2facbc/gemmi-0.6.3-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,703 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/18/69/19929a2fc1c0ef11721efc7fa9fd80c47556ed80e28ff4147135ddf02056/gemmi-0.6.3-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,704 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/08/ea/f7b0594184ab627e5b7bc8dd89a7c22e337965b474013724772bae475924/gemmi-0.6.3-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,705 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b4/c1/92853463305098ebad409266e674086760ab1cb2c76d993a3fe93ed8051b/gemmi-0.6.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,705 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a3/54/cbb0cfb03a52649e47c4a184f81c60a003e1d79ec84a65f47f0634d51dfa/gemmi-0.6.3-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,706 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9c/ca/3eba7e46d7bea0261a2f518396321a5873271193085613e1c024edfec3ad/gemmi-0.6.3-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,707 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b2/34/111177b73dcc8adc05c3447711c127beacb9811c922883afd82eb3fcb5d0/gemmi-0.6.3-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,707 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/17/98/a7de036d0ce4096d60d826999e40268f3237d5c1949bac8a424b448d51fb/gemmi-0.6.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,708 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/26/f2/fde6630eff028a5e859d607e9c484525b967dba792a64fec2d37d2075e9c/gemmi-0.6.3-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,708 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fb/0c/497caef7e24bdababacd7e0eb81678b215dba7b263f31b6003e54db8c53c/gemmi-0.6.3-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,709 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ce/c3/181c59a7a81bd5cc4362f923c1ba42424b0bff24ee8f4fa46da1db5778bb/gemmi-0.6.3-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,710 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/20/ed/30eedc8aa3f2c858d357c9b8dbc234560f20aac2f4b849aee3105d94377b/gemmi-0.6.3-pp39-pypy39_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-16T17:43:10,710 Found link https://files.pythonhosted.org/packages/e9/f3/8b3a4c1adf145507ed19cf58788f9a0535b78c2bee58eadae26ebf4b7e18/gemmi-0.6.3.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.6.3 2023-09-16T17:43:10,711 Fetching project page and analyzing links: https://www.piwheels.org/simple/gemmi/ 2023-09-16T17:43:10,712 Getting page https://www.piwheels.org/simple/gemmi/ 2023-09-16T17:43:10,713 Found index url https://www.piwheels.org/simple/ 2023-09-16T17:43:10,975 Fetched page https://www.piwheels.org/simple/gemmi/ as text/html 2023-09-16T17:43:11,009 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.6.3-cp39-cp39-linux_armv7l.whl#sha256=c7377c9e47775fb567659878aa2eb4c68b16c36a8fac32cccd8ebc69e183ae11 (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,010 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.6.3-cp39-cp39-linux_armv6l.whl#sha256=c7377c9e47775fb567659878aa2eb4c68b16c36a8fac32cccd8ebc69e183ae11 (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,010 Skipping link: No binaries permitted for gemmi: 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2023-09-16T17:43:11,013 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.6.2-cp37-cp37m-linux_armv7l.whl#sha256=5faf4e74a61e45bc998b0cacb48d89d5f2e3170a70327be22b562097086b5fe4 (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,014 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.6.2-cp37-cp37m-linux_armv6l.whl#sha256=5faf4e74a61e45bc998b0cacb48d89d5f2e3170a70327be22b562097086b5fe4 (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,014 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.6.1-cp39-cp39-linux_armv7l.whl#sha256=9cdf2df4d98fc1b1871947004c4a11cdbeea0f8e91792b34a470d3070df61251 (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,015 Skipping link: No binaries permitted for gemmi: 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2023-09-16T17:43:11,017 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.8-cp37-cp37m-linux_armv6l.whl#sha256=cb1712edce1e77e72d89f944731f8921a14bcacd4beca9ea2cad730f395b64ed (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,018 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.7-cp39-cp39-linux_armv7l.whl#sha256=217829361aa2e8d0bbf811ca3783233775b4d906e85ef7d483a15fabc73919ee (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,018 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.7-cp39-cp39-linux_armv6l.whl#sha256=217829361aa2e8d0bbf811ca3783233775b4d906e85ef7d483a15fabc73919ee (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,019 Skipping link: No binaries permitted for gemmi: 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2023-09-16T17:43:11,021 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.6-cp37-cp37m-linux_armv7l.whl#sha256=ebf3d9e652706444fc456143c2ad74f470a8ac3d1548b471f071a83e8d14813c (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,021 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.6-cp37-cp37m-linux_armv6l.whl#sha256=ebf3d9e652706444fc456143c2ad74f470a8ac3d1548b471f071a83e8d14813c (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,023 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.5-cp39-cp39-linux_armv7l.whl#sha256=8009bd6c9ff05ba855d46259b0947b0f0b036af556d8f91f974c1a5a3c511f27 (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,023 Skipping link: No binaries permitted for gemmi: 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2023-09-16T17:43:11,026 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.5-cp35-cp35m-linux_armv6l.whl#sha256=9467b11948268fd9f578d982bba4cfa8cd2ba910997da7191fa7babbfe48775f (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,026 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.4-cp39-cp39-linux_armv7l.whl#sha256=8ab06aa6ca1fb18e3b1725004277581551891aa0ceb007c9242dbdc61e331efc (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,027 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.4-cp39-cp39-linux_armv6l.whl#sha256=8ab06aa6ca1fb18e3b1725004277581551891aa0ceb007c9242dbdc61e331efc (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,027 Skipping link: No binaries permitted for gemmi: 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2023-09-16T17:43:11,029 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.3-cp39-cp39-linux_armv7l.whl#sha256=4d79c93b856f3b4200b588538f01b84178ece304019da3b03e6de8287b6d311a (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,030 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.3-cp39-cp39-linux_armv6l.whl#sha256=4d79c93b856f3b4200b588538f01b84178ece304019da3b03e6de8287b6d311a (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,031 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.3-cp37-cp37m-linux_armv7l.whl#sha256=3d8916944c98ec93f9bd59c9a383b4a1791583710d7476df8199f3ea86bbadb9 (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,031 Skipping link: No binaries permitted for gemmi: 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2023-09-16T17:43:11,033 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.2-cp311-cp311-linux_armv6l.whl#sha256=6cb69f924d73708cc058b7999dbbef2406cce0fb6ff45731cf062e7f32e7c4a6 (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,034 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.2-cp39-cp39-linux_armv7l.whl#sha256=a916f9b8f3aa33b7aaf544ac67c897653368dc30ecc72943055e5fcadbdd8bac (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,035 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.2-cp39-cp39-linux_armv6l.whl#sha256=a916f9b8f3aa33b7aaf544ac67c897653368dc30ecc72943055e5fcadbdd8bac (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,035 Skipping link: No binaries permitted for gemmi: 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2023-09-16T17:43:11,037 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.1-cp311-cp311-linux_armv7l.whl#sha256=05fec42dbeeab67189387347c313f971c1b5b7f3b14fa67c158c76059681bcfa (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,038 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.1-cp311-cp311-linux_armv6l.whl#sha256=05fec42dbeeab67189387347c313f971c1b5b7f3b14fa67c158c76059681bcfa (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,038 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.1-cp39-cp39-linux_armv7l.whl#sha256=bd75da08aefacc09b12aa6af459b5bb72108130848a8fcaa74f6c6c4effb1568 (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,039 Skipping link: No binaries permitted for gemmi: 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2023-09-16T17:43:11,041 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.1-cp35-cp35m-linux_armv6l.whl#sha256=b3c34bc9a9dd3f01dadf85b11a711c6f605d3cc9dbe55f93d07513a9a4200cb3 (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,042 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.0-cp311-cp311-linux_armv7l.whl#sha256=2e4d2ea5dc777de53287d968d4098868cd38dd09723620266f932d8333e5404e (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,043 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.0-cp311-cp311-linux_armv6l.whl#sha256=2e4d2ea5dc777de53287d968d4098868cd38dd09723620266f932d8333e5404e (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,043 Skipping link: No binaries permitted for gemmi: 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2023-09-16T17:43:11,057 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.7-cp39-cp39-linux_armv6l.whl#sha256=1d714c066088eb5213521e5096864257db64599979fc1064ebfbe7302199a2c6 (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,057 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.7-cp37-cp37m-linux_armv7l.whl#sha256=581b43842fd2da1beebaa4df1a87066041fb5902883a519626d81ddc6fa2469a (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,058 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.7-cp37-cp37m-linux_armv6l.whl#sha256=581b43842fd2da1beebaa4df1a87066041fb5902883a519626d81ddc6fa2469a (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,059 Skipping link: No binaries permitted for gemmi: 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https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,061 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.6-cp39-cp39-linux_armv7l.whl#sha256=7d46a4fdcea047d9b8637a04813935beb5e5da741bceb0a1d690a7839080a40a (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,061 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.6-cp39-cp39-linux_armv6l.whl#sha256=7d46a4fdcea047d9b8637a04813935beb5e5da741bceb0a1d690a7839080a40a (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,062 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.6-cp37-cp37m-linux_armv7l.whl#sha256=df534bcd0117e11f2e4a2f83c4a05ff2fa9d29d35f7525550808ebacd7f443bb (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,062 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.6-cp37-cp37m-linux_armv6l.whl#sha256=df534bcd0117e11f2e4a2f83c4a05ff2fa9d29d35f7525550808ebacd7f443bb (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,063 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.6-cp35-cp35m-linux_armv7l.whl#sha256=cd4a41dc4421d9c0691772d8f2168bb365e517ac7217cb052d6713bbccc5305e (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,063 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.6-cp35-cp35m-linux_armv6l.whl#sha256=cd4a41dc4421d9c0691772d8f2168bb365e517ac7217cb052d6713bbccc5305e (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,064 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.5-cp311-cp311-linux_armv7l.whl#sha256=272e75997c11353e112c59497e3a803d598ada949d04c94a5d43edf8f90e5202 (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,065 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.5-cp311-cp311-linux_armv6l.whl#sha256=272e75997c11353e112c59497e3a803d598ada949d04c94a5d43edf8f90e5202 (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,065 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.5-cp39-cp39-linux_armv7l.whl#sha256=7a71f294832617a72c2b09f4eb56f68efa939808bb13d315d255d45d4fe72b16 (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,066 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.5-cp39-cp39-linux_armv6l.whl#sha256=7a71f294832617a72c2b09f4eb56f68efa939808bb13d315d255d45d4fe72b16 (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,066 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.5-cp37-cp37m-linux_armv7l.whl#sha256=d38028f376b07cd6b0230bb58a4c19d5ba837b899cd8ab6640341ddbe00eaf1a (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,067 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.5-cp37-cp37m-linux_armv6l.whl#sha256=d38028f376b07cd6b0230bb58a4c19d5ba837b899cd8ab6640341ddbe00eaf1a (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,068 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.5-cp35-cp35m-linux_armv7l.whl#sha256=6442245c6774979b47c4e06491b89130ca4a49e4ccbe21dab88a9c62b66c774f (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,068 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.5-cp35-cp35m-linux_armv6l.whl#sha256=6442245c6774979b47c4e06491b89130ca4a49e4ccbe21dab88a9c62b66c774f (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,069 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.4-cp311-cp311-linux_armv7l.whl#sha256=805905c20ec5b2ca56f545a1903f22acdaa3af89d1796e20601359e74be563c8 (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,069 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.4-cp311-cp311-linux_armv6l.whl#sha256=805905c20ec5b2ca56f545a1903f22acdaa3af89d1796e20601359e74be563c8 (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,070 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.4-cp39-cp39-linux_armv7l.whl#sha256=ecb1d58813e479b6b68b682e7ad8914e31dd13b3b301dd7204a52e89ff165e0b (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,070 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.4-cp39-cp39-linux_armv6l.whl#sha256=ecb1d58813e479b6b68b682e7ad8914e31dd13b3b301dd7204a52e89ff165e0b (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,071 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.4-cp37-cp37m-linux_armv7l.whl#sha256=f902d886318bef1f63084c8abf048708dcfc1bdf639d67c16f070410c29e12db (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,071 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.4-cp37-cp37m-linux_armv6l.whl#sha256=f902d886318bef1f63084c8abf048708dcfc1bdf639d67c16f070410c29e12db (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,072 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.4-cp35-cp35m-linux_armv7l.whl#sha256=d74009113ee2e6167359cfc898acf95ba4a712e96633181a090ff7c93925f5ce (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,072 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.4-cp35-cp35m-linux_armv6l.whl#sha256=d74009113ee2e6167359cfc898acf95ba4a712e96633181a090ff7c93925f5ce (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,073 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.3-cp311-cp311-linux_armv7l.whl#sha256=11d377c920d577461a07eccaf78ff9f4062d4a8838180369067df65070587cdb (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,074 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.3-cp311-cp311-linux_armv6l.whl#sha256=11d377c920d577461a07eccaf78ff9f4062d4a8838180369067df65070587cdb (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,074 Skipping link: No binaries permitted for gemmi: 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2023-09-16T17:43:11,077 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.3-cp35-cp35m-linux_armv7l.whl#sha256=b2677502c3949c461c4e6b1f2dca53fc07af03da210f8aaa0b1cb868cefbf662 (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,077 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.3-cp35-cp35m-linux_armv6l.whl#sha256=b2677502c3949c461c4e6b1f2dca53fc07af03da210f8aaa0b1cb868cefbf662 (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,078 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.7-cp39-cp39-linux_armv7l.whl#sha256=d18908fbee345739936f350997077c40e37e833fe6d7d1321687b24a37f65eda (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,078 Skipping link: No binaries permitted for gemmi: 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2023-09-16T17:43:11,080 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.2-cp39-cp39-linux_armv6l.whl#sha256=39a8c7fb3ec3f9763f6805693416f2c075f33692d8523980a858d067fe9c69e9 (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,081 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.1-cp39-cp39-linux_armv7l.whl#sha256=8645b322266bef190cd2cc053a0943d9bb5b400f493ae0a4fb479dbcc4180950 (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,081 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.1-cp39-cp39-linux_armv6l.whl#sha256=8645b322266bef190cd2cc053a0943d9bb5b400f493ae0a4fb479dbcc4180950 (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,082 Skipping link: No binaries permitted for gemmi: 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2023-09-16T17:43:11,085 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.6-cp35-cp35m-linux_armv6l.whl#sha256=77f0f92c7f827784be41462b3969ebc0ad0b49796c999503f2633c2f476a18de (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,086 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.6-cp35-cp35m-linux_armv7l.whl#sha256=77f0f92c7f827784be41462b3969ebc0ad0b49796c999503f2633c2f476a18de (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,086 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.5-cp39-cp39-linux_armv7l.whl#sha256=c8b98718817bb2bce5cae6905eec804b07e480eb6a77265fa85c5fe8e3a759dc (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,086 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.5-cp39-cp39-linux_armv6l.whl#sha256=c8b98718817bb2bce5cae6905eec804b07e480eb6a77265fa85c5fe8e3a759dc (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,087 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.5-cp35-cp35m-linux_armv7l.whl#sha256=22b6cb0c5699f26be92623b5d8bd5e48c4252e647379c9259837689a13f069b8 (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,087 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.5-cp35-cp35m-linux_armv6l.whl#sha256=22b6cb0c5699f26be92623b5d8bd5e48c4252e647379c9259837689a13f069b8 (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,088 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.4-cp39-cp39-linux_armv7l.whl#sha256=f7084d7d7c2387e74a7745b09eb5311a55cd2d8effa42e3234b63173cac6ed4d (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,088 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.4-cp39-cp39-linux_armv6l.whl#sha256=f7084d7d7c2387e74a7745b09eb5311a55cd2d8effa42e3234b63173cac6ed4d (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,089 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.3-cp35-cp35m-linux_armv6l.whl#sha256=43cdde23b2327d4232b8dc272394d07e1ef9244fa065cd3a5098a832b7de5ec6 (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,089 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.3-cp35-cp35m-linux_armv7l.whl#sha256=43cdde23b2327d4232b8dc272394d07e1ef9244fa065cd3a5098a832b7de5ec6 (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,090 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.2-cp35-cp35m-linux_armv7l.whl#sha256=a6d8bd66cc25d6b9604268b1b1602fd3e3128f5bd756f797d117b79de41bbaa3 (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,091 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.2-cp35-cp35m-linux_armv6l.whl#sha256=a6d8bd66cc25d6b9604268b1b1602fd3e3128f5bd756f797d117b79de41bbaa3 (from https://www.piwheels.org/simple/gemmi/) 2023-09-16T17:43:11,091 Skipping link: not a file: https://www.piwheels.org/simple/gemmi/ 2023-09-16T17:43:11,092 Skipping link: not a file: https://pypi.org/simple/gemmi/ 2023-09-16T17:43:11,115 Given no hashes to check 1 links for project 'gemmi': discarding no candidates 2023-09-16T17:43:11,133 Collecting gemmi==0.5.3 2023-09-16T17:43:11,135 Created temporary directory: /tmp/pip-unpack-q1w1xkyh 2023-09-16T17:43:11,361 Downloading gemmi-0.5.3.tar.gz (692 kB) 2023-09-16T17:43:12,096 Added gemmi==0.5.3 from https://files.pythonhosted.org/packages/da/a5/9b9db3e78655c1dbaf3b23c583e198887d7a1c24f8ebfcaf7b71bf09567b/gemmi-0.5.3.tar.gz to build tracker '/tmp/pip-build-tracker-4ext5uxt' 2023-09-16T17:43:12,098 Running setup.py (path:/tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/setup.py) egg_info for package gemmi 2023-09-16T17:43:12,099 Created temporary directory: /tmp/pip-pip-egg-info-zlqkfzch 2023-09-16T17:43:12,100 Preparing metadata (setup.py): started 2023-09-16T17:43:12,101 Running command python setup.py egg_info 2023-09-16T17:43:12,942 /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:80: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2023-09-16T17:43:12,942 !! 2023-09-16T17:43:12,943 ******************************************************************************** 2023-09-16T17:43:12,944 Requirements should be satisfied by a PEP 517 installer. 2023-09-16T17:43:12,944 If you are using pip, you can try `pip install --use-pep517`. 2023-09-16T17:43:12,944 ******************************************************************************** 2023-09-16T17:43:12,945 !! 2023-09-16T17:43:12,946 dist.fetch_build_eggs(dist.setup_requires) 2023-09-16T17:43:15,723 running egg_info 2023-09-16T17:43:15,724 creating /tmp/pip-pip-egg-info-zlqkfzch/gemmi.egg-info 2023-09-16T17:43:15,752 writing /tmp/pip-pip-egg-info-zlqkfzch/gemmi.egg-info/PKG-INFO 2023-09-16T17:43:15,755 writing dependency_links to /tmp/pip-pip-egg-info-zlqkfzch/gemmi.egg-info/dependency_links.txt 2023-09-16T17:43:15,757 writing top-level names to /tmp/pip-pip-egg-info-zlqkfzch/gemmi.egg-info/top_level.txt 2023-09-16T17:43:15,759 writing manifest file '/tmp/pip-pip-egg-info-zlqkfzch/gemmi.egg-info/SOURCES.txt' 2023-09-16T17:43:15,874 reading manifest file '/tmp/pip-pip-egg-info-zlqkfzch/gemmi.egg-info/SOURCES.txt' 2023-09-16T17:43:15,875 reading manifest template 'MANIFEST.in' 2023-09-16T17:43:15,975 adding license file 'LICENSE.txt' 2023-09-16T17:43:15,987 writing manifest file '/tmp/pip-pip-egg-info-zlqkfzch/gemmi.egg-info/SOURCES.txt' 2023-09-16T17:43:16,098 Preparing metadata (setup.py): finished with status 'done' 2023-09-16T17:43:16,102 Source in /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657 has version 0.5.3, which satisfies requirement gemmi==0.5.3 from https://files.pythonhosted.org/packages/da/a5/9b9db3e78655c1dbaf3b23c583e198887d7a1c24f8ebfcaf7b71bf09567b/gemmi-0.5.3.tar.gz 2023-09-16T17:43:16,103 Removed gemmi==0.5.3 from https://files.pythonhosted.org/packages/da/a5/9b9db3e78655c1dbaf3b23c583e198887d7a1c24f8ebfcaf7b71bf09567b/gemmi-0.5.3.tar.gz from build tracker '/tmp/pip-build-tracker-4ext5uxt' 2023-09-16T17:43:16,107 Created temporary directory: /tmp/pip-unpack-048fsqy6 2023-09-16T17:43:16,108 Created temporary directory: /tmp/pip-unpack-bmyyc0l6 2023-09-16T17:43:16,111 Building wheels for collected packages: gemmi 2023-09-16T17:43:16,114 Created temporary directory: /tmp/pip-wheel-fr5tcixc 2023-09-16T17:43:16,115 Building wheel for gemmi (setup.py): started 2023-09-16T17:43:16,116 Destination directory: /tmp/pip-wheel-fr5tcixc 2023-09-16T17:43:16,117 Running command python setup.py bdist_wheel 2023-09-16T17:43:16,934 /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:80: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2023-09-16T17:43:16,934 !! 2023-09-16T17:43:16,935 ******************************************************************************** 2023-09-16T17:43:16,936 Requirements should be satisfied by a PEP 517 installer. 2023-09-16T17:43:16,936 If you are using pip, you can try `pip install --use-pep517`. 2023-09-16T17:43:16,937 ******************************************************************************** 2023-09-16T17:43:16,938 !! 2023-09-16T17:43:16,938 dist.fetch_build_eggs(dist.setup_requires) 2023-09-16T17:43:17,274 running bdist_wheel 2023-09-16T17:43:17,349 running build 2023-09-16T17:43:17,350 running build_py 2023-09-16T17:43:17,378 creating build 2023-09-16T17:43:17,378 creating build/lib.linux-armv7l-cpython-311 2023-09-16T17:43:17,379 creating build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-16T17:43:17,380 copying examples/simple_search.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-16T17:43:17,382 copying examples/aafreq.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-16T17:43:17,384 copying examples/weight.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-16T17:43:17,386 copying examples/mtz_i_sigi.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-16T17:43:17,387 copying examples/__init__.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-16T17:43:17,388 copying examples/sub_ccd.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-16T17:43:17,390 copying examples/merge_mtz_mmcif.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-16T17:43:17,391 copying examples/rama_gather.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-16T17:43:17,393 copying examples/maskcheck.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-16T17:43:17,394 copying examples/from_json.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-16T17:43:17,396 copying examples/long_geom.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-16T17:43:17,397 copying examples/multiproc.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-16T17:43:17,399 copying examples/col_order.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-16T17:43:17,400 copying examples/matthews.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-16T17:43:17,402 copying examples/hello.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-16T17:43:17,403 copying examples/monomers.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-16T17:43:17,405 copying examples/maskdiff.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-16T17:43:17,407 copying examples/map2mtz.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-16T17:43:17,409 copying examples/ccd_gi.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-16T17:43:17,410 copying examples/rama_plot.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-16T17:43:17,412 copying examples/ccd_subgraph.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-16T17:43:17,413 copying examples/__main__.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-16T17:43:17,415 copying examples/cif_i_sigi.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-16T17:43:17,416 copying examples/mtrix_iso.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-16T17:43:17,418 copying examples/patterson_slice.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-16T17:43:17,421 running build_clib 2023-09-16T17:43:17,453 building 'gemmi_zlib' library 2023-09-16T17:43:17,454 creating build/temp.linux-armv7l-cpython-311 2023-09-16T17:43:17,454 creating build/temp.linux-armv7l-cpython-311/third_party 2023-09-16T17:43:17,455 creating build/temp.linux-armv7l-cpython-311/third_party/zlib 2023-09-16T17:43:17,456 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/adler32.c -o build/temp.linux-armv7l-cpython-311/third_party/zlib/adler32.o 2023-09-16T17:43:17,813 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/crc32.c -o build/temp.linux-armv7l-cpython-311/third_party/zlib/crc32.o 2023-09-16T17:43:18,267 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/gzlib.c -o build/temp.linux-armv7l-cpython-311/third_party/zlib/gzlib.o 2023-09-16T17:43:18,745 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/gzread.c -o build/temp.linux-armv7l-cpython-311/third_party/zlib/gzread.o 2023-09-16T17:43:19,343 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/inffast.c -o build/temp.linux-armv7l-cpython-311/third_party/zlib/inffast.o 2023-09-16T17:43:19,750 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/inflate.c -o build/temp.linux-armv7l-cpython-311/third_party/zlib/inflate.o 2023-09-16T17:43:21,852 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/inftrees.c -o build/temp.linux-armv7l-cpython-311/third_party/zlib/inftrees.o 2023-09-16T17:43:22,210 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/zutil.c -o build/temp.linux-armv7l-cpython-311/third_party/zlib/zutil.o 2023-09-16T17:43:22,377 arm-linux-gnueabihf-gcc-ar rcs build/temp.linux-armv7l-cpython-311/libgemmi_zlib.a build/temp.linux-armv7l-cpython-311/third_party/zlib/adler32.o build/temp.linux-armv7l-cpython-311/third_party/zlib/crc32.o build/temp.linux-armv7l-cpython-311/third_party/zlib/gzlib.o build/temp.linux-armv7l-cpython-311/third_party/zlib/gzread.o build/temp.linux-armv7l-cpython-311/third_party/zlib/inffast.o build/temp.linux-armv7l-cpython-311/third_party/zlib/inflate.o build/temp.linux-armv7l-cpython-311/third_party/zlib/inftrees.o build/temp.linux-armv7l-cpython-311/third_party/zlib/zutil.o 2023-09-16T17:43:22,402 running build_ext 2023-09-16T17:43:22,405 creating tmp 2023-09-16T17:43:22,406 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c /tmp/tmpg6cycsyg.cpp -o tmp/tmpg6cycsyg.o -std=c++17 2023-09-16T17:43:22,482 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c /tmp/tmpq2gbd92d.cpp -o tmp/tmpq2gbd92d.o -fvisibility=hidden 2023-09-16T17:43:22,556 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c /tmp/tmpj16vxere.cpp -o tmp/tmpj16vxere.o -g0 2023-09-16T17:43:22,635 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c /tmp/tmph9o0s_vw.cpp -o tmp/tmph9o0s_vw.o -Wl,-s 2023-09-16T17:43:23,256 building 'gemmi' extension 2023-09-16T17:43:23,266 creating build/temp.linux-armv7l-cpython-311/python 2023-09-16T17:43:23,267 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.3\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/align.cpp -o build/temp.linux-armv7l-cpython-311/python/align.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T17:43:53,627 In file included from /usr/include/c++/12/vector:70, 2023-09-16T17:43:53,627 from include/gemmi/model.hpp:15, 2023-09-16T17:43:53,628 from include/gemmi/align.hpp:8, 2023-09-16T17:43:53,629 from python/align.cpp:3: 2023-09-16T17:43:53,629 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator, iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’: 2023-09-16T17:43:53,631 /usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:43:53,631 189 | vector<_Tp, _Alloc>:: 2023-09-16T17:43:53,632 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:43:53,632 /usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:43:56,192 In file included from /usr/include/c++/12/vector:64: 2023-09-16T17:43:56,192 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-16T17:43:56,193 inlined from ‘void gemmi::vector_remove_if(std::vector&, F&&) [with T = Atom; F = Selection::remove_not_selected(gemmi::Residue&) const::]’ at include/gemmi/util.hpp:245:10, 2023-09-16T17:43:56,194 inlined from ‘void gemmi::Selection::remove_not_selected(T&) const [with T = gemmi::Residue]’ at include/gemmi/select.hpp:273:21, 2023-09-16T17:43:56,194 inlined from ‘void gemmi::Selection::remove_not_selected(T&) const [with T = gemmi::Chain]’ at include/gemmi/select.hpp:275:26, 2023-09-16T17:43:56,195 inlined from ‘void gemmi::Selection::remove_not_selected(T&) const [with T = gemmi::Model]’ at include/gemmi/select.hpp:275:26: 2023-09-16T17:43:56,196 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:43:56,196 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-16T17:43:56,197 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:43:56,760 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-16T17:43:56,760 inlined from ‘void gemmi::vector_remove_if(std::vector&, F&&) [with T = Atom; F = Selection::remove_selected(gemmi::Residue&) const::]’ at include/gemmi/util.hpp:245:10, 2023-09-16T17:43:56,761 inlined from ‘void gemmi::Selection::remove_selected(gemmi::Residue&) const’ at include/gemmi/select.hpp:268:23, 2023-09-16T17:43:56,762 inlined from ‘void gemmi::Selection::remove_selected(T&) const [with T = gemmi::Chain]’ at include/gemmi/select.hpp:259:24, 2023-09-16T17:43:56,762 inlined from ‘void gemmi::Selection::remove_selected(T&) const [with T = gemmi::Model]’ at include/gemmi/select.hpp:259:24: 2023-09-16T17:43:56,763 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:43:56,763 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-16T17:43:56,764 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:43:59,761 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Position&}; _Tp = gemmi::Position; _Alloc = std::allocator]’: 2023-09-16T17:43:59,761 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:43:59,762 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:43:59,763 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:00,491 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::SupResult}; _Tp = gemmi::SupResult; _Alloc = std::allocator]’: 2023-09-16T17:44:00,492 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:44:00,526 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::SupResult}; _Tp = gemmi::SupResult; _Alloc = std::allocator]’: 2023-09-16T17:44:00,526 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:00,527 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T17:44:00,527 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:00,606 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Selection::AtomInequality}; _Tp = gemmi::Selection::AtomInequality; _Alloc = std::allocator]’: 2023-09-16T17:44:00,607 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:44:00,607 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:44:00,608 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:08,370 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Selection::AtomInequality}; _Tp = gemmi::Selection::AtomInequality; _Alloc = std::allocator]’, 2023-09-16T17:44:08,371 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Selection::AtomInequality; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-16T17:44:08,371 inlined from ‘void gemmi::impl::parse_cid(const std::string&, gemmi::Selection&)’ at include/gemmi/select.hpp:438:40: 2023-09-16T17:44:08,372 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:08,373 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T17:44:08,373 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:15,538 In file included from python/common.h:3, 2023-09-16T17:44:15,538 from python/align.cpp:7: 2023-09-16T17:44:15,539 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access, gemmi::Atom> >, gemmi::Atom&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = gemmi::BidirIterator, gemmi::Atom> >; Sentinel = gemmi::BidirIterator, gemmi::Atom> >; ValueType = gemmi::Atom&; Extra = {}]’: 2023-09-16T17:44:15,540 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-16T17:44:15,540 2372 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) { 2023-09-16T17:44:15,541 | ^~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:15,542 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-16T17:44:15,615 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = gemmi::BidirIterator, gemmi::Atom> >; Sentinel = gemmi::BidirIterator, gemmi::Atom> >; ValueType = gemmi::Atom&; Extra = {}]’, 2023-09-16T17:44:15,616 inlined from ‘pybind11::iterator pybind11::make_iterator(Type&, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Type = gemmi::FilterProxy; Extra = {}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2457:74: 2023-09-16T17:44:15,616 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-16T17:44:15,617 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-16T17:44:15,617 | ^ 2023-09-16T17:44:15,618 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-16T17:44:18,113 In file included from /usr/include/c++/12/vector:63: 2023-09-16T17:44:18,113 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*]’: 2023-09-16T17:44:18,114 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:18,115 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-16T17:44:18,116 | ^~~~~~~~~~~~~~~~ 2023-09-16T17:44:18,116 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:19,274 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*]’: 2023-09-16T17:44:19,275 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:19,276 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:20,396 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Position; _Alloc = std::allocator]’, 2023-09-16T17:44:20,397 inlined from ‘void gemmi::prepare_positions_for_superposition(std::vector&, std::vector&, ConstResidueSpan, ConstResidueSpan, PolymerType, SupSelect, char, std::vector*)’ at include/gemmi/align.hpp:188:29: 2023-09-16T17:44:20,397 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:20,398 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:44:20,398 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:44:20,399 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Position; _Alloc = std::allocator]’, 2023-09-16T17:44:20,399 inlined from ‘void gemmi::prepare_positions_for_superposition(std::vector&, std::vector&, ConstResidueSpan, ConstResidueSpan, PolymerType, SupSelect, char, std::vector*)’ at include/gemmi/align.hpp:189:29: 2023-09-16T17:44:20,400 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:20,400 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:44:20,401 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:44:20,401 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Position; _Alloc = std::allocator]’, 2023-09-16T17:44:20,402 inlined from ‘void gemmi::prepare_positions_for_superposition(std::vector&, std::vector&, ConstResidueSpan, ConstResidueSpan, PolymerType, SupSelect, char, std::vector*)’ at include/gemmi/align.hpp:196:31: 2023-09-16T17:44:20,402 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:20,403 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:44:20,404 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:44:20,405 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Position; _Alloc = std::allocator]’, 2023-09-16T17:44:20,405 inlined from ‘void gemmi::prepare_positions_for_superposition(std::vector&, std::vector&, ConstResidueSpan, ConstResidueSpan, PolymerType, SupSelect, char, std::vector*)’ at include/gemmi/align.hpp:197:31: 2023-09-16T17:44:20,406 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:20,407 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:44:20,407 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:44:25,249 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*]’: 2023-09-16T17:44:25,250 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:25,251 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-16T17:44:25,252 | ^~~~~~~~~~~~~~~~ 2023-09-16T17:44:25,252 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:25,411 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*; bool _TrivialValueTypes = false]’, 2023-09-16T17:44:25,411 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:44:25,412 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*; _Tp = gemmi::ExperimentInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:44:25,412 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::ExperimentInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-16T17:44:25,413 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::ExperimentInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-16T17:44:25,414 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:25,414 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:44:25,415 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:25,585 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Atom}; _Tp = gemmi::Atom; _Alloc = std::allocator]’: 2023-09-16T17:44:25,586 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:44:25,587 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:44:25,587 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:25,743 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Atom}; _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-16T17:44:25,744 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-16T17:44:25,744 inlined from ‘void gemmi::Selection::add_matching_children(const T&, T&) const [with T = gemmi::Residue]’ at include/gemmi/select.hpp:233:36, 2023-09-16T17:44:25,745 inlined from ‘void gemmi::Selection::add_matching_children(const T&, T&) const [with T = gemmi::Chain]’ at include/gemmi/select.hpp:234:30: 2023-09-16T17:44:25,746 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:25,747 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T17:44:25,748 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:26,459 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Position; _Alloc = std::allocator]’, 2023-09-16T17:44:26,460 inlined from ‘bool pybind11::detail::list_caster::load(pybind11::handle, bool) [with Type = std::vector; Value = gemmi::Position]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl.h:180:28: 2023-09-16T17:44:26,461 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:26,461 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:44:26,462 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:44:27,039 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2023-09-16T17:44:27,040 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:44:27,041 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:44:27,041 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:27,102 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, 2023-09-16T17:44:27,102 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-16T17:44:27,103 inlined from ‘bool pybind11::detail::list_caster::load(pybind11::handle, bool) [with Type = std::vector; Value = double]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl.h:180:28: 2023-09-16T17:44:27,104 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:27,104 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T17:44:27,105 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:28,349 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo::Restr*]’: 2023-09-16T17:44:28,350 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:28,350 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-16T17:44:28,351 | ^~~~~~~~~~~~~~~~ 2023-09-16T17:44:28,352 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:28,433 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo::Restr*; bool _TrivialValueTypes = false]’, 2023-09-16T17:44:28,434 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo::Restr*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:44:28,435 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo::Restr*; _Tp = gemmi::RefinementInfo::Restr]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:44:28,436 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::RefinementInfo::Restr; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-16T17:44:28,436 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::RefinementInfo::Restr; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-16T17:44:28,437 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:28,437 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:44:28,438 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:28,529 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::DiffractionInfo*]’: 2023-09-16T17:44:28,530 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:28,531 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-16T17:44:28,532 | ^~~~~~~~~~~~~~~~ 2023-09-16T17:44:28,532 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:28,574 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*]’: 2023-09-16T17:44:28,575 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:28,576 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:28,576 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::DiffractionInfo*; bool _TrivialValueTypes = false]’, 2023-09-16T17:44:28,577 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::DiffractionInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:44:28,578 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::DiffractionInfo*; _Tp = gemmi::DiffractionInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:44:28,579 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::DiffractionInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T17:44:28,579 inlined from ‘gemmi::CrystalInfo::CrystalInfo(const gemmi::CrystalInfo&)’ at include/gemmi/metadata.hpp:79:8, 2023-09-16T17:44:28,580 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = gemmi::CrystalInfo; _Args = {const gemmi::CrystalInfo&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-16T17:44:28,580 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21: 2023-09-16T17:44:28,581 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:28,581 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:44:28,582 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:28,686 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::DiffractionInfo*; bool _TrivialValueTypes = false]’, 2023-09-16T17:44:28,687 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::DiffractionInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:44:28,688 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::DiffractionInfo*; _Tp = gemmi::DiffractionInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:44:28,688 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::DiffractionInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-16T17:44:28,689 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::DiffractionInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-16T17:44:28,690 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:28,691 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:44:28,691 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:28,907 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*; bool _TrivialValueTypes = false]’, 2023-09-16T17:44:28,907 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:44:28,908 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*; _Tp = gemmi::CrystalInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:44:28,909 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::CrystalInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-16T17:44:28,909 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::CrystalInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-16T17:44:28,910 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:28,910 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:44:28,911 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:28,912 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::DiffractionInfo*; bool _TrivialValueTypes = false]’, 2023-09-16T17:44:28,912 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::DiffractionInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:44:28,913 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::DiffractionInfo*; _Tp = gemmi::DiffractionInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:44:28,914 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::DiffractionInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T17:44:28,915 inlined from ‘gemmi::CrystalInfo::CrystalInfo(const gemmi::CrystalInfo&)’ at include/gemmi/metadata.hpp:79:8, 2023-09-16T17:44:28,915 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = gemmi::CrystalInfo; _Args = {gemmi::CrystalInfo&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-16T17:44:28,916 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = gemmi::CrystalInfo*; _ForwardIterator = gemmi::CrystalInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21, 2023-09-16T17:44:28,916 inlined from ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = gemmi::CrystalInfo*; _ForwardIterator = gemmi::CrystalInfo*; bool _TrivialValueTypes = false]’ at /usr/include/c++/12/bits/stl_uninitialized.h:137:32, 2023-09-16T17:44:28,917 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = gemmi::CrystalInfo*; _ForwardIterator = gemmi::CrystalInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:44:28,918 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = gemmi::CrystalInfo*; _ForwardIterator = gemmi::CrystalInfo*; _Tp = gemmi::CrystalInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:44:28,918 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::CrystalInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:251:35: 2023-09-16T17:44:28,919 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:28,920 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:44:28,920 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:29,074 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*]’: 2023-09-16T17:44:29,075 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:29,075 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-16T17:44:29,076 | ^~~~~~~~~~~~~~~~ 2023-09-16T17:44:29,077 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:29,154 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; bool _TrivialValueTypes = false]’, 2023-09-16T17:44:29,155 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:44:29,156 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; _Tp = gemmi::Assembly::Operator]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:44:29,157 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-16T17:44:29,157 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-16T17:44:29,158 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:29,158 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:44:29,158 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:29,237 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; bool _TrivialValueTypes = false]’, 2023-09-16T17:44:29,238 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:44:29,238 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; _Tp = gemmi::Assembly::Operator]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:44:29,239 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T17:44:29,240 inlined from ‘gemmi::Assembly::Gen::Gen(const gemmi::Assembly::Gen&)’ at include/gemmi/metadata.hpp:312:10, 2023-09-16T17:44:29,240 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = gemmi::Assembly::Gen; _Args = {const gemmi::Assembly::Gen&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-16T17:44:29,241 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Gen*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21: 2023-09-16T17:44:29,242 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:29,242 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:44:29,243 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:29,411 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; bool _TrivialValueTypes = false]’, 2023-09-16T17:44:29,411 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:44:29,412 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; _Tp = gemmi::Assembly::Operator]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:44:29,412 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T17:44:29,413 inlined from ‘gemmi::Assembly::Gen::Gen(const gemmi::Assembly::Gen&)’ at include/gemmi/metadata.hpp:312:10, 2023-09-16T17:44:29,413 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = gemmi::Assembly::Gen; _Args = {gemmi::Assembly::Gen&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-16T17:44:29,414 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = gemmi::Assembly::Gen*; _ForwardIterator = gemmi::Assembly::Gen*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21, 2023-09-16T17:44:29,415 inlined from ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = gemmi::Assembly::Gen*; _ForwardIterator = gemmi::Assembly::Gen*; bool _TrivialValueTypes = false]’ at /usr/include/c++/12/bits/stl_uninitialized.h:137:32, 2023-09-16T17:44:29,416 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = gemmi::Assembly::Gen*; _ForwardIterator = gemmi::Assembly::Gen*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:44:29,416 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = gemmi::Assembly::Gen*; _ForwardIterator = gemmi::Assembly::Gen*; _Tp = gemmi::Assembly::Gen]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:44:29,417 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly::Gen; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:251:35: 2023-09-16T17:44:29,418 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:29,418 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:44:29,419 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:29,568 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*]’: 2023-09-16T17:44:29,569 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:29,570 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-16T17:44:29,571 | ^~~~~~~~~~~~~~~~ 2023-09-16T17:44:29,571 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:29,793 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*]’: 2023-09-16T17:44:29,793 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:29,794 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:29,871 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo::Restr*; bool _TrivialValueTypes = false]’, 2023-09-16T17:44:29,872 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo::Restr*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:44:29,873 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo::Restr*; _Tp = gemmi::RefinementInfo::Restr]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:44:29,874 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::RefinementInfo::Restr; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T17:44:29,875 inlined from ‘gemmi::RefinementInfo::RefinementInfo(const gemmi::RefinementInfo&)’ at include/gemmi/metadata.hpp:117:8: 2023-09-16T17:44:29,875 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:29,876 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:44:29,877 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:29,877 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*; bool _TrivialValueTypes = false]’, 2023-09-16T17:44:29,878 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:44:29,879 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*; _Tp = gemmi::TlsGroup]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:44:29,880 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::TlsGroup; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T17:44:29,880 inlined from ‘gemmi::RefinementInfo::RefinementInfo(const gemmi::RefinementInfo&)’ at include/gemmi/metadata.hpp:117:8: 2023-09-16T17:44:29,881 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:29,882 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:44:29,882 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:29,945 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*]’: 2023-09-16T17:44:29,946 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:29,947 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-16T17:44:29,947 | ^~~~~~~~~~~~~~~~ 2023-09-16T17:44:29,948 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:29,991 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*; bool _TrivialValueTypes = false]’, 2023-09-16T17:44:29,992 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:44:29,993 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*; _Tp = gemmi::ExperimentInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:44:29,994 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::ExperimentInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T17:44:29,994 inlined from ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’ at include/gemmi/metadata.hpp:146:8: 2023-09-16T17:44:29,995 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:29,996 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:44:29,997 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:29,997 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*; bool _TrivialValueTypes = false]’, 2023-09-16T17:44:29,998 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:44:29,998 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*; _Tp = gemmi::CrystalInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:44:29,999 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::CrystalInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T17:44:29,999 inlined from ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’ at include/gemmi/metadata.hpp:146:8: 2023-09-16T17:44:30,000 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:30,001 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:44:30,001 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:30,002 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*; bool _TrivialValueTypes = false]’, 2023-09-16T17:44:30,003 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:44:30,004 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*; _Tp = gemmi::RefinementInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:44:30,004 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::RefinementInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T17:44:30,005 inlined from ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’ at include/gemmi/metadata.hpp:146:8: 2023-09-16T17:44:30,006 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:30,006 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:44:30,007 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:30,151 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*; bool _TrivialValueTypes = false]’, 2023-09-16T17:44:30,152 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:44:30,152 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*; _Tp = gemmi::NcsOp]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:44:30,153 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T17:44:30,153 inlined from ‘gemmi::Structure::Structure(const gemmi::Structure&)’ at include/gemmi/model.hpp:859:8: 2023-09-16T17:44:30,154 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:30,154 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:44:30,155 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:30,156 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*; bool _TrivialValueTypes = false]’, 2023-09-16T17:44:30,157 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:44:30,157 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*; _Tp = gemmi::Connection]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:44:30,158 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T17:44:30,159 inlined from ‘gemmi::Structure::Structure(const gemmi::Structure&)’ at include/gemmi/model.hpp:859:8: 2023-09-16T17:44:30,160 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:30,160 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:44:30,161 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:30,162 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; bool _TrivialValueTypes = false]’, 2023-09-16T17:44:30,163 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:44:30,164 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; _Tp = gemmi::Assembly]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:44:30,164 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T17:44:30,165 inlined from ‘gemmi::Structure::Structure(const gemmi::Structure&)’ at include/gemmi/model.hpp:859:8: 2023-09-16T17:44:30,165 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:30,166 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:44:30,166 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:30,385 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*; bool _TrivialValueTypes = false]’, 2023-09-16T17:44:30,386 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:44:30,387 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*; _Tp = gemmi::TlsGroup]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:44:30,387 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::TlsGroup; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-16T17:44:30,388 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::TlsGroup; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-16T17:44:30,389 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:30,389 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:44:30,390 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:31,611 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*; bool _TrivialValueTypes = false]’, 2023-09-16T17:44:31,611 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:44:31,612 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*; _Tp = gemmi::NcsOp]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:44:31,613 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::NcsOp; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-16T17:44:31,614 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44, 2023-09-16T17:44:31,614 inlined from ‘gemmi::Structure gemmi::Structure::empty_copy() const’ at include/gemmi/model.hpp:985:14: 2023-09-16T17:44:31,615 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:31,615 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:44:31,616 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:31,617 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*; bool _TrivialValueTypes = false]’, 2023-09-16T17:44:31,618 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:44:31,618 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*; _Tp = gemmi::Connection]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:44:31,619 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Connection; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-16T17:44:31,620 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44, 2023-09-16T17:44:31,620 inlined from ‘gemmi::Structure gemmi::Structure::empty_copy() const’ at include/gemmi/model.hpp:987:22: 2023-09-16T17:44:31,621 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:31,622 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:44:31,622 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:31,625 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; bool _TrivialValueTypes = false]’, 2023-09-16T17:44:31,625 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:44:31,626 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; _Tp = gemmi::Assembly]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:44:31,626 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-16T17:44:31,627 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44, 2023-09-16T17:44:31,628 inlined from ‘gemmi::Structure gemmi::Structure::empty_copy() const’ at include/gemmi/model.hpp:990:21: 2023-09-16T17:44:31,628 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:31,629 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:44:31,630 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:31,630 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*; bool _TrivialValueTypes = false]’, 2023-09-16T17:44:31,631 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:44:31,632 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*; _Tp = gemmi::RefinementInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:44:31,633 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::RefinementInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-16T17:44:31,633 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::RefinementInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44, 2023-09-16T17:44:31,634 inlined from ‘gemmi::Metadata& gemmi::Metadata::operator=(const gemmi::Metadata&)’ at include/gemmi/metadata.hpp:146:8, 2023-09-16T17:44:31,635 inlined from ‘gemmi::Structure gemmi::Structure::empty_copy() const’ at include/gemmi/model.hpp:991:15: 2023-09-16T17:44:31,636 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:44:31,636 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:44:31,637 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:44:33,366 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.3\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/ccp4.cpp -o build/temp.linux-armv7l-cpython-311/python/ccp4.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T17:45:20,702 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.3\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/chemcomp.cpp -o build/temp.linux-armv7l-cpython-311/python/chemcomp.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T17:46:06,159 In file included from /usr/include/c++/12/vector:70, 2023-09-16T17:46:06,159 from include/gemmi/chemcomp.hpp:10, 2023-09-16T17:46:06,160 from python/chemcomp.cpp:3: 2023-09-16T17:46:06,160 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator, iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’: 2023-09-16T17:46:06,161 /usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:46:06,162 189 | vector<_Tp, _Alloc>:: 2023-09-16T17:46:06,163 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:06,163 /usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:46:06,558 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator, iterator) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’: 2023-09-16T17:46:06,558 /usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:46:06,559 /usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:46:06,994 In file included from /usr/include/c++/12/string:50, 2023-09-16T17:46:06,994 from include/gemmi/chemcomp.hpp:9: 2023-09-16T17:46:06,995 /usr/include/c++/12/bits/stl_algobase.h: In function ‘_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >(const std::__cxx11::basic_string&, const std::__cxx11::basic_string&):: >]’: 2023-09-16T17:46:06,996 /usr/include/c++/12/bits/stl_algobase.h:2059:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:06,997 2059 | __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last, 2023-09-16T17:46:06,997 | ^~~~~~~~~ 2023-09-16T17:46:06,998 /usr/include/c++/12/bits/stl_algobase.h:2059:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:07,387 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator, iterator) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’: 2023-09-16T17:46:07,388 /usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:46:07,388 189 | vector<_Tp, _Alloc>:: 2023-09-16T17:46:07,389 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:07,389 /usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:46:08,840 In file included from /usr/include/c++/12/vector:64: 2023-09-16T17:46:08,840 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-16T17:46:08,841 inlined from ‘void gemmi::vector_remove_if(std::vector&, F&&) [with T = Restraints::Bond; F = ChemComp::remove_nonmatching_restraints()::]’ at include/gemmi/util.hpp:245:10, 2023-09-16T17:46:08,841 inlined from ‘void gemmi::ChemComp::remove_nonmatching_restraints()’ at include/gemmi/chemcomp.hpp:350:21: 2023-09-16T17:46:08,842 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:08,843 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-16T17:46:08,844 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:08,844 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-16T17:46:08,845 inlined from ‘void gemmi::vector_remove_if(std::vector&, F&&) [with T = Restraints::Angle; F = ChemComp::remove_nonmatching_restraints()::]’ at include/gemmi/util.hpp:245:10, 2023-09-16T17:46:08,845 inlined from ‘void gemmi::ChemComp::remove_nonmatching_restraints()’ at include/gemmi/chemcomp.hpp:354:21: 2023-09-16T17:46:08,846 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:08,847 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-16T17:46:08,848 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:08,848 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-16T17:46:08,850 inlined from ‘void gemmi::vector_remove_if(std::vector&, F&&) [with T = Restraints::Torsion; F = ChemComp::remove_nonmatching_restraints()::]’ at include/gemmi/util.hpp:245:10, 2023-09-16T17:46:08,850 inlined from ‘void gemmi::ChemComp::remove_nonmatching_restraints()’ at include/gemmi/chemcomp.hpp:359:21: 2023-09-16T17:46:08,851 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:08,851 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-16T17:46:08,852 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:12,691 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Restraints::Angle&}; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’: 2023-09-16T17:46:12,692 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:46:12,693 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:46:12,693 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:13,371 /usr/include/c++/12/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’: 2023-09-16T17:46:13,372 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:46:13,372 739 | vector<_Tp, _Alloc>:: 2023-09-16T17:46:13,373 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:13,374 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:13,375 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:14,623 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Plane}; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’: 2023-09-16T17:46:14,624 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:46:14,625 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:46:14,626 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:14,681 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Plane}; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’: 2023-09-16T17:46:14,682 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:14,682 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T17:46:14,684 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:14,891 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Bond}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’: 2023-09-16T17:46:14,892 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:46:14,892 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:46:14,893 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:15,054 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::make_chemcomp_with_restraints(const Residue&)::Pair}; _Tp = gemmi::make_chemcomp_with_restraints(const Residue&)::Pair; _Alloc = std::allocator]’: 2023-09-16T17:46:15,055 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:46:15,250 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’: 2023-09-16T17:46:15,250 /usr/include/c++/12/bits/vector.tcc:133:5: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-16T17:46:15,251 133 | vector<_Tp, _Alloc>:: 2023-09-16T17:46:15,252 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:15,252 /usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:15,253 164 | _M_realloc_insert(begin() + (__position - cbegin()), __x); 2023-09-16T17:46:15,254 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:20,976 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Restraints::Bond&}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’: 2023-09-16T17:46:20,976 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:46:20,977 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:46:20,978 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:21,105 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’: 2023-09-16T17:46:21,106 /usr/include/c++/12/bits/vector.tcc:133:5: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-16T17:46:21,106 133 | vector<_Tp, _Alloc>:: 2023-09-16T17:46:21,107 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:21,108 /usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:21,108 164 | _M_realloc_insert(begin() + (__position - cbegin()), __x); 2023-09-16T17:46:21,109 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:21,346 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::make_chemcomp_with_restraints(const Residue&)::Pair}; _Tp = gemmi::make_chemcomp_with_restraints(const Residue&)::Pair; _Alloc = std::allocator]’, 2023-09-16T17:46:21,347 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::make_chemcomp_with_restraints(const Residue&)::Pair; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-16T17:46:21,348 inlined from ‘gemmi::ChemComp gemmi::make_chemcomp_with_restraints(const Residue&)’ at include/gemmi/to_chemcomp.hpp:88:24: 2023-09-16T17:46:21,349 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:21,349 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T17:46:21,350 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:21,351 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-16T17:46:21,351 inlined from ‘gemmi::ChemComp gemmi::make_chemcomp_with_restraints(const Residue&)’ at include/gemmi/to_chemcomp.hpp:101:26: 2023-09-16T17:46:21,352 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:21,352 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:46:21,353 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:46:21,354 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-16T17:46:21,355 inlined from ‘gemmi::ChemComp gemmi::make_chemcomp_with_restraints(const Residue&)’ at include/gemmi/to_chemcomp.hpp:129:27: 2023-09-16T17:46:21,356 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:21,356 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:46:21,357 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:46:21,883 /usr/include/c++/12/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’: 2023-09-16T17:46:21,883 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:46:21,884 739 | vector<_Tp, _Alloc>:: 2023-09-16T17:46:21,885 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:21,885 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:21,886 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:22,579 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Bond}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-16T17:46:22,580 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-16T17:46:22,581 inlined from ‘gemmi::ChemComp gemmi::make_chemcomp_from_block(const cif::Block&)’ at include/gemmi/chemcomp.hpp:487:26: 2023-09-16T17:46:22,582 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:22,582 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T17:46:22,583 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:32,452 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’: 2023-09-16T17:46:32,453 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:46:32,453 175 | vector<_Tp, _Alloc>:: 2023-09-16T17:46:32,454 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:32,558 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’: 2023-09-16T17:46:32,558 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:46:32,739 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Restraints::Torsion&}; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’: 2023-09-16T17:46:32,740 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:46:32,740 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:46:32,741 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:32,952 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’: 2023-09-16T17:46:32,952 /usr/include/c++/12/bits/vector.tcc:133:5: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-16T17:46:32,953 133 | vector<_Tp, _Alloc>:: 2023-09-16T17:46:32,954 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:32,955 /usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:32,955 164 | _M_realloc_insert(begin() + (__position - cbegin()), __x); 2023-09-16T17:46:32,956 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:33,257 /usr/include/c++/12/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’: 2023-09-16T17:46:33,257 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:46:33,258 739 | vector<_Tp, _Alloc>:: 2023-09-16T17:46:33,259 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:33,260 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:33,260 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:33,451 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’: 2023-09-16T17:46:33,452 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:46:33,452 175 | vector<_Tp, _Alloc>:: 2023-09-16T17:46:33,453 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:34,249 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’: 2023-09-16T17:46:34,250 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:46:42,660 In file included from python/common.h:3, 2023-09-16T17:46:42,660 from python/chemcomp.cpp:7: 2023-09-16T17:46:42,661 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access<__gnu_cxx::__normal_iterator >, gemmi::Restraints::Bond&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Restraints::Bond&; Extra = {}]’: 2023-09-16T17:46:42,662 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:42,662 2372 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) { 2023-09-16T17:46:42,663 | ^~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:42,664 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:42,788 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access<__gnu_cxx::__normal_iterator >, gemmi::Restraints::Angle&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Restraints::Angle&; Extra = {}]’: 2023-09-16T17:46:42,789 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:42,789 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:42,914 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access<__gnu_cxx::__normal_iterator >, gemmi::Restraints::Torsion&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Restraints::Torsion&; Extra = {}]’: 2023-09-16T17:46:42,915 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:42,915 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:43,164 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access<__gnu_cxx::__normal_iterator >, gemmi::Restraints::Plane&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Restraints::Plane&; Extra = {}]’: 2023-09-16T17:46:43,165 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:43,166 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:44,520 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’, 2023-09-16T17:46:44,520 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-16T17:46:44,521 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:44,522 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:44,523 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:46:44,524 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:44,524 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:44,525 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:46:44,526 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:44,526 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’, 2023-09-16T17:46:44,527 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-16T17:46:44,528 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:44,528 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:44,529 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:46:44,530 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:44,531 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:44,531 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:46:44,532 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:45,143 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-16T17:46:45,144 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-16T17:46:45,145 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:45,146 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:45,146 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:46:45,147 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:45,148 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:45,149 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:46:45,150 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:45,150 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-16T17:46:45,151 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-16T17:46:45,152 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:45,153 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:45,153 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:46:45,154 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:45,155 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:45,155 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:46:45,156 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:45,383 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-16T17:46:45,384 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-16T17:46:45,385 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:45,386 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-16T17:46:45,386 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:46:45,387 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:45,388 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:45,388 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:46:45,389 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:46:45,390 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-16T17:46:45,390 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-16T17:46:45,391 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:45,391 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-16T17:46:45,392 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:46:45,393 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:45,394 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:45,395 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:46:45,395 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:46:45,475 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-16T17:46:45,475 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-16T17:46:45,476 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-16T17:46:45,476 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:45,477 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:45,478 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:46:45,479 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:45,480 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:46:45,480 1779 | _M_range_insert(__pos, __first, __last, 2023-09-16T17:46:45,481 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:45,482 1780 | std::__iterator_category(__first)); 2023-09-16T17:46:45,482 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:45,483 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:45,484 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-16T17:46:45,484 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-16T17:46:45,485 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-16T17:46:45,486 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:45,486 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:45,487 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:46:45,488 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:45,489 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:46:45,490 1779 | _M_range_insert(__pos, __first, __last, 2023-09-16T17:46:45,490 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:45,491 1780 | std::__iterator_category(__first)); 2023-09-16T17:46:45,492 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:45,492 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:45,586 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-16T17:46:45,587 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-16T17:46:45,588 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Restraints::Torsion&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:45,589 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Restraints::Torsion&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:45,589 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Torsion&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Torsion&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:46:45,590 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Torsion&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Torsion&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:45,591 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:45,591 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:46:45,592 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:46:45,593 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-16T17:46:45,593 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-16T17:46:45,594 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Restraints::Torsion&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:45,595 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Restraints::Torsion&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:45,595 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Torsion&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Torsion&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:46:45,596 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Torsion&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Torsion&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:45,597 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:45,598 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:46:45,598 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:46:45,655 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-16T17:46:45,656 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-16T17:46:45,657 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:45,657 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:45,658 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:46:45,658 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:45,659 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:45,660 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:46:45,660 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:45,661 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-16T17:46:45,662 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-16T17:46:45,663 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:45,663 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:45,664 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:46:45,664 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:45,666 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:45,666 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:46:45,667 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:45,887 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-16T17:46:45,888 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-16T17:46:45,889 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:45,889 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-16T17:46:45,890 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:46:45,891 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:45,891 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:45,892 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:46:45,893 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:46:45,894 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-16T17:46:45,894 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-16T17:46:45,895 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:45,896 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-16T17:46:45,896 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:46:45,897 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:45,898 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:45,899 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:46:45,899 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:46:45,990 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-16T17:46:45,990 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-16T17:46:45,991 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-16T17:46:45,991 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:45,992 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:45,993 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:46:45,994 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:45,994 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:46:45,995 1779 | _M_range_insert(__pos, __first, __last, 2023-09-16T17:46:45,996 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:45,996 1780 | std::__iterator_category(__first)); 2023-09-16T17:46:45,997 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:45,997 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:45,998 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-16T17:46:45,998 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-16T17:46:45,999 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-16T17:46:46,000 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:46,000 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:46,001 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:46:46,002 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:46,003 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:46:46,004 1779 | _M_range_insert(__pos, __first, __last, 2023-09-16T17:46:46,004 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:46,005 1780 | std::__iterator_category(__first)); 2023-09-16T17:46:46,006 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:46,006 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:46,089 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-16T17:46:46,090 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-16T17:46:46,091 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Restraints::Angle&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:46,091 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Restraints::Angle&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:46,092 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Angle&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Angle&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:46:46,093 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Angle&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Angle&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:46,094 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:46,094 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:46:46,095 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:46:46,096 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-16T17:46:46,097 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-16T17:46:46,097 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Restraints::Angle&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:46,098 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Restraints::Angle&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:46,099 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Angle&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Angle&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:46:46,100 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Angle&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Angle&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:46,101 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:46,101 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:46:46,102 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:46:46,152 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-16T17:46:46,152 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-16T17:46:46,153 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:46,154 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:46,155 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:46:46,155 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:46,156 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:46,157 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:46:46,158 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:46,159 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-16T17:46:46,159 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-16T17:46:46,160 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:46,161 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:46,162 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:46:46,162 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:46,163 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:46,164 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:46:46,164 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:46,388 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-16T17:46:46,389 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-16T17:46:46,389 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:46,390 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-16T17:46:46,391 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:46:46,392 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:46,392 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:46,393 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:46:46,394 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:46:46,395 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-16T17:46:46,395 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-16T17:46:46,396 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:46,397 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-16T17:46:46,398 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:46:46,398 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:46,399 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:46,400 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:46:46,401 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:46:46,486 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-16T17:46:46,487 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-16T17:46:46,488 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-16T17:46:46,488 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:46,489 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:46,490 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:46:46,490 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:46,491 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:46:46,492 1779 | _M_range_insert(__pos, __first, __last, 2023-09-16T17:46:46,493 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:46,493 1780 | std::__iterator_category(__first)); 2023-09-16T17:46:46,494 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:46,494 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:46,495 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-16T17:46:46,496 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-16T17:46:46,496 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-16T17:46:46,497 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:46,497 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:46,498 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:46:46,499 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:46,500 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:46:46,501 1779 | _M_range_insert(__pos, __first, __last, 2023-09-16T17:46:46,501 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:46,502 1780 | std::__iterator_category(__first)); 2023-09-16T17:46:46,502 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:46,503 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:46,591 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-16T17:46:46,592 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-16T17:46:46,593 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Restraints::Bond&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:46,593 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Restraints::Bond&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:46,594 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Bond&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Bond&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:46:46,595 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Bond&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Bond&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:46,595 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:46,596 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:46:46,597 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:46:46,597 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-16T17:46:46,598 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-16T17:46:46,598 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Restraints::Bond&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:46,599 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Restraints::Bond&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:46,600 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Bond&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Bond&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:46:46,600 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Bond&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Bond&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:46,601 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:46,602 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:46:46,602 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:46:47,989 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-16T17:46:47,990 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::iterable&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:180:24: 2023-09-16T17:46:47,991 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:47,991 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-16T17:46:47,992 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:48,490 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-16T17:46:48,492 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::iterable&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:180:24: 2023-09-16T17:46:48,493 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:48,494 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-16T17:46:48,494 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:49,009 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Bond}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-16T17:46:49,010 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-16T17:46:49,010 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::iterable&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:177:32: 2023-09-16T17:46:49,011 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:49,012 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T17:46:49,012 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:49,013 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-16T17:46:49,013 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::iterable&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:180:24: 2023-09-16T17:46:49,014 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:49,015 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-16T17:46:49,015 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:49,270 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Bond}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-16T17:46:49,271 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-16T17:46:49,271 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:156:25, 2023-09-16T17:46:49,272 inlined from ‘pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/init.h:303:33, 2023-09-16T17:46:49,273 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {pybind11::detail::value_and_holder&, const pybind11::iterable&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:49,274 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&; Args = {pybind11::detail::value_and_holder&, const pybind11::iterable&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:49,275 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::, void, pybind11::detail::value_and_holder&, const pybind11::iterable&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor>(pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&&, void (*)(pybind11::detail::value_and_holder&, const pybind11::iterable&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::detail::is_new_style_constructor&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:46:49,275 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::, void, pybind11::detail::value_and_holder&, const pybind11::iterable&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor>(pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&&, void (*)(pybind11::detail::value_and_holder&, const pybind11::iterable&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::detail::is_new_style_constructor&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:49,276 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:49,277 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T17:46:49,277 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:49,278 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Bond}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-16T17:46:49,278 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-16T17:46:49,279 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:156:25, 2023-09-16T17:46:49,280 inlined from ‘pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/init.h:303:33, 2023-09-16T17:46:49,280 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {pybind11::detail::value_and_holder&, const pybind11::iterable&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:49,281 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&; Args = {pybind11::detail::value_and_holder&, const pybind11::iterable&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:49,282 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::, void, pybind11::detail::value_and_holder&, const pybind11::iterable&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor>(pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&&, void (*)(pybind11::detail::value_and_holder&, const pybind11::iterable&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::detail::is_new_style_constructor&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:46:49,283 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::, void, pybind11::detail::value_and_holder&, const pybind11::iterable&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor>(pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&&, void (*)(pybind11::detail::value_and_holder&, const pybind11::iterable&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::detail::is_new_style_constructor&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:49,284 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:49,285 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T17:46:49,285 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:49,805 In function ‘_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >(const std::__cxx11::basic_string&, const std::__cxx11::basic_string&):: >]’, 2023-09-16T17:46:49,806 inlined from ‘_IIter std::find_if(_IIter, _IIter, _Predicate) [with _IIter = __gnu_cxx::__normal_iterator >; _Predicate = gemmi::Restraints::find_bond >(const std::__cxx11::basic_string&, const std::__cxx11::basic_string&)::]’ at /usr/include/c++/12/bits/stl_algo.h:3877:28, 2023-09-16T17:46:49,807 inlined from ‘std::vector::iterator gemmi::Restraints::find_bond(const T&, const T&) [with T = std::__cxx11::basic_string]’ at include/gemmi/chemcomp.hpp:143:24, 2023-09-16T17:46:49,807 inlined from ‘add_chemcomp(pybind11::module&)::’ at python/chemcomp.cpp:138:37, 2023-09-16T17:46:49,808 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Restraints::Bond&; Func = add_chemcomp(pybind11::module&)::&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {gemmi::Restraints&, const std::__cxx11::basic_string, std::allocator >&, const std::__cxx11::basic_string, std::allocator >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:49,809 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Restraints::Bond&; Guard = pybind11::detail::void_type; Func = add_chemcomp(pybind11::module&)::&; Args = {gemmi::Restraints&, const std::__cxx11::basic_string, std::allocator >&, const std::__cxx11::basic_string, std::allocator >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-16T17:46:49,809 inlined from ‘pybind11::cpp_function::initialize, gemmi::Restraints::Bond&, gemmi::Restraints&, const std::__cxx11::basic_string, std::allocator >&, const std::__cxx11::basic_string, std::allocator >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::return_value_policy>(add_chemcomp(pybind11::module&)::&&, gemmi::Restraints::Bond& (*)(gemmi::Restraints&, const std::__cxx11::basic_string&, const std::__cxx11::basic_string&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::return_value_policy&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:46:49,810 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, gemmi::Restraints::Bond&, gemmi::Restraints&, const std::__cxx11::basic_string, std::allocator >&, const std::__cxx11::basic_string, std::allocator >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::return_value_policy>(add_chemcomp(pybind11::module&)::&&, gemmi::Restraints::Bond& (*)(gemmi::Restraints&, const std::__cxx11::basic_string&, const std::__cxx11::basic_string&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::return_value_policy&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:49,811 /usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:49,811 2112 | return __find_if(__first, __last, __pred, 2023-09-16T17:46:49,812 | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:49,813 2113 | std::__iterator_category(__first)); 2023-09-16T17:46:49,813 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:49,815 In function ‘_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >(const std::__cxx11::basic_string&, const std::__cxx11::basic_string&):: >]’, 2023-09-16T17:46:49,815 inlined from ‘_IIter std::find_if(_IIter, _IIter, _Predicate) [with _IIter = __gnu_cxx::__normal_iterator >; _Predicate = gemmi::Restraints::find_bond >(const std::__cxx11::basic_string&, const std::__cxx11::basic_string&)::]’ at /usr/include/c++/12/bits/stl_algo.h:3877:28, 2023-09-16T17:46:49,816 inlined from ‘std::vector::iterator gemmi::Restraints::find_bond(const T&, const T&) [with T = std::__cxx11::basic_string]’ at include/gemmi/chemcomp.hpp:143:24, 2023-09-16T17:46:49,816 inlined from ‘add_chemcomp(pybind11::module&)::’ at python/chemcomp.cpp:138:37, 2023-09-16T17:46:49,817 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Restraints::Bond&; Func = add_chemcomp(pybind11::module&)::&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {gemmi::Restraints&, const std::__cxx11::basic_string, std::allocator >&, const std::__cxx11::basic_string, std::allocator >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:49,817 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Restraints::Bond&; Guard = pybind11::detail::void_type; Func = add_chemcomp(pybind11::module&)::&; Args = {gemmi::Restraints&, const std::__cxx11::basic_string, std::allocator >&, const std::__cxx11::basic_string, std::allocator >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-16T17:46:49,818 inlined from ‘pybind11::cpp_function::initialize, gemmi::Restraints::Bond&, gemmi::Restraints&, const std::__cxx11::basic_string, std::allocator >&, const std::__cxx11::basic_string, std::allocator >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::return_value_policy>(add_chemcomp(pybind11::module&)::&&, gemmi::Restraints::Bond& (*)(gemmi::Restraints&, const std::__cxx11::basic_string&, const std::__cxx11::basic_string&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::return_value_policy&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:46:49,819 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, gemmi::Restraints::Bond&, gemmi::Restraints&, const std::__cxx11::basic_string, std::allocator >&, const std::__cxx11::basic_string, std::allocator >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::return_value_policy>(add_chemcomp(pybind11::module&)::&&, gemmi::Restraints::Bond& (*)(gemmi::Restraints&, const std::__cxx11::basic_string&, const std::__cxx11::basic_string&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::return_value_policy&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:49,819 /usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:49,820 2112 | return __find_if(__first, __last, __pred, 2023-09-16T17:46:49,821 | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:49,821 2113 | std::__iterator_category(__first)); 2023-09-16T17:46:49,822 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:51,979 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Restraints::Torsion&; Extra = {}]’, 2023-09-16T17:46:51,989 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-16T17:46:51,990 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:46:51,991 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:46:51,992 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-16T17:46:51,992 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:51,993 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:51,994 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-16T17:46:51,994 | ^ 2023-09-16T17:46:51,995 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Restraints::Torsion&; Extra = {}]’, 2023-09-16T17:46:51,995 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-16T17:46:51,996 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:46:51,997 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:46:51,998 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-16T17:46:51,999 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:51,999 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:52,000 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-16T17:46:52,001 | ^ 2023-09-16T17:46:52,019 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Restraints::Bond&; Extra = {}]’, 2023-09-16T17:46:52,020 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-16T17:46:52,021 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:46:52,022 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:46:52,023 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-16T17:46:52,023 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:52,024 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:52,025 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-16T17:46:52,026 | ^ 2023-09-16T17:46:52,026 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Restraints::Bond&; Extra = {}]’, 2023-09-16T17:46:52,027 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-16T17:46:52,028 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:46:52,028 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:46:52,029 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-16T17:46:52,030 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:52,031 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:52,032 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-16T17:46:52,032 | ^ 2023-09-16T17:46:52,045 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Restraints::Plane&; Extra = {}]’, 2023-09-16T17:46:52,046 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-16T17:46:52,047 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:46:52,048 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:46:52,051 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-16T17:46:52,052 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:52,054 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:52,055 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-16T17:46:52,056 | ^ 2023-09-16T17:46:52,057 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Restraints::Plane&; Extra = {}]’, 2023-09-16T17:46:52,057 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-16T17:46:52,058 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:46:52,059 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:46:52,060 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-16T17:46:52,061 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:52,062 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:52,062 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-16T17:46:52,063 | ^ 2023-09-16T17:46:52,078 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Restraints::Angle&; Extra = {}]’, 2023-09-16T17:46:52,079 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-16T17:46:52,080 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:46:52,081 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:46:52,082 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-16T17:46:52,082 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:52,083 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:52,084 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-16T17:46:52,085 | ^ 2023-09-16T17:46:52,085 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Restraints::Angle&; Extra = {}]’, 2023-09-16T17:46:52,086 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-16T17:46:52,087 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:46:52,088 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:46:52,089 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-16T17:46:52,089 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:52,090 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:52,091 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-16T17:46:52,091 | ^ 2023-09-16T17:46:53,448 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’, 2023-09-16T17:46:53,449 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-16T17:46:53,450 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Restraints::Plane; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:46:53,450 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Restraints::Plane; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:46:53,451 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Plane, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Plane (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-16T17:46:53,452 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Plane, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Plane (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:53,453 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:53,453 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:46:53,454 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:53,455 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’, 2023-09-16T17:46:53,455 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-16T17:46:53,456 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Restraints::Plane; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:46:53,457 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Restraints::Plane; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:46:53,458 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Plane, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Plane (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-16T17:46:53,458 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Plane, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Plane (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:53,459 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:53,460 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:46:53,461 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:53,724 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-16T17:46:53,725 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-16T17:46:53,725 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Restraints::Torsion; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:46:53,726 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Restraints::Torsion; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:46:53,727 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Torsion, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Torsion (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17: 2023-09-16T17:46:53,728 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:53,728 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:46:53,729 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:53,730 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-16T17:46:53,730 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-16T17:46:53,731 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Restraints::Torsion; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:46:53,731 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Restraints::Torsion; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:46:53,732 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Torsion, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Torsion (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40: 2023-09-16T17:46:53,733 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:53,733 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:46:53,734 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:53,913 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-16T17:46:53,913 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-16T17:46:53,914 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Restraints::Angle; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:46:53,915 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Restraints::Angle; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:46:53,916 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Angle, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Angle (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-16T17:46:53,916 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Angle, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Angle (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:53,917 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:53,918 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:46:53,918 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:53,919 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-16T17:46:53,920 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-16T17:46:53,921 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Restraints::Angle; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:46:53,921 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Restraints::Angle; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:46:53,922 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Angle, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Angle (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-16T17:46:53,923 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Angle, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Angle (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:53,924 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:53,924 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:46:53,925 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:54,089 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-16T17:46:54,090 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-16T17:46:54,091 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Restraints::Bond; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:46:54,091 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Restraints::Bond; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:46:54,092 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Bond, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Bond (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-16T17:46:54,093 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Bond, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Bond (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:54,093 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:54,094 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:46:54,095 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:54,095 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-16T17:46:54,096 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-16T17:46:54,097 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Restraints::Bond; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:46:54,097 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Restraints::Bond; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:46:54,098 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Bond, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Bond (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-16T17:46:54,099 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Bond, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Bond (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:54,100 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:54,100 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:46:54,101 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:54,485 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’, 2023-09-16T17:46:54,576 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-16T17:46:54,716 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:54,823 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:54,839 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:46:54,954 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:54,962 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:55,167 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:46:55,271 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:55,347 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’, 2023-09-16T17:46:55,387 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-16T17:46:55,457 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:55,692 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:55,693 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:46:55,695 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:55,696 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:55,697 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:46:55,698 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:55,699 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-16T17:46:55,700 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-16T17:46:55,701 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:55,702 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:55,703 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:46:55,705 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:55,706 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:55,707 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:46:55,708 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:55,709 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-16T17:46:55,710 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-16T17:46:55,711 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:55,712 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:55,713 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:46:55,714 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:55,716 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:55,717 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:46:55,718 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:55,719 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-16T17:46:55,720 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-16T17:46:55,721 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:55,722 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:55,723 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:46:55,724 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:55,725 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:55,727 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:46:55,728 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:55,729 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-16T17:46:55,730 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-16T17:46:55,731 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:55,732 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:55,733 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:46:55,734 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:55,736 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:55,737 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:46:55,738 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:55,739 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-16T17:46:55,740 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-16T17:46:55,741 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:55,742 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:55,743 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:46:55,744 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:55,745 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:55,746 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:46:55,747 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:55,748 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-16T17:46:55,749 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-16T17:46:55,750 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:55,751 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:55,751 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:46:55,752 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:55,753 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:46:55,753 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:46:55,754 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:55,755 In file included from python/chemcomp.cpp:9: 2023-09-16T17:46:55,755 In lambda function, 2023-09-16T17:46:55,756 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Restraints::Torsion&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:55,757 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Restraints::Torsion&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:55,758 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Torsion&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Torsion&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:46:55,759 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Torsion&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Torsion&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:55,760 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-16T17:46:55,761 203 | v.insert(v.begin() + i, x); 2023-09-16T17:46:55,761 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:55,762 In lambda function, 2023-09-16T17:46:55,763 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Restraints::Torsion&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:55,764 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Restraints::Torsion&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:55,765 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Torsion&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Torsion&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:46:55,765 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Torsion&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Torsion&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:55,766 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-16T17:46:55,767 203 | v.insert(v.begin() + i, x); 2023-09-16T17:46:55,768 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:55,929 In lambda function, 2023-09-16T17:46:55,930 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Restraints::Bond&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:55,931 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Restraints::Bond&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:55,931 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Bond&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Bond&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:46:55,932 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Bond&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Bond&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:55,933 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-16T17:46:55,934 203 | v.insert(v.begin() + i, x); 2023-09-16T17:46:55,934 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:55,935 In lambda function, 2023-09-16T17:46:55,935 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Restraints::Bond&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:55,936 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Restraints::Bond&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:55,937 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Bond&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Bond&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:46:55,937 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Bond&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Bond&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:55,939 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-16T17:46:55,939 203 | v.insert(v.begin() + i, x); 2023-09-16T17:46:55,940 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:56,018 In lambda function, 2023-09-16T17:46:56,019 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Restraints::Angle&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:56,019 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Restraints::Angle&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:56,020 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Angle&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Angle&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:46:56,020 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Angle&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Angle&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:56,021 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-16T17:46:56,022 203 | v.insert(v.begin() + i, x); 2023-09-16T17:46:56,023 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-16T17:46:56,023 In lambda function, 2023-09-16T17:46:56,024 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Restraints::Angle&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:46:56,024 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Restraints::Angle&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:46:56,025 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Angle&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Angle&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:46:56,026 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Angle&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Angle&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:46:56,027 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-16T17:46:56,028 203 | v.insert(v.begin() + i, x); 2023-09-16T17:46:56,028 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-16T17:47:00,916 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Plane}; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’, 2023-09-16T17:47:00,916 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-16T17:47:00,917 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::iterable&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:177:32: 2023-09-16T17:47:00,918 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:47:00,919 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T17:47:00,919 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:47:01,236 /usr/include/c++/12/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’: 2023-09-16T17:47:01,237 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:47:01,237 739 | vector<_Tp, _Alloc>:: 2023-09-16T17:47:01,238 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:47:01,239 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:47:01,239 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:47:01,380 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’, 2023-09-16T17:47:01,380 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-16T17:47:01,381 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-16T17:47:01,381 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:47:01,382 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:47:01,383 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:47:01,384 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:47:01,385 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:47:01,385 1779 | _M_range_insert(__pos, __first, __last, 2023-09-16T17:47:01,386 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:47:01,387 1780 | std::__iterator_category(__first)); 2023-09-16T17:47:01,387 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:47:01,388 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:47:01,389 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’, 2023-09-16T17:47:01,390 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-16T17:47:01,390 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-16T17:47:01,391 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:47:01,392 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:47:01,392 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:47:01,393 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:47:01,394 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:47:01,395 1779 | _M_range_insert(__pos, __first, __last, 2023-09-16T17:47:01,395 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:47:01,396 1780 | std::__iterator_category(__first)); 2023-09-16T17:47:01,397 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:47:01,397 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:47:01,854 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Restraints::Plane&}; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’: 2023-09-16T17:47:01,854 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:47:01,855 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:47:01,856 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:47:01,976 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’, 2023-09-16T17:47:01,977 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-16T17:47:01,977 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:47:01,978 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-16T17:47:01,978 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:47:01,979 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:47:01,980 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:47:01,981 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:47:01,981 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:47:01,982 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’, 2023-09-16T17:47:01,982 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-16T17:47:01,983 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:47:01,983 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-16T17:47:01,984 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:47:01,985 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:47:01,985 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:47:01,986 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:47:01,987 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:47:02,085 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’, 2023-09-16T17:47:02,086 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-16T17:47:02,086 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Restraints::Plane&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:47:02,087 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Restraints::Plane&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:47:02,088 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Plane&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Plane&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:47:02,088 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Plane&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Plane&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:47:02,089 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:47:02,090 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:47:02,090 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:47:02,091 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’, 2023-09-16T17:47:02,092 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-16T17:47:02,092 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Restraints::Plane&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:47:02,093 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Restraints::Plane&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:47:02,093 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Plane&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Plane&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:47:02,094 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Plane&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Plane&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:47:02,095 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:47:02,096 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:47:02,096 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:47:02,171 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’: 2023-09-16T17:47:02,171 /usr/include/c++/12/bits/vector.tcc:133:5: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-16T17:47:02,172 133 | vector<_Tp, _Alloc>:: 2023-09-16T17:47:02,172 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:47:02,173 /usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:47:02,173 164 | _M_realloc_insert(begin() + (__position - cbegin()), __x); 2023-09-16T17:47:02,174 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:47:02,259 In lambda function, 2023-09-16T17:47:02,260 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Restraints::Plane&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:47:02,260 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Restraints::Plane&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:47:02,261 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Plane&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Plane&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:47:02,262 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Plane&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Plane&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:47:02,262 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-16T17:47:02,263 203 | v.insert(v.begin() + i, x); 2023-09-16T17:47:02,264 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-16T17:47:02,264 In lambda function, 2023-09-16T17:47:02,265 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Restraints::Plane&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:47:02,265 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Restraints::Plane&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:47:02,266 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Plane&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Plane&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:47:02,266 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Plane&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Plane&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:47:02,267 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-16T17:47:02,268 203 | v.insert(v.begin() + i, x); 2023-09-16T17:47:02,268 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-16T17:47:03,213 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.3\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/cif.cpp -o build/temp.linux-armv7l-cpython-311/python/cif.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T17:48:04,903 In file included from /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../attr.h:14, 2023-09-16T17:48:05,036 from /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/class.h:12, 2023-09-16T17:48:05,131 from /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:13, 2023-09-16T17:48:05,221 from python/common.h:3, 2023-09-16T17:48:05,250 from python/cif.cpp:9: 2023-09-16T17:48:05,336 In static member function ‘static pybind11::handle pybind11::detail::array_caster::cast(T_*, pybind11::return_value_policy, pybind11::handle) [with T_ = std::array, 2>; typename std::enable_if::type>::value, int>::type = 0; ArrayType = std::array, 2>; Value = std::__cxx11::basic_string; bool Resizable = false; unsigned int Size = 2]’, 2023-09-16T17:48:05,354 inlined from ‘pybind11::cpp_function::initialize&, std::array, 2>*, gemmi::cif::Item&>(const add_cif(pybind11::module&)::&, std::array, 2>* (*)(gemmi::cif::Item&))::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-16T17:48:05,465 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize&, std::array, 2>*, gemmi::cif::Item&>(const add_cif(pybind11::module&)::&, std::array, 2>* (*)(gemmi::cif::Item&))::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:48:05,465 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:102:13: warning: ‘void operator delete(void*, std::size_t)’ called on pointer ‘’ with nonzero offset 8 [-Wfree-nonheap-object] 2023-09-16T17:48:05,467 102 | delete src; \ 2023-09-16T17:48:05,468 | ^~~~~~~~~~ 2023-09-16T17:48:05,469 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl.h:275:5: note: in expansion of macro ‘PYBIND11_TYPE_CASTER’ 2023-09-16T17:48:05,469 275 | PYBIND11_TYPE_CASTER(ArrayType, 2023-09-16T17:48:05,471 | ^~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:48:05,472 In function ‘typename pybind11::detail::make_caster::cast_op_type::type> pybind11::detail::cast_op(make_caster&&) [with T = gemmi::cif::Item&]’, 2023-09-16T17:48:05,473 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::array, 2>*; Func = const add_cif(pybind11::module&)::&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {gemmi::cif::Item&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:51, 2023-09-16T17:48:05,474 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::array, 2>*; Guard = pybind11::detail::void_type; Func = const add_cif(pybind11::module&)::&; Args = {gemmi::cif::Item&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-16T17:48:05,479 inlined from ‘pybind11::cpp_function::initialize&, std::array, 2>*, gemmi::cif::Item&>(const add_cif(pybind11::module&)::&, std::array, 2>* (*)(gemmi::cif::Item&))::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-16T17:48:05,480 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize&, std::array, 2>*, gemmi::cif::Item&>(const add_cif(pybind11::module&)::&, std::array, 2>* (*)(gemmi::cif::Item&))::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:48:05,481 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:51:75: note: returned from ‘pybind11::detail::type_caster_base::operator itype&() [with type = gemmi::cif::Item]’ 2023-09-16T17:48:05,481 50 | return std::move(caster).operator typename make_caster:: 2023-09-16T17:48:05,482 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:48:05,483 51 | template cast_op_type::type>(); 2023-09-16T17:48:05,484 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ 2023-09-16T17:48:12,370 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.3\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/custom.cpp -o build/temp.linux-armv7l-cpython-311/python/custom.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T17:48:18,962 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.3\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/elem.cpp -o build/temp.linux-armv7l-cpython-311/python/elem.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T17:49:00,341 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.3\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/gemmi.cpp -o build/temp.linux-armv7l-cpython-311/python/gemmi.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T17:49:31,208 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.3\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/grid.cpp -o build/temp.linux-armv7l-cpython-311/python/grid.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T17:50:14,961 In file included from /usr/include/c++/12/vector:70, 2023-09-16T17:50:14,961 from include/gemmi/grid.hpp:15, 2023-09-16T17:50:14,962 from python/grid.cpp:13: 2023-09-16T17:50:14,963 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Blob&}; _Tp = gemmi::Blob; _Alloc = std::allocator]’: 2023-09-16T17:50:14,963 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:50:14,964 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:50:14,964 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:50:23,369 In file included from /usr/include/c++/12/vector:64: 2023-09-16T17:50:23,369 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Blob; _Alloc = std::allocator]’, 2023-09-16T17:50:23,370 inlined from ‘std::vector gemmi::find_blobs_by_flood_fill(const Grid&, const BlobCriteria&, bool)’ at include/gemmi/blob.hpp:127:26: 2023-09-16T17:50:23,370 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:50:23,371 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:50:23,372 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:50:52,862 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Fractional&}; _Tp = gemmi::Fractional; _Alloc = std::allocator]’: 2023-09-16T17:50:52,863 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:50:52,864 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:50:52,865 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:50:52,926 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Fractional; _Alloc = std::allocator]’, 2023-09-16T17:50:52,927 inlined from ‘bool pybind11::detail::list_caster::load(pybind11::handle, bool) [with Type = std::vector; Value = gemmi::Fractional]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl.h:180:28: 2023-09-16T17:50:52,928 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:50:52,928 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:50:52,929 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:50:53,820 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.3\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/hkl.cpp -o build/temp.linux-armv7l-cpython-311/python/hkl.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T17:51:02,590 python/hkl.cpp: In lambda function: 2023-09-16T17:51:02,590 python/hkl.cpp:143:18: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 2023-09-16T17:51:02,591 143 | return r; 2023-09-16T17:51:02,592 | ^ 2023-09-16T17:51:33,794 In file included from /usr/include/c++/12/bits/stl_algo.h:60, 2023-09-16T17:51:33,795 from /usr/include/c++/12/algorithm:61, 2023-09-16T17:51:33,795 from include/gemmi/math.hpp:10, 2023-09-16T17:51:33,796 from include/gemmi/unitcell.hpp:11, 2023-09-16T17:51:33,796 from python/hkl.cpp:3: 2023-09-16T17:51:33,797 /usr/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2023-09-16T17:51:33,797 /usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:51:33,798 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, 2023-09-16T17:51:33,798 | ^~~~~~~~~~~~~ 2023-09-16T17:51:34,378 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2023-09-16T17:51:34,378 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:51:34,379 1802 | __insertion_sort(_RandomAccessIterator __first, 2023-09-16T17:51:34,379 | ^~~~~~~~~~~~~~~~ 2023-09-16T17:51:34,380 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:51:34,430 In file included from /usr/include/c++/12/vector:70, 2023-09-16T17:51:34,430 from include/gemmi/unitcell.hpp:10: 2023-09-16T17:51:34,431 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator, iterator) [with _Tp = gemmi::Intensities::Refl; _Alloc = std::allocator]’: 2023-09-16T17:51:34,432 /usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:51:34,433 189 | vector<_Tp, _Alloc>:: 2023-09-16T17:51:34,433 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:51:34,434 /usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:51:34,699 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2023-09-16T17:51:34,700 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:51:34,701 1908 | __introsort_loop(_RandomAccessIterator __first, 2023-09-16T17:51:34,702 | ^~~~~~~~~~~~~~~~ 2023-09-16T17:51:34,719 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:51:34,727 /usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:51:34,727 1922 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); 2023-09-16T17:51:34,729 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:51:35,346 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Val_less_iter]’: 2023-09-16T17:51:35,347 /usr/include/c++/12/bits/stl_algo.h:1782:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:51:35,348 1782 | __unguarded_linear_insert(_RandomAccessIterator __last, 2023-09-16T17:51:35,348 | ^~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:51:35,654 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2023-09-16T17:51:35,655 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:51:35,655 1802 | __insertion_sort(_RandomAccessIterator __first, 2023-09-16T17:51:35,656 | ^~~~~~~~~~~~~~~~ 2023-09-16T17:51:35,657 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:51:35,713 /usr/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = gemmi::Intensities::Refl; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2023-09-16T17:51:35,713 /usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:51:35,714 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, 2023-09-16T17:51:35,715 | ^~~~~~~~~~~~~ 2023-09-16T17:51:44,159 In file included from /usr/include/c++/12/vector:64: 2023-09-16T17:51:44,160 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Intensities::Refl; _Alloc = std::allocator]’, 2023-09-16T17:51:44,161 inlined from ‘void gemmi::vector_remove_if(std::vector&, F&&) [with T = Intensities::Refl; F = Intensities::remove_systematic_absences()::]’ at include/gemmi/util.hpp:245:10, 2023-09-16T17:51:44,162 inlined from ‘void gemmi::Intensities::remove_systematic_absences()’ at include/gemmi/merge.hpp:195:21: 2023-09-16T17:51:44,163 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:51:44,164 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-16T17:51:44,165 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:51:44,218 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Mat33, gemmi::Vec3}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-16T17:51:44,219 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:51:44,220 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:51:44,221 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:51:44,327 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Mat33, gemmi::Vec3}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-16T17:51:44,327 inlined from ‘void gemmi::UnitCell::set_cell_images_from_spacegroup(const gemmi::SpaceGroup*)’ at include/gemmi/unitcell.hpp:326:26: 2023-09-16T17:51:44,328 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:51:44,328 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T17:51:44,329 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:51:45,097 In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, 2023-09-16T17:51:45,098 inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/include/c++/12/bits/stl_algo.h:4820:18, 2023-09-16T17:51:45,099 inlined from ‘int gemmi::Binner::setup_from_1_d2(int, Method, std::vector&&, const gemmi::UnitCell*)’ at include/gemmi/binner.hpp:34:16: 2023-09-16T17:51:45,099 /usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:51:45,100 1937 | std::__introsort_loop(__first, __last, 2023-09-16T17:51:45,100 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 2023-09-16T17:51:45,101 1938 | std::__lg(__last - __first) * 2, 2023-09-16T17:51:45,102 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:51:45,103 1939 | __comp); 2023-09-16T17:51:45,103 | ~~~~~~~ 2023-09-16T17:51:45,104 In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, 2023-09-16T17:51:45,105 inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/12/bits/stl_algo.h:1940:31, 2023-09-16T17:51:45,106 inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/include/c++/12/bits/stl_algo.h:4820:18, 2023-09-16T17:51:45,106 inlined from ‘int gemmi::Binner::setup_from_1_d2(int, Method, std::vector&&, const gemmi::UnitCell*)’ at include/gemmi/binner.hpp:34:16: 2023-09-16T17:51:45,107 /usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:51:45,108 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); 2023-09-16T17:51:45,108 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:51:45,109 /usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:51:45,110 1854 | std::__insertion_sort(__first, __last, __comp); 2023-09-16T17:51:45,110 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:51:46,733 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Mtz::Dataset}; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’: 2023-09-16T17:51:46,734 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:51:46,734 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:51:46,735 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:51:46,904 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Mtz::Dataset}; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-16T17:51:46,905 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-16T17:51:46,906 inlined from ‘gemmi::Mtz::Dataset& gemmi::Mtz::add_dataset(const std::string&)’ at include/gemmi/mtz.hpp:919:23: 2023-09-16T17:51:46,906 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:51:46,907 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T17:51:46,907 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:51:47,325 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Intensities::Refl}; _Tp = gemmi::Intensities::Refl; _Alloc = std::allocator]’: 2023-09-16T17:51:47,327 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:51:47,330 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:51:47,333 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:51:47,352 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Intensities::Refl}; _Tp = gemmi::Intensities::Refl; _Alloc = std::allocator]’: 2023-09-16T17:51:47,354 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:51:47,357 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T17:51:47,359 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:52:05,264 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::cif::Block}; _Tp = gemmi::ReflnBlock; _Alloc = std::allocator]’: 2023-09-16T17:52:05,264 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:52:05,265 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:52:05,266 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:52:05,564 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::cif::Block}; _Tp = gemmi::ReflnBlock; _Alloc = std::allocator]’, 2023-09-16T17:52:05,564 inlined from ‘std::vector gemmi::as_refln_blocks(std::vector&&)’ at include/gemmi/refln.hpp:149:19: 2023-09-16T17:52:05,565 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:52:05,566 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T17:52:05,567 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:52:05,851 In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = gemmi::impl_fprim::Point*; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, 2023-09-16T17:52:05,852 inlined from ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = gemmi::impl_fprim::Point*; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/12/bits/stl_algo.h:1844:5, 2023-09-16T17:52:05,853 inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = gemmi::impl_fprim::Point*; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/12/bits/stl_algo.h:1940:31, 2023-09-16T17:52:05,853 inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = gemmi::impl_fprim::Point*; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/12/bits/stl_algo.h:1932:5, 2023-09-16T17:52:05,854 inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = gemmi::impl_fprim::Point*]’ at /usr/include/c++/12/bits/stl_algo.h:4820:18, 2023-09-16T17:52:05,854 inlined from ‘void gemmi::impl_fprim::cromer(int, double, int, const OrbitalCoef*, double*, double*)’ at include/gemmi/fprime.hpp:161:14: 2023-09-16T17:52:05,855 /usr/include/c++/12/bits/stl_algo.h:1849:32: warning: array subscript 16 is outside array bounds of ‘gemmi::impl_fprim::Point [11]’ [-Warray-bounds] 2023-09-16T17:52:05,856 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); 2023-09-16T17:52:05,856 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:52:05,857 In file included from python/hkl.cpp:7: 2023-09-16T17:52:05,858 include/gemmi/fprime.hpp: In function ‘void gemmi::impl_fprim::cromer(int, double, int, const OrbitalCoef*, double*, double*)’: 2023-09-16T17:52:05,859 include/gemmi/fprime.hpp:153:11: note: at offset 256 into object ‘lndata’ of size 176 2023-09-16T17:52:05,859 153 | Point lndata[11]; 2023-09-16T17:52:05,860 | ^~~~~~ 2023-09-16T17:52:09,360 In file included from python/common.h:3, 2023-09-16T17:52:09,361 from python/hkl.cpp:13: 2023-09-16T17:52:09,361 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access<__gnu_cxx::__normal_iterator >, gemmi::ReflnBlock&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::ReflnBlock&; Extra = {}]’: 2023-09-16T17:52:09,362 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:52:09,363 2372 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) { 2023-09-16T17:52:09,364 | ^~~~~~~~~~~~~~~~~~ 2023-09-16T17:52:09,364 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:52:14,711 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::ReflnBlock&; Extra = {}]’, 2023-09-16T17:52:14,711 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-16T17:52:14,712 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:52:14,712 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:52:14,713 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-16T17:52:14,714 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:52:14,715 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:52:14,715 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-16T17:52:14,716 | ^ 2023-09-16T17:52:14,717 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::ReflnBlock&; Extra = {}]’, 2023-09-16T17:52:14,717 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-16T17:52:14,718 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:52:14,719 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:52:14,720 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-16T17:52:14,720 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:52:14,721 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:52:14,722 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-16T17:52:14,723 | ^ 2023-09-16T17:52:19,378 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2023-09-16T17:52:19,378 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:52:19,379 1908 | __introsort_loop(_RandomAccessIterator __first, 2023-09-16T17:52:19,380 | ^~~~~~~~~~~~~~~~ 2023-09-16T17:52:19,381 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:52:19,381 /usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:52:19,382 1922 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); 2023-09-16T17:52:19,383 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:52:19,481 In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, 2023-09-16T17:52:19,481 inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/include/c++/12/bits/stl_algo.h:4820:18, 2023-09-16T17:52:19,482 inlined from ‘void gemmi::Intensities::sort()’ at include/gemmi/merge.hpp:200:26, 2023-09-16T17:52:19,483 inlined from ‘void gemmi::Intensities::merge_in_place(gemmi::DataType)’ at include/gemmi/merge.hpp:210:9: 2023-09-16T17:52:19,483 /usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:52:19,484 1937 | std::__introsort_loop(__first, __last, 2023-09-16T17:52:19,484 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 2023-09-16T17:52:19,485 1938 | std::__lg(__last - __first) * 2, 2023-09-16T17:52:19,485 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:52:19,486 1939 | __comp); 2023-09-16T17:52:19,486 | ~~~~~~~ 2023-09-16T17:52:19,487 In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, 2023-09-16T17:52:19,488 inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/12/bits/stl_algo.h:1940:31, 2023-09-16T17:52:19,489 inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/include/c++/12/bits/stl_algo.h:4820:18, 2023-09-16T17:52:19,489 inlined from ‘void gemmi::Intensities::sort()’ at include/gemmi/merge.hpp:200:26, 2023-09-16T17:52:19,490 inlined from ‘void gemmi::Intensities::merge_in_place(gemmi::DataType)’ at include/gemmi/merge.hpp:210:9: 2023-09-16T17:52:19,491 /usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:52:19,491 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); 2023-09-16T17:52:19,492 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:52:19,493 /usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:52:19,493 1854 | std::__insertion_sort(__first, __last, __comp); 2023-09-16T17:52:19,494 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:52:19,495 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Intensities::Refl; _Alloc = std::allocator]’, 2023-09-16T17:52:19,495 inlined from ‘void gemmi::Intensities::merge_in_place(gemmi::DataType)’ at include/gemmi/merge.hpp:234:15: 2023-09-16T17:52:19,496 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:52:19,497 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-16T17:52:19,497 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:52:23,447 In file included from include/gemmi/fourier.hpp:19, 2023-09-16T17:52:23,448 from python/hkl.cpp:5: 2023-09-16T17:52:23,448 In member function ‘pocketfft::detail::cmplx*)this)->pocketfft::detail::cmplx::r * other))> pocketfft::detail::cmplx::operator*(const T2&) const [with T2 = float; T = float]’, 2023-09-16T17:52:23,449 inlined from ‘void pocketfft::detail::fftblue::fft(pocketfft::detail::cmplx*, T0) const [with bool fwd = true; T = float; T0 = float]’ at include/gemmi/third_party/pocketfft_hdronly.h:2260:25: 2023-09-16T17:52:23,449 include/gemmi/third_party/pocketfft_hdronly.h:236:15: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::r’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-16T17:52:23,450 236 | { return {r*other, i*other}; } 2023-09-16T17:52:23,451 | ^ 2023-09-16T17:52:23,451 include/gemmi/third_party/pocketfft_hdronly.h:236:24: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::i’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-16T17:52:23,452 236 | { return {r*other, i*other}; } 2023-09-16T17:52:23,452 | ^ 2023-09-16T17:52:23,529 In member function ‘pocketfft::detail::cmplx*)this)->pocketfft::detail::cmplx::r * other))> pocketfft::detail::cmplx::operator*(const T2&) const [with T2 = float; T = float]’, 2023-09-16T17:52:23,530 inlined from ‘void pocketfft::detail::fftblue::fft(pocketfft::detail::cmplx*, T0) const [with bool fwd = false; T = float; T0 = float]’ at include/gemmi/third_party/pocketfft_hdronly.h:2260:25: 2023-09-16T17:52:23,530 include/gemmi/third_party/pocketfft_hdronly.h:236:15: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::r’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-16T17:52:23,531 236 | { return {r*other, i*other}; } 2023-09-16T17:52:23,532 | ^ 2023-09-16T17:52:23,533 include/gemmi/third_party/pocketfft_hdronly.h:236:24: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::i’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-16T17:52:23,533 236 | { return {r*other, i*other}; } 2023-09-16T17:52:23,534 | ^ 2023-09-16T17:52:28,433 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.3\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/meta.cpp -o build/temp.linux-armv7l-cpython-311/python/meta.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T17:53:20,036 In file included from /usr/include/c++/12/vector:70, 2023-09-16T17:53:20,037 from /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../detail/common.h:314, 2023-09-16T17:53:20,038 from /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../attr.h:13, 2023-09-16T17:53:20,038 from /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/class.h:12, 2023-09-16T17:53:20,039 from /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:13, 2023-09-16T17:53:20,040 from python/common.h:3, 2023-09-16T17:53:20,040 from python/meta.cpp:3: 2023-09-16T17:53:20,041 /usr/include/c++/12/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::NcsOp; _Alloc = std::allocator]’: 2023-09-16T17:53:20,041 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:53:20,041 739 | vector<_Tp, _Alloc>:: 2023-09-16T17:53:20,042 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:53:20,043 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:53:20,043 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:53:38,985 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::NcsOp&}; _Tp = gemmi::NcsOp; _Alloc = std::allocator]’: 2023-09-16T17:53:38,985 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:53:38,986 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:53:38,987 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:53:39,056 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’: 2023-09-16T17:53:39,057 /usr/include/c++/12/bits/vector.tcc:133:5: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-16T17:53:39,057 133 | vector<_Tp, _Alloc>:: 2023-09-16T17:53:39,058 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:53:39,059 /usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:53:39,059 164 | _M_realloc_insert(begin() + (__position - cbegin()), __x); 2023-09-16T17:53:39,060 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:53:39,119 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’: 2023-09-16T17:53:39,120 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:53:39,120 175 | vector<_Tp, _Alloc>:: 2023-09-16T17:53:39,121 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:53:39,526 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Connection&}; _Tp = gemmi::Connection; _Alloc = std::allocator]’: 2023-09-16T17:53:39,526 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:53:39,527 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:53:39,528 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:53:39,721 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’: 2023-09-16T17:53:39,721 /usr/include/c++/12/bits/vector.tcc:133:5: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-16T17:53:39,722 133 | vector<_Tp, _Alloc>:: 2023-09-16T17:53:39,723 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:53:39,723 /usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:53:39,724 164 | _M_realloc_insert(begin() + (__position - cbegin()), __x); 2023-09-16T17:53:39,724 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:53:39,879 /usr/include/c++/12/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Connection; _Alloc = std::allocator]’: 2023-09-16T17:53:39,880 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:53:39,881 739 | vector<_Tp, _Alloc>:: 2023-09-16T17:53:39,881 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:53:39,882 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:53:39,883 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:53:40,025 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’: 2023-09-16T17:53:40,026 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:53:40,026 175 | vector<_Tp, _Alloc>:: 2023-09-16T17:53:40,027 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:53:43,552 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’: 2023-09-16T17:53:43,552 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:53:43,782 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’: 2023-09-16T17:53:43,783 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:53:54,417 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access<__gnu_cxx::__normal_iterator >, gemmi::NcsOp&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::NcsOp&; Extra = {}]’: 2023-09-16T17:53:54,417 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:53:54,419 2372 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) { 2023-09-16T17:53:54,419 | ^~~~~~~~~~~~~~~~~~ 2023-09-16T17:53:54,420 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:53:54,759 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Connection}; _Tp = gemmi::Connection; _Alloc = std::allocator]’: 2023-09-16T17:53:54,760 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:53:54,761 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:53:54,761 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:53:54,973 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access<__gnu_cxx::__normal_iterator >, gemmi::Connection&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Connection&; Extra = {}]’: 2023-09-16T17:53:54,974 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:53:54,974 2372 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) { 2023-09-16T17:53:54,975 | ^~~~~~~~~~~~~~~~~~ 2023-09-16T17:53:54,976 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:53:56,445 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Assembly::Operator}; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’: 2023-09-16T17:53:56,446 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:53:56,447 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:53:56,447 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:53:56,562 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access<__gnu_cxx::__normal_iterator >, gemmi::Assembly::Operator&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Assembly::Operator&; Extra = {}]’: 2023-09-16T17:53:56,562 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:53:56,564 2372 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) { 2023-09-16T17:53:56,564 | ^~~~~~~~~~~~~~~~~~ 2023-09-16T17:53:56,565 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:53:56,900 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access<__gnu_cxx::__normal_iterator >, gemmi::Assembly&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Assembly&; Extra = {}]’: 2023-09-16T17:53:56,901 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:53:56,902 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:53:57,814 In file included from /usr/include/c++/12/vector:64: 2023-09-16T17:53:57,815 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-16T17:53:57,816 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-16T17:53:57,816 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:53:57,817 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:53:57,818 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:53:57,819 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:53:57,820 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:53:57,821 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:53:57,821 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:53:57,822 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-16T17:53:57,823 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-16T17:53:57,823 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:53:57,824 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:53:57,825 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:53:57,826 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:53:57,826 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:53:57,827 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:53:57,828 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:53:58,108 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-16T17:53:58,109 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-16T17:53:58,109 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:53:58,110 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:53:58,111 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:53:58,111 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:53:58,112 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:53:58,113 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:53:58,113 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:53:58,114 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-16T17:53:58,115 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-16T17:53:58,115 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:53:58,116 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:53:58,117 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:53:58,117 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:53:58,118 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:53:58,119 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:53:58,120 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:53:59,449 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-16T17:53:59,450 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-16T17:53:59,451 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:53:59,451 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:53:59,452 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:53:59,453 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:53:59,454 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:53:59,454 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:53:59,455 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:53:59,456 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-16T17:53:59,456 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-16T17:53:59,457 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:53:59,458 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:53:59,458 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:53:59,459 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:53:59,460 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:53:59,460 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:53:59,461 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:53:59,689 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-16T17:53:59,700 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-16T17:53:59,700 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:53:59,701 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-16T17:53:59,702 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:53:59,703 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:53:59,704 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:53:59,704 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:53:59,705 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:53:59,706 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-16T17:53:59,706 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-16T17:53:59,707 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:53:59,708 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-16T17:53:59,709 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:53:59,709 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:53:59,710 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:53:59,711 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:53:59,712 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:53:59,779 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-16T17:53:59,780 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Connection; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-16T17:53:59,781 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-16T17:53:59,782 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:53:59,782 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:53:59,783 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:53:59,784 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:53:59,785 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:53:59,785 1779 | _M_range_insert(__pos, __first, __last, 2023-09-16T17:53:59,786 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:53:59,787 1780 | std::__iterator_category(__first)); 2023-09-16T17:53:59,788 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:53:59,788 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:53:59,789 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-16T17:53:59,790 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Connection; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-16T17:53:59,791 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-16T17:53:59,791 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:53:59,792 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:53:59,793 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:53:59,794 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:53:59,794 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:53:59,795 1779 | _M_range_insert(__pos, __first, __last, 2023-09-16T17:53:59,796 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:53:59,796 1780 | std::__iterator_category(__first)); 2023-09-16T17:53:59,797 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:53:59,798 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:53:59,875 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-16T17:53:59,875 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-16T17:53:59,876 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Connection&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:53:59,877 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Connection&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:53:59,878 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Connection&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Connection&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:53:59,878 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Connection&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Connection&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:53:59,879 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:53:59,880 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:53:59,881 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:53:59,882 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-16T17:53:59,882 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-16T17:53:59,883 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Connection&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:53:59,884 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Connection&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:53:59,885 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Connection&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Connection&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:53:59,885 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Connection&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Connection&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:53:59,886 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:53:59,887 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:53:59,887 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:54:00,109 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-16T17:54:00,110 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-16T17:54:00,111 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:00,112 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:00,112 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:54:00,113 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:00,114 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:00,114 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:54:00,115 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:00,115 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-16T17:54:00,116 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-16T17:54:00,116 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:00,117 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:00,117 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:54:00,118 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:00,119 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:00,120 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:54:00,120 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:00,314 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-16T17:54:00,315 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-16T17:54:00,316 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:00,317 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-16T17:54:00,317 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:54:00,318 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:00,319 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:00,319 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:54:00,320 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:54:00,321 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-16T17:54:00,322 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-16T17:54:00,322 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:00,323 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-16T17:54:00,324 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:54:00,324 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:00,325 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:00,326 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:54:00,326 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:54:00,404 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-16T17:54:00,404 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::NcsOp; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-16T17:54:00,405 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-16T17:54:00,406 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:00,407 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:00,407 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:54:00,408 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:00,409 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:54:00,409 1779 | _M_range_insert(__pos, __first, __last, 2023-09-16T17:54:00,410 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:00,410 1780 | std::__iterator_category(__first)); 2023-09-16T17:54:00,411 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:00,411 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:00,412 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-16T17:54:00,412 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::NcsOp; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-16T17:54:00,413 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-16T17:54:00,413 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:00,414 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:00,415 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:54:00,416 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:00,417 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:54:00,417 1779 | _M_range_insert(__pos, __first, __last, 2023-09-16T17:54:00,418 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:00,418 1780 | std::__iterator_category(__first)); 2023-09-16T17:54:00,419 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:00,419 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:00,520 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-16T17:54:00,521 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-16T17:54:00,521 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::NcsOp&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:00,522 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::NcsOp&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:00,523 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::NcsOp&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::NcsOp&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:54:00,523 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::NcsOp&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::NcsOp&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:00,524 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:00,525 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:54:00,525 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:54:00,526 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-16T17:54:00,527 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-16T17:54:00,527 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::NcsOp&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:00,528 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::NcsOp&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:00,529 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::NcsOp&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::NcsOp&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:54:00,530 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::NcsOp&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::NcsOp&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:00,531 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:00,531 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:54:00,532 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:54:01,105 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Assembly::Operator}; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-16T17:54:01,106 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-16T17:54:01,107 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:156:25, 2023-09-16T17:54:01,107 inlined from ‘pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/init.h:303:33, 2023-09-16T17:54:01,108 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {pybind11::detail::value_and_holder&, const pybind11::iterable&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:01,109 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&; Args = {pybind11::detail::value_and_holder&, const pybind11::iterable&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:01,110 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::, void, pybind11::detail::value_and_holder&, const pybind11::iterable&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor>(pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&&, void (*)(pybind11::detail::value_and_holder&, const pybind11::iterable&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::detail::is_new_style_constructor&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:54:01,110 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::, void, pybind11::detail::value_and_holder&, const pybind11::iterable&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor>(pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&&, void (*)(pybind11::detail::value_and_holder&, const pybind11::iterable&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::detail::is_new_style_constructor&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:01,111 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:01,112 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T17:54:01,112 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:01,113 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Assembly::Operator}; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-16T17:54:01,114 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-16T17:54:01,114 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:156:25, 2023-09-16T17:54:01,115 inlined from ‘pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/init.h:303:33, 2023-09-16T17:54:01,115 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {pybind11::detail::value_and_holder&, const pybind11::iterable&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:01,116 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&; Args = {pybind11::detail::value_and_holder&, const pybind11::iterable&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:01,117 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::, void, pybind11::detail::value_and_holder&, const pybind11::iterable&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor>(pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&&, void (*)(pybind11::detail::value_and_holder&, const pybind11::iterable&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::detail::is_new_style_constructor&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:54:01,117 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::, void, pybind11::detail::value_and_holder&, const pybind11::iterable&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor>(pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&&, void (*)(pybind11::detail::value_and_holder&, const pybind11::iterable&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::detail::is_new_style_constructor&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:01,119 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:01,119 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T17:54:01,120 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:03,516 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Connection}; _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-16T17:54:03,631 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-16T17:54:03,632 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::iterable&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:177:32: 2023-09-16T17:54:03,633 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:03,634 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T17:54:03,635 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:03,949 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Connection}; _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-16T17:54:03,949 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-16T17:54:03,950 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:156:25: 2023-09-16T17:54:03,950 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:03,951 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T17:54:03,952 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:08,455 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Assembly&; Extra = {}]’, 2023-09-16T17:54:08,456 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-16T17:54:08,457 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:54:08,457 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:54:08,458 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-16T17:54:08,459 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:08,459 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:08,460 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-16T17:54:08,461 | ^ 2023-09-16T17:54:08,461 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Assembly&; Extra = {}]’, 2023-09-16T17:54:08,462 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-16T17:54:08,462 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:54:08,463 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:54:08,464 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-16T17:54:08,465 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:08,466 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:08,466 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-16T17:54:08,467 | ^ 2023-09-16T17:54:08,531 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Connection&; Extra = {}]’, 2023-09-16T17:54:08,531 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-16T17:54:08,532 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:54:08,532 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:54:08,533 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-16T17:54:08,534 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:08,535 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:08,535 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-16T17:54:08,536 | ^ 2023-09-16T17:54:08,537 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Connection&; Extra = {}]’, 2023-09-16T17:54:08,538 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-16T17:54:08,539 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:54:08,540 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:54:08,540 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-16T17:54:08,541 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:08,542 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:08,543 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-16T17:54:08,543 | ^ 2023-09-16T17:54:08,573 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::NcsOp&; Extra = {}]’, 2023-09-16T17:54:08,574 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-16T17:54:08,575 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:54:08,575 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:54:08,576 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-16T17:54:08,577 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:08,578 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:08,578 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-16T17:54:08,579 | ^ 2023-09-16T17:54:08,580 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::NcsOp&; Extra = {}]’, 2023-09-16T17:54:08,580 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-16T17:54:08,581 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:54:08,582 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:54:08,583 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-16T17:54:08,583 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:08,584 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:08,585 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-16T17:54:08,585 | ^ 2023-09-16T17:54:08,714 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Assembly::Operator&; Extra = {}]’, 2023-09-16T17:54:08,715 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-16T17:54:08,716 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:54:08,716 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:54:08,717 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-16T17:54:08,718 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:08,718 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:08,719 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-16T17:54:08,719 | ^ 2023-09-16T17:54:08,720 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Assembly::Operator&; Extra = {}]’, 2023-09-16T17:54:08,721 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-16T17:54:08,721 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:54:08,722 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:54:08,723 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-16T17:54:08,723 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:08,724 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:08,725 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-16T17:54:08,725 | ^ 2023-09-16T17:54:09,724 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-16T17:54:09,725 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-16T17:54:09,725 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Assembly; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:54:09,726 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Assembly; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:54:09,727 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Assembly, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Assembly (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17: 2023-09-16T17:54:09,728 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:09,728 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:54:09,729 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:09,730 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-16T17:54:09,730 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-16T17:54:09,731 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Assembly; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:54:09,732 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Assembly; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:54:09,732 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Assembly, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Assembly (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40: 2023-09-16T17:54:09,733 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:09,734 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:54:09,735 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:09,921 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-16T17:54:09,922 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-16T17:54:09,923 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Assembly::Operator; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:54:09,923 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Assembly::Operator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:54:09,924 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Assembly::Operator, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Assembly::Operator (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17: 2023-09-16T17:54:09,924 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:09,925 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:54:09,926 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:09,927 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-16T17:54:09,927 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-16T17:54:09,928 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Assembly::Operator; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:54:09,928 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Assembly::Operator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:54:09,929 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Assembly::Operator, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Assembly::Operator (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40: 2023-09-16T17:54:09,930 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:09,931 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:54:09,931 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:10,561 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-16T17:54:10,562 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-16T17:54:10,563 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Connection; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:54:10,563 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Connection; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:54:10,564 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Connection, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Connection (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17: 2023-09-16T17:54:10,565 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:10,566 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:54:10,566 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:10,567 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-16T17:54:10,567 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-16T17:54:10,568 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Connection; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:54:10,568 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Connection; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:54:10,569 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Connection, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Connection (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40: 2023-09-16T17:54:10,570 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:10,570 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:54:10,571 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:10,846 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-16T17:54:10,847 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-16T17:54:10,848 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::NcsOp; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:54:10,848 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::NcsOp; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:54:10,849 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::NcsOp, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::NcsOp (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17: 2023-09-16T17:54:10,850 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:10,850 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:54:10,851 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:10,852 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-16T17:54:10,852 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-16T17:54:10,853 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::NcsOp; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:54:10,854 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::NcsOp; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:54:10,854 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::NcsOp, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::NcsOp (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40: 2023-09-16T17:54:10,855 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:10,856 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:54:10,856 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:11,381 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-16T17:54:11,381 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-16T17:54:11,382 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:11,383 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:11,383 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:54:11,384 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:11,385 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:11,385 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:54:11,386 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:11,387 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-16T17:54:11,387 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-16T17:54:11,388 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:11,388 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:11,389 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:54:11,390 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:11,391 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:11,392 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:54:11,392 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:11,454 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-16T17:54:11,456 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-16T17:54:11,457 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:11,458 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:11,459 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:54:11,460 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:11,461 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:11,463 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:54:11,463 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:11,464 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-16T17:54:11,465 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-16T17:54:11,466 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:11,467 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:11,468 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:54:11,469 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:11,471 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:11,472 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:54:11,473 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:11,601 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-16T17:54:11,601 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-16T17:54:11,602 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:11,603 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:11,604 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:54:11,604 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:11,605 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:11,606 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:54:11,606 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:11,607 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-16T17:54:11,608 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-16T17:54:11,608 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:11,609 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:11,610 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:54:11,610 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:11,611 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:11,612 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:54:11,612 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:11,748 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-16T17:54:11,749 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-16T17:54:11,749 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:11,750 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:11,751 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:54:11,752 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:11,752 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:11,753 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:54:11,754 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:11,754 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-16T17:54:11,755 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-16T17:54:11,756 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:11,757 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:11,757 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:54:11,758 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:11,758 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:11,759 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:54:11,760 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:12,116 In file included from python/meta.cpp:5: 2023-09-16T17:54:12,117 In lambda function, 2023-09-16T17:54:12,117 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Connection&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:12,118 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Connection&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:12,118 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Connection&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Connection&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:54:12,119 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Connection&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Connection&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:12,120 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-16T17:54:12,121 203 | v.insert(v.begin() + i, x); 2023-09-16T17:54:12,121 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:12,122 In lambda function, 2023-09-16T17:54:12,123 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Connection&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:12,123 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Connection&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:12,124 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Connection&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Connection&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:54:12,125 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Connection&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Connection&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:12,126 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-16T17:54:12,126 203 | v.insert(v.begin() + i, x); 2023-09-16T17:54:12,127 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:12,206 In lambda function, 2023-09-16T17:54:12,206 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::NcsOp&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:12,207 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::NcsOp&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:12,208 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::NcsOp&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::NcsOp&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:54:12,208 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::NcsOp&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::NcsOp&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:12,209 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-16T17:54:12,210 203 | v.insert(v.begin() + i, x); 2023-09-16T17:54:12,210 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:12,211 In lambda function, 2023-09-16T17:54:12,213 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::NcsOp&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:12,213 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::NcsOp&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:12,213 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::NcsOp&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::NcsOp&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:54:12,214 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::NcsOp&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::NcsOp&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:12,215 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-16T17:54:12,216 203 | v.insert(v.begin() + i, x); 2023-09-16T17:54:12,216 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:13,935 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Assembly::Operator&}; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’: 2023-09-16T17:54:13,936 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:54:13,936 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:54:13,937 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:14,035 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’: 2023-09-16T17:54:14,035 /usr/include/c++/12/bits/vector.tcc:133:5: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-16T17:54:14,036 133 | vector<_Tp, _Alloc>:: 2023-09-16T17:54:14,037 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:14,038 /usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:14,039 164 | _M_realloc_insert(begin() + (__position - cbegin()), __x); 2023-09-16T17:54:14,040 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:14,108 In lambda function, 2023-09-16T17:54:14,108 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Assembly::Operator&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:14,109 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Assembly::Operator&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:14,110 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Assembly::Operator&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Assembly::Operator&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:54:14,111 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Assembly::Operator&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Assembly::Operator&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:14,112 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-16T17:54:14,112 203 | v.insert(v.begin() + i, x); 2023-09-16T17:54:14,113 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:14,113 In lambda function, 2023-09-16T17:54:14,114 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Assembly::Operator&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:14,114 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Assembly::Operator&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:14,115 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Assembly::Operator&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Assembly::Operator&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:54:14,116 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Assembly::Operator&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Assembly::Operator&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:14,116 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-16T17:54:14,117 203 | v.insert(v.begin() + i, x); 2023-09-16T17:54:14,117 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:14,215 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-16T17:54:14,215 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-16T17:54:14,216 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:14,217 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-16T17:54:14,218 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:54:14,218 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:14,219 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:14,220 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:54:14,220 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:54:14,221 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-16T17:54:14,222 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-16T17:54:14,223 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:14,223 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-16T17:54:14,224 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:54:14,225 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:14,225 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:14,226 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:54:14,227 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:54:14,311 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-16T17:54:14,312 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-16T17:54:14,313 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Assembly::Operator&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:14,314 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Assembly::Operator&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:14,317 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Assembly::Operator&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Assembly::Operator&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:54:14,318 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Assembly::Operator&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Assembly::Operator&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:14,319 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:14,320 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:54:14,320 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:54:14,321 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-16T17:54:14,322 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-16T17:54:14,323 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Assembly::Operator&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:14,323 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Assembly::Operator&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:14,324 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Assembly::Operator&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Assembly::Operator&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:54:14,325 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Assembly::Operator&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Assembly::Operator&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:14,326 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:14,326 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:54:14,327 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:54:14,432 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Assembly::Operator}; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-16T17:54:14,432 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-16T17:54:14,433 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::iterable&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:177:32: 2023-09-16T17:54:14,434 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:14,435 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T17:54:14,436 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:14,896 /usr/include/c++/12/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’: 2023-09-16T17:54:14,897 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:54:14,897 739 | vector<_Tp, _Alloc>:: 2023-09-16T17:54:14,898 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:14,898 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:14,899 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:15,009 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-16T17:54:15,010 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-16T17:54:15,011 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-16T17:54:15,012 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:15,012 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:15,014 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:54:15,015 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:15,015 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:54:15,016 1779 | _M_range_insert(__pos, __first, __last, 2023-09-16T17:54:15,017 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:15,017 1780 | std::__iterator_category(__first)); 2023-09-16T17:54:15,018 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:15,019 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:15,020 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-16T17:54:15,020 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-16T17:54:15,021 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-16T17:54:15,021 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:15,022 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:15,023 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:54:15,024 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:15,024 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:54:15,025 1779 | _M_range_insert(__pos, __first, __last, 2023-09-16T17:54:15,026 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:15,027 1780 | std::__iterator_category(__first)); 2023-09-16T17:54:15,027 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:15,027 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:16,126 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Assembly&}; _Tp = gemmi::Assembly; _Alloc = std::allocator]’: 2023-09-16T17:54:16,127 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:54:16,127 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:54:16,128 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:16,258 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’: 2023-09-16T17:54:16,259 /usr/include/c++/12/bits/vector.tcc:133:5: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-16T17:54:16,260 133 | vector<_Tp, _Alloc>:: 2023-09-16T17:54:16,260 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:16,261 /usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:16,262 164 | _M_realloc_insert(begin() + (__position - cbegin()), __x); 2023-09-16T17:54:16,263 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:16,341 In lambda function, 2023-09-16T17:54:16,342 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Assembly&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:16,342 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Assembly&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:16,343 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Assembly&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Assembly&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:54:16,344 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Assembly&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Assembly&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:16,344 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-16T17:54:16,345 203 | v.insert(v.begin() + i, x); 2023-09-16T17:54:16,346 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:16,347 In lambda function, 2023-09-16T17:54:16,347 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Assembly&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:16,348 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Assembly&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:16,348 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Assembly&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Assembly&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:54:16,349 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Assembly&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Assembly&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:16,350 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-16T17:54:16,350 203 | v.insert(v.begin() + i, x); 2023-09-16T17:54:16,351 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:16,436 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-16T17:54:16,437 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-16T17:54:16,438 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:16,438 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-16T17:54:16,439 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:54:16,440 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:16,441 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:16,442 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:54:16,442 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:54:16,443 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-16T17:54:16,444 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-16T17:54:16,445 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:16,445 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-16T17:54:16,446 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:54:16,447 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:16,447 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:16,448 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:54:16,449 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:54:16,631 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-16T17:54:16,632 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-16T17:54:16,632 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Assembly&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:16,633 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Assembly&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:16,634 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Assembly&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Assembly&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:54:16,634 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Assembly&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Assembly&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:16,635 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:16,636 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:54:16,636 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:54:16,637 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-16T17:54:16,638 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-16T17:54:16,638 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Assembly&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:16,639 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Assembly&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:16,639 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Assembly&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Assembly&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:54:16,640 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Assembly&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Assembly&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:16,641 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:16,641 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:54:16,642 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:54:18,380 /usr/include/c++/12/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly; _Alloc = std::allocator]’: 2023-09-16T17:54:18,381 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:54:18,382 739 | vector<_Tp, _Alloc>:: 2023-09-16T17:54:18,382 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:18,383 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:18,384 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:18,506 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-16T17:54:18,507 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Assembly; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-16T17:54:18,507 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-16T17:54:18,508 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:18,508 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:18,509 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:54:18,510 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:18,511 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:54:18,511 1779 | _M_range_insert(__pos, __first, __last, 2023-09-16T17:54:18,512 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:18,513 1780 | std::__iterator_category(__first)); 2023-09-16T17:54:18,514 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:18,514 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:18,515 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-16T17:54:18,515 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Assembly; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-16T17:54:18,516 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-16T17:54:18,516 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:54:18,517 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:54:18,518 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:54:18,519 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:54:18,519 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:54:18,520 1779 | _M_range_insert(__pos, __first, __last, 2023-09-16T17:54:18,521 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:18,521 1780 | std::__iterator_category(__first)); 2023-09-16T17:54:18,522 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:54:18,522 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:54:26,034 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.3\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/mol.cpp -o build/temp.linux-armv7l-cpython-311/python/mol.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T17:55:19,160 In file included from /usr/include/c++/12/vector:70, 2023-09-16T17:55:19,161 from include/gemmi/model.hpp:15, 2023-09-16T17:55:19,161 from python/mol.cpp:3: 2023-09-16T17:55:19,162 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator, iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’: 2023-09-16T17:55:19,162 /usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:55:19,163 189 | vector<_Tp, _Alloc>:: 2023-09-16T17:55:19,163 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:55:19,164 /usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:55:19,276 In file included from /usr/include/c++/12/vector:64: 2023-09-16T17:55:19,277 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-16T17:55:19,277 inlined from ‘void gemmi::vector_remove_if(std::vector&, F&&) [with T = Atom; F = trim_to_alanine(Residue&)::]’ at include/gemmi/util.hpp:245:10, 2023-09-16T17:55:19,278 inlined from ‘bool gemmi::trim_to_alanine(Residue&)’ at include/gemmi/polyheur.hpp:321:19: 2023-09-16T17:55:19,278 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:55:19,279 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-16T17:55:19,280 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:55:20,948 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-16T17:55:20,948 inlined from ‘void gemmi::vector_remove_if(std::vector&, F&&) [with T = Atom; F = remove_hydrogens(Residue&)::]’ at include/gemmi/util.hpp:245:10: 2023-09-16T17:55:20,949 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:55:20,950 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-16T17:55:20,950 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:55:29,987 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Mat33, gemmi::Vec3}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-16T17:55:29,989 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:55:29,989 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:55:29,990 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:55:30,043 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::FTransform&}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-16T17:55:30,044 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:55:30,097 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Transform}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-16T17:55:30,098 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:55:30,144 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::FTransform&}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-16T17:55:30,145 inlined from ‘void gemmi::UnitCell::add_ncs_images_to_cs_images(const std::vector&)’ at include/gemmi/unitcell.hpp:336:28: 2023-09-16T17:55:30,146 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:55:30,146 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T17:55:30,147 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:55:30,148 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Transform}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-16T17:55:30,149 inlined from ‘void gemmi::UnitCell::add_ncs_images_to_cs_images(const std::vector&)’ at include/gemmi/unitcell.hpp:338:30: 2023-09-16T17:55:30,149 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:55:30,150 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T17:55:30,151 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:55:30,847 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’: 2023-09-16T17:55:30,848 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:55:30,848 175 | vector<_Tp, _Alloc>:: 2023-09-16T17:55:30,849 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:55:30,885 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-16T17:55:30,885 inlined from ‘void remove_child(P&, int) [with P = gemmi::Residue]’ at python/mol.cpp:40:17: 2023-09-16T17:55:30,886 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:55:30,887 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:55:30,888 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:55:30,986 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-16T17:55:30,986 inlined from ‘void gemmi::remove_alternative_conformations(T&) [with T = Chain]’ at include/gemmi/modify.hpp:37:28: 2023-09-16T17:55:30,987 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:55:30,988 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:55:30,988 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:55:32,687 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Mat33, gemmi::Vec3}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-16T17:55:32,787 inlined from ‘void gemmi::UnitCell::set_cell_images_from_spacegroup(const gemmi::SpaceGroup*)’ at include/gemmi/unitcell.hpp:326:26: 2023-09-16T17:55:32,859 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:55:32,893 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T17:55:33,001 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:55:33,418 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Connection&}; _Tp = gemmi::Connection; _Alloc = std::allocator]’: 2023-09-16T17:55:33,419 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:55:33,419 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:55:33,420 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:55:35,919 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-16T17:55:35,920 inlined from ‘void delitem_range(std::vector&, pybind11::ssize_t, pybind11::ssize_t) [with Item = gemmi::Atom]’ at python/common.h:59:14, 2023-09-16T17:55:35,921 inlined from ‘void delitem_slice(Items&, const pybind11::slice&) [with Items = std::vector]’ at python/common.h:69:18, 2023-09-16T17:55:35,922 inlined from ‘void remove_children(P&, pybind11::slice) [with P = gemmi::Residue]’ at python/mol.cpp:44:16: 2023-09-16T17:55:35,922 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:55:35,923 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-16T17:55:35,923 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:55:35,924 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-16T17:55:35,925 inlined from ‘void delitem_at_index(std::vector&, pybind11::ssize_t) [with Item = gemmi::Atom]’ at python/common.h:54:14, 2023-09-16T17:55:35,925 inlined from ‘void delitem_slice(Items&, const pybind11::slice&) [with Items = std::vector]’ at python/common.h:72:23, 2023-09-16T17:55:35,926 inlined from ‘void remove_children(P&, pybind11::slice) [with P = gemmi::Residue]’ at python/mol.cpp:44:16: 2023-09-16T17:55:35,927 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:55:35,928 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:55:35,928 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:55:39,601 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-16T17:55:39,602 inlined from ‘void gemmi::expand_ncs(Structure&, HowToNameCopiedChain)’ at include/gemmi/assembly.hpp:264:37: 2023-09-16T17:55:39,606 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:55:39,607 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:55:39,608 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:55:59,024 In file included from python/common.h:3, 2023-09-16T17:55:59,024 from python/mol.cpp:10: 2023-09-16T17:55:59,032 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access<__gnu_cxx::__normal_iterator >, const gemmi::Atom&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = const gemmi::Atom&; Extra = {}]’: 2023-09-16T17:55:59,099 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:55:59,131 2372 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) { 2023-09-16T17:55:59,204 | ^~~~~~~~~~~~~~~~~~ 2023-09-16T17:55:59,274 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:55:59,461 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access, gemmi::Atom> >, gemmi::Atom&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = gemmi::BidirIterator, gemmi::Atom> >; Sentinel = gemmi::BidirIterator, gemmi::Atom> >; ValueType = gemmi::Atom&; Extra = {}]’: 2023-09-16T17:55:59,488 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-16T17:55:59,551 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-16T17:56:07,969 In file included from /usr/include/c++/12/vector:63: 2023-09-16T17:56:07,970 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*]’: 2023-09-16T17:56:07,970 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:07,971 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-16T17:56:07,971 | ^~~~~~~~~~~~~~~~ 2023-09-16T17:56:07,972 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:08,042 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*; bool _TrivialValueTypes = false]’, 2023-09-16T17:56:08,043 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:56:08,043 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*; _Tp = gemmi::NcsOp]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:56:08,044 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::NcsOp; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-16T17:56:08,045 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-16T17:56:08,045 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:08,046 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:56:08,046 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:56:08,093 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*; bool _TrivialValueTypes = false]’, 2023-09-16T17:56:08,094 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:56:08,095 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*; _Tp = gemmi::NcsOp]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:56:08,095 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T17:56:08,096 inlined from ‘pybind11::detail::type_caster_base >::make_copy_constructor >(const std::vector*)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../detail/type_caster_base.h:1152:55, 2023-09-16T17:56:08,097 inlined from ‘static constexpr void* pybind11::detail::type_caster_base >::make_copy_constructor >(const std::vector*)::::_FUN(const void*)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../detail/type_caster_base.h:1152:16: 2023-09-16T17:56:08,097 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:08,098 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:56:08,098 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:56:08,199 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*]’: 2023-09-16T17:56:08,200 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:08,200 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-16T17:56:08,201 | ^~~~~~~~~~~~~~~~ 2023-09-16T17:56:08,202 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:08,436 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*; bool _TrivialValueTypes = false]’, 2023-09-16T17:56:08,436 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:56:08,437 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*; _Tp = gemmi::Connection]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:56:08,438 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Connection; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-16T17:56:08,438 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-16T17:56:08,439 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:08,440 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:56:08,440 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:56:08,541 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*; bool _TrivialValueTypes = false]’, 2023-09-16T17:56:08,542 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:56:08,543 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*; _Tp = gemmi::Connection]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:56:08,543 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T17:56:08,544 inlined from ‘pybind11::detail::type_caster_base >::make_copy_constructor >(const std::vector*)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../detail/type_caster_base.h:1152:55, 2023-09-16T17:56:08,544 inlined from ‘static constexpr void* pybind11::detail::type_caster_base >::make_copy_constructor >(const std::vector*)::::_FUN(const void*)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../detail/type_caster_base.h:1152:16: 2023-09-16T17:56:08,545 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:08,546 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:56:08,546 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:56:09,095 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*]’: 2023-09-16T17:56:09,096 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:09,096 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-16T17:56:09,097 | ^~~~~~~~~~~~~~~~ 2023-09-16T17:56:09,098 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:10,380 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Atom}; _Tp = gemmi::Atom; _Alloc = std::allocator]’: 2023-09-16T17:56:10,380 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:56:10,381 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:56:10,381 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:56:10,504 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_insert_rval(const_iterator, value_type&&) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-16T17:56:10,505 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, value_type&&) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1389:30, 2023-09-16T17:56:10,506 inlined from ‘C& add_item(T&, C, int) [with T = std::vector; C = gemmi::Atom]’ at python/mol.cpp:25:27, 2023-09-16T17:56:10,506 inlined from ‘C& add_child(P&, C, int) [with P = gemmi::Residue; C = gemmi::Atom]’ at python/mol.cpp:30:18: 2023-09-16T17:56:10,507 /usr/include/c++/12/bits/vector.tcc:366:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:10,507 366 | _M_realloc_insert(begin() + __n, std::move(__v)); 2023-09-16T17:56:10,508 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:56:14,595 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = gemmi::BidirIterator, gemmi::Atom> >; Sentinel = gemmi::BidirIterator, gemmi::Atom> >; ValueType = gemmi::Atom&; Extra = {}]’, 2023-09-16T17:56:14,596 inlined from ‘pybind11::iterator pybind11::make_iterator(Type&, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Type = gemmi::UniqProxy; Extra = {}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2457:74, 2023-09-16T17:56:14,597 inlined from ‘add_mol(pybind11::module&)::&)>’ at python/mol.cpp:250:38, 2023-09-16T17:56:14,597 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = add_mol(pybind11::module&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {gemmi::UniqProxy > >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:56:14,598 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = add_mol(pybind11::module&)::&)>&; Args = {gemmi::UniqProxy > >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:56:14,599 inlined from ‘pybind11::cpp_function::initialize&)>, pybind11::iterator, gemmi::UniqProxy > >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(add_mol(pybind11::module&)::&)>&&, pybind11::iterator (*)(gemmi::UniqProxy&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-16T17:56:14,600 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize&)>, pybind11::iterator, gemmi::UniqProxy > >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(add_mol(pybind11::module&)::&)>&&, pybind11::iterator (*)(gemmi::UniqProxy&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:56:14,600 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-16T17:56:14,601 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-16T17:56:14,602 | ^ 2023-09-16T17:56:14,602 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-16T17:56:14,603 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-16T17:56:14,604 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = gemmi::BidirIterator, gemmi::Atom> >; Sentinel = gemmi::BidirIterator, gemmi::Atom> >; ValueType = gemmi::Atom&; Extra = {}]’, 2023-09-16T17:56:14,604 inlined from ‘pybind11::iterator pybind11::make_iterator(Type&, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Type = gemmi::UniqProxy; Extra = {}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2457:74, 2023-09-16T17:56:14,605 inlined from ‘add_mol(pybind11::module&)::&)>’ at python/mol.cpp:250:38, 2023-09-16T17:56:14,606 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = add_mol(pybind11::module&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {gemmi::UniqProxy > >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:56:14,606 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = add_mol(pybind11::module&)::&)>&; Args = {gemmi::UniqProxy > >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:56:14,607 inlined from ‘pybind11::cpp_function::initialize&)>, pybind11::iterator, gemmi::UniqProxy > >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(add_mol(pybind11::module&)::&)>&&, pybind11::iterator (*)(gemmi::UniqProxy&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-16T17:56:14,608 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize&)>, pybind11::iterator, gemmi::UniqProxy > >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(add_mol(pybind11::module&)::&)>&&, pybind11::iterator (*)(gemmi::UniqProxy&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:56:14,608 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-16T17:56:14,609 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-16T17:56:14,610 | ^ 2023-09-16T17:56:14,610 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-16T17:56:14,611 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-16T17:56:19,289 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = const gemmi::Atom&; Extra = {}]’, 2023-09-16T17:56:19,289 inlined from ‘pybind11::iterator pybind11::make_iterator(Type&, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Type = const std::vector; Extra = {}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2457:74, 2023-09-16T17:56:19,290 inlined from ‘add_mol(pybind11::module&)::’ at python/mol.cpp:407:43, 2023-09-16T17:56:19,291 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = add_mol(pybind11::module&)::&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {const gemmi::Residue&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:56:19,291 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = add_mol(pybind11::module&)::&; Args = {const gemmi::Residue&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:56:19,292 inlined from ‘pybind11::cpp_function::initialize, pybind11::iterator, const gemmi::Residue&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(add_mol(pybind11::module&)::&&, pybind11::iterator (*)(const gemmi::Residue&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-16T17:56:19,292 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::iterator, const gemmi::Residue&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(add_mol(pybind11::module&)::&&, pybind11::iterator (*)(const gemmi::Residue&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:56:19,293 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:19,294 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-16T17:56:19,294 | ^ 2023-09-16T17:56:19,295 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = const gemmi::Atom&; Extra = {}]’, 2023-09-16T17:56:19,296 inlined from ‘pybind11::iterator pybind11::make_iterator(Type&, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Type = const std::vector; Extra = {}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2457:74, 2023-09-16T17:56:19,297 inlined from ‘add_mol(pybind11::module&)::’ at python/mol.cpp:407:43, 2023-09-16T17:56:19,297 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = add_mol(pybind11::module&)::&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {const gemmi::Residue&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:56:19,298 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = add_mol(pybind11::module&)::&; Args = {const gemmi::Residue&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:56:19,298 inlined from ‘pybind11::cpp_function::initialize, pybind11::iterator, const gemmi::Residue&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(add_mol(pybind11::module&)::&&, pybind11::iterator (*)(const gemmi::Residue&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-16T17:56:19,299 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::iterator, const gemmi::Residue&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(add_mol(pybind11::module&)::&&, pybind11::iterator (*)(const gemmi::Residue&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:56:19,300 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:19,300 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-16T17:56:19,301 | ^ 2023-09-16T17:56:22,802 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-16T17:56:23,024 inlined from ‘add_mol(pybind11::module&)::’ at python/mol.cpp:421:28, 2023-09-16T17:56:23,163 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = add_mol(pybind11::module&)::&; unsigned int ...Is = {0, 1, 2, 3}; Guard = pybind11::detail::void_type; Args = {gemmi::Residue&, const std::__cxx11::basic_string, std::allocator >&, char, gemmi::Element}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:56:23,199 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = add_mol(pybind11::module&)::&; Args = {gemmi::Residue&, const std::__cxx11::basic_string, std::allocator >&, char, gemmi::Element}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:56:23,631 inlined from ‘pybind11::cpp_function::initialize, void, gemmi::Residue&, const std::__cxx11::basic_string, std::allocator >&, char, gemmi::Element, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, pybind11::arg_v>(add_mol(pybind11::module&)::&&, void (*)(gemmi::Residue&, const std::__cxx11::basic_string&, char, gemmi::Element), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const pybind11::arg_v&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:56:23,762 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, void, gemmi::Residue&, const std::__cxx11::basic_string, std::allocator >&, char, gemmi::Element, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, pybind11::arg_v>(add_mol(pybind11::module&)::&&, void (*)(gemmi::Residue&, const std::__cxx11::basic_string&, char, gemmi::Element), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const pybind11::arg_v&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:56:23,827 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:23,966 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:56:24,012 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:56:24,054 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-16T17:56:24,072 inlined from ‘add_mol(pybind11::module&)::’ at python/mol.cpp:421:28, 2023-09-16T17:56:24,168 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = add_mol(pybind11::module&)::&; unsigned int ...Is = {0, 1, 2, 3}; Guard = pybind11::detail::void_type; Args = {gemmi::Residue&, const std::__cxx11::basic_string, std::allocator >&, char, gemmi::Element}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:56:24,228 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = add_mol(pybind11::module&)::&; Args = {gemmi::Residue&, const std::__cxx11::basic_string, std::allocator >&, char, gemmi::Element}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:56:24,462 inlined from ‘pybind11::cpp_function::initialize, void, gemmi::Residue&, const std::__cxx11::basic_string, std::allocator >&, char, gemmi::Element, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, pybind11::arg_v>(add_mol(pybind11::module&)::&&, void (*)(gemmi::Residue&, const std::__cxx11::basic_string&, char, gemmi::Element), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const pybind11::arg_v&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:56:24,464 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, void, gemmi::Residue&, const std::__cxx11::basic_string, std::allocator >&, char, gemmi::Element, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, pybind11::arg_v>(add_mol(pybind11::module&)::&&, void (*)(gemmi::Residue&, const std::__cxx11::basic_string&, char, gemmi::Element), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const pybind11::arg_v&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:56:24,465 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:24,466 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:56:24,467 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:56:24,838 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*]’: 2023-09-16T17:56:24,839 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:24,840 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-16T17:56:24,840 | ^~~~~~~~~~~~~~~~ 2023-09-16T17:56:24,841 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:25,024 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*]’: 2023-09-16T17:56:25,025 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:25,026 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:25,028 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*; bool _TrivialValueTypes = false]’, 2023-09-16T17:56:25,028 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:56:25,029 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*; _Tp = gemmi::TlsGroup]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:56:25,030 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::TlsGroup; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T17:56:25,030 inlined from ‘gemmi::RefinementInfo::RefinementInfo(const gemmi::RefinementInfo&)’ at include/gemmi/metadata.hpp:117:8, 2023-09-16T17:56:25,031 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = gemmi::RefinementInfo; _Args = {const gemmi::RefinementInfo&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-16T17:56:25,032 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21: 2023-09-16T17:56:25,032 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:25,033 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:56:25,034 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:56:25,259 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*]’: 2023-09-16T17:56:25,260 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:25,261 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-16T17:56:25,262 | ^~~~~~~~~~~~~~~~ 2023-09-16T17:56:25,263 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:25,385 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*; bool _TrivialValueTypes = false]’, 2023-09-16T17:56:25,386 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:56:25,386 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*; _Tp = gemmi::ExperimentInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:56:25,387 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::ExperimentInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T17:56:25,387 inlined from ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’ at include/gemmi/metadata.hpp:146:8: 2023-09-16T17:56:25,388 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:25,388 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:56:25,389 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:56:25,390 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*; bool _TrivialValueTypes = false]’, 2023-09-16T17:56:25,390 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:56:25,391 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*; _Tp = gemmi::CrystalInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:56:25,391 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::CrystalInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T17:56:25,392 inlined from ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’ at include/gemmi/metadata.hpp:146:8: 2023-09-16T17:56:25,393 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:25,393 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:56:25,394 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:56:25,395 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*; bool _TrivialValueTypes = false]’, 2023-09-16T17:56:25,395 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:56:25,395 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*; _Tp = gemmi::RefinementInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:56:25,396 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::RefinementInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T17:56:25,396 inlined from ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’ at include/gemmi/metadata.hpp:146:8: 2023-09-16T17:56:25,397 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:25,398 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:56:25,398 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:56:25,503 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*]’: 2023-09-16T17:56:25,503 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:25,504 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-16T17:56:25,505 | ^~~~~~~~~~~~~~~~ 2023-09-16T17:56:25,505 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:25,586 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; bool _TrivialValueTypes = false]’, 2023-09-16T17:56:25,587 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:56:25,587 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; _Tp = gemmi::Assembly::Operator]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:56:25,588 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-16T17:56:25,589 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-16T17:56:25,591 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:25,591 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:56:25,592 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:56:25,672 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; bool _TrivialValueTypes = false]’, 2023-09-16T17:56:25,673 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:56:25,673 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; _Tp = gemmi::Assembly::Operator]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:56:25,674 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T17:56:25,675 inlined from ‘gemmi::Assembly::Gen::Gen(const gemmi::Assembly::Gen&)’ at include/gemmi/metadata.hpp:312:10, 2023-09-16T17:56:25,675 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = gemmi::Assembly::Gen; _Args = {const gemmi::Assembly::Gen&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-16T17:56:25,676 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Gen*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21: 2023-09-16T17:56:25,676 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:25,677 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:56:25,678 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:56:25,814 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; bool _TrivialValueTypes = false]’, 2023-09-16T17:56:25,815 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:56:25,816 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; _Tp = gemmi::Assembly::Operator]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:56:25,817 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T17:56:25,818 inlined from ‘gemmi::Assembly::Gen::Gen(const gemmi::Assembly::Gen&)’ at include/gemmi/metadata.hpp:312:10, 2023-09-16T17:56:25,819 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = gemmi::Assembly::Gen; _Args = {gemmi::Assembly::Gen&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-16T17:56:25,820 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = gemmi::Assembly::Gen*; _ForwardIterator = gemmi::Assembly::Gen*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21, 2023-09-16T17:56:25,822 inlined from ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = gemmi::Assembly::Gen*; _ForwardIterator = gemmi::Assembly::Gen*; bool _TrivialValueTypes = false]’ at /usr/include/c++/12/bits/stl_uninitialized.h:137:32, 2023-09-16T17:56:25,823 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = gemmi::Assembly::Gen*; _ForwardIterator = gemmi::Assembly::Gen*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:56:25,825 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = gemmi::Assembly::Gen*; _ForwardIterator = gemmi::Assembly::Gen*; _Tp = gemmi::Assembly::Gen]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:56:25,826 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly::Gen; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:251:35: 2023-09-16T17:56:25,828 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:25,829 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:56:25,831 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:56:25,955 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*]’: 2023-09-16T17:56:25,955 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:25,956 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-16T17:56:25,957 | ^~~~~~~~~~~~~~~~ 2023-09-16T17:56:25,957 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:26,175 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; bool _TrivialValueTypes = false]’, 2023-09-16T17:56:26,176 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:56:26,177 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; _Tp = gemmi::Assembly]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:56:26,177 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-16T17:56:26,178 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-16T17:56:26,178 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:26,179 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:56:26,180 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:56:26,455 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*; bool _TrivialValueTypes = false]’, 2023-09-16T17:56:26,456 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:56:26,456 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*; _Tp = gemmi::NcsOp]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:56:26,457 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T17:56:26,457 inlined from ‘gemmi::Structure::Structure(const gemmi::Structure&)’ at include/gemmi/model.hpp:859:8: 2023-09-16T17:56:26,458 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:26,458 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:56:26,459 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:56:26,459 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*; bool _TrivialValueTypes = false]’, 2023-09-16T17:56:26,460 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:56:26,461 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*; _Tp = gemmi::Connection]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:56:26,461 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T17:56:26,462 inlined from ‘gemmi::Structure::Structure(const gemmi::Structure&)’ at include/gemmi/model.hpp:859:8: 2023-09-16T17:56:26,462 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:26,463 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:56:26,463 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:56:26,464 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; bool _TrivialValueTypes = false]’, 2023-09-16T17:56:26,464 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:56:26,465 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; _Tp = gemmi::Assembly]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:56:26,465 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T17:56:26,466 inlined from ‘gemmi::Structure::Structure(const gemmi::Structure&)’ at include/gemmi/model.hpp:859:8: 2023-09-16T17:56:26,467 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:26,467 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:56:26,468 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:56:26,642 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; bool _TrivialValueTypes = false]’, 2023-09-16T17:56:26,643 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:56:26,643 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; _Tp = gemmi::Assembly]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:56:26,644 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T17:56:26,644 inlined from ‘pybind11::detail::type_caster_base >::make_copy_constructor >(const std::vector*)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../detail/type_caster_base.h:1152:55, 2023-09-16T17:56:26,645 inlined from ‘static constexpr void* pybind11::detail::type_caster_base >::make_copy_constructor >(const std::vector*)::::_FUN(const void*)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../detail/type_caster_base.h:1152:16: 2023-09-16T17:56:26,645 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:56:26,646 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:56:26,646 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:56:28,063 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.3\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/monlib.cpp -o build/temp.linux-armv7l-cpython-311/python/monlib.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T17:57:14,927 In file included from /usr/include/c++/12/vector:70, 2023-09-16T17:57:14,928 from include/gemmi/monlib.hpp:12, 2023-09-16T17:57:14,928 from python/monlib.cpp:3: 2023-09-16T17:57:14,929 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Plane}; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’: 2023-09-16T17:57:14,930 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:57:14,930 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:57:14,931 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:57:15,031 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Plane}; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’, 2023-09-16T17:57:15,031 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-16T17:57:15,032 inlined from ‘gemmi::Restraints::Plane& gemmi::Restraints::get_or_add_plane(const std::string&)’ at include/gemmi/chemcomp.hpp:270:21: 2023-09-16T17:57:15,032 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:57:15,033 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T17:57:15,033 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:57:15,281 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Bond}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’: 2023-09-16T17:57:15,281 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:57:15,282 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:57:15,282 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:57:15,365 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Bond}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’: 2023-09-16T17:57:15,366 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:57:15,366 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T17:57:15,367 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:57:15,471 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Angle}; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’: 2023-09-16T17:57:15,471 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:57:15,472 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:57:15,473 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:57:15,570 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Angle}; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’: 2023-09-16T17:57:15,571 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:57:15,572 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T17:57:15,572 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:57:15,716 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Torsion}; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’: 2023-09-16T17:57:15,717 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:57:15,718 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:57:15,718 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:57:15,845 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Torsion}; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’: 2023-09-16T17:57:15,846 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:57:15,846 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T17:57:15,847 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:57:46,644 In file included from /usr/include/c++/12/vector:63: 2023-09-16T17:57:46,645 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Bond*]’: 2023-09-16T17:57:46,645 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:57:46,646 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-16T17:57:46,646 | ^~~~~~~~~~~~~~~~ 2023-09-16T17:57:46,647 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:57:46,747 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Bond*; bool _TrivialValueTypes = false]’, 2023-09-16T17:57:46,748 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Bond*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:57:46,748 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Bond*; _Tp = gemmi::Restraints::Bond]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:57:46,749 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-16T17:57:46,750 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-16T17:57:46,750 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:57:46,751 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:57:46,752 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:57:46,850 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*]’: 2023-09-16T17:57:46,851 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:57:46,851 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-16T17:57:46,852 | ^~~~~~~~~~~~~~~~ 2023-09-16T17:57:46,852 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:57:46,969 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*; bool _TrivialValueTypes = false]’, 2023-09-16T17:57:46,970 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:57:46,970 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*; _Tp = gemmi::Restraints::Angle]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:57:46,971 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-16T17:57:46,972 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-16T17:57:46,973 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:57:46,973 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:57:46,974 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:57:47,088 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*]’: 2023-09-16T17:57:47,089 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:57:47,090 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-16T17:57:47,091 | ^~~~~~~~~~~~~~~~ 2023-09-16T17:57:47,091 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:57:47,239 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*; bool _TrivialValueTypes = false]’, 2023-09-16T17:57:47,240 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:57:47,240 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*; _Tp = gemmi::Restraints::Torsion]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:57:47,241 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-16T17:57:47,241 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-16T17:57:47,242 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:57:47,243 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:57:47,243 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:57:48,199 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*]’: 2023-09-16T17:57:48,203 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:57:48,203 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-16T17:57:48,204 | ^~~~~~~~~~~~~~~~ 2023-09-16T17:57:48,205 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:57:48,280 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Bond*; bool _TrivialValueTypes = false]’, 2023-09-16T17:57:48,280 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Bond*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:57:48,281 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Bond*; _Tp = gemmi::Restraints::Bond]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:57:48,281 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T17:57:48,282 inlined from ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’ at include/gemmi/chemcomp.hpp:25:8: 2023-09-16T17:57:48,282 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:57:48,283 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:57:48,283 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:57:48,284 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*; bool _TrivialValueTypes = false]’, 2023-09-16T17:57:48,285 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:57:48,285 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*; _Tp = gemmi::Restraints::Angle]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:57:48,286 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T17:57:48,287 inlined from ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’ at include/gemmi/chemcomp.hpp:25:8: 2023-09-16T17:57:48,287 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:57:48,288 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:57:48,289 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:57:48,290 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*; bool _TrivialValueTypes = false]’, 2023-09-16T17:57:48,290 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:57:48,291 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*; _Tp = gemmi::Restraints::Torsion]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:57:48,292 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T17:57:48,292 inlined from ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’ at include/gemmi/chemcomp.hpp:25:8: 2023-09-16T17:57:48,293 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:57:48,293 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:57:48,294 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:57:48,295 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*; bool _TrivialValueTypes = false]’, 2023-09-16T17:57:48,296 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:57:48,296 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*; _Tp = gemmi::Restraints::Plane]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:57:48,297 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T17:57:48,298 inlined from ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’ at include/gemmi/chemcomp.hpp:25:8: 2023-09-16T17:57:48,298 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:57:48,299 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:57:48,300 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:57:51,449 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*; bool _TrivialValueTypes = false]’, 2023-09-16T17:57:51,453 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T17:57:51,454 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*; _Tp = gemmi::Restraints::Plane]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T17:57:51,454 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-16T17:57:51,455 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-16T17:57:51,456 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:57:51,456 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T17:57:51,457 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:57:53,867 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.3\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/mtz.cpp -o build/temp.linux-armv7l-cpython-311/python/mtz.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T17:58:48,674 In file included from /usr/include/c++/12/vector:70, 2023-09-16T17:58:48,674 from include/gemmi/mtz.hpp:17, 2023-09-16T17:58:48,675 from python/mtz.cpp:3: 2023-09-16T17:58:48,676 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Mat33, gemmi::Vec3}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-16T17:58:48,676 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:58:48,677 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:58:48,677 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:58:51,692 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Mat33, gemmi::Vec3}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-16T17:58:51,692 inlined from ‘void gemmi::UnitCell::set_cell_images_from_spacegroup(const gemmi::SpaceGroup*)’ at include/gemmi/unitcell.hpp:326:26: 2023-09-16T17:58:51,693 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:58:51,694 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T17:58:51,695 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:58:52,146 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::FTransform}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-16T17:58:52,146 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:58:52,147 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:58:52,147 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:58:52,245 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::FTransform}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-16T17:58:52,246 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::FTransform; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-16T17:58:52,246 inlined from ‘gemmi::UnitCell gemmi::UnitCell::changed_basis_backward(const gemmi::Op&, bool)’ at include/gemmi/unitcell.hpp:287:34: 2023-09-16T17:58:52,247 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:58:52,247 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T17:58:52,248 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:59:05,037 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Mtz::Dataset&}; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’: 2023-09-16T17:59:05,037 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:59:05,038 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:59:05,039 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:59:05,241 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’: 2023-09-16T17:59:05,242 /usr/include/c++/12/bits/vector.tcc:133:5: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-16T17:59:05,242 133 | vector<_Tp, _Alloc>:: 2023-09-16T17:59:05,243 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:59:05,244 /usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:59:05,245 164 | _M_realloc_insert(begin() + (__position - cbegin()), __x); 2023-09-16T17:59:05,246 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:59:05,662 /usr/include/c++/12/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’: 2023-09-16T17:59:05,662 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:59:05,663 739 | vector<_Tp, _Alloc>:: 2023-09-16T17:59:05,664 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:59:05,665 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:59:05,665 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:59:05,904 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’: 2023-09-16T17:59:05,904 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:59:05,905 175 | vector<_Tp, _Alloc>:: 2023-09-16T17:59:05,905 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:59:07,670 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’: 2023-09-16T17:59:07,671 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:59:07,672 439 | vector<_Tp, _Alloc>:: 2023-09-16T17:59:07,672 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T17:59:07,778 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’: 2023-09-16T17:59:07,779 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:59:07,779 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T17:59:07,780 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:59:15,791 In file included from python/common.h:3, 2023-09-16T17:59:15,791 from python/mtz.cpp:9: 2023-09-16T17:59:15,792 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access<__gnu_cxx::__normal_iterator >, gemmi::Mtz::Dataset&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Mtz::Dataset&; Extra = {}]’: 2023-09-16T17:59:15,793 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:59:15,794 2372 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) { 2023-09-16T17:59:15,794 | ^~~~~~~~~~~~~~~~~~ 2023-09-16T17:59:15,795 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:59:20,690 In file included from /usr/include/c++/12/vector:64: 2023-09-16T17:59:20,690 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-16T17:59:20,691 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-16T17:59:20,692 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:59:20,692 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:59:20,693 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:59:20,694 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:59:20,695 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:59:20,695 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:59:20,696 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:59:20,697 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-16T17:59:20,697 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-16T17:59:20,698 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:59:20,699 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:59:20,700 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:59:20,700 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:59:20,701 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:59:20,702 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:59:20,702 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:59:20,962 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-16T17:59:20,963 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-16T17:59:20,964 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:59:20,965 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-16T17:59:20,966 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:59:20,966 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:59:20,967 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:59:20,968 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:59:20,969 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:59:20,969 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-16T17:59:20,970 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-16T17:59:20,970 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:59:20,971 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-16T17:59:20,972 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:59:20,973 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:59:20,974 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:59:20,975 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:59:20,975 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:59:21,066 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-16T17:59:21,067 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-16T17:59:21,068 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Mtz::Dataset; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:59:21,068 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Mtz::Dataset; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:59:21,069 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Mtz::Dataset, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Mtz::Dataset (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17: 2023-09-16T17:59:21,070 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:59:21,071 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:59:21,071 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:59:21,072 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-16T17:59:21,073 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-16T17:59:21,073 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Mtz::Dataset; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:59:21,074 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Mtz::Dataset; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:59:21,075 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Mtz::Dataset, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Mtz::Dataset (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40: 2023-09-16T17:59:21,075 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:59:21,076 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:59:21,077 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:59:21,225 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-16T17:59:21,226 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-16T17:59:21,226 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-16T17:59:21,227 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:59:21,228 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:59:21,228 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:59:21,229 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:59:21,230 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:59:21,231 1779 | _M_range_insert(__pos, __first, __last, 2023-09-16T17:59:21,231 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:59:21,232 1780 | std::__iterator_category(__first)); 2023-09-16T17:59:21,232 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:59:21,233 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:59:21,233 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-16T17:59:21,234 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-16T17:59:21,234 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-16T17:59:21,235 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:59:21,236 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:59:21,237 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:59:21,237 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:59:21,238 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T17:59:21,239 1779 | _M_range_insert(__pos, __first, __last, 2023-09-16T17:59:21,240 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:59:21,240 1780 | std::__iterator_category(__first)); 2023-09-16T17:59:21,241 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:59:21,242 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:59:21,266 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-16T17:59:21,267 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-16T17:59:21,268 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Mtz::Dataset&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:59:21,268 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Mtz::Dataset&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:59:21,269 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Mtz::Dataset&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Mtz::Dataset&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:59:21,270 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Mtz::Dataset&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Mtz::Dataset&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:59:21,271 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:59:21,272 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:59:21,272 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:59:21,273 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-16T17:59:21,274 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-16T17:59:21,274 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Mtz::Dataset&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:59:21,275 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Mtz::Dataset&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:59:21,276 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Mtz::Dataset&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Mtz::Dataset&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:59:21,277 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Mtz::Dataset&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Mtz::Dataset&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:59:21,277 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:59:21,278 1287 | _M_realloc_insert(end(), __x); 2023-09-16T17:59:21,279 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T17:59:25,801 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Mtz::Dataset&; Extra = {}]’, 2023-09-16T17:59:25,802 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-16T17:59:25,802 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:59:25,803 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:59:25,804 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-16T17:59:25,805 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:59:25,805 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:59:25,807 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-16T17:59:25,807 | ^ 2023-09-16T17:59:25,808 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Mtz::Dataset&; Extra = {}]’, 2023-09-16T17:59:25,808 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-16T17:59:25,809 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-16T17:59:25,809 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-16T17:59:25,810 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-16T17:59:25,811 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:59:25,812 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:59:25,813 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-16T17:59:25,813 | ^ 2023-09-16T17:59:26,726 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-16T17:59:26,727 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-16T17:59:26,727 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:59:26,728 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:59:26,729 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:59:26,730 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:59:26,730 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:59:26,731 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:59:26,732 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:59:26,732 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-16T17:59:26,733 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-16T17:59:26,734 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:59:26,735 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:59:26,735 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:59:26,736 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:59:26,737 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T17:59:26,738 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-16T17:59:26,738 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T17:59:27,131 In file included from python/mtz.cpp:11: 2023-09-16T17:59:27,132 In lambda function, 2023-09-16T17:59:27,133 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Mtz::Dataset&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:59:27,133 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Mtz::Dataset&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:59:27,134 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Mtz::Dataset&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Mtz::Dataset&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T17:59:27,135 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Mtz::Dataset&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Mtz::Dataset&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:59:27,136 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-16T17:59:27,136 203 | v.insert(v.begin() + i, x); 2023-09-16T17:59:27,137 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-16T17:59:27,138 In lambda function, 2023-09-16T17:59:27,138 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Mtz::Dataset&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T17:59:27,139 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Mtz::Dataset&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T17:59:27,140 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Mtz::Dataset&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Mtz::Dataset&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T17:59:27,141 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Mtz::Dataset&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Mtz::Dataset&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T17:59:27,141 /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-16T17:59:27,142 203 | v.insert(v.begin() + i, x); 2023-09-16T17:59:27,143 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-16T17:59:41,097 In file included from include/gemmi/fourier.hpp:19, 2023-09-16T17:59:41,098 from python/mtz.cpp:5: 2023-09-16T17:59:41,098 In member function ‘pocketfft::detail::cmplx*)this)->pocketfft::detail::cmplx::r * other))> pocketfft::detail::cmplx::operator*(const T2&) const [with T2 = float; T = float]’, 2023-09-16T17:59:41,099 inlined from ‘void pocketfft::detail::fftblue::fft(pocketfft::detail::cmplx*, T0) const [with bool fwd = true; T = float; T0 = float]’ at include/gemmi/third_party/pocketfft_hdronly.h:2260:25: 2023-09-16T17:59:41,099 include/gemmi/third_party/pocketfft_hdronly.h:236:15: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::r’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-16T17:59:41,100 236 | { return {r*other, i*other}; } 2023-09-16T17:59:41,101 | ^ 2023-09-16T17:59:41,101 include/gemmi/third_party/pocketfft_hdronly.h:236:24: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::i’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-16T17:59:41,102 236 | { return {r*other, i*other}; } 2023-09-16T17:59:41,102 | ^ 2023-09-16T17:59:41,180 In member function ‘pocketfft::detail::cmplx*)this)->pocketfft::detail::cmplx::r * other))> pocketfft::detail::cmplx::operator*(const T2&) const [with T2 = float; T = float]’, 2023-09-16T17:59:41,181 inlined from ‘void pocketfft::detail::fftblue::fft(pocketfft::detail::cmplx*, T0) const [with bool fwd = false; T = float; T0 = float]’ at include/gemmi/third_party/pocketfft_hdronly.h:2260:25: 2023-09-16T17:59:41,182 include/gemmi/third_party/pocketfft_hdronly.h:236:15: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::r’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-16T17:59:41,182 236 | { return {r*other, i*other}; } 2023-09-16T17:59:41,183 | ^ 2023-09-16T17:59:41,184 include/gemmi/third_party/pocketfft_hdronly.h:236:24: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::i’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-16T17:59:41,185 236 | { return {r*other, i*other}; } 2023-09-16T17:59:41,185 | ^ 2023-09-16T17:59:45,468 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.3\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/read.cpp -o build/temp.linux-armv7l-cpython-311/python/read.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T18:00:34,515 In file included from /usr/include/c++/12/vector:70, 2023-09-16T18:00:34,516 from include/gemmi/iterator.hpp:10, 2023-09-16T18:00:34,517 from include/gemmi/cifdoc.hpp:8, 2023-09-16T18:00:34,517 from python/read.cpp:4: 2023-09-16T18:00:34,518 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Mat33, gemmi::Vec3}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-16T18:00:34,519 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:00:34,520 439 | vector<_Tp, _Alloc>:: 2023-09-16T18:00:34,520 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T18:00:34,575 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::FTransform&}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-16T18:00:34,576 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:00:34,632 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Transform}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-16T18:00:34,632 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:00:34,742 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::FTransform&}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-16T18:00:34,743 inlined from ‘void gemmi::UnitCell::add_ncs_images_to_cs_images(const std::vector&)’ at include/gemmi/unitcell.hpp:336:28: 2023-09-16T18:00:34,743 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:00:34,744 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T18:00:34,745 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:00:34,745 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Transform}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-16T18:00:34,746 inlined from ‘void gemmi::UnitCell::add_ncs_images_to_cs_images(const std::vector&)’ at include/gemmi/unitcell.hpp:338:30: 2023-09-16T18:00:34,747 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:00:34,747 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T18:00:34,748 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:00:34,863 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::SmallStructure::AtomType&}; _Tp = gemmi::SmallStructure::AtomType; _Alloc = std::allocator]’: 2023-09-16T18:00:34,864 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:00:34,864 439 | vector<_Tp, _Alloc>:: 2023-09-16T18:00:34,865 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T18:00:35,716 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::TlsGroup; _Alloc = std::allocator]’: 2023-09-16T18:00:35,717 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:00:35,923 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::BasicRefinementInfo; _Alloc = std::allocator]’: 2023-09-16T18:00:35,924 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:00:36,043 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::CrystalInfo; _Alloc = std::allocator]’: 2023-09-16T18:00:36,044 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:00:36,120 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::CrystalInfo; _Alloc = std::allocator]’: 2023-09-16T18:00:36,121 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:00:36,122 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T18:00:36,122 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:00:36,369 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::DiffractionInfo; _Alloc = std::allocator]’: 2023-09-16T18:00:36,369 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:00:36,370 439 | vector<_Tp, _Alloc>:: 2023-09-16T18:00:36,370 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T18:00:36,588 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::DiffractionInfo; _Alloc = std::allocator]’: 2023-09-16T18:00:36,589 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:00:36,589 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T18:00:36,590 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:00:36,663 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::ExperimentInfo; _Alloc = std::allocator]’: 2023-09-16T18:00:36,664 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:00:36,664 439 | vector<_Tp, _Alloc>:: 2023-09-16T18:00:36,665 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T18:00:36,738 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::ExperimentInfo; _Alloc = std::allocator]’: 2023-09-16T18:00:36,738 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:00:36,739 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T18:00:36,740 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:00:36,773 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::ReflectionsInfo; _Alloc = std::allocator]’: 2023-09-16T18:00:36,774 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:00:36,775 439 | vector<_Tp, _Alloc>:: 2023-09-16T18:00:36,775 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T18:00:37,678 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’: 2023-09-16T18:00:37,679 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:00:37,741 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’: 2023-09-16T18:00:37,741 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:00:37,742 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T18:00:37,742 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:00:38,098 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Atom&}; _Tp = gemmi::Atom; _Alloc = std::allocator]’: 2023-09-16T18:00:38,099 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:00:38,100 439 | vector<_Tp, _Alloc>:: 2023-09-16T18:00:38,100 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T18:00:38,183 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Atom&}; _Tp = gemmi::Atom; _Alloc = std::allocator]’: 2023-09-16T18:00:38,183 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:00:38,184 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T18:00:38,185 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:00:40,113 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Mat33, gemmi::Vec3}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-16T18:00:40,114 inlined from ‘void gemmi::UnitCell::set_cell_images_from_spacegroup(const gemmi::SpaceGroup*)’ at include/gemmi/unitcell.hpp:326:26: 2023-09-16T18:00:40,114 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:00:40,115 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T18:00:40,116 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:00:40,780 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Connection&}; _Tp = gemmi::Connection; _Alloc = std::allocator]’: 2023-09-16T18:00:40,781 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:00:40,782 439 | vector<_Tp, _Alloc>:: 2023-09-16T18:00:40,783 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T18:00:40,997 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Connection&}; _Tp = gemmi::Connection; _Alloc = std::allocator]’: 2023-09-16T18:00:40,998 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:00:40,998 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T18:00:40,999 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:00:41,482 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >}; _Tp = gemmi::Assembly; _Alloc = std::allocator]’: 2023-09-16T18:00:41,482 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:00:41,483 439 | vector<_Tp, _Alloc>:: 2023-09-16T18:00:41,483 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T18:00:41,565 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >}; _Tp = gemmi::Assembly; _Alloc = std::allocator]’: 2023-09-16T18:00:41,565 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:00:41,566 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T18:00:41,566 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:00:41,736 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::NcsOp}; _Tp = gemmi::NcsOp; _Alloc = std::allocator]’: 2023-09-16T18:00:41,737 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:00:41,737 439 | vector<_Tp, _Alloc>:: 2023-09-16T18:00:41,738 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T18:00:41,785 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::NcsOp}; _Tp = gemmi::NcsOp; _Alloc = std::allocator]’: 2023-09-16T18:00:41,786 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:00:41,786 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T18:00:41,787 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:00:45,273 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::ReflectionsInfo; _Alloc = std::allocator]’, 2023-09-16T18:00:45,274 inlined from ‘void gemmi::pdb_impl::read_remark_200_230_240(const char*, gemmi::Metadata&, std::string*&)’ at include/gemmi/remarks.hpp:452:52: 2023-09-16T18:00:45,274 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:00:45,275 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T18:00:45,276 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:00:46,785 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::SmallStructure::Site&}; _Tp = gemmi::SmallStructure::Site; _Alloc = std::allocator]’: 2023-09-16T18:00:46,786 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:00:46,786 439 | vector<_Tp, _Alloc>:: 2023-09-16T18:00:46,787 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T18:00:47,000 In file included from /usr/include/c++/12/vector:64: 2023-09-16T18:00:47,000 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::SmallStructure::Site; _Alloc = std::allocator]’, 2023-09-16T18:00:47,001 inlined from ‘std::vector gemmi::SmallStructure::get_all_unit_cell_sites() const’ at include/gemmi/small.hpp:123:18: 2023-09-16T18:00:47,001 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:00:47,002 1287 | _M_realloc_insert(end(), __x); 2023-09-16T18:00:47,002 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T18:00:47,004 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::SmallStructure::Site; _Alloc = std::allocator]’, 2023-09-16T18:00:47,005 inlined from ‘std::vector gemmi::SmallStructure::get_all_unit_cell_sites() const’ at include/gemmi/small.hpp:130:20: 2023-09-16T18:00:47,006 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:00:47,006 1287 | _M_realloc_insert(end(), __x); 2023-09-16T18:00:47,007 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T18:00:49,717 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::RefinementInfo; _Alloc = std::allocator]’: 2023-09-16T18:00:49,717 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:00:49,717 439 | vector<_Tp, _Alloc>:: 2023-09-16T18:00:49,718 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T18:00:49,854 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::RefinementInfo; _Alloc = std::allocator]’: 2023-09-16T18:00:49,855 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:00:49,856 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T18:00:49,856 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:00:50,472 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Assembly::Operator&}; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’: 2023-09-16T18:00:50,472 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:00:50,473 439 | vector<_Tp, _Alloc>:: 2023-09-16T18:00:50,474 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T18:00:58,652 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const char*&}; _Tp = gemmi::RefinementInfo::Restr; _Alloc = std::allocator]’: 2023-09-16T18:00:59,619 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:00:59,746 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {const char*&}; _Tp = gemmi::RefinementInfo::Restr; _Alloc = std::allocator]’, 2023-09-16T18:00:59,891 inlined from ‘void gemmi::pdb_impl::add_restraint_count_weight(gemmi::RefinementInfo&, const char*, const char*)’ at include/gemmi/remarks.hpp:94:36: 2023-09-16T18:00:59,895 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:00:59,897 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T18:00:59,898 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:00:59,899 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const std::__cxx11::basic_string, std::allocator >&}; _Tp = gemmi::RefinementInfo::Restr; _Alloc = std::allocator]’: 2023-09-16T18:00:59,900 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:00:59,945 439 | vector<_Tp, _Alloc>:: 2023-09-16T18:01:00,024 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T18:01:00,197 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {const std::__cxx11::basic_string, std::allocator >&}; _Tp = gemmi::RefinementInfo::Restr; _Alloc = std::allocator]’, 2023-09-16T18:01:00,366 inlined from ‘T& gemmi::impl::find_or_add(std::vector&, const std::string&) [with T = gemmi::RefinementInfo::Restr]’ at include/gemmi/model.hpp:42:19, 2023-09-16T18:01:00,563 inlined from ‘T& gemmi::impl::find_or_add(std::vector&, const std::string&) [with T = gemmi::RefinementInfo::Restr]’ at include/gemmi/model.hpp:39:4: 2023-09-16T18:01:00,614 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:01:00,615 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T18:01:00,617 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:01:00,618 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::TlsGroup; _Alloc = std::allocator]’, 2023-09-16T18:01:00,619 inlined from ‘void gemmi::pdb_impl::read_remark3_line(const char*, gemmi::Metadata&, std::string*&)’ at include/gemmi/remarks.hpp:257:39: 2023-09-16T18:01:00,620 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:01:00,632 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T18:01:00,676 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:01:00,725 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::BasicRefinementInfo; _Alloc = std::allocator]’, 2023-09-16T18:01:00,845 inlined from ‘void gemmi::pdb_impl::read_remark3_line(const char*, gemmi::Metadata&, std::string*&)’ at include/gemmi/remarks.hpp:317:49: 2023-09-16T18:01:00,865 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:01:01,011 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T18:01:01,135 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:01:02,411 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Connection&}; _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-16T18:01:02,412 inlined from ‘void gemmi::impl::read_connectivity(gemmi::cif::Block&, gemmi::Structure&)’ at include/gemmi/mmcif.hpp:240:32: 2023-09-16T18:01:02,413 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:01:02,413 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T18:01:02,414 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:01:03,492 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::SmallStructure::Site; _Alloc = std::allocator]’, 2023-09-16T18:01:03,493 inlined from ‘gemmi::SmallStructure gemmi::make_small_structure_from_block(const cif::Block&)’ at include/gemmi/smcif.hpp:75:23: 2023-09-16T18:01:03,494 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:01:03,494 1287 | _M_realloc_insert(end(), __x); 2023-09-16T18:01:03,495 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T18:01:03,499 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::SmallStructure::AtomType; _Alloc = std::allocator]’, 2023-09-16T18:01:03,499 inlined from ‘gemmi::SmallStructure gemmi::make_small_structure_from_block(const cif::Block&)’ at include/gemmi/smcif.hpp:107:28: 2023-09-16T18:01:03,500 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:01:03,501 1287 | _M_realloc_insert(end(), __x); 2023-09-16T18:01:03,502 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T18:01:04,850 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-16T18:01:04,850 inlined from ‘std::vector gemmi::impl::read_assemblies(gemmi::cif::Block&)’ at include/gemmi/mmcif.hpp:335:36: 2023-09-16T18:01:04,851 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:01:04,852 1287 | _M_realloc_insert(end(), __x); 2023-09-16T18:01:04,852 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T18:01:05,589 In file included from /usr/include/c++/12/vector:63: 2023-09-16T18:01:05,590 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*]’: 2023-09-16T18:01:05,591 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:01:05,592 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-16T18:01:05,592 | ^~~~~~~~~~~~~~~~ 2023-09-16T18:01:05,593 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:01:11,103 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::SmallStructure::Site; _Alloc = std::allocator]’, 2023-09-16T18:01:11,103 inlined from ‘add_small(pybind11::module&)::’ at python/read.cpp:141:29, 2023-09-16T18:01:11,104 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = add_small(pybind11::module&)::&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {gemmi::SmallStructure&, const gemmi::SmallStructure::Site&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T18:01:11,104 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = add_small(pybind11::module&)::&; Args = {gemmi::SmallStructure&, const gemmi::SmallStructure::Site&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T18:01:11,105 inlined from ‘pybind11::cpp_function::initialize, void, gemmi::SmallStructure&, const gemmi::SmallStructure::Site&, pybind11::name, pybind11::is_method, pybind11::sibling>(add_small(pybind11::module&)::&&, void (*)(gemmi::SmallStructure&, const gemmi::SmallStructure::Site&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-16T18:01:11,106 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, void, gemmi::SmallStructure&, const gemmi::SmallStructure::Site&, pybind11::name, pybind11::is_method, pybind11::sibling>(add_small(pybind11::module&)::&&, void (*)(gemmi::SmallStructure&, const gemmi::SmallStructure::Site&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T18:01:11,106 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:01:11,107 1287 | _M_realloc_insert(end(), __x); 2023-09-16T18:01:11,108 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T18:01:11,108 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::SmallStructure::Site; _Alloc = std::allocator]’, 2023-09-16T18:01:11,109 inlined from ‘add_small(pybind11::module&)::’ at python/read.cpp:141:29, 2023-09-16T18:01:11,109 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = add_small(pybind11::module&)::&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {gemmi::SmallStructure&, const gemmi::SmallStructure::Site&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-16T18:01:11,110 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = add_small(pybind11::module&)::&; Args = {gemmi::SmallStructure&, const gemmi::SmallStructure::Site&}]’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-16T18:01:11,110 inlined from ‘pybind11::cpp_function::initialize, void, gemmi::SmallStructure&, const gemmi::SmallStructure::Site&, pybind11::name, pybind11::is_method, pybind11::sibling>(add_small(pybind11::module&)::&&, void (*)(gemmi::SmallStructure&, const gemmi::SmallStructure::Site&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&)::’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-16T18:01:11,111 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, void, gemmi::SmallStructure&, const gemmi::SmallStructure::Site&, pybind11::name, pybind11::is_method, pybind11::sibling>(add_small(pybind11::module&)::&&, void (*)(gemmi::SmallStructure&, const gemmi::SmallStructure::Site&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-16T18:01:11,112 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:01:11,112 1287 | _M_realloc_insert(end(), __x); 2023-09-16T18:01:11,113 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T18:01:17,155 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*]’: 2023-09-16T18:01:17,156 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:01:17,157 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-16T18:01:17,157 | ^~~~~~~~~~~~~~~~ 2023-09-16T18:01:17,158 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:01:17,250 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*]’: 2023-09-16T18:01:17,251 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:01:17,251 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:01:17,405 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*]’: 2023-09-16T18:01:17,406 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:01:17,407 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:01:17,408 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*; bool _TrivialValueTypes = false]’, 2023-09-16T18:01:17,409 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T18:01:17,410 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*; _Tp = gemmi::TlsGroup]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T18:01:17,410 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::TlsGroup; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T18:01:17,411 inlined from ‘gemmi::RefinementInfo::RefinementInfo(const gemmi::RefinementInfo&)’ at include/gemmi/metadata.hpp:117:8, 2023-09-16T18:01:17,412 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = gemmi::RefinementInfo; _Args = {const gemmi::RefinementInfo&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-16T18:01:17,412 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21: 2023-09-16T18:01:17,413 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:01:17,414 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T18:01:17,414 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:01:17,614 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*]’: 2023-09-16T18:01:17,615 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:01:17,615 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-16T18:01:17,616 | ^~~~~~~~~~~~~~~~ 2023-09-16T18:01:17,616 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:01:17,742 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*; bool _TrivialValueTypes = false]’, 2023-09-16T18:01:17,743 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T18:01:17,744 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*; _Tp = gemmi::ExperimentInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T18:01:17,744 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::ExperimentInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T18:01:17,745 inlined from ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’ at include/gemmi/metadata.hpp:146:8: 2023-09-16T18:01:17,746 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:01:17,746 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T18:01:17,747 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:01:17,748 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*; bool _TrivialValueTypes = false]’, 2023-09-16T18:01:17,749 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T18:01:17,750 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*; _Tp = gemmi::CrystalInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T18:01:17,750 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::CrystalInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T18:01:17,751 inlined from ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’ at include/gemmi/metadata.hpp:146:8: 2023-09-16T18:01:17,751 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:01:17,752 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T18:01:17,752 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:01:17,753 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*; bool _TrivialValueTypes = false]’, 2023-09-16T18:01:17,753 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T18:01:17,754 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*; _Tp = gemmi::RefinementInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T18:01:17,754 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::RefinementInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T18:01:17,755 inlined from ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’ at include/gemmi/metadata.hpp:146:8: 2023-09-16T18:01:17,756 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:01:17,756 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T18:01:17,757 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:01:17,997 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; bool _TrivialValueTypes = false]’, 2023-09-16T18:01:17,998 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T18:01:17,998 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; _Tp = gemmi::Assembly]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T18:01:17,999 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T18:01:18,000 inlined from ‘gemmi::Structure::Structure(const gemmi::Structure&)’ at include/gemmi/model.hpp:859:8: 2023-09-16T18:01:18,000 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:01:18,001 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T18:01:18,002 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:01:24,574 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.3\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/recgrid.cpp -o build/temp.linux-armv7l-cpython-311/python/recgrid.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T18:02:11,264 In file included from /usr/include/c++/12/vector:70, 2023-09-16T18:02:11,265 from include/gemmi/unitcell.hpp:10, 2023-09-16T18:02:11,265 from include/gemmi/asudata.hpp:11, 2023-09-16T18:02:11,266 from include/gemmi/recgrid.hpp:8, 2023-09-16T18:02:11,267 from python/recgrid.cpp:3: 2023-09-16T18:02:11,267 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Mat33, gemmi::Vec3}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-16T18:02:11,268 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:02:11,269 439 | vector<_Tp, _Alloc>:: 2023-09-16T18:02:11,270 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T18:02:11,371 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Mat33, gemmi::Vec3}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-16T18:02:11,372 inlined from ‘void gemmi::UnitCell::set_cell_images_from_spacegroup(const gemmi::SpaceGroup*)’ at include/gemmi/unitcell.hpp:326:26: 2023-09-16T18:02:11,373 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:02:11,373 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T18:02:11,374 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:02:49,541 In file included from include/gemmi/fourier.hpp:19, 2023-09-16T18:02:49,541 from python/recgrid.cpp:4: 2023-09-16T18:02:49,542 In member function ‘pocketfft::detail::cmplx*)this)->pocketfft::detail::cmplx::r * other))> pocketfft::detail::cmplx::operator*(const T2&) const [with T2 = float; T = float]’, 2023-09-16T18:02:49,543 inlined from ‘void pocketfft::detail::fftblue::fft(pocketfft::detail::cmplx*, T0) const [with bool fwd = true; T = float; T0 = float]’ at include/gemmi/third_party/pocketfft_hdronly.h:2260:25: 2023-09-16T18:02:49,543 include/gemmi/third_party/pocketfft_hdronly.h:236:15: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::r’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-16T18:02:49,545 236 | { return {r*other, i*other}; } 2023-09-16T18:02:49,545 | ^ 2023-09-16T18:02:49,546 include/gemmi/third_party/pocketfft_hdronly.h:236:24: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::i’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-16T18:02:49,546 236 | { return {r*other, i*other}; } 2023-09-16T18:02:49,547 | ^ 2023-09-16T18:02:49,623 In member function ‘pocketfft::detail::cmplx*)this)->pocketfft::detail::cmplx::r * other))> pocketfft::detail::cmplx::operator*(const T2&) const [with T2 = float; T = float]’, 2023-09-16T18:02:49,623 inlined from ‘void pocketfft::detail::fftblue::fft(pocketfft::detail::cmplx*, T0) const [with bool fwd = false; T = float; T0 = float]’ at include/gemmi/third_party/pocketfft_hdronly.h:2260:25: 2023-09-16T18:02:49,624 include/gemmi/third_party/pocketfft_hdronly.h:236:15: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::r’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-16T18:02:49,625 236 | { return {r*other, i*other}; } 2023-09-16T18:02:49,625 | ^ 2023-09-16T18:02:49,626 include/gemmi/third_party/pocketfft_hdronly.h:236:24: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::i’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-16T18:02:49,627 236 | { return {r*other, i*other}; } 2023-09-16T18:02:49,627 | ^ 2023-09-16T18:02:52,759 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.3\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/scaling.cpp -o build/temp.linux-armv7l-cpython-311/python/scaling.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T18:03:09,264 In file included from /usr/include/c++/12/vector:70, 2023-09-16T18:03:09,264 from /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../detail/common.h:314, 2023-09-16T18:03:09,265 from /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../attr.h:13, 2023-09-16T18:03:09,266 from /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/class.h:12, 2023-09-16T18:03:09,266 from /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:13, 2023-09-16T18:03:09,267 from python/common.h:3, 2023-09-16T18:03:09,268 from python/scaling.cpp:3: 2023-09-16T18:03:09,268 /usr/include/c++/12/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = const double*; _Tp = double; _Alloc = std::allocator]’: 2023-09-16T18:03:09,269 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:03:09,269 739 | vector<_Tp, _Alloc>:: 2023-09-16T18:03:09,270 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T18:03:19,535 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Scaling::Point}; _Tp = gemmi::Scaling::Point; _Alloc = std::allocator::Point>]’: 2023-09-16T18:03:19,536 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::Point, std::allocator::Point> >::iterator’ changed in GCC 7.1 2023-09-16T18:03:19,536 439 | vector<_Tp, _Alloc>:: 2023-09-16T18:03:19,537 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T18:03:19,608 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Scaling::Point}; _Tp = gemmi::Scaling::Point; _Alloc = std::allocator::Point>]’, 2023-09-16T18:03:19,609 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Scaling::Point; _Alloc = std::allocator::Point>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-16T18:03:19,610 inlined from ‘void gemmi::Scaling::prepare_points(const gemmi::AsuData >&, const gemmi::AsuData >&, const gemmi::AsuData >&) [with Real = float]’ at include/gemmi/scaling.hpp:199:23: 2023-09-16T18:03:19,610 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Point*, std::vector::Point, std::allocator::Point> > >’ changed in GCC 7.1 2023-09-16T18:03:19,611 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T18:03:19,611 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:03:21,088 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2023-09-16T18:03:21,088 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:03:21,089 439 | vector<_Tp, _Alloc>:: 2023-09-16T18:03:21,090 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T18:03:21,133 In file included from /usr/include/c++/12/vector:64: 2023-09-16T18:03:21,133 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-16T18:03:21,134 inlined from ‘std::vector gemmi::Scaling::get_parameters() const [with Real = float]’ at include/gemmi/scaling.hpp:110:18: 2023-09-16T18:03:21,135 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:03:21,135 1287 | _M_realloc_insert(end(), __x); 2023-09-16T18:03:21,136 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T18:03:21,137 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-16T18:03:21,137 inlined from ‘std::vector gemmi::Scaling::get_parameters() const [with Real = float]’ at include/gemmi/scaling.hpp:113:22: 2023-09-16T18:03:21,138 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:03:21,139 1287 | _M_realloc_insert(end(), __x); 2023-09-16T18:03:21,139 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T18:03:21,140 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-16T18:03:21,141 inlined from ‘std::vector gemmi::Scaling::get_parameters() const [with Real = float]’ at include/gemmi/scaling.hpp:115:22: 2023-09-16T18:03:21,142 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:03:21,142 1287 | _M_realloc_insert(end(), __x); 2023-09-16T18:03:21,143 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T18:03:21,143 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, std::initializer_list<_Tp>) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-16T18:03:21,143 inlined from ‘std::vector gemmi::Scaling::get_parameters() const [with Real = float]’ at include/gemmi/scaling.hpp:119:19: 2023-09-16T18:03:21,144 /usr/include/c++/12/bits/stl_vector.h:1409:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:03:21,144 1409 | _M_range_insert(begin() + __offset, __l.begin(), __l.end(), 2023-09-16T18:03:21,145 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:03:21,145 1410 | std::random_access_iterator_tag()); 2023-09-16T18:03:21,146 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:03:21,146 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, std::initializer_list<_Tp>) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-16T18:03:21,147 inlined from ‘std::vector gemmi::Scaling::get_parameters() const [with Real = float]’ at include/gemmi/scaling.hpp:123:19: 2023-09-16T18:03:21,147 /usr/include/c++/12/bits/stl_vector.h:1409:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:03:21,148 1409 | _M_range_insert(begin() + __offset, __l.begin(), __l.end(), 2023-09-16T18:03:21,148 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:03:21,149 1410 | std::random_access_iterator_tag()); 2023-09-16T18:03:21,150 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:03:21,150 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, std::initializer_list<_Tp>) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-16T18:03:21,151 inlined from ‘std::vector gemmi::Scaling::get_parameters() const [with Real = float]’ at include/gemmi/scaling.hpp:127:19: 2023-09-16T18:03:21,152 /usr/include/c++/12/bits/stl_vector.h:1409:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:03:21,152 1409 | _M_range_insert(begin() + __offset, __l.begin(), __l.end(), 2023-09-16T18:03:21,153 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:03:21,153 1410 | std::random_access_iterator_tag()); 2023-09-16T18:03:21,154 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:03:21,155 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, std::initializer_list<_Tp>) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-16T18:03:21,155 inlined from ‘std::vector gemmi::Scaling::get_parameters() const [with Real = float]’ at include/gemmi/scaling.hpp:130:19: 2023-09-16T18:03:21,156 /usr/include/c++/12/bits/stl_vector.h:1409:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:03:21,157 1409 | _M_range_insert(begin() + __offset, __l.begin(), __l.end(), 2023-09-16T18:03:21,157 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:03:21,158 1410 | std::random_access_iterator_tag()); 2023-09-16T18:03:21,158 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:03:21,159 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, std::initializer_list<_Tp>) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-16T18:03:21,159 inlined from ‘std::vector gemmi::Scaling::get_parameters() const [with Real = float]’ at include/gemmi/scaling.hpp:133:19: 2023-09-16T18:03:21,160 /usr/include/c++/12/bits/stl_vector.h:1409:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:03:21,160 1409 | _M_range_insert(begin() + __offset, __l.begin(), __l.end(), 2023-09-16T18:03:21,161 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:03:21,161 1410 | std::random_access_iterator_tag()); 2023-09-16T18:03:21,162 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:03:21,162 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, std::initializer_list<_Tp>) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-16T18:03:21,162 inlined from ‘std::vector gemmi::Scaling::get_parameters() const [with Real = float]’ at include/gemmi/scaling.hpp:136:19: 2023-09-16T18:03:21,163 /usr/include/c++/12/bits/stl_vector.h:1409:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:03:21,163 1409 | _M_range_insert(begin() + __offset, __l.begin(), __l.end(), 2023-09-16T18:03:21,164 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:03:21,165 1410 | std::random_access_iterator_tag()); 2023-09-16T18:03:21,165 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:03:21,166 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-16T18:03:21,167 inlined from ‘std::vector gemmi::Scaling::get_parameters() const [with Real = float]’ at include/gemmi/scaling.hpp:139:22: 2023-09-16T18:03:21,167 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:03:21,168 1287 | _M_realloc_insert(end(), __x); 2023-09-16T18:03:21,169 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T18:03:23,782 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.3\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/search.cpp -o build/temp.linux-armv7l-cpython-311/python/search.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T18:04:03,956 In file included from /usr/include/c++/12/vector:70, 2023-09-16T18:04:03,956 from include/gemmi/neighbor.hpp:9, 2023-09-16T18:04:03,957 from python/search.cpp:3: 2023-09-16T18:04:03,958 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Transform&}; _Tp = gemmi::Transform; _Alloc = std::allocator]’: 2023-09-16T18:04:03,960 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:04:03,961 439 | vector<_Tp, _Alloc>:: 2023-09-16T18:04:03,963 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T18:04:04,065 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Fractional&}; _Tp = gemmi::Fractional; _Alloc = std::allocator]’: 2023-09-16T18:04:04,107 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:04:04,235 In file included from /usr/include/c++/12/vector:64: 2023-09-16T18:04:04,259 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Fractional; _Alloc = std::allocator]’, 2023-09-16T18:04:04,260 inlined from ‘void gemmi::NeighborSearch::add_site(const gemmi::SmallStructure::Site&, int)’ at include/gemmi/neighbor.hpp:290:21: 2023-09-16T18:04:04,260 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:04:04,261 1287 | _M_realloc_insert(end(), __x); 2023-09-16T18:04:04,262 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T18:04:06,095 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::FTransform}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-16T18:04:07,915 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:04:07,920 439 | vector<_Tp, _Alloc>:: 2023-09-16T18:04:08,008 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T18:04:11,486 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Transform; _Alloc = std::allocator]’, 2023-09-16T18:04:11,600 inlined from ‘void gemmi::NeighborSearch::initialize(gemmi::Model&, const gemmi::UnitCell&, double)’ at include/gemmi/neighbor.hpp:188:20: 2023-09-16T18:04:11,710 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:04:11,840 1287 | _M_realloc_insert(end(), __x); 2023-09-16T18:04:11,867 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T18:04:11,954 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::FTransform}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-16T18:04:11,956 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::FTransform; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-16T18:04:11,956 inlined from ‘void gemmi::NeighborSearch::initialize(gemmi::Model&, const gemmi::UnitCell&, double)’ at include/gemmi/neighbor.hpp:201:25: 2023-09-16T18:04:12,027 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:04:12,151 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T18:04:12,152 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:04:30,813 In file included from /usr/include/c++/12/vector:63: 2023-09-16T18:04:30,814 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*]’: 2023-09-16T18:04:30,815 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:04:30,815 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-16T18:04:30,816 | ^~~~~~~~~~~~~~~~ 2023-09-16T18:04:30,816 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:04:30,906 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*]’: 2023-09-16T18:04:30,907 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:04:30,908 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:04:31,097 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*]’: 2023-09-16T18:04:31,097 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:04:31,098 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:04:31,224 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*; bool _TrivialValueTypes = false]’, 2023-09-16T18:04:31,225 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T18:04:31,225 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*; _Tp = gemmi::Restraints::Angle]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T18:04:31,226 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T18:04:31,227 inlined from ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’ at include/gemmi/chemcomp.hpp:25:8: 2023-09-16T18:04:31,227 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:04:31,228 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T18:04:31,229 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:04:31,229 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*; bool _TrivialValueTypes = false]’, 2023-09-16T18:04:31,230 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T18:04:31,230 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*; _Tp = gemmi::Restraints::Torsion]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T18:04:31,231 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T18:04:31,231 inlined from ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’ at include/gemmi/chemcomp.hpp:25:8: 2023-09-16T18:04:31,232 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:04:31,233 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T18:04:31,233 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:04:31,234 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*; bool _TrivialValueTypes = false]’, 2023-09-16T18:04:31,235 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T18:04:31,236 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*; _Tp = gemmi::Restraints::Plane]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T18:04:31,236 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T18:04:31,237 inlined from ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’ at include/gemmi/chemcomp.hpp:25:8: 2023-09-16T18:04:31,237 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:04:31,238 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T18:04:31,239 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:04:32,042 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.3\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/sf.cpp -o build/temp.linux-armv7l-cpython-311/python/sf.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T18:04:44,567 In file included from include/gemmi/it92.hpp:16, 2023-09-16T18:04:44,568 from python/sf.cpp:6: 2023-09-16T18:04:44,569 include/gemmi/formfact.hpp: In instantiation of ‘std::pair<_ForwardIterator, _ForwardIterator> gemmi::ExpSum::calculate_with_derivative(Real) const [with int N = 5; Real = double]’: 2023-09-16T18:04:44,569 include/gemmi/dencalc.hpp:19:54: required from ‘double gemmi::determine_cutoff_radius(double, const PrecalExpSum&, double) [with PrecalExpSum = ExpSum<5, double>]’ 2023-09-16T18:04:44,570 include/gemmi/dencalc.hpp:121:35: required from ‘double gemmi::DensityCalculator::estimate_radius(const gemmi::ExpSum&, double) const [with int N = 5; Table = gemmi::IT92; Real = float; typename Table::Coef::coef_type = double; typename Table::Coef = gemmi::GaussianCoef<4, 1, double>]’ 2023-09-16T18:04:44,570 python/sf.cpp:63:36: required from ‘void add_dencalc(pybind11::module&, const char*) [with Table = gemmi::IT92; pybind11::module = pybind11::module_]’ 2023-09-16T18:04:44,571 python/sf.cpp:86:20: required from here 2023-09-16T18:04:44,571 include/gemmi/formfact.hpp:28:24: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 2023-09-16T18:04:44,572 28 | std::pair calculate_with_derivative(Real r) const { 2023-09-16T18:04:44,573 | ^~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:05:13,996 In file included from /usr/include/c++/12/functional:64, 2023-09-16T18:05:13,997 from /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:21, 2023-09-16T18:05:13,997 from /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../attr.h:14, 2023-09-16T18:05:13,998 from /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/class.h:12, 2023-09-16T18:05:13,999 from /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:13, 2023-09-16T18:05:13,999 from python/common.h:3, 2023-09-16T18:05:14,000 from python/sf.cpp:3: 2023-09-16T18:05:14,001 In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = gemmi::impl_fprim::Point*; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, 2023-09-16T18:05:14,001 inlined from ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = gemmi::impl_fprim::Point*; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/12/bits/stl_algo.h:1844:5, 2023-09-16T18:05:14,002 inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = gemmi::impl_fprim::Point*; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/12/bits/stl_algo.h:1940:31, 2023-09-16T18:05:14,003 inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = gemmi::impl_fprim::Point*; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/12/bits/stl_algo.h:1932:5, 2023-09-16T18:05:14,004 inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = gemmi::impl_fprim::Point*]’ at /usr/include/c++/12/bits/stl_algo.h:4820:18, 2023-09-16T18:05:14,005 inlined from ‘void gemmi::impl_fprim::cromer(int, double, int, const OrbitalCoef*, double*, double*)’ at include/gemmi/fprime.hpp:161:14: 2023-09-16T18:05:14,005 /usr/include/c++/12/bits/stl_algo.h:1849:32: warning: array subscript 16 is outside array bounds of ‘gemmi::impl_fprim::Point [11]’ [-Warray-bounds] 2023-09-16T18:05:14,006 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); 2023-09-16T18:05:14,006 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:05:14,007 In file included from python/sf.cpp:11: 2023-09-16T18:05:14,008 include/gemmi/fprime.hpp: In function ‘void gemmi::impl_fprim::cromer(int, double, int, const OrbitalCoef*, double*, double*)’: 2023-09-16T18:05:14,008 include/gemmi/fprime.hpp:153:11: note: at offset 256 into object ‘lndata’ of size 176 2023-09-16T18:05:14,009 153 | Point lndata[11]; 2023-09-16T18:05:14,009 | ^~~~~~ 2023-09-16T18:05:14,353 In file included from /usr/include/c++/12/vector:70, 2023-09-16T18:05:14,353 from /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../detail/common.h:314, 2023-09-16T18:05:14,354 from /tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../attr.h:13: 2023-09-16T18:05:14,355 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’: 2023-09-16T18:05:14,355 /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:05:14,356 523 | vector<_Tp, _Alloc>:: 2023-09-16T18:05:14,357 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T18:05:14,553 In file included from /usr/include/c++/12/vector:64: 2023-09-16T18:05:14,554 In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-16T18:05:14,555 inlined from ‘void gemmi::StructureFactorCalculator::set_stol2_and_scattering_factors(const gemmi::Miller&) [with Table = gemmi::Neutron92]’ at include/gemmi/sfcalc.hpp:35:31, 2023-09-16T18:05:14,555 inlined from ‘std::complex gemmi::StructureFactorCalculator
::calculate_sf_from_small_structure(const gemmi::SmallStructure&, const gemmi::Miller&) [with Table = gemmi::Neutron92]’ at include/gemmi/sfcalc.hpp:127:37: 2023-09-16T18:05:14,556 /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:05:14,557 1032 | _M_fill_insert(end(), __new_size - size(), __x); 2023-09-16T18:05:14,557 | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:05:14,714 In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-16T18:05:14,715 inlined from ‘void gemmi::StructureFactorCalculator
::set_stol2_and_scattering_factors(const gemmi::Miller&) [with Table = gemmi::C4322]’ at include/gemmi/sfcalc.hpp:35:31, 2023-09-16T18:05:14,718 inlined from ‘std::complex gemmi::StructureFactorCalculator
::calculate_sf_from_small_structure(const gemmi::SmallStructure&, const gemmi::Miller&) [with Table = gemmi::C4322]’ at include/gemmi/sfcalc.hpp:127:37: 2023-09-16T18:05:14,719 /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:05:14,719 1032 | _M_fill_insert(end(), __new_size - size(), __x); 2023-09-16T18:05:14,720 | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:05:14,881 In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-16T18:05:14,881 inlined from ‘void gemmi::StructureFactorCalculator
::set_stol2_and_scattering_factors(const gemmi::Miller&) [with Table = gemmi::IT92]’ at include/gemmi/sfcalc.hpp:35:31, 2023-09-16T18:05:14,882 inlined from ‘std::complex gemmi::StructureFactorCalculator
::calculate_sf_from_small_structure(const gemmi::SmallStructure&, const gemmi::Miller&) [with Table = gemmi::IT92]’ at include/gemmi/sfcalc.hpp:127:37: 2023-09-16T18:05:14,883 /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:05:14,883 1032 | _M_fill_insert(end(), __new_size - size(), __x); 2023-09-16T18:05:14,884 | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:05:15,139 In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-16T18:05:15,140 inlined from ‘void gemmi::StructureFactorCalculator
::set_stol2_and_scattering_factors(const gemmi::Miller&) [with Table = gemmi::Neutron92]’ at include/gemmi/sfcalc.hpp:35:31, 2023-09-16T18:05:15,141 inlined from ‘std::complex gemmi::StructureFactorCalculator
::calculate_sf_from_model(const gemmi::Model&, const gemmi::Miller&) [with Table = gemmi::Neutron92]’ at include/gemmi/sfcalc.hpp:98:37: 2023-09-16T18:05:15,141 /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:05:15,142 1032 | _M_fill_insert(end(), __new_size - size(), __x); 2023-09-16T18:05:15,143 | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:05:15,420 In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-16T18:05:15,420 inlined from ‘void gemmi::StructureFactorCalculator
::set_stol2_and_scattering_factors(const gemmi::Miller&) [with Table = gemmi::C4322]’ at include/gemmi/sfcalc.hpp:35:31, 2023-09-16T18:05:15,421 inlined from ‘std::complex gemmi::StructureFactorCalculator
::calculate_sf_from_model(const gemmi::Model&, const gemmi::Miller&) [with Table = gemmi::C4322]’ at include/gemmi/sfcalc.hpp:98:37: 2023-09-16T18:05:15,422 /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:05:15,422 1032 | _M_fill_insert(end(), __new_size - size(), __x); 2023-09-16T18:05:15,423 | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:05:15,710 In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-16T18:05:15,711 inlined from ‘void gemmi::StructureFactorCalculator
::set_stol2_and_scattering_factors(const gemmi::Miller&) [with Table = gemmi::IT92]’ at include/gemmi/sfcalc.hpp:35:31, 2023-09-16T18:05:15,712 inlined from ‘std::complex gemmi::StructureFactorCalculator
::calculate_sf_from_model(const gemmi::Model&, const gemmi::Miller&) [with Table = gemmi::IT92]’ at include/gemmi/sfcalc.hpp:98:37: 2023-09-16T18:05:15,712 /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:05:15,713 1032 | _M_fill_insert(end(), __new_size - size(), __x); 2023-09-16T18:05:15,713 | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:05:22,305 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.3\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/sym.cpp -o build/temp.linux-armv7l-cpython-311/python/sym.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T18:06:16,902 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.3\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/topo.cpp -o build/temp.linux-armv7l-cpython-311/python/topo.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T18:07:02,177 In file included from /usr/include/c++/12/bits/stl_tree.h:63, 2023-09-16T18:07:02,177 from /usr/include/c++/12/map:60, 2023-09-16T18:07:02,178 from include/gemmi/topo.hpp:8, 2023-09-16T18:07:02,179 from python/topo.cpp:3: 2023-09-16T18:07:02,179 /usr/include/c++/12/bits/stl_algobase.h: In function ‘_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >]’: 2023-09-16T18:07:02,180 /usr/include/c++/12/bits/stl_algobase.h:2059:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:02,180 2059 | __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last, 2023-09-16T18:07:02,181 | ^~~~~~~~~ 2023-09-16T18:07:02,182 /usr/include/c++/12/bits/stl_algobase.h:2059:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:03,843 In file included from /usr/include/c++/12/algorithm:61, 2023-09-16T18:07:03,843 from include/gemmi/util.hpp:8, 2023-09-16T18:07:03,844 from include/gemmi/cifdoc.hpp:11, 2023-09-16T18:07:03,844 from include/gemmi/chemcomp.hpp:11, 2023-09-16T18:07:03,845 from include/gemmi/topo.hpp:10: 2023-09-16T18:07:03,846 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: 2023-09-16T18:07:03,846 /usr/include/c++/12/bits/stl_algo.h:1782:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:03,847 1782 | __unguarded_linear_insert(_RandomAccessIterator __last, 2023-09-16T18:07:03,848 | ^~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:07:03,967 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: 2023-09-16T18:07:03,968 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:03,968 1802 | __insertion_sort(_RandomAccessIterator __first, 2023-09-16T18:07:03,969 | ^~~~~~~~~~~~~~~~ 2023-09-16T18:07:03,970 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:04,959 In file included from /usr/include/c++/12/bits/stl_algo.h:60: 2023-09-16T18:07:04,959 /usr/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = gemmi::Atom; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: 2023-09-16T18:07:04,960 /usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:04,961 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, 2023-09-16T18:07:04,961 | ^~~~~~~~~~~~~ 2023-09-16T18:07:07,979 In file included from /usr/include/c++/12/vector:70, 2023-09-16T18:07:07,979 from include/gemmi/chemcomp.hpp:10: 2023-09-16T18:07:07,980 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Restraints::Angle&}; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’: 2023-09-16T18:07:07,981 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:07:07,981 439 | vector<_Tp, _Alloc>:: 2023-09-16T18:07:07,982 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T18:07:08,729 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Atom&}; _Tp = gemmi::Atom; _Alloc = std::allocator]’: 2023-09-16T18:07:08,729 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:07:08,855 In file included from /usr/include/c++/12/vector:64: 2023-09-16T18:07:08,855 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-16T18:07:08,856 inlined from ‘void gemmi::add_hydrogens_without_positions(const ChemComp&, Residue&)’ at include/gemmi/placeh.hpp:35:30: 2023-09-16T18:07:08,857 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:08,857 1287 | _M_realloc_insert(end(), __x); 2023-09-16T18:07:08,858 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T18:07:09,365 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Plane}; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’: 2023-09-16T18:07:09,366 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:07:09,367 439 | vector<_Tp, _Alloc>:: 2023-09-16T18:07:09,367 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T18:07:09,616 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Bond}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’: 2023-09-16T18:07:09,616 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:07:10,071 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Restraints::Torsion&}; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’: 2023-09-16T18:07:10,072 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:07:11,716 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::place_hydrogens(const Topo&, const Atom&)::BondedAtom}; _Tp = gemmi::place_hydrogens(const Topo&, const Atom&)::BondedAtom; _Alloc = std::allocator]’: 2023-09-16T18:07:11,717 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:07:11,932 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::place_hydrogens(const Topo&, const Atom&)::BondedAtom}; _Tp = gemmi::place_hydrogens(const Topo&, const Atom&)::BondedAtom; _Alloc = std::allocator]’, 2023-09-16T18:07:11,933 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::place_hydrogens(const Topo&, const Atom&)::BondedAtom; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-16T18:07:11,934 inlined from ‘void gemmi::place_hydrogens(const Topo&, const Atom&)’ at include/gemmi/placeh.hpp:151:24: 2023-09-16T18:07:11,934 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:11,935 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T18:07:11,936 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:07:16,863 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Restraints::Bond&}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’: 2023-09-16T18:07:16,863 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:07:16,864 439 | vector<_Tp, _Alloc>:: 2023-09-16T18:07:16,865 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T18:07:17,737 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-16T18:07:17,738 inlined from ‘void gemmi::ChemMod::apply_to(gemmi::ChemComp&) const’ at include/gemmi/monlib.hpp:416:38: 2023-09-16T18:07:17,739 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:17,740 1287 | _M_realloc_insert(end(), __x); 2023-09-16T18:07:17,740 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T18:07:17,741 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-16T18:07:17,742 inlined from ‘void gemmi::ChemMod::apply_to(gemmi::ChemComp&) const’ at include/gemmi/monlib.hpp:448:39: 2023-09-16T18:07:17,743 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:17,743 1287 | _M_realloc_insert(end(), __x); 2023-09-16T18:07:17,744 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T18:07:17,745 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-16T18:07:17,746 inlined from ‘void gemmi::ChemMod::apply_to(gemmi::ChemComp&) const’ at include/gemmi/monlib.hpp:474:41: 2023-09-16T18:07:17,746 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:17,747 1287 | _M_realloc_insert(end(), __x); 2023-09-16T18:07:17,747 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T18:07:17,748 In function ‘_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >]’, 2023-09-16T18:07:17,749 inlined from ‘_IIter std::find_if(_IIter, _IIter, _Predicate) [with _IIter = __gnu_cxx::__normal_iterator >; _Predicate = gemmi::Restraints::get_plane(const std::string&)::]’ at /usr/include/c++/12/bits/stl_algo.h:3877:28, 2023-09-16T18:07:17,750 inlined from ‘std::vector::iterator gemmi::Restraints::get_plane(const std::string&)’ at include/gemmi/chemcomp.hpp:262:24, 2023-09-16T18:07:17,750 inlined from ‘gemmi::Restraints::Plane& gemmi::Restraints::get_or_add_plane(const std::string&)’ at include/gemmi/chemcomp.hpp:267:48, 2023-09-16T18:07:17,751 inlined from ‘void gemmi::ChemMod::apply_to(gemmi::ChemComp&) const’ at include/gemmi/monlib.hpp:523:64: 2023-09-16T18:07:17,752 /usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:17,753 2112 | return __find_if(__first, __last, __pred, 2023-09-16T18:07:17,754 | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:07:17,754 2113 | std::__iterator_category(__first)); 2023-09-16T18:07:17,755 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:07:17,756 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Plane}; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’, 2023-09-16T18:07:17,757 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-16T18:07:17,758 inlined from ‘gemmi::Restraints::Plane& gemmi::Restraints::get_or_add_plane(const std::string&)’ at include/gemmi/chemcomp.hpp:270:21, 2023-09-16T18:07:17,759 inlined from ‘void gemmi::ChemMod::apply_to(gemmi::ChemComp&) const’ at include/gemmi/monlib.hpp:523:64: 2023-09-16T18:07:17,759 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:17,760 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T18:07:17,760 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:07:17,761 In function ‘_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >]’, 2023-09-16T18:07:17,762 inlined from ‘_IIter std::find_if(_IIter, _IIter, _Predicate) [with _IIter = __gnu_cxx::__normal_iterator >; _Predicate = gemmi::Restraints::get_plane(const std::string&)::]’ at /usr/include/c++/12/bits/stl_algo.h:3877:28, 2023-09-16T18:07:17,762 inlined from ‘std::vector::iterator gemmi::Restraints::get_plane(const std::string&)’ at include/gemmi/chemcomp.hpp:262:24, 2023-09-16T18:07:17,763 inlined from ‘void gemmi::ChemMod::apply_to(gemmi::ChemComp&) const’ at include/gemmi/monlib.hpp:530:40: 2023-09-16T18:07:17,764 /usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:17,765 2112 | return __find_if(__first, __last, __pred, 2023-09-16T18:07:17,765 | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:07:17,766 2113 | std::__iterator_category(__first)); 2023-09-16T18:07:17,767 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:07:33,465 In file included from /usr/include/c++/12/vector:63: 2023-09-16T18:07:33,465 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Bond*]’: 2023-09-16T18:07:33,466 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:33,467 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-16T18:07:33,467 | ^~~~~~~~~~~~~~~~ 2023-09-16T18:07:33,468 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:33,527 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*]’: 2023-09-16T18:07:33,528 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:33,529 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:33,612 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*]’: 2023-09-16T18:07:33,613 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:33,614 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:33,753 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*; bool _TrivialValueTypes = false]’, 2023-09-16T18:07:33,754 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T18:07:33,754 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*; _Tp = gemmi::Restraints::Torsion]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T18:07:33,755 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-16T18:07:33,756 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-16T18:07:33,756 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:33,757 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T18:07:33,757 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:07:45,936 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: 2023-09-16T18:07:45,936 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:45,937 1908 | __introsort_loop(_RandomAccessIterator __first, 2023-09-16T18:07:45,938 | ^~~~~~~~~~~~~~~~ 2023-09-16T18:07:45,938 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:45,940 /usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:45,941 1922 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); 2023-09-16T18:07:45,941 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:07:46,316 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*]’: 2023-09-16T18:07:46,316 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:46,317 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-16T18:07:46,317 | ^~~~~~~~~~~~~~~~ 2023-09-16T18:07:46,318 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:46,428 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*; bool _TrivialValueTypes = false]’, 2023-09-16T18:07:46,428 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T18:07:46,429 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*; _Tp = gemmi::Restraints::Plane]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T18:07:46,430 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-16T18:07:46,430 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-16T18:07:46,431 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:46,432 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T18:07:46,432 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:07:46,550 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Bond*; bool _TrivialValueTypes = false]’, 2023-09-16T18:07:46,551 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Bond*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T18:07:46,551 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Bond*; _Tp = gemmi::Restraints::Bond]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T18:07:46,552 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T18:07:46,552 inlined from ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’ at include/gemmi/chemcomp.hpp:25:8: 2023-09-16T18:07:46,553 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:46,554 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T18:07:46,554 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:07:46,555 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*; bool _TrivialValueTypes = false]’, 2023-09-16T18:07:46,556 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T18:07:46,557 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*; _Tp = gemmi::Restraints::Angle]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T18:07:46,557 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T18:07:46,558 inlined from ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’ at include/gemmi/chemcomp.hpp:25:8: 2023-09-16T18:07:46,558 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:46,559 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T18:07:46,560 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:07:46,560 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*; bool _TrivialValueTypes = false]’, 2023-09-16T18:07:46,561 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T18:07:46,561 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*; _Tp = gemmi::Restraints::Torsion]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T18:07:46,562 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T18:07:46,563 inlined from ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’ at include/gemmi/chemcomp.hpp:25:8: 2023-09-16T18:07:46,563 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:46,564 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T18:07:46,565 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:07:46,565 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*; bool _TrivialValueTypes = false]’, 2023-09-16T18:07:46,566 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T18:07:46,567 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*; _Tp = gemmi::Restraints::Plane]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T18:07:46,567 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-16T18:07:46,568 inlined from ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’ at include/gemmi/chemcomp.hpp:25:8: 2023-09-16T18:07:46,569 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:46,570 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T18:07:46,570 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:07:47,680 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Bond*; bool _TrivialValueTypes = false]’, 2023-09-16T18:07:47,681 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Bond*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T18:07:47,682 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Bond*; _Tp = gemmi::Restraints::Bond]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T18:07:47,682 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-16T18:07:47,683 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44, 2023-09-16T18:07:47,683 inlined from ‘gemmi::Restraints& gemmi::Restraints::operator=(const gemmi::Restraints&)’ at include/gemmi/chemcomp.hpp:25:8, 2023-09-16T18:07:47,684 inlined from ‘gemmi::ChemComp& gemmi::ChemComp::operator=(const gemmi::ChemComp&)’ at include/gemmi/chemcomp.hpp:302:8, 2023-09-16T18:07:47,685 inlined from ‘void gemmi::Topo::initialize_refmac_topology(const gemmi::Structure&, gemmi::Model&, gemmi::MonLib&, bool)’ at include/gemmi/topo.hpp:438:27: 2023-09-16T18:07:47,686 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:47,686 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T18:07:47,687 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:07:47,688 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*; bool _TrivialValueTypes = false]’, 2023-09-16T18:07:47,688 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-16T18:07:47,689 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*; _Tp = gemmi::Restraints::Angle]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-16T18:07:47,690 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-16T18:07:47,690 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44, 2023-09-16T18:07:47,691 inlined from ‘gemmi::Restraints& gemmi::Restraints::operator=(const gemmi::Restraints&)’ at include/gemmi/chemcomp.hpp:25:8, 2023-09-16T18:07:47,691 inlined from ‘gemmi::ChemComp& gemmi::ChemComp::operator=(const gemmi::ChemComp&)’ at include/gemmi/chemcomp.hpp:302:8, 2023-09-16T18:07:47,692 inlined from ‘void gemmi::Topo::initialize_refmac_topology(const gemmi::Structure&, gemmi::Model&, gemmi::MonLib&, bool)’ at include/gemmi/topo.hpp:438:27: 2023-09-16T18:07:47,692 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:47,693 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-16T18:07:47,694 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:07:47,696 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Bond}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-16T18:07:47,697 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-16T18:07:47,698 inlined from ‘void gemmi::Topo::initialize_refmac_topology(const gemmi::Structure&, gemmi::Model&, gemmi::MonLib&, bool)’ at include/gemmi/topo.hpp:509:28: 2023-09-16T18:07:47,699 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:47,699 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T18:07:47,700 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:07:49,072 In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’, 2023-09-16T18:07:49,073 inlined from ‘void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = gemmi::prepare_topology(Structure&, MonLib&, size_t, HydrogenChange, bool, std::ostream*, bool)::]’ at /usr/include/c++/12/bits/stl_algo.h:4853:18, 2023-09-16T18:07:49,074 inlined from ‘std::unique_ptr gemmi::prepare_topology(Structure&, MonLib&, size_t, HydrogenChange, bool, std::ostream*, bool)’ at include/gemmi/placeh.hpp:413:20: 2023-09-16T18:07:49,074 /usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:49,075 1937 | std::__introsort_loop(__first, __last, 2023-09-16T18:07:49,076 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 2023-09-16T18:07:49,076 1938 | std::__lg(__last - __first) * 2, 2023-09-16T18:07:49,077 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:07:49,077 1939 | __comp); 2023-09-16T18:07:49,078 | ~~~~~~~ 2023-09-16T18:07:49,079 In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’, 2023-09-16T18:07:49,079 inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’ at /usr/include/c++/12/bits/stl_algo.h:1940:31, 2023-09-16T18:07:49,080 inlined from ‘void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = gemmi::prepare_topology(Structure&, MonLib&, size_t, HydrogenChange, bool, std::ostream*, bool)::]’ at /usr/include/c++/12/bits/stl_algo.h:4853:18, 2023-09-16T18:07:49,081 inlined from ‘std::unique_ptr gemmi::prepare_topology(Structure&, MonLib&, size_t, HydrogenChange, bool, std::ostream*, bool)’ at include/gemmi/placeh.hpp:413:20: 2023-09-16T18:07:49,081 /usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:49,082 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); 2023-09-16T18:07:49,083 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:07:49,084 /usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:07:49,084 1854 | std::__insertion_sort(__first, __last, __comp); 2023-09-16T18:07:49,085 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:07:50,355 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.3\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/unitcell.cpp -o build/temp.linux-armv7l-cpython-311/python/unitcell.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T18:08:30,624 In file included from /usr/include/c++/12/vector:70, 2023-09-16T18:08:30,625 from include/gemmi/unitcell.hpp:10, 2023-09-16T18:08:30,626 from python/unitcell.cpp:3: 2023-09-16T18:08:30,626 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::FTransform}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-16T18:08:30,627 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-16T18:08:30,628 439 | vector<_Tp, _Alloc>:: 2023-09-16T18:08:30,628 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T18:08:30,757 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::FTransform}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-16T18:08:30,758 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::FTransform; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-16T18:08:30,758 inlined from ‘gemmi::UnitCell gemmi::UnitCell::changed_basis_backward(const gemmi::Op&, bool)’ at include/gemmi/unitcell.hpp:287:34: 2023-09-16T18:08:30,759 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:08:30,759 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T18:08:30,760 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:08:44,004 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2023-09-16T18:08:44,004 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2023-09-16T18:08:44,005 439 | vector<_Tp, _Alloc>:: 2023-09-16T18:08:44,006 | ^~~~~~~~~~~~~~~~~~~ 2023-09-16T18:08:44,053 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, 2023-09-16T18:08:44,053 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-16T18:08:44,054 inlined from ‘add_smat33(pybind11::module&, const char*)::)>’ at python/unitcell.cpp:70:23: 2023-09-16T18:08:44,055 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2023-09-16T18:08:44,055 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-16T18:08:44,056 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:09:02,810 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.3\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-yilicru7/gemmi_1ced8361f56449e8bb335b99307aa657/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/write.cpp -o build/temp.linux-armv7l-cpython-311/python/write.o -std=c++17 -fvisibility=hidden -g0 2023-09-16T18:09:30,148 In file included from /usr/include/c++/12/string:50, 2023-09-16T18:09:30,149 from include/gemmi/sprintf.hpp:32, 2023-09-16T18:09:30,150 from python/write.cpp:4: 2023-09-16T18:09:30,151 /usr/include/c++/12/bits/stl_algobase.h: In function ‘_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >]’: 2023-09-16T18:09:30,151 /usr/include/c++/12/bits/stl_algobase.h:2059:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:09:30,152 2059 | __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last, 2023-09-16T18:09:30,153 | ^~~~~~~~~ 2023-09-16T18:09:30,153 /usr/include/c++/12/bits/stl_algobase.h:2059:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:10:03,244 In function ‘_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >]’, 2023-09-16T18:10:03,244 inlined from ‘_IIter std::find_if(_IIter, _IIter, _Predicate) [with _IIter = __gnu_cxx::__normal_iterator >; _Predicate = gemmi::update_mmcif_block(const Structure&, cif::Block&, MmcifOutputGroups)::]’ at /usr/include/c++/12/bits/stl_algo.h:3877:28, 2023-09-16T18:10:03,245 inlined from ‘bool std::none_of(_IIter, _IIter, _Predicate) [with _IIter = __gnu_cxx::__normal_iterator >; _Predicate = gemmi::update_mmcif_block(const Structure&, cif::Block&, MmcifOutputGroups)::]’ at /usr/include/c++/12/bits/stl_algo.h:474:47, 2023-09-16T18:10:03,246 inlined from ‘bool std::any_of(_IIter, _IIter, _Predicate) [with _IIter = __gnu_cxx::__normal_iterator >; _Predicate = gemmi::update_mmcif_block(const Structure&, cif::Block&, MmcifOutputGroups)::]’ at /usr/include/c++/12/bits/stl_algo.h:493:27, 2023-09-16T18:10:03,246 inlined from ‘void gemmi::update_mmcif_block(const Structure&, cif::Block&, MmcifOutputGroups)’ at include/gemmi/to_mmcif.hpp:646:20: 2023-09-16T18:10:03,247 /usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-16T18:10:03,247 2112 | return __find_if(__first, __last, __pred, 2023-09-16T18:10:03,248 | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:10:03,249 2113 | std::__iterator_category(__first)); 2023-09-16T18:10:03,250 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T18:10:15,236 arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/python/align.o build/temp.linux-armv7l-cpython-311/python/ccp4.o build/temp.linux-armv7l-cpython-311/python/chemcomp.o build/temp.linux-armv7l-cpython-311/python/cif.o build/temp.linux-armv7l-cpython-311/python/custom.o build/temp.linux-armv7l-cpython-311/python/elem.o build/temp.linux-armv7l-cpython-311/python/gemmi.o build/temp.linux-armv7l-cpython-311/python/grid.o build/temp.linux-armv7l-cpython-311/python/hkl.o build/temp.linux-armv7l-cpython-311/python/meta.o build/temp.linux-armv7l-cpython-311/python/mol.o build/temp.linux-armv7l-cpython-311/python/monlib.o build/temp.linux-armv7l-cpython-311/python/mtz.o build/temp.linux-armv7l-cpython-311/python/read.o build/temp.linux-armv7l-cpython-311/python/recgrid.o build/temp.linux-armv7l-cpython-311/python/scaling.o build/temp.linux-armv7l-cpython-311/python/search.o build/temp.linux-armv7l-cpython-311/python/sf.o build/temp.linux-armv7l-cpython-311/python/sym.o build/temp.linux-armv7l-cpython-311/python/topo.o build/temp.linux-armv7l-cpython-311/python/unitcell.o build/temp.linux-armv7l-cpython-311/python/write.o -L/usr/lib/arm-linux-gnueabihf -Lbuild/temp.linux-armv7l-cpython-311 -lgemmi_zlib -lgemmi_zlib -o build/lib.linux-armv7l-cpython-311/gemmi.cpython-311-arm-linux-gnueabihf.so -Wl,-s 2023-09-16T18:10:17,895 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-09-16T18:10:17,896 !! 2023-09-16T18:10:17,896 ******************************************************************************** 2023-09-16T18:10:17,897 Please avoid running ``setup.py`` directly. 2023-09-16T18:10:17,897 Instead, use pypa/build, pypa/installer or other 2023-09-16T18:10:17,898 standards-based tools. 2023-09-16T18:10:17,899 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-09-16T18:10:17,899 ******************************************************************************** 2023-09-16T18:10:17,900 !! 2023-09-16T18:10:17,901 self.initialize_options() 2023-09-16T18:10:17,921 installing to build/bdist.linux-armv7l/wheel 2023-09-16T18:10:17,922 running install 2023-09-16T18:10:17,945 running install_lib 2023-09-16T18:10:17,970 creating build/bdist.linux-armv7l 2023-09-16T18:10:17,971 creating build/bdist.linux-armv7l/wheel 2023-09-16T18:10:17,972 copying build/lib.linux-armv7l-cpython-311/gemmi.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel 2023-09-16T18:10:19,746 creating build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-16T18:10:19,748 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/simple_search.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-16T18:10:19,751 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/aafreq.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-16T18:10:19,755 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/weight.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-16T18:10:19,759 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/mtz_i_sigi.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-16T18:10:19,762 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/__init__.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-16T18:10:19,765 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/sub_ccd.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-16T18:10:19,768 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/merge_mtz_mmcif.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-16T18:10:19,772 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/rama_gather.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-16T18:10:19,781 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/maskcheck.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-16T18:10:19,785 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/from_json.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-16T18:10:19,788 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/long_geom.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-16T18:10:19,791 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/multiproc.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-16T18:10:19,794 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/col_order.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-16T18:10:19,798 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/matthews.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-16T18:10:19,802 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/hello.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-16T18:10:19,806 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/monomers.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-16T18:10:19,810 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/maskdiff.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-16T18:10:19,813 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/map2mtz.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-16T18:10:19,817 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/ccd_gi.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-16T18:10:19,821 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/rama_plot.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-16T18:10:19,825 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/ccd_subgraph.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-16T18:10:19,830 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/__main__.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-16T18:10:19,835 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/cif_i_sigi.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-16T18:10:19,840 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/mtrix_iso.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-16T18:10:19,845 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/patterson_slice.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-16T18:10:19,850 running install_egg_info 2023-09-16T18:10:19,933 running egg_info 2023-09-16T18:10:19,960 writing gemmi.egg-info/PKG-INFO 2023-09-16T18:10:19,964 writing dependency_links to gemmi.egg-info/dependency_links.txt 2023-09-16T18:10:19,966 writing top-level names to gemmi.egg-info/top_level.txt 2023-09-16T18:10:20,003 reading manifest file 'gemmi.egg-info/SOURCES.txt' 2023-09-16T18:10:20,285 reading manifest template 'MANIFEST.in' 2023-09-16T18:10:20,383 adding license file 'LICENSE.txt' 2023-09-16T18:10:20,399 writing manifest file 'gemmi.egg-info/SOURCES.txt' 2023-09-16T18:10:20,401 Copying gemmi.egg-info to build/bdist.linux-armv7l/wheel/gemmi-0.5.3-py3.11.egg-info 2023-09-16T18:10:20,411 running install_scripts 2023-09-16T18:10:20,464 creating build/bdist.linux-armv7l/wheel/gemmi-0.5.3.dist-info/WHEEL 2023-09-16T18:10:20,467 creating '/tmp/pip-wheel-fr5tcixc/gemmi-0.5.3-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-09-16T18:10:21,672 adding 'gemmi.cpython-311-arm-linux-gnueabihf.so' 2023-09-16T18:10:21,727 adding 'gemmi-examples/__init__.py' 2023-09-16T18:10:21,729 adding 'gemmi-examples/__main__.py' 2023-09-16T18:10:21,730 adding 'gemmi-examples/aafreq.py' 2023-09-16T18:10:21,731 adding 'gemmi-examples/ccd_gi.py' 2023-09-16T18:10:21,733 adding 'gemmi-examples/ccd_subgraph.py' 2023-09-16T18:10:21,734 adding 'gemmi-examples/cif_i_sigi.py' 2023-09-16T18:10:21,735 adding 'gemmi-examples/col_order.py' 2023-09-16T18:10:21,736 adding 'gemmi-examples/from_json.py' 2023-09-16T18:10:21,738 adding 'gemmi-examples/hello.py' 2023-09-16T18:10:21,739 adding 'gemmi-examples/long_geom.py' 2023-09-16T18:10:21,740 adding 'gemmi-examples/map2mtz.py' 2023-09-16T18:10:21,741 adding 'gemmi-examples/maskcheck.py' 2023-09-16T18:10:21,743 adding 'gemmi-examples/maskdiff.py' 2023-09-16T18:10:21,744 adding 'gemmi-examples/matthews.py' 2023-09-16T18:10:21,745 adding 'gemmi-examples/merge_mtz_mmcif.py' 2023-09-16T18:10:21,747 adding 'gemmi-examples/monomers.py' 2023-09-16T18:10:21,748 adding 'gemmi-examples/mtrix_iso.py' 2023-09-16T18:10:21,749 adding 'gemmi-examples/mtz_i_sigi.py' 2023-09-16T18:10:21,751 adding 'gemmi-examples/multiproc.py' 2023-09-16T18:10:21,752 adding 'gemmi-examples/patterson_slice.py' 2023-09-16T18:10:21,753 adding 'gemmi-examples/rama_gather.py' 2023-09-16T18:10:21,754 adding 'gemmi-examples/rama_plot.py' 2023-09-16T18:10:21,756 adding 'gemmi-examples/simple_search.py' 2023-09-16T18:10:21,757 adding 'gemmi-examples/sub_ccd.py' 2023-09-16T18:10:21,758 adding 'gemmi-examples/weight.py' 2023-09-16T18:10:21,761 adding 'gemmi-0.5.3.dist-info/LICENSE.txt' 2023-09-16T18:10:21,762 adding 'gemmi-0.5.3.dist-info/METADATA' 2023-09-16T18:10:21,763 adding 'gemmi-0.5.3.dist-info/WHEEL' 2023-09-16T18:10:21,764 adding 'gemmi-0.5.3.dist-info/top_level.txt' 2023-09-16T18:10:21,765 adding 'gemmi-0.5.3.dist-info/RECORD' 2023-09-16T18:10:21,804 removing build/bdist.linux-armv7l/wheel 2023-09-16T18:10:21,966 Building wheel for gemmi (setup.py): finished with status 'done' 2023-09-16T18:10:22,000 Created wheel for gemmi: filename=gemmi-0.5.3-cp311-cp311-linux_armv7l.whl size=2605677 sha256=ff01c267e8c58f7149034c96838d0a04a5a2a72cfa03d8d115ed3bbee890332e 2023-09-16T18:10:22,001 Stored in directory: /tmp/pip-ephem-wheel-cache-tfj36vel/wheels/2d/2e/39/8aad4292bc7fc75824de435b94a7b44e22941426889b7a809d 2023-09-16T18:10:22,012 Successfully built gemmi 2023-09-16T18:10:22,085 Removed build tracker: '/tmp/pip-build-tracker-4ext5uxt'