2023-09-16T22:23:55,623 Created temporary directory: /tmp/pip-build-tracker-qthh8jlt 2023-09-16T22:23:55,624 Initialized build tracking at /tmp/pip-build-tracker-qthh8jlt 2023-09-16T22:23:55,625 Created build tracker: /tmp/pip-build-tracker-qthh8jlt 2023-09-16T22:23:55,625 Entered build tracker: /tmp/pip-build-tracker-qthh8jlt 2023-09-16T22:23:55,626 Created temporary directory: /tmp/pip-wheel-40xzyjns 2023-09-16T22:23:55,629 Created temporary directory: /tmp/pip-ephem-wheel-cache-82_g4kgt 2023-09-16T22:23:55,651 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-16T22:23:55,654 2 location(s) to search for versions of hydride: 2023-09-16T22:23:55,654 * https://pypi.org/simple/hydride/ 2023-09-16T22:23:55,654 * https://www.piwheels.org/simple/hydride/ 2023-09-16T22:23:55,655 Fetching project page and analyzing links: https://pypi.org/simple/hydride/ 2023-09-16T22:23:55,656 Getting page https://pypi.org/simple/hydride/ 2023-09-16T22:23:55,657 Found index url https://pypi.org/simple/ 2023-09-16T22:23:55,915 Fetched page https://pypi.org/simple/hydride/ as application/vnd.pypi.simple.v1+json 2023-09-16T22:23:55,924 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/c1/ca/10e337628717f218cd81d4978284023a49507206b884407939c9ac8259be/hydride-0.1.0-py3-none-any.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7,<4.0) 2023-09-16T22:23:55,925 Found link https://files.pythonhosted.org/packages/1c/b4/d17a34568a8a3f21e6f237ea45dadb2a13a2a0f03465e4de752caf1b47aa/hydride-0.1.0.tar.gz (from https://pypi.org/simple/hydride/) (requires-python:>=3.7,<4.0), version: 0.1.0 2023-09-16T22:23:55,926 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/82/4b/f96e324dcf4705ec39bb8153fa954a8fc8658a38767c70e4f26cbc1c4981/hydride-1.0.0-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,926 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/7d/1c/0a440a3a51e68d876c31d4cdf6429cea8af9d0438bbff432f90973027dac/hydride-1.0.0-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,927 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/e9/ec/b654ae4347b4372e5a4c00c330b4d8304bcf7307f34d1d2ace0489ca0bab/hydride-1.0.0-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,928 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/e9/58/0ee938ed1abca37c48533d7af0a22aef36c7a2a64cfacdd27b64d4473640/hydride-1.0.0-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,928 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/09/47/7c84f8e6b282e2cb4959134620da86b8d1a63ca4a90fe10fed6f3606748e/hydride-1.0.0-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,929 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/6b/94/41346ab7c36be1821b5e4b27cca8047863feaca12f5f324dc09ecd2f0c2f/hydride-1.0.0-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,930 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/af/50/8fa7c180fbabc1406f5fd3e052f19c0b8f17fd4946b8e60275ffb3f288fa/hydride-1.0.0-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,930 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/37/af/35a3c5099559d3d84497bd52e0a45e8679b0bf7e25ebe8cc5cbfc2d8c312/hydride-1.0.0-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,931 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/bc/d2/2b55d85ca01ea592babee40f1fa2ee787a9f467670f996f8f7476c648549/hydride-1.0.0-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,932 Found link https://files.pythonhosted.org/packages/00/a4/7b8ca110619fb5c74c555b91223bdfe38c0551c944e6291f8ad3c7bd3ca4/hydride-1.0.0.tar.gz (from https://pypi.org/simple/hydride/) (requires-python:>=3.7), version: 1.0.0 2023-09-16T22:23:55,932 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/69/fc/910197f4448fc4c20cf65d66d9fc0c51463eaa0c06e9838fb9c7fbe60e64/hydride-1.1.0-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,933 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/fe/00/74759e1c2099cb462fb1cfc2b5a4b5131bee9fc172e097e80b6fcae489e8/hydride-1.1.0-cp310-cp310-manylinux1_x86_64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,933 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/41/4b/8a5e4f990ac3a3ff08218f1263dc1bc45dc21aea2d5ffa5f8943c7c4913f/hydride-1.1.0-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,934 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/a3/f5/17329c029a5d9a9bac612eb84bd1c32734ad52bbce292427369a4ed1a372/hydride-1.1.0-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,934 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/00/f8/7145de2d08c70588187ddada8a7f1c6bd696a9247973833086651ca6e7b7/hydride-1.1.0-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,935 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/79/d6/a851b2cec64641a62b94fdb5a02ed715171c098f061e36472f5df66f0c32/hydride-1.1.0-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,935 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/7e/01/b4ca501199235069110ae8f913122b434422d5ca5e9f72215b48ecf9cf68/hydride-1.1.0-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,936 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/ed/e5/849f9e8f6aa1dc7b3432388fdd5d2f21be64d4a813399b9862e2b6f5d041/hydride-1.1.0-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,936 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/3b/1e/e691328a2b40c1d6894146542020bc074d488f334c103e3091ae33fa49f2/hydride-1.1.0-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,937 Found link https://files.pythonhosted.org/packages/2d/1d/70b2507223bd0d8986068236beb1ad0178e405c51de8718499e4e671cb15/hydride-1.1.0.tar.gz (from https://pypi.org/simple/hydride/) (requires-python:>=3.7), version: 1.1.0 2023-09-16T22:23:55,938 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/de/b1/10fa73f14fc62eec90bbb95931a46acbcf8674580656cf34339358b7d431/hydride-1.1.1-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,939 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/08/08/877ad64acaf60950a41280b5d819d41b063a705042bff71dde4be6e5f82e/hydride-1.1.1-cp310-cp310-manylinux1_x86_64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,939 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/9f/14/96b1caf87f260ea00db658e83e6ae6d09e8bc096a2003b721e1384ffd11f/hydride-1.1.1-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,940 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/6f/b3/d7184f2ffdaf8ed63488163c663bc6f3d99120a01250ed6812e41cd4df7b/hydride-1.1.1-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,941 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/12/0d/fdd485a72d0301e40728ed1e8030562e517c5e69c3cf38828326eae5ed81/hydride-1.1.1-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,941 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/89/11/daede9543ed710ebc5c163105c68c68355df12c8c2d1942bc8ea50e92e89/hydride-1.1.1-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,942 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/4a/a5/eb07e8887485bea6c290a27ccaf64ca72bf9da79664408247ec379585cc8/hydride-1.1.1-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,942 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/c1/6d/61aa50a96943b6503e4a7e323bc2b40bb0e5a6c2b98eb0b7f55eb419dce4/hydride-1.1.1-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,942 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/3b/2e/293d03ff36d5eae2699be25d899a61d7f0525bfcc1de4d2d2948477c2fbf/hydride-1.1.1-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,943 Found link https://files.pythonhosted.org/packages/6a/ed/a63ee98669907ef3316d4a39084b2274ebb52ea741fd26d408e1cd5adc08/hydride-1.1.1.tar.gz (from https://pypi.org/simple/hydride/) (requires-python:>=3.7), version: 1.1.1 2023-09-16T22:23:55,944 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/4d/d0/eeee127d8a47cd6842b3099e9365a292cd6a2ae8e4b4565a86fdc75becdb/hydride-1.1.2-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,945 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/65/db/b1cfba194c916ba99fd4a7bdf121098f153ad20dec27cf2c8a2b059f52f3/hydride-1.1.2-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,945 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/a5/a7/758a1d59672bf7c5c301bc89b911cb2f357ed106acbb8723600936ccaeb9/hydride-1.1.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,946 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/7e/7d/9c81f27b1183d661af993374bddfc4e14ed64f9be2eb93e808f4f0c7757b/hydride-1.1.2-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,946 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/7c/20/40ae9f6a99f434cd5c5db423f220fca2c8e9919fb455347107e7eea36190/hydride-1.1.2-cp311-cp311-macosx_10_9_x86_64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,947 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/cb/94/6f86716d642354efc1b5b51240d8a7aaf99069fd577357bf1121455ff253/hydride-1.1.2-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,947 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/42/ec/bc8674ec225e394f9d16a37dff943250ac76082139d8932322c06912f2df/hydride-1.1.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,948 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/7a/53/5f35976f533b8b42c5d2e85f99c7abe111973f7007d8192a0706717abcff/hydride-1.1.2-cp311-cp311-win_amd64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,949 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/6f/cd/ad58bdaf7a8e57a44e9c247ade9eab88d631a24c567a9292674919a1d987/hydride-1.1.2-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,949 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/e3/54/ef7eacaa7c262f0fb8708b6bbb32e0f0596d03fff195baa3a7a0ac9e5f37/hydride-1.1.2-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,950 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/f0/f8/3cf99968ad47183c0a8f31bc3ecf4e261de35414b338698f90aeb1aaa205/hydride-1.1.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,950 Skipping link: No binaries permitted for hydride: https://files.pythonhosted.org/packages/60/06/de67650274107f2523eed6771f112dd6ac5c589f8f46ccddb60a7416ec59/hydride-1.1.2-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:55,951 Found link https://files.pythonhosted.org/packages/7d/6a/1629fd07665ab8bff04e6f9c9031d63a555792cbef6a74ba6ff477d3d6ba/hydride-1.1.2.tar.gz (from https://pypi.org/simple/hydride/) (requires-python:>=3.7), version: 1.1.2 2023-09-16T22:23:55,952 Fetching project page and analyzing links: https://www.piwheels.org/simple/hydride/ 2023-09-16T22:23:55,952 Getting page https://www.piwheels.org/simple/hydride/ 2023-09-16T22:23:55,954 Found index url https://www.piwheels.org/simple/ 2023-09-16T22:23:56,208 Fetched page https://www.piwheels.org/simple/hydride/ as text/html 2023-09-16T22:23:56,212 Skipping link: No binaries permitted for hydride: https://www.piwheels.org/simple/hydride/hydride-1.1.2-cp39-cp39-linux_armv7l.whl#sha256=1ce3f7726c994696bc76e32871af167117cbbcb7f490b9eb6613f9ece249b13a (from https://www.piwheels.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:56,213 Skipping link: No binaries permitted for hydride: https://www.piwheels.org/simple/hydride/hydride-1.1.2-cp39-cp39-linux_armv6l.whl#sha256=1ce3f7726c994696bc76e32871af167117cbbcb7f490b9eb6613f9ece249b13a (from https://www.piwheels.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:56,214 Skipping link: No binaries permitted for hydride: https://www.piwheels.org/simple/hydride/hydride-1.1.2-cp37-cp37m-linux_armv7l.whl#sha256=40da0a39d4755dda084ca337ffdcf3f5444bbc4c5b64a5c2c8f266999a05aa4a (from https://www.piwheels.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:56,215 Skipping link: No binaries permitted for hydride: https://www.piwheels.org/simple/hydride/hydride-1.1.2-cp37-cp37m-linux_armv6l.whl#sha256=40da0a39d4755dda084ca337ffdcf3f5444bbc4c5b64a5c2c8f266999a05aa4a (from https://www.piwheels.org/simple/hydride/) (requires-python:>=3.7) 2023-09-16T22:23:56,215 Skipping link: No binaries permitted for hydride: https://www.piwheels.org/simple/hydride/hydride-0.1.0-py3-none-any.whl#sha256=a456732a6cf18307244549dabc3384559c6861beb4d3be3dbb2ec64b71d3be19 (from https://www.piwheels.org/simple/hydride/) (requires-python:>=3.7,<4.0) 2023-09-16T22:23:56,216 Skipping link: not a file: https://www.piwheels.org/simple/hydride/ 2023-09-16T22:23:56,217 Skipping link: not a file: https://pypi.org/simple/hydride/ 2023-09-16T22:23:56,245 Given no hashes to check 1 links for project 'hydride': discarding no candidates 2023-09-16T22:23:56,271 Collecting hydride==1.1.1 2023-09-16T22:23:56,274 Created temporary directory: /tmp/pip-unpack-ted1tl6j 2023-09-16T22:23:56,526 Downloading hydride-1.1.1.tar.gz (237 kB) 2023-09-16T22:23:56,720 Added hydride==1.1.1 from https://files.pythonhosted.org/packages/6a/ed/a63ee98669907ef3316d4a39084b2274ebb52ea741fd26d408e1cd5adc08/hydride-1.1.1.tar.gz to build tracker '/tmp/pip-build-tracker-qthh8jlt' 2023-09-16T22:23:56,728 Created temporary directory: /tmp/pip-build-env-gnp235lq 2023-09-16T22:23:56,733 Installing build dependencies: started 2023-09-16T22:23:56,734 Running command pip subprocess to install build dependencies 2023-09-16T22:23:57,900 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-09-16T22:23:58,398 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-16T22:24:00,185 Collecting setuptools>=0.30 2023-09-16T22:24:00,186 Obtaining dependency information for setuptools>=0.30 from https://files.pythonhosted.org/packages/bb/26/7945080113158354380a12ce26873dd6c1ebd88d47f5bc24e2c5bb38c16a/setuptools-68.2.2-py3-none-any.whl.metadata 2023-09-16T22:24:00,192 Using cached setuptools-68.2.2-py3-none-any.whl.metadata (6.3 kB) 2023-09-16T22:24:00,404 Collecting wheel>=0.30 2023-09-16T22:24:00,419 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB) 2023-09-16T22:24:00,837 Collecting biotite>=0.28 2023-09-16T22:24:00,992 Downloading biotite-0.38.0.tar.gz (32.7 MB) 2023-09-16T22:24:03,668 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 32.7/32.7 MB 7.0 MB/s eta 0:00:00 2023-09-16T22:24:09,834 Installing build dependencies: started 2023-09-16T22:24:09,835 Running command pip subprocess to install build dependencies 2023-09-16T22:24:11,458 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-16T22:24:13,381 Collecting setuptools>=0.30 2023-09-16T22:24:13,398 Obtaining dependency information for setuptools>=0.30 from https://files.pythonhosted.org/packages/bb/26/7945080113158354380a12ce26873dd6c1ebd88d47f5bc24e2c5bb38c16a/setuptools-68.2.2-py3-none-any.whl.metadata 2023-09-16T22:24:13,403 Using cached setuptools-68.2.2-py3-none-any.whl.metadata (6.3 kB) 2023-09-16T22:24:13,625 Collecting wheel>=0.30 2023-09-16T22:24:13,643 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB) 2023-09-16T22:24:13,759 Collecting oldest-supported-numpy 2023-09-16T22:24:13,778 Using cached https://www.piwheels.org/simple/oldest-supported-numpy/oldest_supported_numpy-2023.8.3-py3-none-any.whl (4.8 kB) 2023-09-16T22:24:15,147 Collecting cython>=3.0 2023-09-16T22:24:15,149 Obtaining dependency information for cython>=3.0 from https://files.pythonhosted.org/packages/03/e9/9cc0c4f0d8a566089d096254cd25168a0db02dd047863a7f995d8d3eefa7/Cython-3.0.2-py2.py3-none-any.whl.metadata 2023-09-16T22:24:15,154 Using cached Cython-3.0.2-py2.py3-none-any.whl.metadata (3.1 kB) 2023-09-16T22:24:16,584 Collecting numpy==1.23.2 (from oldest-supported-numpy) 2023-09-16T22:24:16,584 Using cached numpy-1.23.2-cp311-cp311-linux_armv7l.whl 2023-09-16T22:24:16,652 Using cached setuptools-68.2.2-py3-none-any.whl (807 kB) 2023-09-16T22:24:16,688 Using cached Cython-3.0.2-py2.py3-none-any.whl (1.2 MB) 2023-09-16T22:24:19,322 Installing collected packages: wheel, setuptools, numpy, cython, oldest-supported-numpy 2023-09-16T22:24:33,837 Successfully installed cython-3.0.2 numpy-1.23.2 oldest-supported-numpy-2023.8.3 setuptools-68.2.2 wheel-0.41.2 2023-09-16T22:24:34,465 Installing build dependencies: finished with status 'done' 2023-09-16T22:24:34,469 Getting requirements to build wheel: started 2023-09-16T22:24:34,470 Running command Getting requirements to build wheel 2023-09-16T22:24:36,259 running egg_info 2023-09-16T22:24:36,264 writing src/biotite.egg-info/PKG-INFO 2023-09-16T22:24:36,268 writing dependency_links to src/biotite.egg-info/dependency_links.txt 2023-09-16T22:24:36,271 writing requirements to src/biotite.egg-info/requires.txt 2023-09-16T22:24:36,272 writing top-level names to src/biotite.egg-info/top_level.txt 2023-09-16T22:24:36,334 reading manifest file 'src/biotite.egg-info/SOURCES.txt' 2023-09-16T22:24:36,343 reading manifest template 'MANIFEST.in' 2023-09-16T22:24:36,344 adding license file 'LICENSE.rst' 2023-09-16T22:24:36,358 writing manifest file 'src/biotite.egg-info/SOURCES.txt' 2023-09-16T22:24:36,542 Getting requirements to build wheel: finished with status 'done' 2023-09-16T22:24:36,554 Preparing metadata (pyproject.toml): started 2023-09-16T22:24:36,555 Running command Preparing metadata (pyproject.toml) 2023-09-16T22:24:38,179 running dist_info 2023-09-16T22:24:38,185 creating /tmp/pip-modern-metadata-f8gcjzh4/biotite.egg-info 2023-09-16T22:24:38,190 writing /tmp/pip-modern-metadata-f8gcjzh4/biotite.egg-info/PKG-INFO 2023-09-16T22:24:38,194 writing dependency_links to /tmp/pip-modern-metadata-f8gcjzh4/biotite.egg-info/dependency_links.txt 2023-09-16T22:24:38,196 writing requirements to /tmp/pip-modern-metadata-f8gcjzh4/biotite.egg-info/requires.txt 2023-09-16T22:24:38,197 writing top-level names to /tmp/pip-modern-metadata-f8gcjzh4/biotite.egg-info/top_level.txt 2023-09-16T22:24:38,199 writing manifest file '/tmp/pip-modern-metadata-f8gcjzh4/biotite.egg-info/SOURCES.txt' 2023-09-16T22:24:38,255 reading manifest file '/tmp/pip-modern-metadata-f8gcjzh4/biotite.egg-info/SOURCES.txt' 2023-09-16T22:24:38,257 reading manifest template 'MANIFEST.in' 2023-09-16T22:24:38,258 adding license file 'LICENSE.rst' 2023-09-16T22:24:38,269 writing manifest file '/tmp/pip-modern-metadata-f8gcjzh4/biotite.egg-info/SOURCES.txt' 2023-09-16T22:24:38,271 creating '/tmp/pip-modern-metadata-f8gcjzh4/biotite-0.38.0.dist-info' 2023-09-16T22:24:38,487 Preparing metadata (pyproject.toml): finished with status 'done' 2023-09-16T22:24:39,199 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/3a/be/650f9c091ef71cb01d735775d554e068752d3ff63d7943b26316dc401749/numpy-1.21.2.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2023-09-16T22:24:39,206 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/5f/d6/ad58ded26556eaeaa8c971e08b6466f17c4ac4d786cd3d800e26ce59cc01/numpy-1.21.3.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2023-09-16T22:24:39,213 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/fb/48/b0708ebd7718a8933f0d3937513ef8ef2f4f04529f1f66ca86d873043921/numpy-1.21.4.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2023-09-16T22:24:39,220 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/c2/a8/a924a09492bdfee8c2ec3094d0a13f2799800b4fdc9c890738aeeb12c72e/numpy-1.21.5.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2023-09-16T22:24:39,226 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/45/b7/de7b8e67f2232c26af57c205aaad29fe17754f793404f59c8a730c7a191a/numpy-1.21.6.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2023-09-16T22:24:39,865 Collecting numpy<=1.21,>=1.14 2023-09-16T22:24:39,879 Downloading numpy-1.21.0.zip (10.3 MB) 2023-09-16T22:24:40,688 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 10.3/10.3 MB 12.8 MB/s eta 0:00:00 2023-09-16T22:24:44,392 Installing build dependencies: started 2023-09-16T22:24:44,393 Running command pip subprocess to install build dependencies 2023-09-16T22:24:46,122 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-16T22:24:46,123 Ignoring packaging: markers 'platform_machine == "arm64"' don't match your environment 2023-09-16T22:24:47,813 Collecting setuptools<49.2.0 2023-09-16T22:24:47,878 Using cached https://www.piwheels.org/simple/setuptools/setuptools-49.1.3-py3-none-any.whl (792 kB) 2023-09-16T22:24:48,108 Collecting wheel==0.36.2 2023-09-16T22:24:48,119 Downloading https://www.piwheels.org/simple/wheel/wheel-0.36.2-py2.py3-none-any.whl (35 kB) 2023-09-16T22:24:49,509 Collecting Cython<3.0,>=0.29.21 2023-09-16T22:24:49,510 Obtaining dependency information for Cython<3.0,>=0.29.21 from https://files.pythonhosted.org/packages/3f/d6/9eed523aeaca42acbaa3e6d3850edae780dc7f8da9df1bf6a2ceb851839c/Cython-0.29.36-py2.py3-none-any.whl.metadata 2023-09-16T22:24:49,515 Using cached Cython-0.29.36-py2.py3-none-any.whl.metadata (3.1 kB) 2023-09-16T22:24:49,619 Using cached Cython-0.29.36-py2.py3-none-any.whl (988 kB) 2023-09-16T22:24:52,004 Installing collected packages: wheel, setuptools, Cython 2023-09-16T22:24:56,127 ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts. 2023-09-16T22:24:56,128 setuptools-rust 1.7.0 requires setuptools>=62.4, but you have setuptools 49.1.3 which is incompatible. 2023-09-16T22:24:56,130 Successfully installed Cython-0.29.36 setuptools-49.1.3 wheel-0.36.2 2023-09-16T22:24:56,714 Installing build dependencies: finished with status 'done' 2023-09-16T22:24:56,722 Getting requirements to build wheel: started 2023-09-16T22:24:56,724 Running command Getting requirements to build wheel 2023-09-16T22:24:57,244 setup.py:63: RuntimeWarning: NumPy 1.21.0 may not yet support Python 3.11. 2023-09-16T22:24:57,245 warnings.warn( 2023-09-16T22:24:57,257 Running from numpy source directory. 2023-09-16T22:24:58,064 running egg_info 2023-09-16T22:24:58,067 running build_src 2023-09-16T22:24:58,069 build_src 2023-09-16T22:24:58,071 creating numpy.egg-info 2023-09-16T22:24:58,073 writing numpy.egg-info/PKG-INFO 2023-09-16T22:24:58,076 writing dependency_links to numpy.egg-info/dependency_links.txt 2023-09-16T22:24:58,079 writing entry points to numpy.egg-info/entry_points.txt 2023-09-16T22:24:58,081 writing top-level names to numpy.egg-info/top_level.txt 2023-09-16T22:24:58,083 writing manifest file 'numpy.egg-info/SOURCES.txt' 2023-09-16T22:24:58,087 reading manifest file 'numpy.egg-info/SOURCES.txt' 2023-09-16T22:24:58,090 reading manifest template 'MANIFEST.in' 2023-09-16T22:24:58,093 warning: no previously-included files found matching 'LICENSES_bundled.txt' 2023-09-16T22:24:58,095 warning: no previously-included files found matching '.*' 2023-09-16T22:24:58,096 warning: no previously-included files found matching 'azure-*.yml' 2023-09-16T22:24:59,200 no previously-included directories found matching 'doc/build' 2023-09-16T22:24:59,203 no previously-included directories found matching 'doc/source/generated' 2023-09-16T22:24:59,216 no previously-included directories found matching 'benchmarks/env' 2023-09-16T22:24:59,219 no previously-included directories found matching 'benchmarks/results' 2023-09-16T22:24:59,222 no previously-included directories found matching 'benchmarks/html' 2023-09-16T22:24:59,226 no previously-included directories found matching 'benchmarks/numpy' 2023-09-16T22:24:59,239 warning: no previously-included files matching '*.pyo' found anywhere in distribution 2023-09-16T22:24:59,245 warning: no previously-included files matching '*.pyd' found anywhere in distribution 2023-09-16T22:24:59,251 warning: no previously-included files matching '*.swp' found anywhere in distribution 2023-09-16T22:24:59,257 warning: no previously-included files matching '*.bak' found anywhere in distribution 2023-09-16T22:24:59,263 warning: no previously-included files matching '*~' found anywhere in distribution 2023-09-16T22:24:59,318 writing manifest file 'numpy.egg-info/SOURCES.txt' 2023-09-16T22:24:59,439 Getting requirements to build wheel: finished with status 'done' 2023-09-16T22:24:59,452 Preparing metadata (pyproject.toml): started 2023-09-16T22:24:59,453 Running command Preparing metadata (pyproject.toml) 2023-09-16T22:24:59,917 setup.py:63: RuntimeWarning: NumPy 1.21.0 may not yet support Python 3.11. 2023-09-16T22:24:59,919 warnings.warn( 2023-09-16T22:24:59,920 Running from numpy source directory. 2023-09-16T22:25:00,409 running dist_info 2023-09-16T22:25:00,412 running build_src 2023-09-16T22:25:00,413 build_src 2023-09-16T22:25:00,414 creating /tmp/pip-modern-metadata-7us7h9jy/numpy.egg-info 2023-09-16T22:25:00,416 writing /tmp/pip-modern-metadata-7us7h9jy/numpy.egg-info/PKG-INFO 2023-09-16T22:25:00,417 writing dependency_links to /tmp/pip-modern-metadata-7us7h9jy/numpy.egg-info/dependency_links.txt 2023-09-16T22:25:00,419 writing entry points to /tmp/pip-modern-metadata-7us7h9jy/numpy.egg-info/entry_points.txt 2023-09-16T22:25:00,420 writing top-level names to /tmp/pip-modern-metadata-7us7h9jy/numpy.egg-info/top_level.txt 2023-09-16T22:25:00,422 writing manifest file '/tmp/pip-modern-metadata-7us7h9jy/numpy.egg-info/SOURCES.txt' 2023-09-16T22:25:00,424 reading manifest file '/tmp/pip-modern-metadata-7us7h9jy/numpy.egg-info/SOURCES.txt' 2023-09-16T22:25:00,425 reading manifest template 'MANIFEST.in' 2023-09-16T22:25:00,427 warning: no previously-included files found matching 'LICENSES_bundled.txt' 2023-09-16T22:25:00,429 warning: no previously-included files found matching '.*' 2023-09-16T22:25:00,430 warning: no previously-included files found matching 'azure-*.yml' 2023-09-16T22:25:01,496 no previously-included directories found matching 'doc/build' 2023-09-16T22:25:01,500 no previously-included directories found matching 'doc/source/generated' 2023-09-16T22:25:01,512 no previously-included directories found matching 'benchmarks/env' 2023-09-16T22:25:01,515 no previously-included directories found matching 'benchmarks/results' 2023-09-16T22:25:01,518 no previously-included directories found matching 'benchmarks/html' 2023-09-16T22:25:01,528 no previously-included directories found matching 'benchmarks/numpy' 2023-09-16T22:25:01,533 warning: no previously-included files matching '*.pyo' found anywhere in distribution 2023-09-16T22:25:01,538 warning: no previously-included files matching '*.pyd' found anywhere in distribution 2023-09-16T22:25:01,543 warning: no previously-included files matching '*.swp' found anywhere in distribution 2023-09-16T22:25:01,547 warning: no previously-included files matching '*.bak' found anywhere in distribution 2023-09-16T22:25:01,552 warning: no previously-included files matching '*~' found anywhere in distribution 2023-09-16T22:25:01,606 writing manifest file '/tmp/pip-modern-metadata-7us7h9jy/numpy.egg-info/SOURCES.txt' 2023-09-16T22:25:01,608 creating '/tmp/pip-modern-metadata-7us7h9jy/numpy.dist-info' 2023-09-16T22:25:01,661 adding license file "LICENSE.txt" (matched pattern "LICEN[CS]E*") 2023-09-16T22:25:01,788 Preparing metadata (pyproject.toml): finished with status 'done' 2023-09-16T22:25:02,373 Collecting msgpack>=0.5.6 2023-09-16T22:25:02,387 Using cached https://www.piwheels.org/simple/msgpack/msgpack-1.0.3-cp311-cp311-linux_armv7l.whl (15 kB) 2023-09-16T22:25:03,825 Collecting cython>=0.29 2023-09-16T22:25:03,826 Obtaining dependency information for cython>=0.29 from https://files.pythonhosted.org/packages/03/e9/9cc0c4f0d8a566089d096254cd25168a0db02dd047863a7f995d8d3eefa7/Cython-3.0.2-py2.py3-none-any.whl.metadata 2023-09-16T22:25:03,831 Using cached Cython-3.0.2-py2.py3-none-any.whl.metadata (3.1 kB) 2023-09-16T22:25:04,246 Collecting requests>=2.12 (from biotite>=0.28) 2023-09-16T22:25:04,261 Using cached https://www.piwheels.org/simple/requests/requests-2.31.0-py3-none-any.whl (62 kB) 2023-09-16T22:25:04,476 Collecting networkx>=2.0 (from biotite>=0.28) 2023-09-16T22:25:04,646 Using cached https://www.piwheels.org/simple/networkx/networkx-3.1-py3-none-any.whl (2.1 MB) 2023-09-16T22:25:05,179 Collecting charset-normalizer<4,>=2 (from requests>=2.12->biotite>=0.28) 2023-09-16T22:25:05,193 Using cached https://www.piwheels.org/simple/charset-normalizer/charset_normalizer-3.2.0-py3-none-any.whl (46 kB) 2023-09-16T22:25:05,296 Collecting idna<4,>=2.5 (from requests>=2.12->biotite>=0.28) 2023-09-16T22:25:05,310 Using cached https://www.piwheels.org/simple/idna/idna-3.4-py3-none-any.whl (61 kB) 2023-09-16T22:25:05,590 Collecting urllib3<3,>=1.21.1 (from requests>=2.12->biotite>=0.28) 2023-09-16T22:25:05,612 Using cached https://www.piwheels.org/simple/urllib3/urllib3-2.0.4-py3-none-any.whl (123 kB) 2023-09-16T22:25:05,775 Collecting certifi>=2017.4.17 (from requests>=2.12->biotite>=0.28) 2023-09-16T22:25:05,797 Using cached https://www.piwheels.org/simple/certifi/certifi-2023.7.22-py3-none-any.whl (158 kB) 2023-09-16T22:25:05,893 Using cached setuptools-68.2.2-py3-none-any.whl (807 kB) 2023-09-16T22:25:05,934 Using cached Cython-3.0.2-py2.py3-none-any.whl (1.2 MB) 2023-09-16T22:25:06,013 Building wheels for collected packages: biotite, numpy 2023-09-16T22:25:06,018 Building wheel for biotite (pyproject.toml): started 2023-09-16T22:25:06,019 Running command Building wheel for biotite (pyproject.toml) 2023-09-16T22:25:07,660 running bdist_wheel 2023-09-16T22:25:07,682 running build 2023-09-16T22:25:07,683 running build_py 2023-09-16T22:25:07,688 creating build 2023-09-16T22:25:07,689 creating build/lib.linux-armv7l-cpython-311 2023-09-16T22:25:07,691 creating build/lib.linux-armv7l-cpython-311/biotite 2023-09-16T22:25:07,692 copying src/biotite/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite 2023-09-16T22:25:07,695 copying src/biotite/visualize.py -> build/lib.linux-armv7l-cpython-311/biotite 2023-09-16T22:25:07,698 copying src/biotite/file.py -> build/lib.linux-armv7l-cpython-311/biotite 2023-09-16T22:25:07,701 copying src/biotite/copyable.py -> build/lib.linux-armv7l-cpython-311/biotite 2023-09-16T22:25:07,703 copying src/biotite/temp.py -> build/lib.linux-armv7l-cpython-311/biotite 2023-09-16T22:25:07,706 creating build/lib.linux-armv7l-cpython-311/biotite/structure 2023-09-16T22:25:07,707 copying src/biotite/structure/basepairs.py -> build/lib.linux-armv7l-cpython-311/biotite/structure 2023-09-16T22:25:07,710 copying src/biotite/structure/transform.py -> build/lib.linux-armv7l-cpython-311/biotite/structure 2023-09-16T22:25:07,713 copying src/biotite/structure/chains.py -> build/lib.linux-armv7l-cpython-311/biotite/structure 2023-09-16T22:25:07,715 copying src/biotite/structure/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/structure 2023-09-16T22:25:07,717 copying src/biotite/structure/rdf.py -> build/lib.linux-armv7l-cpython-311/biotite/structure 2023-09-16T22:25:07,719 copying src/biotite/structure/molecules.py -> build/lib.linux-armv7l-cpython-311/biotite/structure 2023-09-16T22:25:07,722 copying src/biotite/structure/density.py -> build/lib.linux-armv7l-cpython-311/biotite/structure 2023-09-16T22:25:07,724 copying src/biotite/structure/util.py -> build/lib.linux-armv7l-cpython-311/biotite/structure 2023-09-16T22:25:07,726 copying src/biotite/structure/error.py -> build/lib.linux-armv7l-cpython-311/biotite/structure 2023-09-16T22:25:07,728 copying src/biotite/structure/sse.py -> build/lib.linux-armv7l-cpython-311/biotite/structure 2023-09-16T22:25:07,730 copying src/biotite/structure/compare.py -> build/lib.linux-armv7l-cpython-311/biotite/structure 2023-09-16T22:25:07,732 copying src/biotite/structure/integrity.py -> build/lib.linux-armv7l-cpython-311/biotite/structure 2023-09-16T22:25:07,735 copying src/biotite/structure/geometry.py -> build/lib.linux-armv7l-cpython-311/biotite/structure 2023-09-16T22:25:07,738 copying src/biotite/structure/dotbracket.py -> build/lib.linux-armv7l-cpython-311/biotite/structure 2023-09-16T22:25:07,740 copying src/biotite/structure/box.py -> build/lib.linux-armv7l-cpython-311/biotite/structure 2023-09-16T22:25:07,742 copying src/biotite/structure/mechanics.py -> build/lib.linux-armv7l-cpython-311/biotite/structure 2023-09-16T22:25:07,744 copying src/biotite/structure/resutil.py -> build/lib.linux-armv7l-cpython-311/biotite/structure 2023-09-16T22:25:07,747 copying src/biotite/structure/hbond.py -> build/lib.linux-armv7l-cpython-311/biotite/structure 2023-09-16T22:25:07,750 copying src/biotite/structure/atoms.py -> build/lib.linux-armv7l-cpython-311/biotite/structure 2023-09-16T22:25:07,753 copying src/biotite/structure/residues.py -> build/lib.linux-armv7l-cpython-311/biotite/structure 2023-09-16T22:25:07,755 copying src/biotite/structure/pseudoknots.py -> build/lib.linux-armv7l-cpython-311/biotite/structure 2023-09-16T22:25:07,758 copying src/biotite/structure/superimpose.py -> build/lib.linux-armv7l-cpython-311/biotite/structure 2023-09-16T22:25:07,760 copying src/biotite/structure/filter.py -> build/lib.linux-armv7l-cpython-311/biotite/structure 2023-09-16T22:25:07,762 creating build/lib.linux-armv7l-cpython-311/biotite/sequence 2023-09-16T22:25:07,763 copying src/biotite/sequence/search.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence 2023-09-16T22:25:07,766 copying src/biotite/sequence/codon.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence 2023-09-16T22:25:07,768 copying src/biotite/sequence/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence 2023-09-16T22:25:07,770 copying src/biotite/sequence/sequence.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence 2023-09-16T22:25:07,772 copying src/biotite/sequence/alphabet.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence 2023-09-16T22:25:07,774 copying src/biotite/sequence/profile.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence 2023-09-16T22:25:07,777 copying src/biotite/sequence/annotation.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence 2023-09-16T22:25:07,780 copying src/biotite/sequence/seqtypes.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence 2023-09-16T22:25:07,783 creating build/lib.linux-armv7l-cpython-311/biotite/database 2023-09-16T22:25:07,784 copying src/biotite/database/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/database 2023-09-16T22:25:07,785 copying src/biotite/database/error.py -> build/lib.linux-armv7l-cpython-311/biotite/database 2023-09-16T22:25:07,788 creating build/lib.linux-armv7l-cpython-311/biotite/application 2023-09-16T22:25:07,789 copying src/biotite/application/application.py -> build/lib.linux-armv7l-cpython-311/biotite/application 2023-09-16T22:25:07,791 copying src/biotite/application/localapp.py -> build/lib.linux-armv7l-cpython-311/biotite/application 2023-09-16T22:25:07,793 copying src/biotite/application/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/application 2023-09-16T22:25:07,795 copying src/biotite/application/msaapp.py -> build/lib.linux-armv7l-cpython-311/biotite/application 2023-09-16T22:25:07,798 copying src/biotite/application/webapp.py -> build/lib.linux-armv7l-cpython-311/biotite/application 2023-09-16T22:25:07,800 copying src/biotite/application/util.py -> build/lib.linux-armv7l-cpython-311/biotite/application 2023-09-16T22:25:07,802 creating build/lib.linux-armv7l-cpython-311/biotite/structure/info 2023-09-16T22:25:07,803 copying src/biotite/structure/info/masses.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/info 2023-09-16T22:25:07,806 copying src/biotite/structure/info/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/info 2023-09-16T22:25:07,808 copying src/biotite/structure/info/bonds.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/info 2023-09-16T22:25:07,810 copying src/biotite/structure/info/carbohydrates.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/info 2023-09-16T22:25:07,812 copying src/biotite/structure/info/radii.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/info 2023-09-16T22:25:07,814 copying src/biotite/structure/info/standardize.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/info 2023-09-16T22:25:07,816 copying src/biotite/structure/info/misc.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/info 2023-09-16T22:25:07,819 copying src/biotite/structure/info/nucleotides.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/info 2023-09-16T22:25:07,820 copying src/biotite/structure/info/atoms.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/info 2023-09-16T22:25:07,822 copying src/biotite/structure/info/amino_acids.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/info 2023-09-16T22:25:07,824 creating build/lib.linux-armv7l-cpython-311/biotite/structure/graphics 2023-09-16T22:25:07,825 copying src/biotite/structure/graphics/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/graphics 2023-09-16T22:25:07,827 copying src/biotite/structure/graphics/rna.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/graphics 2023-09-16T22:25:07,830 copying src/biotite/structure/graphics/atoms.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/graphics 2023-09-16T22:25:07,832 creating build/lib.linux-armv7l-cpython-311/biotite/structure/io 2023-09-16T22:25:07,833 copying src/biotite/structure/io/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io 2023-09-16T22:25:07,836 copying src/biotite/structure/io/trajfile.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io 2023-09-16T22:25:07,838 copying src/biotite/structure/io/general.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io 2023-09-16T22:25:07,840 copying src/biotite/structure/io/ctab.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io 2023-09-16T22:25:07,843 creating build/lib.linux-armv7l-cpython-311/biotite/structure/io/tng 2023-09-16T22:25:07,844 copying src/biotite/structure/io/tng/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/tng 2023-09-16T22:25:07,847 copying src/biotite/structure/io/tng/file.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/tng 2023-09-16T22:25:07,849 creating build/lib.linux-armv7l-cpython-311/biotite/structure/io/mol 2023-09-16T22:25:07,850 copying src/biotite/structure/io/mol/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/mol 2023-09-16T22:25:07,853 copying src/biotite/structure/io/mol/convert.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/mol 2023-09-16T22:25:07,855 copying src/biotite/structure/io/mol/file.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/mol 2023-09-16T22:25:07,858 creating build/lib.linux-armv7l-cpython-311/biotite/structure/io/pdbx 2023-09-16T22:25:07,859 copying src/biotite/structure/io/pdbx/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/pdbx 2023-09-16T22:25:07,862 copying src/biotite/structure/io/pdbx/convert.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/pdbx 2023-09-16T22:25:07,865 copying src/biotite/structure/io/pdbx/file.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/pdbx 2023-09-16T22:25:07,868 creating build/lib.linux-armv7l-cpython-311/biotite/structure/io/npz 2023-09-16T22:25:07,869 copying src/biotite/structure/io/npz/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/npz 2023-09-16T22:25:07,871 copying src/biotite/structure/io/npz/file.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/npz 2023-09-16T22:25:07,874 creating build/lib.linux-armv7l-cpython-311/biotite/structure/io/xtc 2023-09-16T22:25:07,875 copying src/biotite/structure/io/xtc/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/xtc 2023-09-16T22:25:07,877 copying src/biotite/structure/io/xtc/file.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/xtc 2023-09-16T22:25:07,880 creating build/lib.linux-armv7l-cpython-311/biotite/structure/io/pdb 2023-09-16T22:25:07,881 copying src/biotite/structure/io/pdb/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/pdb 2023-09-16T22:25:07,883 copying src/biotite/structure/io/pdb/convert.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/pdb 2023-09-16T22:25:07,885 copying src/biotite/structure/io/pdb/file.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/pdb 2023-09-16T22:25:07,889 creating build/lib.linux-armv7l-cpython-311/biotite/structure/io/dcd 2023-09-16T22:25:07,890 copying src/biotite/structure/io/dcd/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/dcd 2023-09-16T22:25:07,892 copying src/biotite/structure/io/dcd/file.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/dcd 2023-09-16T22:25:07,894 creating build/lib.linux-armv7l-cpython-311/biotite/structure/io/trr 2023-09-16T22:25:07,895 copying src/biotite/structure/io/trr/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/trr 2023-09-16T22:25:07,897 copying src/biotite/structure/io/trr/file.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/trr 2023-09-16T22:25:07,899 creating build/lib.linux-armv7l-cpython-311/biotite/structure/io/netcdf 2023-09-16T22:25:07,900 copying src/biotite/structure/io/netcdf/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/netcdf 2023-09-16T22:25:07,902 copying src/biotite/structure/io/netcdf/file.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/netcdf 2023-09-16T22:25:07,904 creating build/lib.linux-armv7l-cpython-311/biotite/structure/io/gro 2023-09-16T22:25:07,906 copying src/biotite/structure/io/gro/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/gro 2023-09-16T22:25:07,907 copying src/biotite/structure/io/gro/file.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/gro 2023-09-16T22:25:07,910 creating build/lib.linux-armv7l-cpython-311/biotite/structure/io/pdbqt 2023-09-16T22:25:07,912 copying src/biotite/structure/io/pdbqt/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/pdbqt 2023-09-16T22:25:07,913 copying src/biotite/structure/io/pdbqt/convert.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/pdbqt 2023-09-16T22:25:07,915 copying src/biotite/structure/io/pdbqt/file.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/pdbqt 2023-09-16T22:25:07,918 creating build/lib.linux-armv7l-cpython-311/biotite/structure/io/mmtf 2023-09-16T22:25:07,920 copying src/biotite/structure/io/mmtf/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/mmtf 2023-09-16T22:25:07,921 copying src/biotite/structure/io/mmtf/assembly.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/mmtf 2023-09-16T22:25:07,924 copying src/biotite/structure/io/mmtf/file.py -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/mmtf 2023-09-16T22:25:07,927 creating build/lib.linux-armv7l-cpython-311/biotite/sequence/align 2023-09-16T22:25:07,928 copying src/biotite/sequence/align/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align 2023-09-16T22:25:07,930 copying src/biotite/sequence/align/alignment.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align 2023-09-16T22:25:07,932 copying src/biotite/sequence/align/statistics.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align 2023-09-16T22:25:07,935 copying src/biotite/sequence/align/matrix.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align 2023-09-16T22:25:07,937 creating build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics 2023-09-16T22:25:07,938 copying src/biotite/sequence/graphics/colorschemes.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics 2023-09-16T22:25:07,941 copying src/biotite/sequence/graphics/features.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics 2023-09-16T22:25:07,943 copying src/biotite/sequence/graphics/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics 2023-09-16T22:25:07,945 copying src/biotite/sequence/graphics/logo.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics 2023-09-16T22:25:07,948 copying src/biotite/sequence/graphics/alignment.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics 2023-09-16T22:25:07,950 copying src/biotite/sequence/graphics/dendrogram.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics 2023-09-16T22:25:07,952 copying src/biotite/sequence/graphics/plasmid.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics 2023-09-16T22:25:07,955 creating build/lib.linux-armv7l-cpython-311/biotite/sequence/phylo 2023-09-16T22:25:07,956 copying src/biotite/sequence/phylo/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence/phylo 2023-09-16T22:25:07,958 creating build/lib.linux-armv7l-cpython-311/biotite/sequence/io 2023-09-16T22:25:07,959 copying src/biotite/sequence/io/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence/io 2023-09-16T22:25:07,961 copying src/biotite/sequence/io/general.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence/io 2023-09-16T22:25:07,964 creating build/lib.linux-armv7l-cpython-311/biotite/sequence/io/fastq 2023-09-16T22:25:07,965 copying src/biotite/sequence/io/fastq/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence/io/fastq 2023-09-16T22:25:07,967 copying src/biotite/sequence/io/fastq/convert.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence/io/fastq 2023-09-16T22:25:07,969 copying src/biotite/sequence/io/fastq/file.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence/io/fastq 2023-09-16T22:25:07,972 creating build/lib.linux-armv7l-cpython-311/biotite/sequence/io/genbank 2023-09-16T22:25:07,973 copying src/biotite/sequence/io/genbank/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence/io/genbank 2023-09-16T22:25:07,975 copying src/biotite/sequence/io/genbank/sequence.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence/io/genbank 2023-09-16T22:25:07,978 copying src/biotite/sequence/io/genbank/file.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence/io/genbank 2023-09-16T22:25:07,980 copying src/biotite/sequence/io/genbank/metadata.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence/io/genbank 2023-09-16T22:25:07,982 copying src/biotite/sequence/io/genbank/annotation.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence/io/genbank 2023-09-16T22:25:07,985 creating build/lib.linux-armv7l-cpython-311/biotite/sequence/io/gff 2023-09-16T22:25:07,986 copying src/biotite/sequence/io/gff/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence/io/gff 2023-09-16T22:25:07,989 copying src/biotite/sequence/io/gff/convert.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence/io/gff 2023-09-16T22:25:07,991 copying src/biotite/sequence/io/gff/file.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence/io/gff 2023-09-16T22:25:07,993 creating build/lib.linux-armv7l-cpython-311/biotite/sequence/io/fasta 2023-09-16T22:25:07,994 copying src/biotite/sequence/io/fasta/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence/io/fasta 2023-09-16T22:25:07,997 copying src/biotite/sequence/io/fasta/convert.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence/io/fasta 2023-09-16T22:25:07,999 copying src/biotite/sequence/io/fasta/file.py -> build/lib.linux-armv7l-cpython-311/biotite/sequence/io/fasta 2023-09-16T22:25:08,002 creating build/lib.linux-armv7l-cpython-311/biotite/database/pubchem 2023-09-16T22:25:08,003 copying src/biotite/database/pubchem/query.py -> build/lib.linux-armv7l-cpython-311/biotite/database/pubchem 2023-09-16T22:25:08,006 copying src/biotite/database/pubchem/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/database/pubchem 2023-09-16T22:25:08,008 copying src/biotite/database/pubchem/error.py -> build/lib.linux-armv7l-cpython-311/biotite/database/pubchem 2023-09-16T22:25:08,010 copying src/biotite/database/pubchem/download.py -> build/lib.linux-armv7l-cpython-311/biotite/database/pubchem 2023-09-16T22:25:08,012 copying src/biotite/database/pubchem/throttle.py -> build/lib.linux-armv7l-cpython-311/biotite/database/pubchem 2023-09-16T22:25:08,015 creating build/lib.linux-armv7l-cpython-311/biotite/database/entrez 2023-09-16T22:25:08,016 copying src/biotite/database/entrez/query.py -> build/lib.linux-armv7l-cpython-311/biotite/database/entrez 2023-09-16T22:25:08,018 copying src/biotite/database/entrez/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/database/entrez 2023-09-16T22:25:08,020 copying src/biotite/database/entrez/dbnames.py -> build/lib.linux-armv7l-cpython-311/biotite/database/entrez 2023-09-16T22:25:08,022 copying src/biotite/database/entrez/check.py -> build/lib.linux-armv7l-cpython-311/biotite/database/entrez 2023-09-16T22:25:08,023 copying src/biotite/database/entrez/download.py -> build/lib.linux-armv7l-cpython-311/biotite/database/entrez 2023-09-16T22:25:08,026 creating build/lib.linux-armv7l-cpython-311/biotite/database/uniprot 2023-09-16T22:25:08,027 copying src/biotite/database/uniprot/query.py -> build/lib.linux-armv7l-cpython-311/biotite/database/uniprot 2023-09-16T22:25:08,029 copying src/biotite/database/uniprot/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/database/uniprot 2023-09-16T22:25:08,031 copying src/biotite/database/uniprot/check.py -> build/lib.linux-armv7l-cpython-311/biotite/database/uniprot 2023-09-16T22:25:08,033 copying src/biotite/database/uniprot/download.py -> build/lib.linux-armv7l-cpython-311/biotite/database/uniprot 2023-09-16T22:25:08,036 creating build/lib.linux-armv7l-cpython-311/biotite/database/rcsb 2023-09-16T22:25:08,036 copying src/biotite/database/rcsb/query.py -> build/lib.linux-armv7l-cpython-311/biotite/database/rcsb 2023-09-16T22:25:08,040 copying src/biotite/database/rcsb/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/database/rcsb 2023-09-16T22:25:08,041 copying src/biotite/database/rcsb/download.py -> build/lib.linux-armv7l-cpython-311/biotite/database/rcsb 2023-09-16T22:25:08,044 creating build/lib.linux-armv7l-cpython-311/biotite/application/mafft 2023-09-16T22:25:08,045 copying src/biotite/application/mafft/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/application/mafft 2023-09-16T22:25:08,047 copying src/biotite/application/mafft/app.py -> build/lib.linux-armv7l-cpython-311/biotite/application/mafft 2023-09-16T22:25:08,049 creating build/lib.linux-armv7l-cpython-311/biotite/application/sra 2023-09-16T22:25:08,050 copying src/biotite/application/sra/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/application/sra 2023-09-16T22:25:08,052 copying src/biotite/application/sra/app.py -> build/lib.linux-armv7l-cpython-311/biotite/application/sra 2023-09-16T22:25:08,054 creating build/lib.linux-armv7l-cpython-311/biotite/application/clustalo 2023-09-16T22:25:08,055 copying src/biotite/application/clustalo/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/application/clustalo 2023-09-16T22:25:08,057 copying src/biotite/application/clustalo/app.py -> build/lib.linux-armv7l-cpython-311/biotite/application/clustalo 2023-09-16T22:25:08,060 creating build/lib.linux-armv7l-cpython-311/biotite/application/dssp 2023-09-16T22:25:08,061 copying src/biotite/application/dssp/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/application/dssp 2023-09-16T22:25:08,063 copying src/biotite/application/dssp/app.py -> build/lib.linux-armv7l-cpython-311/biotite/application/dssp 2023-09-16T22:25:08,065 creating build/lib.linux-armv7l-cpython-311/biotite/application/viennarna 2023-09-16T22:25:08,066 copying src/biotite/application/viennarna/rnafold.py -> build/lib.linux-armv7l-cpython-311/biotite/application/viennarna 2023-09-16T22:25:08,069 copying src/biotite/application/viennarna/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/application/viennarna 2023-09-16T22:25:08,071 copying src/biotite/application/viennarna/rnaplot.py -> build/lib.linux-armv7l-cpython-311/biotite/application/viennarna 2023-09-16T22:25:08,073 copying src/biotite/application/viennarna/rnaalifold.py -> build/lib.linux-armv7l-cpython-311/biotite/application/viennarna 2023-09-16T22:25:08,075 copying src/biotite/application/viennarna/util.py -> build/lib.linux-armv7l-cpython-311/biotite/application/viennarna 2023-09-16T22:25:08,078 creating build/lib.linux-armv7l-cpython-311/biotite/application/blast 2023-09-16T22:25:08,078 copying src/biotite/application/blast/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/application/blast 2023-09-16T22:25:08,080 copying src/biotite/application/blast/webapp.py -> build/lib.linux-armv7l-cpython-311/biotite/application/blast 2023-09-16T22:25:08,083 copying src/biotite/application/blast/alignment.py -> build/lib.linux-armv7l-cpython-311/biotite/application/blast 2023-09-16T22:25:08,085 creating build/lib.linux-armv7l-cpython-311/biotite/application/autodock 2023-09-16T22:25:08,086 copying src/biotite/application/autodock/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/application/autodock 2023-09-16T22:25:08,088 copying src/biotite/application/autodock/app.py -> build/lib.linux-armv7l-cpython-311/biotite/application/autodock 2023-09-16T22:25:08,091 creating build/lib.linux-armv7l-cpython-311/biotite/application/tantan 2023-09-16T22:25:08,092 copying src/biotite/application/tantan/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/application/tantan 2023-09-16T22:25:08,094 copying src/biotite/application/tantan/app.py -> build/lib.linux-armv7l-cpython-311/biotite/application/tantan 2023-09-16T22:25:08,097 creating build/lib.linux-armv7l-cpython-311/biotite/application/muscle 2023-09-16T22:25:08,097 copying src/biotite/application/muscle/app3.py -> build/lib.linux-armv7l-cpython-311/biotite/application/muscle 2023-09-16T22:25:08,100 copying src/biotite/application/muscle/__init__.py -> build/lib.linux-armv7l-cpython-311/biotite/application/muscle 2023-09-16T22:25:08,102 copying src/biotite/application/muscle/app5.py -> build/lib.linux-armv7l-cpython-311/biotite/application/muscle 2023-09-16T22:25:08,104 running egg_info 2023-09-16T22:25:08,109 writing src/biotite.egg-info/PKG-INFO 2023-09-16T22:25:08,113 writing dependency_links to src/biotite.egg-info/dependency_links.txt 2023-09-16T22:25:08,114 writing requirements to src/biotite.egg-info/requires.txt 2023-09-16T22:25:08,115 writing top-level names to src/biotite.egg-info/top_level.txt 2023-09-16T22:25:08,176 reading manifest file 'src/biotite.egg-info/SOURCES.txt' 2023-09-16T22:25:08,184 reading manifest template 'MANIFEST.in' 2023-09-16T22:25:08,185 adding license file 'LICENSE.rst' 2023-09-16T22:25:08,199 writing manifest file 'src/biotite.egg-info/SOURCES.txt' 2023-09-16T22:25:08,203 /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'biotite.sequence.align.matrix_data' is absent from the `packages` configuration. 2023-09-16T22:25:08,204 !! 2023-09-16T22:25:08,206 ******************************************************************************** 2023-09-16T22:25:08,206 ############################ 2023-09-16T22:25:08,207 # Package would be ignored # 2023-09-16T22:25:08,208 ############################ 2023-09-16T22:25:08,209 Python recognizes 'biotite.sequence.align.matrix_data' as an importable package[^1], 2023-09-16T22:25:08,209 but it is absent from setuptools' `packages` configuration. 2023-09-16T22:25:08,211 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-16T22:25:08,211 package, please make sure that 'biotite.sequence.align.matrix_data' is explicitly added 2023-09-16T22:25:08,212 to the `packages` configuration field. 2023-09-16T22:25:08,214 Alternatively, you can also rely on setuptools' discovery methods 2023-09-16T22:25:08,214 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-16T22:25:08,215 instead of `find_packages(...)`/`find:`). 2023-09-16T22:25:08,216 You can read more about "package discovery" on setuptools documentation page: 2023-09-16T22:25:08,218 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-16T22:25:08,219 If you don't want 'biotite.sequence.align.matrix_data' to be distributed and are 2023-09-16T22:25:08,220 already explicitly excluding 'biotite.sequence.align.matrix_data' via 2023-09-16T22:25:08,220 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-16T22:25:08,221 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-16T22:25:08,222 combination with a more fine grained `package-data` configuration. 2023-09-16T22:25:08,223 You can read more about "package data files" on setuptools documentation page: 2023-09-16T22:25:08,224 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-16T22:25:08,226 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-16T22:25:08,227 even if it does not contain any `.py` files. 2023-09-16T22:25:08,228 On the other hand, currently there is no concept of package data 2023-09-16T22:25:08,229 directory, all directories are treated like packages. 2023-09-16T22:25:08,229 ******************************************************************************** 2023-09-16T22:25:08,231 !! 2023-09-16T22:25:08,231 check.warn(importable) 2023-09-16T22:25:08,232 /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'biotite.sequence.graphics.color_schemes' is absent from the `packages` configuration. 2023-09-16T22:25:08,233 !! 2023-09-16T22:25:08,235 ******************************************************************************** 2023-09-16T22:25:08,236 ############################ 2023-09-16T22:25:08,236 # Package would be ignored # 2023-09-16T22:25:08,237 ############################ 2023-09-16T22:25:08,238 Python recognizes 'biotite.sequence.graphics.color_schemes' as an importable package[^1], 2023-09-16T22:25:08,238 but it is absent from setuptools' `packages` configuration. 2023-09-16T22:25:08,240 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-16T22:25:08,241 package, please make sure that 'biotite.sequence.graphics.color_schemes' is explicitly added 2023-09-16T22:25:08,242 to the `packages` configuration field. 2023-09-16T22:25:08,243 Alternatively, you can also rely on setuptools' discovery methods 2023-09-16T22:25:08,244 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-16T22:25:08,245 instead of `find_packages(...)`/`find:`). 2023-09-16T22:25:08,246 You can read more about "package discovery" on setuptools documentation page: 2023-09-16T22:25:08,249 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-16T22:25:08,273 If you don't want 'biotite.sequence.graphics.color_schemes' to be distributed and are 2023-09-16T22:25:08,277 already explicitly excluding 'biotite.sequence.graphics.color_schemes' via 2023-09-16T22:25:08,278 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-16T22:25:08,279 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-16T22:25:08,279 combination with a more fine grained `package-data` configuration. 2023-09-16T22:25:08,281 You can read more about "package data files" on setuptools documentation page: 2023-09-16T22:25:08,283 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-16T22:25:08,284 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-16T22:25:08,284 even if it does not contain any `.py` files. 2023-09-16T22:25:08,285 On the other hand, currently there is no concept of package data 2023-09-16T22:25:08,285 directory, all directories are treated like packages. 2023-09-16T22:25:08,286 ******************************************************************************** 2023-09-16T22:25:08,287 !! 2023-09-16T22:25:08,287 check.warn(importable) 2023-09-16T22:25:08,287 copying src/biotite/structure/bonds.c -> build/lib.linux-armv7l-cpython-311/biotite/structure 2023-09-16T22:25:08,288 copying src/biotite/structure/celllist.c -> build/lib.linux-armv7l-cpython-311/biotite/structure 2023-09-16T22:25:08,308 copying src/biotite/structure/charges.c -> build/lib.linux-armv7l-cpython-311/biotite/structure 2023-09-16T22:25:08,332 copying src/biotite/structure/sasa.c -> build/lib.linux-armv7l-cpython-311/biotite/structure 2023-09-16T22:25:08,363 copying src/biotite/sequence/codec.c -> build/lib.linux-armv7l-cpython-311/biotite/sequence 2023-09-16T22:25:08,386 copying src/biotite/sequence/codon_tables.txt -> build/lib.linux-armv7l-cpython-311/biotite/sequence 2023-09-16T22:25:08,390 copying src/biotite/structure/info/amino_acids.json -> build/lib.linux-armv7l-cpython-311/biotite/structure/info 2023-09-16T22:25:08,392 copying src/biotite/structure/info/atom_masses.json -> build/lib.linux-armv7l-cpython-311/biotite/structure/info 2023-09-16T22:25:08,394 copying src/biotite/structure/info/carbohydrates.json -> build/lib.linux-armv7l-cpython-311/biotite/structure/info 2023-09-16T22:25:08,397 copying src/biotite/structure/info/intra_bonds.msgpack -> build/lib.linux-armv7l-cpython-311/biotite/structure/info 2023-09-16T22:25:08,658 copying src/biotite/structure/info/link_types.msgpack -> build/lib.linux-armv7l-cpython-311/biotite/structure/info 2023-09-16T22:25:08,669 copying src/biotite/structure/info/nucleotides.json -> build/lib.linux-armv7l-cpython-311/biotite/structure/info 2023-09-16T22:25:08,672 copying src/biotite/structure/info/residue_masses.msgpack -> build/lib.linux-armv7l-cpython-311/biotite/structure/info 2023-09-16T22:25:08,681 copying src/biotite/structure/info/residue_names.msgpack -> build/lib.linux-armv7l-cpython-311/biotite/structure/info 2023-09-16T22:25:08,727 copying src/biotite/structure/info/residues.msgpack -> build/lib.linux-armv7l-cpython-311/biotite/structure/info 2023-09-16T22:25:10,545 copying src/biotite/structure/io/pdb/hybrid36.c -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/pdb 2023-09-16T22:25:10,563 copying src/biotite/structure/io/mmtf/convertarray.c -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/mmtf 2023-09-16T22:25:10,576 copying src/biotite/structure/io/mmtf/convertfile.c -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/mmtf 2023-09-16T22:25:10,607 copying src/biotite/structure/io/mmtf/decode.c -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/mmtf 2023-09-16T22:25:10,633 copying src/biotite/structure/io/mmtf/encode.c -> build/lib.linux-armv7l-cpython-311/biotite/structure/io/mmtf 2023-09-16T22:25:10,657 copying src/biotite/sequence/align/banded.c -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align 2023-09-16T22:25:10,696 copying src/biotite/sequence/align/kmeralphabet.c -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align 2023-09-16T22:25:10,734 copying src/biotite/sequence/align/kmersimilarity.c -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align 2023-09-16T22:25:10,757 copying src/biotite/sequence/align/kmertable.c -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align 2023-09-16T22:25:10,793 copying src/biotite/sequence/align/localgapped.c -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align 2023-09-16T22:25:10,862 copying src/biotite/sequence/align/localungapped.c -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align 2023-09-16T22:25:10,889 copying src/biotite/sequence/align/multiple.c -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align 2023-09-16T22:25:10,925 copying src/biotite/sequence/align/pairwise.c -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align 2023-09-16T22:25:10,971 copying src/biotite/sequence/align/tracetable.c -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align 2023-09-16T22:25:10,993 creating build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:10,994 copying src/biotite/sequence/align/matrix_data/BLOSUM100.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:10,997 copying src/biotite/sequence/align/matrix_data/BLOSUM30.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,000 copying src/biotite/sequence/align/matrix_data/BLOSUM35.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,002 copying src/biotite/sequence/align/matrix_data/BLOSUM40.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,005 copying src/biotite/sequence/align/matrix_data/BLOSUM45.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,007 copying src/biotite/sequence/align/matrix_data/BLOSUM50.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,009 copying src/biotite/sequence/align/matrix_data/BLOSUM50_13p.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,011 copying src/biotite/sequence/align/matrix_data/BLOSUM50_14.3.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,014 copying src/biotite/sequence/align/matrix_data/BLOSUM50_5.0.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,016 copying src/biotite/sequence/align/matrix_data/BLOSUM55.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,018 copying src/biotite/sequence/align/matrix_data/BLOSUM60.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,021 copying src/biotite/sequence/align/matrix_data/BLOSUM62.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,023 copying src/biotite/sequence/align/matrix_data/BLOSUM62_13p.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,025 copying src/biotite/sequence/align/matrix_data/BLOSUM62_14.3.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,027 copying src/biotite/sequence/align/matrix_data/BLOSUM62_5.0.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,029 copying src/biotite/sequence/align/matrix_data/BLOSUM65.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,032 copying src/biotite/sequence/align/matrix_data/BLOSUM70.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,034 copying src/biotite/sequence/align/matrix_data/BLOSUM75.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,036 copying src/biotite/sequence/align/matrix_data/BLOSUM80.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,038 copying src/biotite/sequence/align/matrix_data/BLOSUM85.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,040 copying src/biotite/sequence/align/matrix_data/BLOSUM90.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,042 copying src/biotite/sequence/align/matrix_data/BLOSUMN.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,044 copying src/biotite/sequence/align/matrix_data/CorBLOSUM49_5.0.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,046 copying src/biotite/sequence/align/matrix_data/CorBLOSUM57_13p.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,049 copying src/biotite/sequence/align/matrix_data/CorBLOSUM57_14.3.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,051 copying src/biotite/sequence/align/matrix_data/CorBLOSUM61_5.0.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,053 copying src/biotite/sequence/align/matrix_data/CorBLOSUM66_13p.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,055 copying src/biotite/sequence/align/matrix_data/CorBLOSUM67_14.3.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,057 copying src/biotite/sequence/align/matrix_data/DAYHOFF.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,059 copying src/biotite/sequence/align/matrix_data/GONNET.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,062 copying src/biotite/sequence/align/matrix_data/IDENTITY.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,064 copying src/biotite/sequence/align/matrix_data/MATCH.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,066 copying src/biotite/sequence/align/matrix_data/NUC.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,068 copying src/biotite/sequence/align/matrix_data/PAM10.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,070 copying src/biotite/sequence/align/matrix_data/PAM100.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,072 copying src/biotite/sequence/align/matrix_data/PAM110.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,074 copying src/biotite/sequence/align/matrix_data/PAM120.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,076 copying src/biotite/sequence/align/matrix_data/PAM130.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,078 copying src/biotite/sequence/align/matrix_data/PAM140.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,081 copying src/biotite/sequence/align/matrix_data/PAM150.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,083 copying src/biotite/sequence/align/matrix_data/PAM160.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,085 copying src/biotite/sequence/align/matrix_data/PAM170.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,087 copying src/biotite/sequence/align/matrix_data/PAM180.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,090 copying src/biotite/sequence/align/matrix_data/PAM190.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,092 copying src/biotite/sequence/align/matrix_data/PAM20.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,094 copying src/biotite/sequence/align/matrix_data/PAM200.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,096 copying src/biotite/sequence/align/matrix_data/PAM210.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,098 copying src/biotite/sequence/align/matrix_data/PAM220.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,100 copying src/biotite/sequence/align/matrix_data/PAM230.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,102 copying src/biotite/sequence/align/matrix_data/PAM240.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,104 copying src/biotite/sequence/align/matrix_data/PAM250.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,106 copying src/biotite/sequence/align/matrix_data/PAM260.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,108 copying src/biotite/sequence/align/matrix_data/PAM270.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,110 copying src/biotite/sequence/align/matrix_data/PAM280.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,112 copying src/biotite/sequence/align/matrix_data/PAM290.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,114 copying src/biotite/sequence/align/matrix_data/PAM30.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,116 copying src/biotite/sequence/align/matrix_data/PAM300.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,119 copying src/biotite/sequence/align/matrix_data/PAM310.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,121 copying src/biotite/sequence/align/matrix_data/PAM320.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,123 copying src/biotite/sequence/align/matrix_data/PAM330.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,125 copying src/biotite/sequence/align/matrix_data/PAM340.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,127 copying src/biotite/sequence/align/matrix_data/PAM350.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,129 copying src/biotite/sequence/align/matrix_data/PAM360.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,131 copying src/biotite/sequence/align/matrix_data/PAM370.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,133 copying src/biotite/sequence/align/matrix_data/PAM380.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,136 copying src/biotite/sequence/align/matrix_data/PAM390.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,138 copying src/biotite/sequence/align/matrix_data/PAM40.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,140 copying src/biotite/sequence/align/matrix_data/PAM400.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,142 copying src/biotite/sequence/align/matrix_data/PAM410.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,144 copying src/biotite/sequence/align/matrix_data/PAM420.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,146 copying src/biotite/sequence/align/matrix_data/PAM430.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,149 copying src/biotite/sequence/align/matrix_data/PAM440.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,151 copying src/biotite/sequence/align/matrix_data/PAM450.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,153 copying src/biotite/sequence/align/matrix_data/PAM460.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,155 copying src/biotite/sequence/align/matrix_data/PAM470.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,157 copying src/biotite/sequence/align/matrix_data/PAM480.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,160 copying src/biotite/sequence/align/matrix_data/PAM490.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,161 copying src/biotite/sequence/align/matrix_data/PAM50.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,164 copying src/biotite/sequence/align/matrix_data/PAM500.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,166 copying src/biotite/sequence/align/matrix_data/PAM60.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,168 copying src/biotite/sequence/align/matrix_data/PAM70.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,170 copying src/biotite/sequence/align/matrix_data/PAM80.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,172 copying src/biotite/sequence/align/matrix_data/PAM90.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,174 copying src/biotite/sequence/align/matrix_data/RBLOSUM52_5.0.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,176 copying src/biotite/sequence/align/matrix_data/RBLOSUM59_13p.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,179 copying src/biotite/sequence/align/matrix_data/RBLOSUM59_14.3.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,181 copying src/biotite/sequence/align/matrix_data/RBLOSUM64_5.0.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,183 copying src/biotite/sequence/align/matrix_data/RBLOSUM69_13p.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,185 copying src/biotite/sequence/align/matrix_data/RBLOSUM69_14.3.mat -> build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data 2023-09-16T22:25:11,187 creating build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes 2023-09-16T22:25:11,188 copying src/biotite/sequence/graphics/color_schemes/autumn.json -> build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes 2023-09-16T22:25:11,191 copying src/biotite/sequence/graphics/color_schemes/blossom.json -> build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes 2023-09-16T22:25:11,193 copying src/biotite/sequence/graphics/color_schemes/clustalx_dna.json -> build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes 2023-09-16T22:25:11,195 copying src/biotite/sequence/graphics/color_schemes/clustalx_protein.json -> build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes 2023-09-16T22:25:11,197 copying src/biotite/sequence/graphics/color_schemes/flower.json -> build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes 2023-09-16T22:25:11,199 copying src/biotite/sequence/graphics/color_schemes/jalview_buried.json -> build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes 2023-09-16T22:25:11,201 copying src/biotite/sequence/graphics/color_schemes/jalview_hydrophobicity.json -> build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes 2023-09-16T22:25:11,203 copying src/biotite/sequence/graphics/color_schemes/jalview_prop_helix.json -> build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes 2023-09-16T22:25:11,206 copying src/biotite/sequence/graphics/color_schemes/jalview_prop_strand.json -> build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes 2023-09-16T22:25:11,208 copying src/biotite/sequence/graphics/color_schemes/jalview_prop_turn.json -> build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes 2023-09-16T22:25:11,210 copying src/biotite/sequence/graphics/color_schemes/jalview_taylor.json -> build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes 2023-09-16T22:25:11,212 copying src/biotite/sequence/graphics/color_schemes/jalview_zappo.json -> build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes 2023-09-16T22:25:11,214 copying src/biotite/sequence/graphics/color_schemes/ocean.json -> build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes 2023-09-16T22:25:11,216 copying src/biotite/sequence/graphics/color_schemes/pb_flower.json -> build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes 2023-09-16T22:25:11,218 copying src/biotite/sequence/graphics/color_schemes/rainbow_dna.json -> build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes 2023-09-16T22:25:11,220 copying src/biotite/sequence/graphics/color_schemes/rainbow_protein.json -> build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes 2023-09-16T22:25:11,222 copying src/biotite/sequence/graphics/color_schemes/spring.json -> build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes 2023-09-16T22:25:11,224 copying src/biotite/sequence/graphics/color_schemes/sunset.json -> build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes 2023-09-16T22:25:11,227 copying src/biotite/sequence/graphics/color_schemes/wither.json -> build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes 2023-09-16T22:25:11,228 copying src/biotite/sequence/phylo/nj.c -> build/lib.linux-armv7l-cpython-311/biotite/sequence/phylo 2023-09-16T22:25:11,249 copying src/biotite/sequence/phylo/tree.c -> build/lib.linux-armv7l-cpython-311/biotite/sequence/phylo 2023-09-16T22:25:11,272 copying src/biotite/sequence/phylo/upgma.c -> build/lib.linux-armv7l-cpython-311/biotite/sequence/phylo 2023-09-16T22:25:11,311 running build_ext 2023-09-16T22:25:11,316 building 'biotite.structure.charges' extension 2023-09-16T22:25:11,317 creating build/temp.linux-armv7l-cpython-311 2023-09-16T22:25:11,318 creating build/temp.linux-armv7l-cpython-311/src 2023-09-16T22:25:11,319 creating build/temp.linux-armv7l-cpython-311/src/biotite 2023-09-16T22:25:11,320 creating build/temp.linux-armv7l-cpython-311/src/biotite/structure 2023-09-16T22:25:11,321 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/biotite/structure/charges.c -o build/temp.linux-armv7l-cpython-311/src/biotite/structure/charges.o 2023-09-16T22:25:11,713 In file included from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-09-16T22:25:11,714 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-16T22:25:11,715 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-16T22:25:11,715 from src/biotite/structure/charges.c:1167: 2023-09-16T22:25:11,716 /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-16T22:25:11,717 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-16T22:25:11,718 | ^~~~~~~ 2023-09-16T22:25:12,125 src/biotite/structure/charges.c: In function ‘__pyx_pf_7biotite_9structure_7charges__get_parameters’: 2023-09-16T22:25:12,143 src/biotite/structure/charges.c:20620:161: warning: comparison of integer expressions of different signedness: ‘__pyx_t_7biotite_9structure_7charges_int8’ {aka ‘signed char’} and ‘__pyx_t_7biotite_9structure_7charges_uint32’ {aka ‘long unsigned int’} [-Wsign-compare] 2023-09-16T22:25:12,144 20620 | __pyx_t_14 = ((*((__pyx_t_7biotite_9structure_7charges_int8 *) ( /* dim=0 */ (__pyx_v_bond_types_v.data + __pyx_t_12 * __pyx_v_bond_types_v.strides[0]) ))) == __pyx_v_7biotite_9structure_7charges_ANY); 2023-09-16T22:25:12,146 | ^~ 2023-09-16T22:25:52,442 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/biotite/structure/charges.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/biotite/structure/charges.cpython-311-arm-linux-gnueabihf.so 2023-09-16T22:25:52,588 building 'biotite.structure.bonds' extension 2023-09-16T22:25:52,589 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/biotite/structure/bonds.c -o build/temp.linux-armv7l-cpython-311/src/biotite/structure/bonds.o 2023-09-16T22:25:52,979 In file included from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-09-16T22:25:52,980 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-16T22:25:52,981 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-16T22:25:52,982 from src/biotite/structure/bonds.c:1167: 2023-09-16T22:25:52,982 /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-16T22:25:52,983 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-16T22:25:52,984 | ^~~~~~~ 2023-09-16T22:25:53,959 src/biotite/structure/bonds.c: In function ‘__pyx_pf_7biotite_9structure_5bonds_8BondList_54_remove_redundant_bonds’: 2023-09-16T22:25:53,988 src/biotite/structure/bonds.c:32102:66: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 2023-09-16T22:25:53,989 32102 | __pyx_t_17 = __pyx_f_7biotite_9structure_5bonds__in_array(((__pyx_t_7biotite_9structure_5bonds_uint32 *)(*((__pyx_t_7biotite_9structure_5bonds_ptr *) ( /* dim=0 */ (__pyx_v_ptrs_v.data + __pyx_t_15 * __pyx_v_ptrs_v.strides[0]) )))), __pyx_v_i2, (*((int *) ( /* dim=0 */ (__pyx_v_array_len_v.data + __pyx_t_16 * __pyx_v_array_len_v.strides[0]) )))); if (unlikely(__pyx_t_17 == ((int)-1) && PyErr_Occurred())) __PYX_ERR(0, 1200, __pyx_L4_error) 2023-09-16T22:25:53,990 | ^ 2023-09-16T22:25:54,019 src/biotite/structure/bonds.c:32144:30: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 2023-09-16T22:25:54,020 32144 | __pyx_v_array_ptr = ((__pyx_t_7biotite_9structure_5bonds_uint32 *)(*((__pyx_t_7biotite_9structure_5bonds_ptr *) ( /* dim=0 */ (__pyx_v_ptrs_v.data + __pyx_t_16 * __pyx_v_ptrs_v.strides[0]) )))); 2023-09-16T22:25:54,020 | ^ 2023-09-16T22:25:54,050 src/biotite/structure/bonds.c:32200:137: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 2023-09-16T22:25:54,051 32200 | *((__pyx_t_7biotite_9structure_5bonds_ptr *) ( /* dim=0 */ (__pyx_v_ptrs_v.data + __pyx_t_16 * __pyx_v_ptrs_v.strides[0]) )) = ((__pyx_t_7biotite_9structure_5bonds_ptr)__pyx_v_array_ptr); 2023-09-16T22:25:54,052 | ^ 2023-09-16T22:25:54,081 src/biotite/structure/bonds.c:32238:15: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 2023-09-16T22:25:54,082 32238 | free(((int *)(*((__pyx_t_7biotite_9structure_5bonds_ptr *) ( /* dim=0 */ (__pyx_v_ptrs_v.data + __pyx_t_13 * __pyx_v_ptrs_v.strides[0]) ))))); 2023-09-16T22:25:54,082 | ^ 2023-09-16T22:25:54,119 src/biotite/structure/bonds.c:32291:17: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 2023-09-16T22:25:54,120 32291 | free(((int *)(*((__pyx_t_7biotite_9structure_5bonds_ptr *) ( /* dim=0 */ (__pyx_v_ptrs_v.data + __pyx_t_13 * __pyx_v_ptrs_v.strides[0]) ))))); 2023-09-16T22:25:54,120 | ^ 2023-09-16T22:25:54,876 src/biotite/structure/bonds.c: In function ‘__pyx_pf_7biotite_9structure_5bonds_4_to_bool_mask’: 2023-09-16T22:25:54,910 src/biotite/structure/bonds.c:37706:28: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘__pyx_t_7biotite_9structure_5bonds_uint32’ {aka ‘long unsigned int’} [-Wsign-compare] 2023-09-16T22:25:54,911 37706 | __pyx_t_1 = (__pyx_t_5 != __pyx_v_length); 2023-09-16T22:25:54,912 | ^~ 2023-09-16T22:27:35,495 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/biotite/structure/bonds.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/biotite/structure/bonds.cpython-311-arm-linux-gnueabihf.so 2023-09-16T22:27:35,682 building 'biotite.structure.sasa' extension 2023-09-16T22:27:35,684 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/biotite/structure/sasa.c -o build/temp.linux-armv7l-cpython-311/src/biotite/structure/sasa.o 2023-09-16T22:27:36,071 In file included from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-09-16T22:27:36,071 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-16T22:27:36,072 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-16T22:27:36,073 from src/biotite/structure/sasa.c:1167: 2023-09-16T22:27:36,074 /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-16T22:27:36,075 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-16T22:27:36,076 | ^~~~~~~ 2023-09-16T22:28:13,212 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/biotite/structure/sasa.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/biotite/structure/sasa.cpython-311-arm-linux-gnueabihf.so 2023-09-16T22:28:13,359 building 'biotite.structure.celllist' extension 2023-09-16T22:28:13,360 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/biotite/structure/celllist.c -o build/temp.linux-armv7l-cpython-311/src/biotite/structure/celllist.o 2023-09-16T22:28:13,744 In file included from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-09-16T22:28:13,744 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-16T22:28:13,745 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-16T22:28:13,746 from src/biotite/structure/celllist.c:1167: 2023-09-16T22:28:13,747 /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-16T22:28:13,748 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-16T22:28:13,749 | ^~~~~~~ 2023-09-16T22:28:14,178 src/biotite/structure/celllist.c: In function ‘__pyx_pf_7biotite_9structure_8celllist_8CellList___cinit__’: 2023-09-16T22:28:14,197 src/biotite/structure/celllist.c:21734:27: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 2023-09-16T22:28:14,198 21734 | __pyx_v_cell_ptr = ((int *)(*((__pyx_t_7biotite_9structure_8celllist_ptr *) ( /* dim=2 */ (( /* dim=1 */ (( /* dim=0 */ (__pyx_v_self->_cells.data + __pyx_t_20 * __pyx_v_self->_cells.strides[0]) ) + __pyx_t_18 * __pyx_v_self->_cells.strides[1]) ) + __pyx_t_19 * __pyx_v_self->_cells.strides[2]) )))); 2023-09-16T22:28:14,199 | ^ 2023-09-16T22:28:14,218 src/biotite/structure/celllist.c:21832:280: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 2023-09-16T22:28:14,219 21832 | *((__pyx_t_7biotite_9structure_8celllist_ptr *) ( /* dim=2 */ (( /* dim=1 */ (( /* dim=0 */ (__pyx_v_self->_cells.data + __pyx_t_20 * __pyx_v_self->_cells.strides[0]) ) + __pyx_t_18 * __pyx_v_self->_cells.strides[1]) ) + __pyx_t_19 * __pyx_v_self->_cells.strides[2]) )) = ((__pyx_t_7biotite_9structure_8celllist_ptr)__pyx_v_cell_ptr); 2023-09-16T22:28:14,221 | ^ 2023-09-16T22:28:14,382 src/biotite/structure/celllist.c: In function ‘__pyx_f_7biotite_9structure_8celllist_8CellList__find_adjacent_atoms’: 2023-09-16T22:28:14,404 src/biotite/structure/celllist.c:24901:37: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 2023-09-16T22:28:14,405 24901 | __pyx_v_list_ptr = ((int *)(*((__pyx_t_7biotite_9structure_8celllist_ptr *) ( /* dim=2 */ (( /* dim=1 */ (( /* dim=0 */ (__pyx_v_cells.data + __pyx_t_7 * __pyx_v_cells.strides[0]) ) + __pyx_t_6 * __pyx_v_cells.strides[1]) ) + __pyx_t_19 * __pyx_v_cells.strides[2]) )))); 2023-09-16T22:28:14,406 | ^ 2023-09-16T22:28:14,550 src/biotite/structure/celllist.c: In function ‘__pyx_f_7biotite_9structure_8celllist_deallocate_ptrs’: 2023-09-16T22:28:14,575 src/biotite/structure/celllist.c:27327:29: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 2023-09-16T22:28:14,576 27327 | __pyx_v_cell_ptr = ((int *)(*((__pyx_t_7biotite_9structure_8celllist_ptr *) ( /* dim=2 */ (( /* dim=1 */ (( /* dim=0 */ (__pyx_v_ptrs.data + __pyx_t_10 * __pyx_v_ptrs.strides[0]) ) + __pyx_t_11 * __pyx_v_ptrs.strides[1]) ) + __pyx_t_12 * __pyx_v_ptrs.strides[2]) )))); 2023-09-16T22:28:14,577 | ^ 2023-09-16T22:28:53,977 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/biotite/structure/celllist.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/biotite/structure/celllist.cpython-311-arm-linux-gnueabihf.so 2023-09-16T22:28:54,133 building 'biotite.structure.io.pdb.hybrid36' extension 2023-09-16T22:28:54,134 creating build/temp.linux-armv7l-cpython-311/src/biotite/structure/io 2023-09-16T22:28:54,135 creating build/temp.linux-armv7l-cpython-311/src/biotite/structure/io/pdb 2023-09-16T22:28:54,136 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/biotite/structure/io/pdb/hybrid36.c -o build/temp.linux-armv7l-cpython-311/src/biotite/structure/io/pdb/hybrid36.o 2023-09-16T22:29:17,323 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/biotite/structure/io/pdb/hybrid36.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/biotite/structure/io/pdb/hybrid36.cpython-311-arm-linux-gnueabihf.so 2023-09-16T22:29:17,453 building 'biotite.structure.io.mmtf.encode' extension 2023-09-16T22:29:17,454 creating build/temp.linux-armv7l-cpython-311/src/biotite/structure/io/mmtf 2023-09-16T22:29:17,455 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/biotite/structure/io/mmtf/encode.c -o build/temp.linux-armv7l-cpython-311/src/biotite/structure/io/mmtf/encode.o 2023-09-16T22:29:17,840 In file included from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-09-16T22:29:17,840 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-16T22:29:17,841 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-16T22:29:17,842 from src/biotite/structure/io/mmtf/encode.c:1167: 2023-09-16T22:29:17,843 /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-16T22:29:17,844 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-16T22:29:17,845 | ^~~~~~~ 2023-09-16T22:29:49,424 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/biotite/structure/io/mmtf/encode.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/biotite/structure/io/mmtf/encode.cpython-311-arm-linux-gnueabihf.so 2023-09-16T22:29:49,571 building 'biotite.structure.io.mmtf.convertfile' extension 2023-09-16T22:29:49,572 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/biotite/structure/io/mmtf/convertfile.c -o build/temp.linux-armv7l-cpython-311/src/biotite/structure/io/mmtf/convertfile.o 2023-09-16T22:29:49,965 In file included from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-09-16T22:29:49,966 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-16T22:29:49,967 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-16T22:29:49,968 from src/biotite/structure/io/mmtf/convertfile.c:1167: 2023-09-16T22:29:49,969 /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-16T22:29:49,970 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-16T22:29:49,971 | ^~~~~~~ 2023-09-16T22:30:45,571 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/biotite/structure/io/mmtf/convertfile.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/biotite/structure/io/mmtf/convertfile.cpython-311-arm-linux-gnueabihf.so 2023-09-16T22:30:45,720 building 'biotite.structure.io.mmtf.decode' extension 2023-09-16T22:30:45,721 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/biotite/structure/io/mmtf/decode.c -o build/temp.linux-armv7l-cpython-311/src/biotite/structure/io/mmtf/decode.o 2023-09-16T22:30:46,104 In file included from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-09-16T22:30:46,105 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-16T22:30:46,106 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-16T22:30:46,107 from src/biotite/structure/io/mmtf/decode.c:1167: 2023-09-16T22:30:46,108 /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-16T22:30:46,109 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-16T22:30:46,110 | ^~~~~~~ 2023-09-16T22:31:21,544 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/biotite/structure/io/mmtf/decode.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/biotite/structure/io/mmtf/decode.cpython-311-arm-linux-gnueabihf.so 2023-09-16T22:31:21,689 building 'biotite.structure.io.mmtf.convertarray' extension 2023-09-16T22:31:21,690 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/biotite/structure/io/mmtf/convertarray.c -o build/temp.linux-armv7l-cpython-311/src/biotite/structure/io/mmtf/convertarray.o 2023-09-16T22:31:22,068 In file included from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-09-16T22:31:22,069 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-16T22:31:22,070 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-16T22:31:22,071 from src/biotite/structure/io/mmtf/convertarray.c:1167: 2023-09-16T22:31:22,072 /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-16T22:31:22,073 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-16T22:31:22,074 | ^~~~~~~ 2023-09-16T22:31:48,904 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/biotite/structure/io/mmtf/convertarray.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/biotite/structure/io/mmtf/convertarray.cpython-311-arm-linux-gnueabihf.so 2023-09-16T22:31:49,028 building 'biotite.sequence.codec' extension 2023-09-16T22:31:49,029 creating build/temp.linux-armv7l-cpython-311/src/biotite/sequence 2023-09-16T22:31:49,030 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/biotite/sequence/codec.c -o build/temp.linux-armv7l-cpython-311/src/biotite/sequence/codec.o 2023-09-16T22:31:49,415 In file included from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-09-16T22:31:49,416 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-16T22:31:49,417 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-16T22:31:49,417 from src/biotite/sequence/codec.c:1167: 2023-09-16T22:31:49,418 /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-16T22:31:49,419 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-16T22:31:49,420 | ^~~~~~~ 2023-09-16T22:32:26,022 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/biotite/sequence/codec.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/biotite/sequence/codec.cpython-311-arm-linux-gnueabihf.so 2023-09-16T22:32:26,167 building 'biotite.sequence.align.banded' extension 2023-09-16T22:32:26,168 creating build/temp.linux-armv7l-cpython-311/src/biotite/sequence/align 2023-09-16T22:32:26,170 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/biotite/sequence/align/banded.c -o build/temp.linux-armv7l-cpython-311/src/biotite/sequence/align/banded.o 2023-09-16T22:32:26,559 In file included from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-09-16T22:32:26,560 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-16T22:32:26,561 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-16T22:32:26,561 from src/biotite/sequence/align/banded.c:1167: 2023-09-16T22:32:26,562 /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-16T22:32:26,563 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-16T22:32:26,564 | ^~~~~~~ 2023-09-16T22:33:47,087 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/biotite/sequence/align/banded.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/biotite/sequence/align/banded.cpython-311-arm-linux-gnueabihf.so 2023-09-16T22:33:47,274 building 'biotite.sequence.align.localgapped' extension 2023-09-16T22:33:47,275 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/biotite/sequence/align/localgapped.c -o build/temp.linux-armv7l-cpython-311/src/biotite/sequence/align/localgapped.o 2023-09-16T22:33:47,680 In file included from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-09-16T22:33:47,684 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-16T22:33:47,685 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-16T22:33:47,685 from src/biotite/sequence/align/localgapped.c:1167: 2023-09-16T22:33:47,686 /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-16T22:33:47,686 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-16T22:33:47,687 | ^~~~~~~ 2023-09-16T22:36:29,976 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/biotite/sequence/align/localgapped.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/biotite/sequence/align/localgapped.cpython-311-arm-linux-gnueabihf.so 2023-09-16T22:36:30,269 building 'biotite.sequence.align.localungapped' extension 2023-09-16T22:36:30,270 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/biotite/sequence/align/localungapped.c -o build/temp.linux-armv7l-cpython-311/src/biotite/sequence/align/localungapped.o 2023-09-16T22:36:30,654 In file included from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-09-16T22:36:30,655 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-16T22:36:30,656 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-16T22:36:30,657 from src/biotite/sequence/align/localungapped.c:1167: 2023-09-16T22:36:30,657 /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-16T22:36:30,658 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-16T22:36:30,659 | ^~~~~~~ 2023-09-16T22:37:10,988 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/biotite/sequence/align/localungapped.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/biotite/sequence/align/localungapped.cpython-311-arm-linux-gnueabihf.so 2023-09-16T22:37:11,139 building 'biotite.sequence.align.kmeralphabet' extension 2023-09-16T22:37:11,139 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/biotite/sequence/align/kmeralphabet.c -o build/temp.linux-armv7l-cpython-311/src/biotite/sequence/align/kmeralphabet.o 2023-09-16T22:37:11,524 In file included from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-09-16T22:37:11,525 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-16T22:37:11,526 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-16T22:37:11,527 from src/biotite/sequence/align/kmeralphabet.c:1167: 2023-09-16T22:37:11,528 /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-16T22:37:11,529 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-16T22:37:11,530 | ^~~~~~~ 2023-09-16T22:37:12,274 src/biotite/sequence/align/kmeralphabet.c: In function ‘__pyx_pf_7biotite_8sequence_5align_12kmeralphabet_12KmerAlphabet_38_create_continuous_kmers’: 2023-09-16T22:37:12,296 src/biotite/sequence/align/kmeralphabet.c:25836:26: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘unsigned int’ [-Wsign-compare] 2023-09-16T22:37:12,297 25836 | __pyx_t_5 = (__pyx_t_3 < ((unsigned int)__pyx_v_k)); 2023-09-16T22:37:12,298 | ^ 2023-09-16T22:37:12,331 src/biotite/sequence/align/kmeralphabet.c: In function ‘__pyx_pf_7biotite_8sequence_5align_12kmeralphabet_12KmerAlphabet_40_create_continuous_kmers’: 2023-09-16T22:37:12,354 src/biotite/sequence/align/kmeralphabet.c:26503:26: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘unsigned int’ [-Wsign-compare] 2023-09-16T22:37:12,355 26503 | __pyx_t_5 = (__pyx_t_3 < ((unsigned int)__pyx_v_k)); 2023-09-16T22:37:12,356 | ^ 2023-09-16T22:37:12,389 src/biotite/sequence/align/kmeralphabet.c: In function ‘__pyx_pf_7biotite_8sequence_5align_12kmeralphabet_12KmerAlphabet_42_create_continuous_kmers’: 2023-09-16T22:37:12,413 src/biotite/sequence/align/kmeralphabet.c:27170:26: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘unsigned int’ [-Wsign-compare] 2023-09-16T22:37:12,414 27170 | __pyx_t_5 = (__pyx_t_3 < ((unsigned int)__pyx_v_k)); 2023-09-16T22:37:12,415 | ^ 2023-09-16T22:37:12,449 src/biotite/sequence/align/kmeralphabet.c: In function ‘__pyx_pf_7biotite_8sequence_5align_12kmeralphabet_12KmerAlphabet_44_create_continuous_kmers’: 2023-09-16T22:37:12,473 src/biotite/sequence/align/kmeralphabet.c:27837:26: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘unsigned int’ [-Wsign-compare] 2023-09-16T22:37:12,474 27837 | __pyx_t_5 = (__pyx_t_3 < ((unsigned int)__pyx_v_k)); 2023-09-16T22:37:12,474 | ^ 2023-09-16T22:37:12,621 src/biotite/sequence/align/kmeralphabet.c: In function ‘__pyx_pf_7biotite_8sequence_5align_12kmeralphabet_12KmerAlphabet_48_create_spaced_kmers’: 2023-09-16T22:37:12,647 src/biotite/sequence/align/kmeralphabet.c:29567:26: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘unsigned int’ [-Wsign-compare] 2023-09-16T22:37:12,648 29567 | __pyx_t_6 = (__pyx_t_4 < ((unsigned int)__pyx_v_max_offset)); 2023-09-16T22:37:12,649 | ^ 2023-09-16T22:37:12,682 src/biotite/sequence/align/kmeralphabet.c: In function ‘__pyx_pf_7biotite_8sequence_5align_12kmeralphabet_12KmerAlphabet_50_create_spaced_kmers’: 2023-09-16T22:37:12,708 src/biotite/sequence/align/kmeralphabet.c:30129:26: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘unsigned int’ [-Wsign-compare] 2023-09-16T22:37:12,709 30129 | __pyx_t_6 = (__pyx_t_4 < ((unsigned int)__pyx_v_max_offset)); 2023-09-16T22:37:12,710 | ^ 2023-09-16T22:37:12,743 src/biotite/sequence/align/kmeralphabet.c: In function ‘__pyx_pf_7biotite_8sequence_5align_12kmeralphabet_12KmerAlphabet_52_create_spaced_kmers’: 2023-09-16T22:37:12,770 src/biotite/sequence/align/kmeralphabet.c:30691:26: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘unsigned int’ [-Wsign-compare] 2023-09-16T22:37:12,771 30691 | __pyx_t_6 = (__pyx_t_4 < ((unsigned int)__pyx_v_max_offset)); 2023-09-16T22:37:12,772 | ^ 2023-09-16T22:37:12,805 src/biotite/sequence/align/kmeralphabet.c: In function ‘__pyx_pf_7biotite_8sequence_5align_12kmeralphabet_12KmerAlphabet_54_create_spaced_kmers’: 2023-09-16T22:37:12,833 src/biotite/sequence/align/kmeralphabet.c:31253:26: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘unsigned int’ [-Wsign-compare] 2023-09-16T22:37:12,834 31253 | __pyx_t_6 = (__pyx_t_4 < ((unsigned int)__pyx_v_max_offset)); 2023-09-16T22:37:12,835 | ^ 2023-09-16T22:38:09,073 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/biotite/sequence/align/kmeralphabet.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/biotite/sequence/align/kmeralphabet.cpython-311-arm-linux-gnueabihf.so 2023-09-16T22:38:09,243 building 'biotite.sequence.align.kmertable' extension 2023-09-16T22:38:09,245 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/biotite/sequence/align/kmertable.c -o build/temp.linux-armv7l-cpython-311/src/biotite/sequence/align/kmertable.o 2023-09-16T22:38:09,668 In file included from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-09-16T22:38:09,669 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-16T22:38:09,670 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-16T22:38:09,671 from src/biotite/sequence/align/kmertable.c:1167: 2023-09-16T22:38:09,672 /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-16T22:38:09,673 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-16T22:38:09,674 | ^~~~~~~ 2023-09-16T22:38:10,458 src/biotite/sequence/align/kmertable.c: In function ‘__pyx_pf_7biotite_8sequence_5align_9kmertable_9KmerTable_8from_positions’: 2023-09-16T22:38:10,513 src/biotite/sequence/align/kmertable.c:25504:148: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 2023-09-16T22:38:10,516 25504 | *((__pyx_t_7biotite_8sequence_5align_9kmertable_ptr *) ( /* dim=0 */ (__pyx_v_ptr_array.data + __pyx_t_9 * __pyx_v_ptr_array.strides[0]) )) = ((__pyx_t_7biotite_8sequence_5align_9kmertable_ptr)__pyx_v_kmer_ptr); 2023-09-16T22:38:10,517 | ^ 2023-09-16T22:38:10,518 src/biotite/sequence/align/kmertable.c: In function ‘__pyx_pf_7biotite_8sequence_5align_9kmertable_9KmerTable_10match_table’: 2023-09-16T22:38:10,529 src/biotite/sequence/align/kmertable.c:26006:32: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 2023-09-16T22:38:10,544 26006 | __pyx_v_self_kmer_ptr = ((__pyx_t_7biotite_8sequence_5align_9kmertable_uint32 *)(*((__pyx_t_7biotite_8sequence_5align_9kmertable_ptr *) ( /* dim=0 */ (__pyx_v_self_ptr_array.data + __pyx_t_12 * __pyx_v_self_ptr_array.strides[0]) )))); 2023-09-16T22:38:10,549 | ^ 2023-09-16T22:38:10,556 src/biotite/sequence/align/kmertable.c:26016:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 2023-09-16T22:38:10,564 26016 | __pyx_v_other_kmer_ptr = ((__pyx_t_7biotite_8sequence_5align_9kmertable_uint32 *)(*((__pyx_t_7biotite_8sequence_5align_9kmertable_ptr *) ( /* dim=0 */ (__pyx_v_other_ptr_array.data + __pyx_t_12 * __pyx_v_other_ptr_array.strides[0]) )))); 2023-09-16T22:38:10,658 | ^ 2023-09-16T22:38:10,726 src/biotite/sequence/align/kmertable.c:26241:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 2023-09-16T22:38:10,744 26241 | __pyx_v_other_kmer_ptr = ((__pyx_t_7biotite_8sequence_5align_9kmertable_uint32 *)(*((__pyx_t_7biotite_8sequence_5align_9kmertable_ptr *) ( /* dim=0 */ (__pyx_v_other_ptr_array.data + __pyx_t_12 * __pyx_v_other_ptr_array.strides[0]) )))); 2023-09-16T22:38:10,798 | ^ 2023-09-16T22:38:10,861 src/biotite/sequence/align/kmertable.c:26340:36: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 2023-09-16T22:38:10,920 26340 | __pyx_v_self_kmer_ptr = ((__pyx_t_7biotite_8sequence_5align_9kmertable_uint32 *)(*((__pyx_t_7biotite_8sequence_5align_9kmertable_ptr *) ( /* dim=0 */ (__pyx_v_self_ptr_array.data + __pyx_t_14 * __pyx_v_self_ptr_array.strides[0]) )))); 2023-09-16T22:38:10,925 | ^ 2023-09-16T22:38:10,954 src/biotite/sequence/align/kmertable.c: In function ‘__pyx_pf_7biotite_8sequence_5align_9kmertable_9KmerTable_12match’: 2023-09-16T22:38:11,020 src/biotite/sequence/align/kmertable.c:27163:29: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 2023-09-16T22:38:11,026 27163 | __pyx_v_kmer_ptr = ((__pyx_t_7biotite_8sequence_5align_9kmertable_uint32 *)(*((__pyx_t_7biotite_8sequence_5align_9kmertable_ptr *) ( /* dim=0 */ (__pyx_v_ptr_array.data + __pyx_t_16 * __pyx_v_ptr_array.strides[0]) )))); 2023-09-16T22:38:11,164 | ^ 2023-09-16T22:38:11,319 src/biotite/sequence/align/kmertable.c:27456:31: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 2023-09-16T22:38:11,319 27456 | __pyx_v_kmer_ptr = ((__pyx_t_7biotite_8sequence_5align_9kmertable_uint32 *)(*((__pyx_t_7biotite_8sequence_5align_9kmertable_ptr *) ( /* dim=0 */ (__pyx_v_ptr_array.data + __pyx_t_17 * __pyx_v_ptr_array.strides[0]) )))); 2023-09-16T22:38:11,320 | ^ 2023-09-16T22:38:11,321 src/biotite/sequence/align/kmertable.c: In function ‘__pyx_pf_7biotite_8sequence_5align_9kmertable_9KmerTable_14get_kmers’: 2023-09-16T22:38:11,322 src/biotite/sequence/align/kmertable.c:27890:20: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 2023-09-16T22:38:11,322 27890 | __pyx_t_12 = (((__pyx_t_7biotite_8sequence_5align_9kmertable_uint32 *)(*((__pyx_t_7biotite_8sequence_5align_9kmertable_ptr *) ( /* dim=0 */ (__pyx_v_ptr_array.data + __pyx_t_11 * __pyx_v_ptr_array.strides[0]) )))) != NULL); 2023-09-16T22:38:11,324 | ^ 2023-09-16T22:38:11,325 src/biotite/sequence/align/kmertable.c: In function ‘__pyx_pf_7biotite_8sequence_5align_9kmertable_9KmerTable_16__getitem__’: 2023-09-16T22:38:11,325 src/biotite/sequence/align/kmertable.c:28163:23: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 2023-09-16T22:38:11,326 28163 | __pyx_v_kmer_ptr = ((__pyx_t_7biotite_8sequence_5align_9kmertable_uint32 *)(*((__pyx_t_7biotite_8sequence_5align_9kmertable_ptr *) ( /* dim=0 */ (__pyx_v_self->_ptr_array.data + __pyx_t_8 * __pyx_v_self->_ptr_array.strides[0]) )))); 2023-09-16T22:38:11,326 | ^ 2023-09-16T22:38:11,327 src/biotite/sequence/align/kmertable.c: In function ‘__pyx_pf_7biotite_8sequence_5align_9kmertable_9KmerTable_28_equals’: 2023-09-16T22:38:11,327 src/biotite/sequence/align/kmertable.c:29198:30: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 2023-09-16T22:38:11,327 29198 | __pyx_v_self_kmer_ptr = ((__pyx_t_7biotite_8sequence_5align_9kmertable_uint32 *)(*((__pyx_t_7biotite_8sequence_5align_9kmertable_ptr *) ( /* dim=0 */ (__pyx_v_self_ptr_array.data + __pyx_t_9 * __pyx_v_self_ptr_array.strides[0]) )))); 2023-09-16T22:38:11,328 | ^ 2023-09-16T22:38:11,329 src/biotite/sequence/align/kmertable.c:29217:31: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 2023-09-16T22:38:11,329 29217 | __pyx_v_other_kmer_ptr = ((__pyx_t_7biotite_8sequence_5align_9kmertable_uint32 *)(*((__pyx_t_7biotite_8sequence_5align_9kmertable_ptr *) ( /* dim=0 */ (__pyx_v_other_ptr_array.data + __pyx_t_9 * __pyx_v_other_ptr_array.strides[0]) )))); 2023-09-16T22:38:11,330 | ^ 2023-09-16T22:38:11,330 src/biotite/sequence/align/kmertable.c: In function ‘__pyx_pf_7biotite_8sequence_5align_9kmertable_9KmerTable_34__getstate__’: 2023-09-16T22:38:11,331 src/biotite/sequence/align/kmertable.c:30108:25: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 2023-09-16T22:38:11,331 30108 | __pyx_v_kmer_ptr = ((__pyx_t_7biotite_8sequence_5align_9kmertable_uint32 *)(*((__pyx_t_7biotite_8sequence_5align_9kmertable_ptr *) ( /* dim=0 */ (__pyx_v_ptr_array.data + __pyx_t_10 * __pyx_v_ptr_array.strides[0]) )))); 2023-09-16T22:38:11,331 | ^ 2023-09-16T22:38:11,332 src/biotite/sequence/align/kmertable.c: In function ‘__pyx_pf_7biotite_8sequence_5align_9kmertable_9KmerTable_36__setstate__’: 2023-09-16T22:38:11,333 src/biotite/sequence/align/kmertable.c:30572:150: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 2023-09-16T22:38:11,333 30572 | *((__pyx_t_7biotite_8sequence_5align_9kmertable_ptr *) ( /* dim=0 */ (__pyx_v_ptr_array.data + __pyx_t_7 * __pyx_v_ptr_array.strides[0]) )) = ((__pyx_t_7biotite_8sequence_5align_9kmertable_ptr)__pyx_v_kmer_ptr); 2023-09-16T22:38:11,334 | ^ 2023-09-16T22:38:11,334 src/biotite/sequence/align/kmertable.c: In function ‘__pyx_pf_7biotite_8sequence_5align_9kmertable_9KmerTable_40_count_kmers’: 2023-09-16T22:38:11,335 src/biotite/sequence/align/kmertable.c:30850:33: warning: comparison of integer expressions of different signedness: ‘__pyx_t_7biotite_8sequence_5align_9kmertable_uint32’ {aka ‘long unsigned int’} and ‘Py_ssize_t’ {aka ‘int’} [-Wsign-compare] 2023-09-16T22:38:11,335 30850 | for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { 2023-09-16T22:38:11,336 | ^ 2023-09-16T22:38:11,336 src/biotite/sequence/align/kmertable.c: In function ‘__pyx_pf_7biotite_8sequence_5align_9kmertable_9KmerTable_42_count_table_entries’: 2023-09-16T22:38:11,337 src/biotite/sequence/align/kmertable.c:31092:25: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 2023-09-16T22:38:11,337 31092 | __pyx_v_kmer_ptr = ((__pyx_t_7biotite_8sequence_5align_9kmertable_int64 *)(*((__pyx_t_7biotite_8sequence_5align_9kmertable_ptr *) ( /* dim=0 */ (__pyx_v_other_ptr_array.data + __pyx_t_5 * __pyx_v_other_ptr_array.strides[0]) )))); 2023-09-16T22:38:11,337 | ^ 2023-09-16T22:38:11,338 src/biotite/sequence/align/kmertable.c: In function ‘__pyx_pf_7biotite_8sequence_5align_9kmertable_9KmerTable_44_init_c_arrays’: 2023-09-16T22:38:11,338 src/biotite/sequence/align/kmertable.c:31341:150: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 2023-09-16T22:38:11,339 31341 | *((__pyx_t_7biotite_8sequence_5align_9kmertable_ptr *) ( /* dim=0 */ (__pyx_v_ptr_array.data + __pyx_t_5 * __pyx_v_ptr_array.strides[0]) )) = ((__pyx_t_7biotite_8sequence_5align_9kmertable_ptr)__pyx_v_kmer_ptr); 2023-09-16T22:38:11,339 | ^ 2023-09-16T22:38:11,340 src/biotite/sequence/align/kmertable.c: In function ‘__pyx_pf_7biotite_8sequence_5align_9kmertable_9KmerTable_46_add_kmers’: 2023-09-16T22:38:11,341 src/biotite/sequence/align/kmertable.c:31653:33: warning: comparison of integer expressions of different signedness: ‘__pyx_t_7biotite_8sequence_5align_9kmertable_uint32’ {aka ‘long unsigned int’} and ‘Py_ssize_t’ {aka ‘int’} [-Wsign-compare] 2023-09-16T22:38:11,341 31653 | for (__pyx_t_8 = 0; __pyx_t_8 < __pyx_t_2; __pyx_t_8+=1) { 2023-09-16T22:38:11,342 | ^ 2023-09-16T22:38:11,342 src/biotite/sequence/align/kmertable.c:31685:27: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 2023-09-16T22:38:11,343 31685 | __pyx_v_kmer_ptr = ((__pyx_t_7biotite_8sequence_5align_9kmertable_uint32 *)(*((__pyx_t_7biotite_8sequence_5align_9kmertable_ptr *) ( /* dim=0 */ (__pyx_v_ptr_array.data + __pyx_t_10 * __pyx_v_ptr_array.strides[0]) )))); 2023-09-16T22:38:11,343 | ^ 2023-09-16T22:38:11,344 src/biotite/sequence/align/kmertable.c: In function ‘__pyx_pf_7biotite_8sequence_5align_9kmertable_9KmerTable_48_append_entries’: 2023-09-16T22:38:11,345 src/biotite/sequence/align/kmertable.c:31937:30: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 2023-09-16T22:38:11,345 31937 | __pyx_v_self_kmer_ptr = ((__pyx_t_7biotite_8sequence_5align_9kmertable_uint32 *)(*((__pyx_t_7biotite_8sequence_5align_9kmertable_ptr *) ( /* dim=0 */ (__pyx_v_self_ptr_array.data + __pyx_t_5 * __pyx_v_self_ptr_array.strides[0]) )))); 2023-09-16T22:38:11,346 | ^ 2023-09-16T22:38:11,360 src/biotite/sequence/align/kmertable.c:31947:31: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 2023-09-16T22:38:11,361 31947 | __pyx_v_other_kmer_ptr = ((__pyx_t_7biotite_8sequence_5align_9kmertable_uint32 *)(*((__pyx_t_7biotite_8sequence_5align_9kmertable_ptr *) ( /* dim=0 */ (__pyx_v_other_ptr_array.data + __pyx_t_5 * __pyx_v_other_ptr_array.strides[0]) )))); 2023-09-16T22:38:11,362 | ^ 2023-09-16T22:38:11,431 src/biotite/sequence/align/kmertable.c: In function ‘__pyx_f_7biotite_8sequence_5align_9kmertable__deallocate_ptrs’: 2023-09-16T22:38:11,460 src/biotite/sequence/align/kmertable.c:33115:17: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 2023-09-16T22:38:11,461 33115 | PyMem_Free(((__pyx_t_7biotite_8sequence_5align_9kmertable_uint32 *)(*((__pyx_t_7biotite_8sequence_5align_9kmertable_ptr *) ( /* dim=0 */ (__pyx_v_ptrs.data + __pyx_t_4 * __pyx_v_ptrs.strides[0]) ))))); 2023-09-16T22:38:11,462 | ^ 2023-09-16T22:39:09,373 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/biotite/sequence/align/kmertable.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/biotite/sequence/align/kmertable.cpython-311-arm-linux-gnueabihf.so 2023-09-16T22:39:09,541 building 'biotite.sequence.align.kmersimilarity' extension 2023-09-16T22:39:09,542 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/biotite/sequence/align/kmersimilarity.c -o build/temp.linux-armv7l-cpython-311/src/biotite/sequence/align/kmersimilarity.o 2023-09-16T22:39:09,922 In file included from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-09-16T22:39:09,923 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-16T22:39:09,924 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-16T22:39:09,925 from src/biotite/sequence/align/kmersimilarity.c:1167: 2023-09-16T22:39:09,926 /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-16T22:39:09,926 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-16T22:39:09,927 | ^~~~~~~ 2023-09-16T22:39:38,726 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/biotite/sequence/align/kmersimilarity.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/biotite/sequence/align/kmersimilarity.cpython-311-arm-linux-gnueabihf.so 2023-09-16T22:39:38,867 building 'biotite.sequence.align.tracetable' extension 2023-09-16T22:39:38,868 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/biotite/sequence/align/tracetable.c -o build/temp.linux-armv7l-cpython-311/src/biotite/sequence/align/tracetable.o 2023-09-16T22:39:39,248 In file included from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-09-16T22:39:39,249 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-16T22:39:39,250 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-16T22:39:39,250 from src/biotite/sequence/align/tracetable.c:1167: 2023-09-16T22:39:39,251 /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-16T22:39:39,252 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-16T22:39:39,253 | ^~~~~~~ 2023-09-16T22:40:01,979 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/biotite/sequence/align/tracetable.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/biotite/sequence/align/tracetable.cpython-311-arm-linux-gnueabihf.so 2023-09-16T22:40:02,109 building 'biotite.sequence.align.pairwise' extension 2023-09-16T22:40:02,110 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/biotite/sequence/align/pairwise.c -o build/temp.linux-armv7l-cpython-311/src/biotite/sequence/align/pairwise.o 2023-09-16T22:40:02,504 In file included from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-09-16T22:40:02,504 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-16T22:40:02,505 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-16T22:40:02,506 from src/biotite/sequence/align/pairwise.c:1167: 2023-09-16T22:40:02,507 /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-16T22:40:02,507 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-16T22:40:02,508 | ^~~~~~~ 2023-09-16T22:41:26,560 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/biotite/sequence/align/pairwise.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/biotite/sequence/align/pairwise.cpython-311-arm-linux-gnueabihf.so 2023-09-16T22:41:26,761 building 'biotite.sequence.align.multiple' extension 2023-09-16T22:41:26,762 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/biotite/sequence/align/multiple.c -o build/temp.linux-armv7l-cpython-311/src/biotite/sequence/align/multiple.o 2023-09-16T22:41:27,180 In file included from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-09-16T22:41:27,181 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-16T22:41:27,183 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-16T22:41:27,184 from src/biotite/sequence/align/multiple.c:1167: 2023-09-16T22:41:27,185 /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-16T22:41:27,185 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-16T22:41:27,188 | ^~~~~~~ 2023-09-16T22:42:46,563 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/biotite/sequence/align/multiple.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/biotite/sequence/align/multiple.cpython-311-arm-linux-gnueabihf.so 2023-09-16T22:42:46,756 building 'biotite.sequence.phylo.tree' extension 2023-09-16T22:42:46,757 creating build/temp.linux-armv7l-cpython-311/src/biotite/sequence/phylo 2023-09-16T22:42:46,759 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/biotite/sequence/phylo/tree.c -o build/temp.linux-armv7l-cpython-311/src/biotite/sequence/phylo/tree.o 2023-09-16T22:42:47,144 In file included from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-09-16T22:42:47,145 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-16T22:42:47,145 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-16T22:42:47,145 from src/biotite/sequence/phylo/tree.c:1167: 2023-09-16T22:42:47,146 /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-16T22:42:47,146 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-16T22:42:47,147 | ^~~~~~~ 2023-09-16T22:43:24,335 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/biotite/sequence/phylo/tree.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/biotite/sequence/phylo/tree.cpython-311-arm-linux-gnueabihf.so 2023-09-16T22:43:24,473 building 'biotite.sequence.phylo.upgma' extension 2023-09-16T22:43:24,473 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/biotite/sequence/phylo/upgma.c -o build/temp.linux-armv7l-cpython-311/src/biotite/sequence/phylo/upgma.o 2023-09-16T22:43:24,853 In file included from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-09-16T22:43:24,853 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-16T22:43:24,854 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-16T22:43:24,855 from src/biotite/sequence/phylo/upgma.c:1167: 2023-09-16T22:43:24,856 /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-16T22:43:24,857 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-16T22:43:24,857 | ^~~~~~~ 2023-09-16T22:43:49,161 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/biotite/sequence/phylo/upgma.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/biotite/sequence/phylo/upgma.cpython-311-arm-linux-gnueabihf.so 2023-09-16T22:43:49,293 building 'biotite.sequence.phylo.nj' extension 2023-09-16T22:43:49,294 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/biotite/sequence/phylo/nj.c -o build/temp.linux-armv7l-cpython-311/src/biotite/sequence/phylo/nj.o 2023-09-16T22:43:49,676 In file included from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-09-16T22:43:49,677 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-16T22:43:49,678 from /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-16T22:43:49,679 from src/biotite/sequence/phylo/nj.c:1167: 2023-09-16T22:43:49,680 /tmp/pip-build-env-eqdab62z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-16T22:43:49,681 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-16T22:43:49,682 | ^~~~~~~ 2023-09-16T22:44:16,757 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/biotite/sequence/phylo/nj.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/biotite/sequence/phylo/nj.cpython-311-arm-linux-gnueabihf.so 2023-09-16T22:44:16,897 installing to build/bdist.linux-armv7l/wheel 2023-09-16T22:44:16,897 running install 2023-09-16T22:44:16,922 running install_lib 2023-09-16T22:44:16,928 creating build/bdist.linux-armv7l 2023-09-16T22:44:16,930 creating build/bdist.linux-armv7l/wheel 2023-09-16T22:44:16,932 creating build/bdist.linux-armv7l/wheel/biotite 2023-09-16T22:44:16,934 creating build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:16,936 copying build/lib.linux-armv7l-cpython-311/biotite/structure/basepairs.py -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:16,940 copying build/lib.linux-armv7l-cpython-311/biotite/structure/charges.c -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:16,964 copying build/lib.linux-armv7l-cpython-311/biotite/structure/transform.py -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:16,967 copying build/lib.linux-armv7l-cpython-311/biotite/structure/chains.py -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:16,970 copying build/lib.linux-armv7l-cpython-311/biotite/structure/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:16,973 copying build/lib.linux-armv7l-cpython-311/biotite/structure/bonds.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:17,011 copying build/lib.linux-armv7l-cpython-311/biotite/structure/rdf.py -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:17,014 copying build/lib.linux-armv7l-cpython-311/biotite/structure/molecules.py -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:17,018 copying build/lib.linux-armv7l-cpython-311/biotite/structure/celllist.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:17,040 copying build/lib.linux-armv7l-cpython-311/biotite/structure/density.py -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:17,043 copying build/lib.linux-armv7l-cpython-311/biotite/structure/util.py -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:17,046 copying build/lib.linux-armv7l-cpython-311/biotite/structure/error.py -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:17,049 copying build/lib.linux-armv7l-cpython-311/biotite/structure/sasa.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:17,069 copying build/lib.linux-armv7l-cpython-311/biotite/structure/sse.py -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:17,072 copying build/lib.linux-armv7l-cpython-311/biotite/structure/bonds.c -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:17,111 copying build/lib.linux-armv7l-cpython-311/biotite/structure/compare.py -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:17,113 copying build/lib.linux-armv7l-cpython-311/biotite/structure/integrity.py -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:17,116 creating build/bdist.linux-armv7l/wheel/biotite/structure/info 2023-09-16T22:44:17,118 copying build/lib.linux-armv7l-cpython-311/biotite/structure/info/residue_names.msgpack -> build/bdist.linux-armv7l/wheel/biotite/structure/info 2023-09-16T22:44:17,163 copying build/lib.linux-armv7l-cpython-311/biotite/structure/info/masses.py -> build/bdist.linux-armv7l/wheel/biotite/structure/info 2023-09-16T22:44:17,166 copying build/lib.linux-armv7l-cpython-311/biotite/structure/info/amino_acids.json -> build/bdist.linux-armv7l/wheel/biotite/structure/info 2023-09-16T22:44:17,169 copying build/lib.linux-armv7l-cpython-311/biotite/structure/info/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/structure/info 2023-09-16T22:44:17,172 copying build/lib.linux-armv7l-cpython-311/biotite/structure/info/link_types.msgpack -> build/bdist.linux-armv7l/wheel/biotite/structure/info 2023-09-16T22:44:17,184 copying build/lib.linux-armv7l-cpython-311/biotite/structure/info/bonds.py -> build/bdist.linux-armv7l/wheel/biotite/structure/info 2023-09-16T22:44:17,187 copying build/lib.linux-armv7l-cpython-311/biotite/structure/info/residue_masses.msgpack -> build/bdist.linux-armv7l/wheel/biotite/structure/info 2023-09-16T22:44:17,197 copying build/lib.linux-armv7l-cpython-311/biotite/structure/info/carbohydrates.json -> build/bdist.linux-armv7l/wheel/biotite/structure/info 2023-09-16T22:44:17,200 copying build/lib.linux-armv7l-cpython-311/biotite/structure/info/carbohydrates.py -> build/bdist.linux-armv7l/wheel/biotite/structure/info 2023-09-16T22:44:17,202 copying build/lib.linux-armv7l-cpython-311/biotite/structure/info/radii.py -> build/bdist.linux-armv7l/wheel/biotite/structure/info 2023-09-16T22:44:17,205 copying build/lib.linux-armv7l-cpython-311/biotite/structure/info/standardize.py -> build/bdist.linux-armv7l/wheel/biotite/structure/info 2023-09-16T22:44:17,208 copying build/lib.linux-armv7l-cpython-311/biotite/structure/info/misc.py -> build/bdist.linux-armv7l/wheel/biotite/structure/info 2023-09-16T22:44:17,211 copying build/lib.linux-armv7l-cpython-311/biotite/structure/info/atom_masses.json -> build/bdist.linux-armv7l/wheel/biotite/structure/info 2023-09-16T22:44:17,214 copying build/lib.linux-armv7l-cpython-311/biotite/structure/info/intra_bonds.msgpack -> build/bdist.linux-armv7l/wheel/biotite/structure/info 2023-09-16T22:44:17,442 copying build/lib.linux-armv7l-cpython-311/biotite/structure/info/nucleotides.json -> build/bdist.linux-armv7l/wheel/biotite/structure/info 2023-09-16T22:44:17,445 copying build/lib.linux-armv7l-cpython-311/biotite/structure/info/nucleotides.py -> build/bdist.linux-armv7l/wheel/biotite/structure/info 2023-09-16T22:44:17,448 copying build/lib.linux-armv7l-cpython-311/biotite/structure/info/atoms.py -> build/bdist.linux-armv7l/wheel/biotite/structure/info 2023-09-16T22:44:17,451 copying build/lib.linux-armv7l-cpython-311/biotite/structure/info/residues.msgpack -> build/bdist.linux-armv7l/wheel/biotite/structure/info 2023-09-16T22:44:20,304 copying build/lib.linux-armv7l-cpython-311/biotite/structure/info/amino_acids.py -> build/bdist.linux-armv7l/wheel/biotite/structure/info 2023-09-16T22:44:20,307 copying build/lib.linux-armv7l-cpython-311/biotite/structure/sasa.c -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:20,332 copying build/lib.linux-armv7l-cpython-311/biotite/structure/geometry.py -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:20,336 copying build/lib.linux-armv7l-cpython-311/biotite/structure/dotbracket.py -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:20,340 copying build/lib.linux-armv7l-cpython-311/biotite/structure/box.py -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:20,344 copying build/lib.linux-armv7l-cpython-311/biotite/structure/mechanics.py -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:20,347 creating build/bdist.linux-armv7l/wheel/biotite/structure/graphics 2023-09-16T22:44:20,349 copying build/lib.linux-armv7l-cpython-311/biotite/structure/graphics/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/structure/graphics 2023-09-16T22:44:20,352 copying build/lib.linux-armv7l-cpython-311/biotite/structure/graphics/rna.py -> build/bdist.linux-armv7l/wheel/biotite/structure/graphics 2023-09-16T22:44:20,356 copying build/lib.linux-armv7l-cpython-311/biotite/structure/graphics/atoms.py -> build/bdist.linux-armv7l/wheel/biotite/structure/graphics 2023-09-16T22:44:20,360 copying build/lib.linux-armv7l-cpython-311/biotite/structure/resutil.py -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:20,364 copying build/lib.linux-armv7l-cpython-311/biotite/structure/celllist.c -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:20,392 copying build/lib.linux-armv7l-cpython-311/biotite/structure/hbond.py -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:20,395 copying build/lib.linux-armv7l-cpython-311/biotite/structure/atoms.py -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:20,399 copying build/lib.linux-armv7l-cpython-311/biotite/structure/residues.py -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:20,403 copying build/lib.linux-armv7l-cpython-311/biotite/structure/pseudoknots.py -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:20,406 copying build/lib.linux-armv7l-cpython-311/biotite/structure/charges.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:20,435 copying build/lib.linux-armv7l-cpython-311/biotite/structure/superimpose.py -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:20,439 creating build/bdist.linux-armv7l/wheel/biotite/structure/io 2023-09-16T22:44:20,441 creating build/bdist.linux-armv7l/wheel/biotite/structure/io/tng 2023-09-16T22:44:20,442 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/tng/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io/tng 2023-09-16T22:44:20,445 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/tng/file.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io/tng 2023-09-16T22:44:20,448 creating build/bdist.linux-armv7l/wheel/biotite/structure/io/mol 2023-09-16T22:44:20,449 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/mol/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io/mol 2023-09-16T22:44:20,451 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/mol/convert.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io/mol 2023-09-16T22:44:20,454 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/mol/file.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io/mol 2023-09-16T22:44:20,456 creating build/bdist.linux-armv7l/wheel/biotite/structure/io/pdbx 2023-09-16T22:44:20,457 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/pdbx/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io/pdbx 2023-09-16T22:44:20,460 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/pdbx/convert.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io/pdbx 2023-09-16T22:44:20,463 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/pdbx/file.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io/pdbx 2023-09-16T22:44:20,466 creating build/bdist.linux-armv7l/wheel/biotite/structure/io/npz 2023-09-16T22:44:20,467 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/npz/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io/npz 2023-09-16T22:44:20,470 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/npz/file.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io/npz 2023-09-16T22:44:20,472 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io 2023-09-16T22:44:20,474 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/trajfile.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io 2023-09-16T22:44:20,478 creating build/bdist.linux-armv7l/wheel/biotite/structure/io/xtc 2023-09-16T22:44:20,479 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/xtc/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io/xtc 2023-09-16T22:44:20,481 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/xtc/file.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io/xtc 2023-09-16T22:44:20,483 creating build/bdist.linux-armv7l/wheel/biotite/structure/io/pdb 2023-09-16T22:44:20,485 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/pdb/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io/pdb 2023-09-16T22:44:20,486 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/pdb/convert.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io/pdb 2023-09-16T22:44:20,489 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/pdb/hybrid36.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biotite/structure/io/pdb 2023-09-16T22:44:21,534 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/pdb/file.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io/pdb 2023-09-16T22:44:21,557 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/pdb/hybrid36.c -> build/bdist.linux-armv7l/wheel/biotite/structure/io/pdb 2023-09-16T22:44:22,087 creating build/bdist.linux-armv7l/wheel/biotite/structure/io/dcd 2023-09-16T22:44:22,089 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/dcd/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io/dcd 2023-09-16T22:44:22,092 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/dcd/file.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io/dcd 2023-09-16T22:44:22,096 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/general.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io 2023-09-16T22:44:22,321 creating build/bdist.linux-armv7l/wheel/biotite/structure/io/trr 2023-09-16T22:44:22,323 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/trr/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io/trr 2023-09-16T22:44:22,326 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/trr/file.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io/trr 2023-09-16T22:44:22,330 creating build/bdist.linux-armv7l/wheel/biotite/structure/io/netcdf 2023-09-16T22:44:22,332 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/netcdf/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io/netcdf 2023-09-16T22:44:22,336 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/netcdf/file.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io/netcdf 2023-09-16T22:44:22,343 creating build/bdist.linux-armv7l/wheel/biotite/structure/io/gro 2023-09-16T22:44:22,345 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/gro/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io/gro 2023-09-16T22:44:22,350 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/gro/file.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io/gro 2023-09-16T22:44:22,355 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/ctab.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io 2023-09-16T22:44:22,361 creating build/bdist.linux-armv7l/wheel/biotite/structure/io/pdbqt 2023-09-16T22:44:22,363 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/pdbqt/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io/pdbqt 2023-09-16T22:44:22,367 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/pdbqt/convert.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io/pdbqt 2023-09-16T22:44:22,371 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/pdbqt/file.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io/pdbqt 2023-09-16T22:44:22,377 creating build/bdist.linux-armv7l/wheel/biotite/structure/io/mmtf 2023-09-16T22:44:22,379 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/mmtf/encode.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biotite/structure/io/mmtf 2023-09-16T22:44:22,434 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/mmtf/convertfile.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biotite/structure/io/mmtf 2023-09-16T22:44:22,483 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/mmtf/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io/mmtf 2023-09-16T22:44:22,486 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/mmtf/assembly.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io/mmtf 2023-09-16T22:44:22,489 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/mmtf/file.py -> build/bdist.linux-armv7l/wheel/biotite/structure/io/mmtf 2023-09-16T22:44:22,492 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/mmtf/decode.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biotite/structure/io/mmtf 2023-09-16T22:44:22,519 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/mmtf/encode.c -> build/bdist.linux-armv7l/wheel/biotite/structure/io/mmtf 2023-09-16T22:44:22,550 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/mmtf/convertarray.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biotite/structure/io/mmtf 2023-09-16T22:44:22,563 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/mmtf/convertfile.c -> build/bdist.linux-armv7l/wheel/biotite/structure/io/mmtf 2023-09-16T22:44:22,594 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/mmtf/decode.c -> build/bdist.linux-armv7l/wheel/biotite/structure/io/mmtf 2023-09-16T22:44:22,625 copying build/lib.linux-armv7l-cpython-311/biotite/structure/io/mmtf/convertarray.c -> build/bdist.linux-armv7l/wheel/biotite/structure/io/mmtf 2023-09-16T22:44:22,637 copying build/lib.linux-armv7l-cpython-311/biotite/structure/filter.py -> build/bdist.linux-armv7l/wheel/biotite/structure 2023-09-16T22:44:22,640 creating build/bdist.linux-armv7l/wheel/biotite/sequence 2023-09-16T22:44:22,641 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/search.py -> build/bdist.linux-armv7l/wheel/biotite/sequence 2023-09-16T22:44:22,644 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/codon.py -> build/bdist.linux-armv7l/wheel/biotite/sequence 2023-09-16T22:44:22,647 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/codec.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biotite/sequence 2023-09-16T22:44:22,669 creating build/bdist.linux-armv7l/wheel/biotite/sequence/align 2023-09-16T22:44:22,670 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/banded.c -> build/bdist.linux-armv7l/wheel/biotite/sequence/align 2023-09-16T22:44:22,722 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/kmertable.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biotite/sequence/align 2023-09-16T22:44:22,751 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/kmersimilarity.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biotite/sequence/align 2023-09-16T22:44:22,769 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/localgapped.c -> build/bdist.linux-armv7l/wheel/biotite/sequence/align 2023-09-16T22:44:22,836 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/tracetable.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biotite/sequence/align 2023-09-16T22:44:22,852 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/sequence/align 2023-09-16T22:44:22,854 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/localungapped.c -> build/bdist.linux-armv7l/wheel/biotite/sequence/align 2023-09-16T22:44:22,880 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/kmeralphabet.c -> build/bdist.linux-armv7l/wheel/biotite/sequence/align 2023-09-16T22:44:22,909 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/localungapped.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biotite/sequence/align 2023-09-16T22:44:22,936 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/kmertable.c -> build/bdist.linux-armv7l/wheel/biotite/sequence/align 2023-09-16T22:44:22,969 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/multiple.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biotite/sequence/align 2023-09-16T22:44:23,225 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/kmeralphabet.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biotite/sequence/align 2023-09-16T22:44:23,266 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/alignment.py -> build/bdist.linux-armv7l/wheel/biotite/sequence/align 2023-09-16T22:44:23,271 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/kmersimilarity.c -> build/bdist.linux-armv7l/wheel/biotite/sequence/align 2023-09-16T22:44:23,304 creating build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,305 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM360.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,308 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM480.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,311 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM90.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,314 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM270.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,315 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/BLOSUM100.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,317 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/BLOSUM70.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,319 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM30.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,322 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/MATCH.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,324 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/BLOSUM62_14.3.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,325 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/BLOSUM85.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,327 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/RBLOSUM69_13p.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,329 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM380.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,331 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM20.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,334 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM130.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,336 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM250.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,337 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/BLOSUM62.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,339 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/BLOSUM65.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,341 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM170.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,343 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM100.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,345 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM160.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,347 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/BLOSUM50_13p.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,349 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM80.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,351 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM310.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,354 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/BLOSUM55.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,355 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM470.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,358 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/CorBLOSUM57_14.3.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,359 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM400.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,361 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM410.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,364 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM240.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,366 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/BLOSUM60.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,367 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM390.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,370 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM40.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,372 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM350.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,375 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM60.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,377 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/CorBLOSUM66_13p.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,378 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM180.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,381 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM120.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,383 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/RBLOSUM52_5.0.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,385 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/BLOSUMN.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,386 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM340.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,388 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM320.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,390 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM150.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,392 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM220.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,394 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM490.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,396 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/NUC.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,398 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM300.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,400 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM450.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,402 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/IDENTITY.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,405 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM210.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,407 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/BLOSUM50_14.3.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,409 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM500.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,411 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM280.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,413 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM10.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,415 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/RBLOSUM69_14.3.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,417 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM260.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,419 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM460.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,422 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM50.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,423 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM430.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,426 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/DAYHOFF.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,428 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM420.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,430 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM230.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,431 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/BLOSUM45.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,433 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM370.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,435 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM330.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,437 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/RBLOSUM59_14.3.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,439 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM140.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,441 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/BLOSUM35.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,443 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM190.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,445 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/RBLOSUM64_5.0.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,448 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM440.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,450 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/BLOSUM40.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,452 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/BLOSUM62_13p.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,454 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/BLOSUM30.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,456 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/BLOSUM50_5.0.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,459 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/BLOSUM62_5.0.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,461 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/BLOSUM75.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,463 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/CorBLOSUM67_14.3.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,465 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/BLOSUM80.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,467 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/GONNET.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,469 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/CorBLOSUM61_5.0.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,471 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/BLOSUM90.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,473 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM70.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,475 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/CorBLOSUM57_13p.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,477 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM290.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,479 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM200.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,481 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/BLOSUM50.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,483 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/CorBLOSUM49_5.0.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,485 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/RBLOSUM59_13p.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,487 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix_data/PAM110.mat -> build/bdist.linux-armv7l/wheel/biotite/sequence/align/matrix_data 2023-09-16T22:44:23,489 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/pairwise.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biotite/sequence/align 2023-09-16T22:44:23,547 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/tracetable.c -> build/bdist.linux-armv7l/wheel/biotite/sequence/align 2023-09-16T22:44:23,568 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/localgapped.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biotite/sequence/align 2023-09-16T22:44:23,664 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/statistics.py -> build/bdist.linux-armv7l/wheel/biotite/sequence/align 2023-09-16T22:44:23,666 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/pairwise.c -> build/bdist.linux-armv7l/wheel/biotite/sequence/align 2023-09-16T22:44:23,718 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/banded.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biotite/sequence/align 2023-09-16T22:44:23,757 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/matrix.py -> build/bdist.linux-armv7l/wheel/biotite/sequence/align 2023-09-16T22:44:23,760 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/align/multiple.c -> build/bdist.linux-armv7l/wheel/biotite/sequence/align 2023-09-16T22:44:23,804 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/sequence 2023-09-16T22:44:23,806 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/sequence.py -> build/bdist.linux-armv7l/wheel/biotite/sequence 2023-09-16T22:44:23,809 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/alphabet.py -> build/bdist.linux-armv7l/wheel/biotite/sequence 2023-09-16T22:44:23,812 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/profile.py -> build/bdist.linux-armv7l/wheel/biotite/sequence 2023-09-16T22:44:23,814 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/codon_tables.txt -> build/bdist.linux-armv7l/wheel/biotite/sequence 2023-09-16T22:44:23,818 creating build/bdist.linux-armv7l/wheel/biotite/sequence/graphics 2023-09-16T22:44:23,820 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/colorschemes.py -> build/bdist.linux-armv7l/wheel/biotite/sequence/graphics 2023-09-16T22:44:23,823 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/features.py -> build/bdist.linux-armv7l/wheel/biotite/sequence/graphics 2023-09-16T22:44:23,825 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/sequence/graphics 2023-09-16T22:44:23,827 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/logo.py -> build/bdist.linux-armv7l/wheel/biotite/sequence/graphics 2023-09-16T22:44:23,829 creating build/bdist.linux-armv7l/wheel/biotite/sequence/graphics/color_schemes 2023-09-16T22:44:23,831 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes/jalview_prop_strand.json -> build/bdist.linux-armv7l/wheel/biotite/sequence/graphics/color_schemes 2023-09-16T22:44:23,833 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes/blossom.json -> build/bdist.linux-armv7l/wheel/biotite/sequence/graphics/color_schemes 2023-09-16T22:44:23,834 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes/jalview_taylor.json -> build/bdist.linux-armv7l/wheel/biotite/sequence/graphics/color_schemes 2023-09-16T22:44:23,836 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes/jalview_prop_turn.json -> build/bdist.linux-armv7l/wheel/biotite/sequence/graphics/color_schemes 2023-09-16T22:44:23,838 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes/ocean.json -> build/bdist.linux-armv7l/wheel/biotite/sequence/graphics/color_schemes 2023-09-16T22:44:23,840 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes/sunset.json -> build/bdist.linux-armv7l/wheel/biotite/sequence/graphics/color_schemes 2023-09-16T22:44:23,842 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes/autumn.json -> build/bdist.linux-armv7l/wheel/biotite/sequence/graphics/color_schemes 2023-09-16T22:44:23,844 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes/spring.json -> build/bdist.linux-armv7l/wheel/biotite/sequence/graphics/color_schemes 2023-09-16T22:44:23,846 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes/pb_flower.json -> build/bdist.linux-armv7l/wheel/biotite/sequence/graphics/color_schemes 2023-09-16T22:44:23,848 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes/jalview_buried.json -> build/bdist.linux-armv7l/wheel/biotite/sequence/graphics/color_schemes 2023-09-16T22:44:23,850 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes/jalview_prop_helix.json -> build/bdist.linux-armv7l/wheel/biotite/sequence/graphics/color_schemes 2023-09-16T22:44:23,852 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes/jalview_hydrophobicity.json -> build/bdist.linux-armv7l/wheel/biotite/sequence/graphics/color_schemes 2023-09-16T22:44:23,854 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes/flower.json -> build/bdist.linux-armv7l/wheel/biotite/sequence/graphics/color_schemes 2023-09-16T22:44:23,856 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes/clustalx_dna.json -> build/bdist.linux-armv7l/wheel/biotite/sequence/graphics/color_schemes 2023-09-16T22:44:23,857 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes/clustalx_protein.json -> build/bdist.linux-armv7l/wheel/biotite/sequence/graphics/color_schemes 2023-09-16T22:44:23,859 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes/wither.json -> build/bdist.linux-armv7l/wheel/biotite/sequence/graphics/color_schemes 2023-09-16T22:44:23,861 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes/rainbow_dna.json -> build/bdist.linux-armv7l/wheel/biotite/sequence/graphics/color_schemes 2023-09-16T22:44:23,863 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes/rainbow_protein.json -> build/bdist.linux-armv7l/wheel/biotite/sequence/graphics/color_schemes 2023-09-16T22:44:23,865 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/color_schemes/jalview_zappo.json -> build/bdist.linux-armv7l/wheel/biotite/sequence/graphics/color_schemes 2023-09-16T22:44:23,867 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/alignment.py -> build/bdist.linux-armv7l/wheel/biotite/sequence/graphics 2023-09-16T22:44:23,869 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/dendrogram.py -> build/bdist.linux-armv7l/wheel/biotite/sequence/graphics 2023-09-16T22:44:23,872 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/graphics/plasmid.py -> build/bdist.linux-armv7l/wheel/biotite/sequence/graphics 2023-09-16T22:44:23,875 creating build/bdist.linux-armv7l/wheel/biotite/sequence/phylo 2023-09-16T22:44:23,875 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/phylo/tree.c -> build/bdist.linux-armv7l/wheel/biotite/sequence/phylo 2023-09-16T22:44:23,896 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/phylo/tree.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biotite/sequence/phylo 2023-09-16T22:44:23,921 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/phylo/nj.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biotite/sequence/phylo 2023-09-16T22:44:23,937 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/phylo/upgma.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biotite/sequence/phylo 2023-09-16T22:44:23,953 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/phylo/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/sequence/phylo 2023-09-16T22:44:23,955 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/phylo/upgma.c -> build/bdist.linux-armv7l/wheel/biotite/sequence/phylo 2023-09-16T22:44:23,976 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/phylo/nj.c -> build/bdist.linux-armv7l/wheel/biotite/sequence/phylo 2023-09-16T22:44:23,997 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/annotation.py -> build/bdist.linux-armv7l/wheel/biotite/sequence 2023-09-16T22:44:24,000 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/codec.c -> build/bdist.linux-armv7l/wheel/biotite/sequence 2023-09-16T22:44:24,025 creating build/bdist.linux-armv7l/wheel/biotite/sequence/io 2023-09-16T22:44:24,026 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/io/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/sequence/io 2023-09-16T22:44:24,030 creating build/bdist.linux-armv7l/wheel/biotite/sequence/io/fastq 2023-09-16T22:44:24,031 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/io/fastq/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/sequence/io/fastq 2023-09-16T22:44:24,033 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/io/fastq/convert.py -> build/bdist.linux-armv7l/wheel/biotite/sequence/io/fastq 2023-09-16T22:44:24,036 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/io/fastq/file.py -> build/bdist.linux-armv7l/wheel/biotite/sequence/io/fastq 2023-09-16T22:44:24,039 creating build/bdist.linux-armv7l/wheel/biotite/sequence/io/genbank 2023-09-16T22:44:24,040 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/io/genbank/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/sequence/io/genbank 2023-09-16T22:44:24,043 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/io/genbank/sequence.py -> build/bdist.linux-armv7l/wheel/biotite/sequence/io/genbank 2023-09-16T22:44:24,045 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/io/genbank/file.py -> build/bdist.linux-armv7l/wheel/biotite/sequence/io/genbank 2023-09-16T22:44:24,047 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/io/genbank/metadata.py -> build/bdist.linux-armv7l/wheel/biotite/sequence/io/genbank 2023-09-16T22:44:24,050 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/io/genbank/annotation.py -> build/bdist.linux-armv7l/wheel/biotite/sequence/io/genbank 2023-09-16T22:44:24,052 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/io/general.py -> build/bdist.linux-armv7l/wheel/biotite/sequence/io 2023-09-16T22:44:24,055 creating build/bdist.linux-armv7l/wheel/biotite/sequence/io/gff 2023-09-16T22:44:24,056 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/io/gff/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/sequence/io/gff 2023-09-16T22:44:24,058 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/io/gff/convert.py -> build/bdist.linux-armv7l/wheel/biotite/sequence/io/gff 2023-09-16T22:44:24,060 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/io/gff/file.py -> build/bdist.linux-armv7l/wheel/biotite/sequence/io/gff 2023-09-16T22:44:24,063 creating build/bdist.linux-armv7l/wheel/biotite/sequence/io/fasta 2023-09-16T22:44:24,064 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/io/fasta/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/sequence/io/fasta 2023-09-16T22:44:24,066 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/io/fasta/convert.py -> build/bdist.linux-armv7l/wheel/biotite/sequence/io/fasta 2023-09-16T22:44:24,068 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/io/fasta/file.py -> build/bdist.linux-armv7l/wheel/biotite/sequence/io/fasta 2023-09-16T22:44:24,071 copying build/lib.linux-armv7l-cpython-311/biotite/sequence/seqtypes.py -> build/bdist.linux-armv7l/wheel/biotite/sequence 2023-09-16T22:44:24,074 copying build/lib.linux-armv7l-cpython-311/biotite/__init__.py -> build/bdist.linux-armv7l/wheel/biotite 2023-09-16T22:44:24,075 copying build/lib.linux-armv7l-cpython-311/biotite/visualize.py -> build/bdist.linux-armv7l/wheel/biotite 2023-09-16T22:44:24,078 creating build/bdist.linux-armv7l/wheel/biotite/database 2023-09-16T22:44:24,079 copying build/lib.linux-armv7l-cpython-311/biotite/database/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/database 2023-09-16T22:44:24,082 creating build/bdist.linux-armv7l/wheel/biotite/database/pubchem 2023-09-16T22:44:24,083 copying build/lib.linux-armv7l-cpython-311/biotite/database/pubchem/query.py -> build/bdist.linux-armv7l/wheel/biotite/database/pubchem 2023-09-16T22:44:24,086 copying build/lib.linux-armv7l-cpython-311/biotite/database/pubchem/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/database/pubchem 2023-09-16T22:44:24,088 copying build/lib.linux-armv7l-cpython-311/biotite/database/pubchem/error.py -> build/bdist.linux-armv7l/wheel/biotite/database/pubchem 2023-09-16T22:44:24,089 copying build/lib.linux-armv7l-cpython-311/biotite/database/pubchem/download.py -> build/bdist.linux-armv7l/wheel/biotite/database/pubchem 2023-09-16T22:44:24,092 copying build/lib.linux-armv7l-cpython-311/biotite/database/pubchem/throttle.py -> build/bdist.linux-armv7l/wheel/biotite/database/pubchem 2023-09-16T22:44:24,094 copying build/lib.linux-armv7l-cpython-311/biotite/database/error.py -> build/bdist.linux-armv7l/wheel/biotite/database 2023-09-16T22:44:24,096 creating build/bdist.linux-armv7l/wheel/biotite/database/entrez 2023-09-16T22:44:24,097 copying build/lib.linux-armv7l-cpython-311/biotite/database/entrez/query.py -> build/bdist.linux-armv7l/wheel/biotite/database/entrez 2023-09-16T22:44:24,099 copying build/lib.linux-armv7l-cpython-311/biotite/database/entrez/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/database/entrez 2023-09-16T22:44:24,101 copying build/lib.linux-armv7l-cpython-311/biotite/database/entrez/dbnames.py -> build/bdist.linux-armv7l/wheel/biotite/database/entrez 2023-09-16T22:44:24,103 copying build/lib.linux-armv7l-cpython-311/biotite/database/entrez/check.py -> build/bdist.linux-armv7l/wheel/biotite/database/entrez 2023-09-16T22:44:24,105 copying build/lib.linux-armv7l-cpython-311/biotite/database/entrez/download.py -> build/bdist.linux-armv7l/wheel/biotite/database/entrez 2023-09-16T22:44:24,108 creating build/bdist.linux-armv7l/wheel/biotite/database/uniprot 2023-09-16T22:44:24,109 copying build/lib.linux-armv7l-cpython-311/biotite/database/uniprot/query.py -> build/bdist.linux-armv7l/wheel/biotite/database/uniprot 2023-09-16T22:44:24,112 copying build/lib.linux-armv7l-cpython-311/biotite/database/uniprot/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/database/uniprot 2023-09-16T22:44:24,113 copying build/lib.linux-armv7l-cpython-311/biotite/database/uniprot/check.py -> build/bdist.linux-armv7l/wheel/biotite/database/uniprot 2023-09-16T22:44:24,115 copying build/lib.linux-armv7l-cpython-311/biotite/database/uniprot/download.py -> build/bdist.linux-armv7l/wheel/biotite/database/uniprot 2023-09-16T22:44:24,117 creating build/bdist.linux-armv7l/wheel/biotite/database/rcsb 2023-09-16T22:44:24,119 copying build/lib.linux-armv7l-cpython-311/biotite/database/rcsb/query.py -> build/bdist.linux-armv7l/wheel/biotite/database/rcsb 2023-09-16T22:44:24,121 copying build/lib.linux-armv7l-cpython-311/biotite/database/rcsb/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/database/rcsb 2023-09-16T22:44:24,123 copying build/lib.linux-armv7l-cpython-311/biotite/database/rcsb/download.py -> build/bdist.linux-armv7l/wheel/biotite/database/rcsb 2023-09-16T22:44:24,126 creating build/bdist.linux-armv7l/wheel/biotite/application 2023-09-16T22:44:24,127 creating build/bdist.linux-armv7l/wheel/biotite/application/mafft 2023-09-16T22:44:24,128 copying build/lib.linux-armv7l-cpython-311/biotite/application/mafft/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/application/mafft 2023-09-16T22:44:24,130 copying build/lib.linux-armv7l-cpython-311/biotite/application/mafft/app.py -> build/bdist.linux-armv7l/wheel/biotite/application/mafft 2023-09-16T22:44:24,132 copying build/lib.linux-armv7l-cpython-311/biotite/application/application.py -> build/bdist.linux-armv7l/wheel/biotite/application 2023-09-16T22:44:24,135 creating build/bdist.linux-armv7l/wheel/biotite/application/sra 2023-09-16T22:44:24,137 copying build/lib.linux-armv7l-cpython-311/biotite/application/sra/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/application/sra 2023-09-16T22:44:24,138 copying build/lib.linux-armv7l-cpython-311/biotite/application/sra/app.py -> build/bdist.linux-armv7l/wheel/biotite/application/sra 2023-09-16T22:44:24,140 copying build/lib.linux-armv7l-cpython-311/biotite/application/localapp.py -> build/bdist.linux-armv7l/wheel/biotite/application 2023-09-16T22:44:24,142 copying build/lib.linux-armv7l-cpython-311/biotite/application/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/application 2023-09-16T22:44:24,144 copying build/lib.linux-armv7l-cpython-311/biotite/application/msaapp.py -> build/bdist.linux-armv7l/wheel/biotite/application 2023-09-16T22:44:24,147 creating build/bdist.linux-armv7l/wheel/biotite/application/clustalo 2023-09-16T22:44:24,149 copying build/lib.linux-armv7l-cpython-311/biotite/application/clustalo/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/application/clustalo 2023-09-16T22:44:24,151 copying build/lib.linux-armv7l-cpython-311/biotite/application/clustalo/app.py -> build/bdist.linux-armv7l/wheel/biotite/application/clustalo 2023-09-16T22:44:24,153 creating build/bdist.linux-armv7l/wheel/biotite/application/dssp 2023-09-16T22:44:24,155 copying build/lib.linux-armv7l-cpython-311/biotite/application/dssp/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/application/dssp 2023-09-16T22:44:24,156 copying build/lib.linux-armv7l-cpython-311/biotite/application/dssp/app.py -> build/bdist.linux-armv7l/wheel/biotite/application/dssp 2023-09-16T22:44:24,159 copying build/lib.linux-armv7l-cpython-311/biotite/application/webapp.py -> build/bdist.linux-armv7l/wheel/biotite/application 2023-09-16T22:44:24,161 copying build/lib.linux-armv7l-cpython-311/biotite/application/util.py -> build/bdist.linux-armv7l/wheel/biotite/application 2023-09-16T22:44:24,164 creating build/bdist.linux-armv7l/wheel/biotite/application/viennarna 2023-09-16T22:44:24,165 copying build/lib.linux-armv7l-cpython-311/biotite/application/viennarna/rnafold.py -> build/bdist.linux-armv7l/wheel/biotite/application/viennarna 2023-09-16T22:44:24,167 copying build/lib.linux-armv7l-cpython-311/biotite/application/viennarna/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/application/viennarna 2023-09-16T22:44:24,169 copying build/lib.linux-armv7l-cpython-311/biotite/application/viennarna/rnaplot.py -> build/bdist.linux-armv7l/wheel/biotite/application/viennarna 2023-09-16T22:44:24,171 copying build/lib.linux-armv7l-cpython-311/biotite/application/viennarna/rnaalifold.py -> build/bdist.linux-armv7l/wheel/biotite/application/viennarna 2023-09-16T22:44:24,173 copying build/lib.linux-armv7l-cpython-311/biotite/application/viennarna/util.py -> build/bdist.linux-armv7l/wheel/biotite/application/viennarna 2023-09-16T22:44:24,175 creating build/bdist.linux-armv7l/wheel/biotite/application/blast 2023-09-16T22:44:24,177 copying build/lib.linux-armv7l-cpython-311/biotite/application/blast/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/application/blast 2023-09-16T22:44:24,178 copying build/lib.linux-armv7l-cpython-311/biotite/application/blast/webapp.py -> build/bdist.linux-armv7l/wheel/biotite/application/blast 2023-09-16T22:44:24,181 copying build/lib.linux-armv7l-cpython-311/biotite/application/blast/alignment.py -> build/bdist.linux-armv7l/wheel/biotite/application/blast 2023-09-16T22:44:24,183 creating build/bdist.linux-armv7l/wheel/biotite/application/autodock 2023-09-16T22:44:24,184 copying build/lib.linux-armv7l-cpython-311/biotite/application/autodock/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/application/autodock 2023-09-16T22:44:24,186 copying build/lib.linux-armv7l-cpython-311/biotite/application/autodock/app.py -> build/bdist.linux-armv7l/wheel/biotite/application/autodock 2023-09-16T22:44:24,189 creating build/bdist.linux-armv7l/wheel/biotite/application/tantan 2023-09-16T22:44:24,191 copying build/lib.linux-armv7l-cpython-311/biotite/application/tantan/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/application/tantan 2023-09-16T22:44:24,193 copying build/lib.linux-armv7l-cpython-311/biotite/application/tantan/app.py -> build/bdist.linux-armv7l/wheel/biotite/application/tantan 2023-09-16T22:44:24,195 creating build/bdist.linux-armv7l/wheel/biotite/application/muscle 2023-09-16T22:44:24,197 copying build/lib.linux-armv7l-cpython-311/biotite/application/muscle/app3.py -> build/bdist.linux-armv7l/wheel/biotite/application/muscle 2023-09-16T22:44:24,198 copying build/lib.linux-armv7l-cpython-311/biotite/application/muscle/__init__.py -> build/bdist.linux-armv7l/wheel/biotite/application/muscle 2023-09-16T22:44:24,201 copying build/lib.linux-armv7l-cpython-311/biotite/application/muscle/app5.py -> build/bdist.linux-armv7l/wheel/biotite/application/muscle 2023-09-16T22:44:24,203 copying build/lib.linux-armv7l-cpython-311/biotite/file.py -> build/bdist.linux-armv7l/wheel/biotite 2023-09-16T22:44:24,205 copying build/lib.linux-armv7l-cpython-311/biotite/copyable.py -> build/bdist.linux-armv7l/wheel/biotite 2023-09-16T22:44:24,207 copying build/lib.linux-armv7l-cpython-311/biotite/temp.py -> build/bdist.linux-armv7l/wheel/biotite 2023-09-16T22:44:24,209 running install_egg_info 2023-09-16T22:44:24,215 Copying src/biotite.egg-info to build/bdist.linux-armv7l/wheel/biotite-0.38.0-py3.11.egg-info 2023-09-16T22:44:24,229 running install_scripts 2023-09-16T22:44:24,277 creating build/bdist.linux-armv7l/wheel/biotite-0.38.0.dist-info/WHEEL 2023-09-16T22:44:24,280 creating '/tmp/pip-wheel-3c0lud5p/.tmp-5fj5tb0p/biotite-0.38.0-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-09-16T22:44:24,283 adding 'biotite/__init__.py' 2023-09-16T22:44:24,285 adding 'biotite/copyable.py' 2023-09-16T22:44:24,287 adding 'biotite/file.py' 2023-09-16T22:44:24,289 adding 'biotite/temp.py' 2023-09-16T22:44:24,291 adding 'biotite/visualize.py' 2023-09-16T22:44:24,294 adding 'biotite/application/__init__.py' 2023-09-16T22:44:24,296 adding 'biotite/application/application.py' 2023-09-16T22:44:24,299 adding 'biotite/application/localapp.py' 2023-09-16T22:44:24,301 adding 'biotite/application/msaapp.py' 2023-09-16T22:44:24,303 adding 'biotite/application/util.py' 2023-09-16T22:44:24,305 adding 'biotite/application/webapp.py' 2023-09-16T22:44:24,307 adding 'biotite/application/autodock/__init__.py' 2023-09-16T22:44:24,310 adding 'biotite/application/autodock/app.py' 2023-09-16T22:44:24,312 adding 'biotite/application/blast/__init__.py' 2023-09-16T22:44:24,314 adding 'biotite/application/blast/alignment.py' 2023-09-16T22:44:24,317 adding 'biotite/application/blast/webapp.py' 2023-09-16T22:44:24,319 adding 'biotite/application/clustalo/__init__.py' 2023-09-16T22:44:24,321 adding 'biotite/application/clustalo/app.py' 2023-09-16T22:44:24,323 adding 'biotite/application/dssp/__init__.py' 2023-09-16T22:44:24,325 adding 'biotite/application/dssp/app.py' 2023-09-16T22:44:24,327 adding 'biotite/application/mafft/__init__.py' 2023-09-16T22:44:24,329 adding 'biotite/application/mafft/app.py' 2023-09-16T22:44:24,332 adding 'biotite/application/muscle/__init__.py' 2023-09-16T22:44:24,334 adding 'biotite/application/muscle/app3.py' 2023-09-16T22:44:24,336 adding 'biotite/application/muscle/app5.py' 2023-09-16T22:44:24,339 adding 'biotite/application/sra/__init__.py' 2023-09-16T22:44:24,341 adding 'biotite/application/sra/app.py' 2023-09-16T22:44:24,343 adding 'biotite/application/tantan/__init__.py' 2023-09-16T22:44:24,345 adding 'biotite/application/tantan/app.py' 2023-09-16T22:44:24,347 adding 'biotite/application/viennarna/__init__.py' 2023-09-16T22:44:24,349 adding 'biotite/application/viennarna/rnaalifold.py' 2023-09-16T22:44:24,352 adding 'biotite/application/viennarna/rnafold.py' 2023-09-16T22:44:24,354 adding 'biotite/application/viennarna/rnaplot.py' 2023-09-16T22:44:24,356 adding 'biotite/application/viennarna/util.py' 2023-09-16T22:44:24,358 adding 'biotite/database/__init__.py' 2023-09-16T22:44:24,360 adding 'biotite/database/error.py' 2023-09-16T22:44:24,362 adding 'biotite/database/entrez/__init__.py' 2023-09-16T22:44:24,364 adding 'biotite/database/entrez/check.py' 2023-09-16T22:44:24,366 adding 'biotite/database/entrez/dbnames.py' 2023-09-16T22:44:24,368 adding 'biotite/database/entrez/download.py' 2023-09-16T22:44:24,370 adding 'biotite/database/entrez/query.py' 2023-09-16T22:44:24,372 adding 'biotite/database/pubchem/__init__.py' 2023-09-16T22:44:24,375 adding 'biotite/database/pubchem/download.py' 2023-09-16T22:44:24,377 adding 'biotite/database/pubchem/error.py' 2023-09-16T22:44:24,380 adding 'biotite/database/pubchem/query.py' 2023-09-16T22:44:24,382 adding 'biotite/database/pubchem/throttle.py' 2023-09-16T22:44:24,384 adding 'biotite/database/rcsb/__init__.py' 2023-09-16T22:44:24,387 adding 'biotite/database/rcsb/download.py' 2023-09-16T22:44:24,391 adding 'biotite/database/rcsb/query.py' 2023-09-16T22:44:24,393 adding 'biotite/database/uniprot/__init__.py' 2023-09-16T22:44:24,395 adding 'biotite/database/uniprot/check.py' 2023-09-16T22:44:24,397 adding 'biotite/database/uniprot/download.py' 2023-09-16T22:44:24,400 adding 'biotite/database/uniprot/query.py' 2023-09-16T22:44:24,402 adding 'biotite/sequence/__init__.py' 2023-09-16T22:44:24,405 adding 'biotite/sequence/alphabet.py' 2023-09-16T22:44:24,409 adding 'biotite/sequence/annotation.py' 2023-09-16T22:44:24,514 adding 'biotite/sequence/codec.c' 2023-09-16T22:44:24,780 adding 'biotite/sequence/codec.cpython-311-arm-linux-gnueabihf.so' 2023-09-16T22:44:24,794 adding 'biotite/sequence/codon.py' 2023-09-16T22:44:24,796 adding 'biotite/sequence/codon_tables.txt' 2023-09-16T22:44:24,798 adding 'biotite/sequence/profile.py' 2023-09-16T22:44:24,800 adding 'biotite/sequence/search.py' 2023-09-16T22:44:24,804 adding 'biotite/sequence/seqtypes.py' 2023-09-16T22:44:24,806 adding 'biotite/sequence/sequence.py' 2023-09-16T22:44:24,809 adding 'biotite/sequence/align/__init__.py' 2023-09-16T22:44:24,812 adding 'biotite/sequence/align/alignment.py' 2023-09-16T22:44:24,977 adding 'biotite/sequence/align/banded.c' 2023-09-16T22:44:25,389 adding 'biotite/sequence/align/banded.cpython-311-arm-linux-gnueabihf.so' 2023-09-16T22:44:25,536 adding 'biotite/sequence/align/kmeralphabet.c' 2023-09-16T22:44:25,909 adding 'biotite/sequence/align/kmeralphabet.cpython-311-arm-linux-gnueabihf.so' 2023-09-16T22:44:26,017 adding 'biotite/sequence/align/kmersimilarity.c' 2023-09-16T22:44:26,243 adding 'biotite/sequence/align/kmersimilarity.cpython-311-arm-linux-gnueabihf.so' 2023-09-16T22:44:26,398 adding 'biotite/sequence/align/kmertable.c' 2023-09-16T22:44:26,783 adding 'biotite/sequence/align/kmertable.cpython-311-arm-linux-gnueabihf.so' 2023-09-16T22:44:27,091 adding 'biotite/sequence/align/localgapped.c' 2023-09-16T22:44:27,909 adding 'biotite/sequence/align/localgapped.cpython-311-arm-linux-gnueabihf.so' 2023-09-16T22:44:28,058 adding 'biotite/sequence/align/localungapped.c' 2023-09-16T22:44:28,339 adding 'biotite/sequence/align/localungapped.cpython-311-arm-linux-gnueabihf.so' 2023-09-16T22:44:28,353 adding 'biotite/sequence/align/matrix.py' 2023-09-16T22:44:28,513 adding 'biotite/sequence/align/multiple.c' 2023-09-16T22:44:29,041 adding 'biotite/sequence/align/multiple.cpython-311-arm-linux-gnueabihf.so' 2023-09-16T22:44:29,237 adding 'biotite/sequence/align/pairwise.c' 2023-09-16T22:44:29,700 adding 'biotite/sequence/align/pairwise.cpython-311-arm-linux-gnueabihf.so' 2023-09-16T22:44:29,725 adding 'biotite/sequence/align/statistics.py' 2023-09-16T22:44:29,814 adding 'biotite/sequence/align/tracetable.c' 2023-09-16T22:44:30,025 adding 'biotite/sequence/align/tracetable.cpython-311-arm-linux-gnueabihf.so' 2023-09-16T22:44:30,036 adding 'biotite/sequence/align/matrix_data/BLOSUM100.mat' 2023-09-16T22:44:30,039 adding 'biotite/sequence/align/matrix_data/BLOSUM30.mat' 2023-09-16T22:44:30,041 adding 'biotite/sequence/align/matrix_data/BLOSUM35.mat' 2023-09-16T22:44:30,043 adding 'biotite/sequence/align/matrix_data/BLOSUM40.mat' 2023-09-16T22:44:30,046 adding 'biotite/sequence/align/matrix_data/BLOSUM45.mat' 2023-09-16T22:44:30,048 adding 'biotite/sequence/align/matrix_data/BLOSUM50.mat' 2023-09-16T22:44:30,050 adding 'biotite/sequence/align/matrix_data/BLOSUM50_13p.mat' 2023-09-16T22:44:30,053 adding 'biotite/sequence/align/matrix_data/BLOSUM50_14.3.mat' 2023-09-16T22:44:30,055 adding 'biotite/sequence/align/matrix_data/BLOSUM50_5.0.mat' 2023-09-16T22:44:30,057 adding 'biotite/sequence/align/matrix_data/BLOSUM55.mat' 2023-09-16T22:44:30,059 adding 'biotite/sequence/align/matrix_data/BLOSUM60.mat' 2023-09-16T22:44:30,061 adding 'biotite/sequence/align/matrix_data/BLOSUM62.mat' 2023-09-16T22:44:30,064 adding 'biotite/sequence/align/matrix_data/BLOSUM62_13p.mat' 2023-09-16T22:44:30,066 adding 'biotite/sequence/align/matrix_data/BLOSUM62_14.3.mat' 2023-09-16T22:44:30,068 adding 'biotite/sequence/align/matrix_data/BLOSUM62_5.0.mat' 2023-09-16T22:44:30,070 adding 'biotite/sequence/align/matrix_data/BLOSUM65.mat' 2023-09-16T22:44:30,072 adding 'biotite/sequence/align/matrix_data/BLOSUM70.mat' 2023-09-16T22:44:30,075 adding 'biotite/sequence/align/matrix_data/BLOSUM75.mat' 2023-09-16T22:44:30,077 adding 'biotite/sequence/align/matrix_data/BLOSUM80.mat' 2023-09-16T22:44:30,079 adding 'biotite/sequence/align/matrix_data/BLOSUM85.mat' 2023-09-16T22:44:30,081 adding 'biotite/sequence/align/matrix_data/BLOSUM90.mat' 2023-09-16T22:44:30,083 adding 'biotite/sequence/align/matrix_data/BLOSUMN.mat' 2023-09-16T22:44:30,086 adding 'biotite/sequence/align/matrix_data/CorBLOSUM49_5.0.mat' 2023-09-16T22:44:30,088 adding 'biotite/sequence/align/matrix_data/CorBLOSUM57_13p.mat' 2023-09-16T22:44:30,090 adding 'biotite/sequence/align/matrix_data/CorBLOSUM57_14.3.mat' 2023-09-16T22:44:30,092 adding 'biotite/sequence/align/matrix_data/CorBLOSUM61_5.0.mat' 2023-09-16T22:44:30,094 adding 'biotite/sequence/align/matrix_data/CorBLOSUM66_13p.mat' 2023-09-16T22:44:30,096 adding 'biotite/sequence/align/matrix_data/CorBLOSUM67_14.3.mat' 2023-09-16T22:44:30,098 adding 'biotite/sequence/align/matrix_data/DAYHOFF.mat' 2023-09-16T22:44:30,100 adding 'biotite/sequence/align/matrix_data/GONNET.mat' 2023-09-16T22:44:30,102 adding 'biotite/sequence/align/matrix_data/IDENTITY.mat' 2023-09-16T22:44:30,103 adding 'biotite/sequence/align/matrix_data/MATCH.mat' 2023-09-16T22:44:30,105 adding 'biotite/sequence/align/matrix_data/NUC.mat' 2023-09-16T22:44:30,106 adding 'biotite/sequence/align/matrix_data/PAM10.mat' 2023-09-16T22:44:30,108 adding 'biotite/sequence/align/matrix_data/PAM100.mat' 2023-09-16T22:44:30,110 adding 'biotite/sequence/align/matrix_data/PAM110.mat' 2023-09-16T22:44:30,111 adding 'biotite/sequence/align/matrix_data/PAM120.mat' 2023-09-16T22:44:30,113 adding 'biotite/sequence/align/matrix_data/PAM130.mat' 2023-09-16T22:44:30,114 adding 'biotite/sequence/align/matrix_data/PAM140.mat' 2023-09-16T22:44:30,116 adding 'biotite/sequence/align/matrix_data/PAM150.mat' 2023-09-16T22:44:30,117 adding 'biotite/sequence/align/matrix_data/PAM160.mat' 2023-09-16T22:44:30,119 adding 'biotite/sequence/align/matrix_data/PAM170.mat' 2023-09-16T22:44:30,121 adding 'biotite/sequence/align/matrix_data/PAM180.mat' 2023-09-16T22:44:30,122 adding 'biotite/sequence/align/matrix_data/PAM190.mat' 2023-09-16T22:44:30,124 adding 'biotite/sequence/align/matrix_data/PAM20.mat' 2023-09-16T22:44:30,125 adding 'biotite/sequence/align/matrix_data/PAM200.mat' 2023-09-16T22:44:30,127 adding 'biotite/sequence/align/matrix_data/PAM210.mat' 2023-09-16T22:44:30,129 adding 'biotite/sequence/align/matrix_data/PAM220.mat' 2023-09-16T22:44:30,130 adding 'biotite/sequence/align/matrix_data/PAM230.mat' 2023-09-16T22:44:30,132 adding 'biotite/sequence/align/matrix_data/PAM240.mat' 2023-09-16T22:44:30,133 adding 'biotite/sequence/align/matrix_data/PAM250.mat' 2023-09-16T22:44:30,135 adding 'biotite/sequence/align/matrix_data/PAM260.mat' 2023-09-16T22:44:30,136 adding 'biotite/sequence/align/matrix_data/PAM270.mat' 2023-09-16T22:44:30,138 adding 'biotite/sequence/align/matrix_data/PAM280.mat' 2023-09-16T22:44:30,140 adding 'biotite/sequence/align/matrix_data/PAM290.mat' 2023-09-16T22:44:30,141 adding 'biotite/sequence/align/matrix_data/PAM30.mat' 2023-09-16T22:44:30,143 adding 'biotite/sequence/align/matrix_data/PAM300.mat' 2023-09-16T22:44:30,144 adding 'biotite/sequence/align/matrix_data/PAM310.mat' 2023-09-16T22:44:30,146 adding 'biotite/sequence/align/matrix_data/PAM320.mat' 2023-09-16T22:44:30,147 adding 'biotite/sequence/align/matrix_data/PAM330.mat' 2023-09-16T22:44:30,149 adding 'biotite/sequence/align/matrix_data/PAM340.mat' 2023-09-16T22:44:30,151 adding 'biotite/sequence/align/matrix_data/PAM350.mat' 2023-09-16T22:44:30,152 adding 'biotite/sequence/align/matrix_data/PAM360.mat' 2023-09-16T22:44:30,154 adding 'biotite/sequence/align/matrix_data/PAM370.mat' 2023-09-16T22:44:30,156 adding 'biotite/sequence/align/matrix_data/PAM380.mat' 2023-09-16T22:44:30,157 adding 'biotite/sequence/align/matrix_data/PAM390.mat' 2023-09-16T22:44:30,159 adding 'biotite/sequence/align/matrix_data/PAM40.mat' 2023-09-16T22:44:30,161 adding 'biotite/sequence/align/matrix_data/PAM400.mat' 2023-09-16T22:44:30,163 adding 'biotite/sequence/align/matrix_data/PAM410.mat' 2023-09-16T22:44:30,164 adding 'biotite/sequence/align/matrix_data/PAM420.mat' 2023-09-16T22:44:30,166 adding 'biotite/sequence/align/matrix_data/PAM430.mat' 2023-09-16T22:44:30,167 adding 'biotite/sequence/align/matrix_data/PAM440.mat' 2023-09-16T22:44:30,169 adding 'biotite/sequence/align/matrix_data/PAM450.mat' 2023-09-16T22:44:30,170 adding 'biotite/sequence/align/matrix_data/PAM460.mat' 2023-09-16T22:44:30,172 adding 'biotite/sequence/align/matrix_data/PAM470.mat' 2023-09-16T22:44:30,173 adding 'biotite/sequence/align/matrix_data/PAM480.mat' 2023-09-16T22:44:30,175 adding 'biotite/sequence/align/matrix_data/PAM490.mat' 2023-09-16T22:44:30,176 adding 'biotite/sequence/align/matrix_data/PAM50.mat' 2023-09-16T22:44:30,178 adding 'biotite/sequence/align/matrix_data/PAM500.mat' 2023-09-16T22:44:30,180 adding 'biotite/sequence/align/matrix_data/PAM60.mat' 2023-09-16T22:44:30,181 adding 'biotite/sequence/align/matrix_data/PAM70.mat' 2023-09-16T22:44:30,183 adding 'biotite/sequence/align/matrix_data/PAM80.mat' 2023-09-16T22:44:30,184 adding 'biotite/sequence/align/matrix_data/PAM90.mat' 2023-09-16T22:44:30,185 adding 'biotite/sequence/align/matrix_data/RBLOSUM52_5.0.mat' 2023-09-16T22:44:30,187 adding 'biotite/sequence/align/matrix_data/RBLOSUM59_13p.mat' 2023-09-16T22:44:30,188 adding 'biotite/sequence/align/matrix_data/RBLOSUM59_14.3.mat' 2023-09-16T22:44:30,190 adding 'biotite/sequence/align/matrix_data/RBLOSUM64_5.0.mat' 2023-09-16T22:44:30,191 adding 'biotite/sequence/align/matrix_data/RBLOSUM69_13p.mat' 2023-09-16T22:44:30,192 adding 'biotite/sequence/align/matrix_data/RBLOSUM69_14.3.mat' 2023-09-16T22:44:30,195 adding 'biotite/sequence/graphics/__init__.py' 2023-09-16T22:44:30,198 adding 'biotite/sequence/graphics/alignment.py' 2023-09-16T22:44:30,200 adding 'biotite/sequence/graphics/colorschemes.py' 2023-09-16T22:44:30,201 adding 'biotite/sequence/graphics/dendrogram.py' 2023-09-16T22:44:30,204 adding 'biotite/sequence/graphics/features.py' 2023-09-16T22:44:30,205 adding 'biotite/sequence/graphics/logo.py' 2023-09-16T22:44:30,208 adding 'biotite/sequence/graphics/plasmid.py' 2023-09-16T22:44:30,211 adding 'biotite/sequence/graphics/color_schemes/autumn.json' 2023-09-16T22:44:30,212 adding 'biotite/sequence/graphics/color_schemes/blossom.json' 2023-09-16T22:44:30,213 adding 'biotite/sequence/graphics/color_schemes/clustalx_dna.json' 2023-09-16T22:44:30,214 adding 'biotite/sequence/graphics/color_schemes/clustalx_protein.json' 2023-09-16T22:44:30,215 adding 'biotite/sequence/graphics/color_schemes/flower.json' 2023-09-16T22:44:30,217 adding 'biotite/sequence/graphics/color_schemes/jalview_buried.json' 2023-09-16T22:44:30,218 adding 'biotite/sequence/graphics/color_schemes/jalview_hydrophobicity.json' 2023-09-16T22:44:30,219 adding 'biotite/sequence/graphics/color_schemes/jalview_prop_helix.json' 2023-09-16T22:44:30,220 adding 'biotite/sequence/graphics/color_schemes/jalview_prop_strand.json' 2023-09-16T22:44:30,222 adding 'biotite/sequence/graphics/color_schemes/jalview_prop_turn.json' 2023-09-16T22:44:30,223 adding 'biotite/sequence/graphics/color_schemes/jalview_taylor.json' 2023-09-16T22:44:30,224 adding 'biotite/sequence/graphics/color_schemes/jalview_zappo.json' 2023-09-16T22:44:30,225 adding 'biotite/sequence/graphics/color_schemes/ocean.json' 2023-09-16T22:44:30,226 adding 'biotite/sequence/graphics/color_schemes/pb_flower.json' 2023-09-16T22:44:30,227 adding 'biotite/sequence/graphics/color_schemes/rainbow_dna.json' 2023-09-16T22:44:30,229 adding 'biotite/sequence/graphics/color_schemes/rainbow_protein.json' 2023-09-16T22:44:30,230 adding 'biotite/sequence/graphics/color_schemes/spring.json' 2023-09-16T22:44:30,231 adding 'biotite/sequence/graphics/color_schemes/sunset.json' 2023-09-16T22:44:30,232 adding 'biotite/sequence/graphics/color_schemes/wither.json' 2023-09-16T22:44:30,234 adding 'biotite/sequence/io/__init__.py' 2023-09-16T22:44:30,236 adding 'biotite/sequence/io/general.py' 2023-09-16T22:44:30,237 adding 'biotite/sequence/io/fasta/__init__.py' 2023-09-16T22:44:30,239 adding 'biotite/sequence/io/fasta/convert.py' 2023-09-16T22:44:30,241 adding 'biotite/sequence/io/fasta/file.py' 2023-09-16T22:44:30,243 adding 'biotite/sequence/io/fastq/__init__.py' 2023-09-16T22:44:30,244 adding 'biotite/sequence/io/fastq/convert.py' 2023-09-16T22:44:30,246 adding 'biotite/sequence/io/fastq/file.py' 2023-09-16T22:44:30,248 adding 'biotite/sequence/io/genbank/__init__.py' 2023-09-16T22:44:30,250 adding 'biotite/sequence/io/genbank/annotation.py' 2023-09-16T22:44:30,253 adding 'biotite/sequence/io/genbank/file.py' 2023-09-16T22:44:30,255 adding 'biotite/sequence/io/genbank/metadata.py' 2023-09-16T22:44:30,256 adding 'biotite/sequence/io/genbank/sequence.py' 2023-09-16T22:44:30,258 adding 'biotite/sequence/io/gff/__init__.py' 2023-09-16T22:44:30,259 adding 'biotite/sequence/io/gff/convert.py' 2023-09-16T22:44:30,262 adding 'biotite/sequence/io/gff/file.py' 2023-09-16T22:44:30,264 adding 'biotite/sequence/phylo/__init__.py' 2023-09-16T22:44:30,355 adding 'biotite/sequence/phylo/nj.c' 2023-09-16T22:44:30,573 adding 'biotite/sequence/phylo/nj.cpython-311-arm-linux-gnueabihf.so' 2023-09-16T22:44:30,671 adding 'biotite/sequence/phylo/tree.c' 2023-09-16T22:44:30,939 adding 'biotite/sequence/phylo/tree.cpython-311-arm-linux-gnueabihf.so' 2023-09-16T22:44:31,039 adding 'biotite/sequence/phylo/upgma.c' 2023-09-16T22:44:31,251 adding 'biotite/sequence/phylo/upgma.cpython-311-arm-linux-gnueabihf.so' 2023-09-16T22:44:31,261 adding 'biotite/structure/__init__.py' 2023-09-16T22:44:31,267 adding 'biotite/structure/atoms.py' 2023-09-16T22:44:31,273 adding 'biotite/structure/basepairs.py' 2023-09-16T22:44:31,444 adding 'biotite/structure/bonds.c' 2023-09-16T22:44:31,964 adding 'biotite/structure/bonds.cpython-311-arm-linux-gnueabihf.so' 2023-09-16T22:44:31,986 adding 'biotite/structure/box.py' 2023-09-16T22:44:32,101 adding 'biotite/structure/celllist.c' 2023-09-16T22:44:32,407 adding 'biotite/structure/celllist.cpython-311-arm-linux-gnueabihf.so' 2023-09-16T22:44:32,419 adding 'biotite/structure/chains.py' 2023-09-16T22:44:32,523 adding 'biotite/structure/charges.c' 2023-09-16T22:44:32,791 adding 'biotite/structure/charges.cpython-311-arm-linux-gnueabihf.so' 2023-09-16T22:44:32,803 adding 'biotite/structure/compare.py' 2023-09-16T22:44:32,805 adding 'biotite/structure/density.py' 2023-09-16T22:44:32,807 adding 'biotite/structure/dotbracket.py' 2023-09-16T22:44:32,810 adding 'biotite/structure/error.py' 2023-09-16T22:44:32,851 adding 'biotite/structure/filter.py' 2023-09-16T22:44:32,854 adding 'biotite/structure/geometry.py' 2023-09-16T22:44:32,856 adding 'biotite/structure/hbond.py' 2023-09-16T22:44:32,858 adding 'biotite/structure/integrity.py' 2023-09-16T22:44:32,860 adding 'biotite/structure/mechanics.py' 2023-09-16T22:44:32,862 adding 'biotite/structure/molecules.py' 2023-09-16T22:44:32,865 adding 'biotite/structure/pseudoknots.py' 2023-09-16T22:44:32,867 adding 'biotite/structure/rdf.py' 2023-09-16T22:44:32,870 adding 'biotite/structure/residues.py' 2023-09-16T22:44:32,871 adding 'biotite/structure/resutil.py' 2023-09-16T22:44:32,969 adding 'biotite/structure/sasa.c' 2023-09-16T22:44:33,228 adding 'biotite/structure/sasa.cpython-311-arm-linux-gnueabihf.so' 2023-09-16T22:44:33,236 adding 'biotite/structure/sse.py' 2023-09-16T22:44:33,238 adding 'biotite/structure/superimpose.py' 2023-09-16T22:44:33,242 adding 'biotite/structure/transform.py' 2023-09-16T22:44:33,244 adding 'biotite/structure/util.py' 2023-09-16T22:44:33,246 adding 'biotite/structure/graphics/__init__.py' 2023-09-16T22:44:33,248 adding 'biotite/structure/graphics/atoms.py' 2023-09-16T22:44:33,251 adding 'biotite/structure/graphics/rna.py' 2023-09-16T22:44:33,254 adding 'biotite/structure/info/__init__.py' 2023-09-16T22:44:33,258 adding 'biotite/structure/info/amino_acids.json' 2023-09-16T22:44:33,260 adding 'biotite/structure/info/amino_acids.py' 2023-09-16T22:44:33,262 adding 'biotite/structure/info/atom_masses.json' 2023-09-16T22:44:33,264 adding 'biotite/structure/info/atoms.py' 2023-09-16T22:44:33,267 adding 'biotite/structure/info/bonds.py' 2023-09-16T22:44:33,270 adding 'biotite/structure/info/carbohydrates.json' 2023-09-16T22:44:33,272 adding 'biotite/structure/info/carbohydrates.py' 2023-09-16T22:44:37,141 adding 'biotite/structure/info/intra_bonds.msgpack' 2023-09-16T22:44:37,318 adding 'biotite/structure/info/link_types.msgpack' 2023-09-16T22:44:37,325 adding 'biotite/structure/info/masses.py' 2023-09-16T22:44:37,327 adding 'biotite/structure/info/misc.py' 2023-09-16T22:44:37,330 adding 'biotite/structure/info/nucleotides.json' 2023-09-16T22:44:37,332 adding 'biotite/structure/info/nucleotides.py' 2023-09-16T22:44:37,334 adding 'biotite/structure/info/radii.py' 2023-09-16T22:44:37,468 adding 'biotite/structure/info/residue_masses.msgpack' 2023-09-16T22:44:37,924 adding 'biotite/structure/info/residue_names.msgpack' 2023-09-16T22:44:47,040 adding 'biotite/structure/info/residues.msgpack' 2023-09-16T22:44:47,660 adding 'biotite/structure/info/standardize.py' 2023-09-16T22:44:47,663 adding 'biotite/structure/io/__init__.py' 2023-09-16T22:44:47,665 adding 'biotite/structure/io/ctab.py' 2023-09-16T22:44:47,667 adding 'biotite/structure/io/general.py' 2023-09-16T22:44:47,671 adding 'biotite/structure/io/trajfile.py' 2023-09-16T22:44:47,674 adding 'biotite/structure/io/dcd/__init__.py' 2023-09-16T22:44:47,676 adding 'biotite/structure/io/dcd/file.py' 2023-09-16T22:44:47,678 adding 'biotite/structure/io/gro/__init__.py' 2023-09-16T22:44:47,681 adding 'biotite/structure/io/gro/file.py' 2023-09-16T22:44:47,684 adding 'biotite/structure/io/mmtf/__init__.py' 2023-09-16T22:44:47,687 adding 'biotite/structure/io/mmtf/assembly.py' 2023-09-16T22:44:47,738 adding 'biotite/structure/io/mmtf/convertarray.c' 2023-09-16T22:44:47,881 adding 'biotite/structure/io/mmtf/convertarray.cpython-311-arm-linux-gnueabihf.so' 2023-09-16T22:44:48,000 adding 'biotite/structure/io/mmtf/convertfile.c' 2023-09-16T22:44:48,307 adding 'biotite/structure/io/mmtf/convertfile.cpython-311-arm-linux-gnueabihf.so' 2023-09-16T22:44:48,421 adding 'biotite/structure/io/mmtf/decode.c' 2023-09-16T22:44:48,705 adding 'biotite/structure/io/mmtf/decode.cpython-311-arm-linux-gnueabihf.so' 2023-09-16T22:44:48,812 adding 'biotite/structure/io/mmtf/encode.c' 2023-09-16T22:44:49,075 adding 'biotite/structure/io/mmtf/encode.cpython-311-arm-linux-gnueabihf.so' 2023-09-16T22:44:49,087 adding 'biotite/structure/io/mmtf/file.py' 2023-09-16T22:44:49,090 adding 'biotite/structure/io/mol/__init__.py' 2023-09-16T22:44:49,092 adding 'biotite/structure/io/mol/convert.py' 2023-09-16T22:44:49,094 adding 'biotite/structure/io/mol/file.py' 2023-09-16T22:44:49,096 adding 'biotite/structure/io/netcdf/__init__.py' 2023-09-16T22:44:49,097 adding 'biotite/structure/io/netcdf/file.py' 2023-09-16T22:44:49,099 adding 'biotite/structure/io/npz/__init__.py' 2023-09-16T22:44:49,101 adding 'biotite/structure/io/npz/file.py' 2023-09-16T22:44:49,103 adding 'biotite/structure/io/pdb/__init__.py' 2023-09-16T22:44:49,104 adding 'biotite/structure/io/pdb/convert.py' 2023-09-16T22:44:49,110 adding 'biotite/structure/io/pdb/file.py' 2023-09-16T22:44:49,195 adding 'biotite/structure/io/pdb/hybrid36.c' 2023-09-16T22:44:49,403 adding 'biotite/structure/io/pdb/hybrid36.cpython-311-arm-linux-gnueabihf.so' 2023-09-16T22:44:49,412 adding 'biotite/structure/io/pdbqt/__init__.py' 2023-09-16T22:44:49,413 adding 'biotite/structure/io/pdbqt/convert.py' 2023-09-16T22:44:49,416 adding 'biotite/structure/io/pdbqt/file.py' 2023-09-16T22:44:49,418 adding 'biotite/structure/io/pdbx/__init__.py' 2023-09-16T22:44:49,423 adding 'biotite/structure/io/pdbx/convert.py' 2023-09-16T22:44:49,426 adding 'biotite/structure/io/pdbx/file.py' 2023-09-16T22:44:49,428 adding 'biotite/structure/io/tng/__init__.py' 2023-09-16T22:44:49,430 adding 'biotite/structure/io/tng/file.py' 2023-09-16T22:44:49,431 adding 'biotite/structure/io/trr/__init__.py' 2023-09-16T22:44:49,433 adding 'biotite/structure/io/trr/file.py' 2023-09-16T22:44:49,435 adding 'biotite/structure/io/xtc/__init__.py' 2023-09-16T22:44:49,436 adding 'biotite/structure/io/xtc/file.py' 2023-09-16T22:44:49,438 adding 'biotite-0.38.0.dist-info/LICENSE.rst' 2023-09-16T22:44:49,440 adding 'biotite-0.38.0.dist-info/METADATA' 2023-09-16T22:44:49,441 adding 'biotite-0.38.0.dist-info/WHEEL' 2023-09-16T22:44:49,442 adding 'biotite-0.38.0.dist-info/top_level.txt' 2023-09-16T22:44:49,447 adding 'biotite-0.38.0.dist-info/RECORD' 2023-09-16T22:44:49,961 removing build/bdist.linux-armv7l/wheel 2023-09-16T22:44:50,284 Building wheel for biotite (pyproject.toml): finished with status 'done' 2023-09-16T22:44:51,982 Created wheel for biotite: filename=biotite-0.38.0-cp311-cp311-linux_armv7l.whl size=47544463 sha256=91039a2f020d059e9dd9508a06791d90515f951c5b6ea4b0de9613ad6ae0972e 2023-09-16T22:44:51,983 Stored in directory: /home/piwheels/.cache/pip/wheels/63/a1/5c/e7b4abcde1c5a85b7f829adcc0d4098943f61a8c6b9792f40f 2023-09-16T22:44:52,013 Building wheel for numpy (pyproject.toml): started 2023-09-16T22:44:52,014 Running command Building wheel for numpy (pyproject.toml) 2023-09-16T22:44:52,761 setup.py:63: RuntimeWarning: NumPy 1.21.0 may not yet support Python 3.11. 2023-09-16T22:44:52,762 warnings.warn( 2023-09-16T22:44:52,764 Running from numpy source directory. 2023-09-16T22:45:33,858 Processing numpy/random/_bounded_integers.pxd.in 2023-09-16T22:45:33,859 Processing numpy/random/_bounded_integers.pyx.in 2023-09-16T22:45:33,859 Processing numpy/random/_sfc64.pyx 2023-09-16T22:45:33,860 Processing numpy/random/_philox.pyx 2023-09-16T22:45:33,861 Processing numpy/random/_pcg64.pyx 2023-09-16T22:45:33,862 Processing numpy/random/_common.pyx 2023-09-16T22:45:33,863 Processing numpy/random/bit_generator.pyx 2023-09-16T22:45:33,864 Processing numpy/random/_generator.pyx 2023-09-16T22:45:33,865 Processing numpy/random/_mt19937.pyx 2023-09-16T22:45:33,866 Processing numpy/random/mtrand.pyx 2023-09-16T22:45:34,192 Cythonizing sources 2023-09-16T22:45:34,192 blas_opt_info: 2023-09-16T22:45:34,195 blas_mkl_info: 2023-09-16T22:45:34,195 customize UnixCCompiler 2023-09-16T22:45:34,197 libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/arm-linux-gnueabihf'] 2023-09-16T22:45:34,198 NOT AVAILABLE 2023-09-16T22:45:34,200 blis_info: 2023-09-16T22:45:34,200 libraries blis not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/arm-linux-gnueabihf'] 2023-09-16T22:45:34,201 NOT AVAILABLE 2023-09-16T22:45:34,203 openblas_info: 2023-09-16T22:45:34,204 libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/arm-linux-gnueabihf'] 2023-09-16T22:45:34,205 NOT AVAILABLE 2023-09-16T22:45:34,206 accelerate_info: 2023-09-16T22:45:34,207 NOT AVAILABLE 2023-09-16T22:45:34,209 atlas_3_10_blas_threads_info: 2023-09-16T22:45:34,210 Setting PTATLAS=ATLAS 2023-09-16T22:45:34,219 libraries tatlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/arm-linux-gnueabihf/atlas', '/usr/lib/arm-linux-gnueabihf'] 2023-09-16T22:45:34,220 NOT AVAILABLE 2023-09-16T22:45:34,222 atlas_3_10_blas_info: 2023-09-16T22:45:34,235 libraries satlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/arm-linux-gnueabihf/atlas', '/usr/lib/arm-linux-gnueabihf'] 2023-09-16T22:45:34,236 NOT AVAILABLE 2023-09-16T22:45:34,238 atlas_blas_threads_info: 2023-09-16T22:45:34,239 Setting PTATLAS=ATLAS 2023-09-16T22:45:34,252 libraries ptf77blas,ptcblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/arm-linux-gnueabihf/atlas', '/usr/lib/arm-linux-gnueabihf'] 2023-09-16T22:45:34,253 NOT AVAILABLE 2023-09-16T22:45:34,255 atlas_blas_info: 2023-09-16T22:45:34,407 get_default_fcompiler: matching types: '['gnu95', 'intel', 'lahey', 'pg', 'nv', 'absoft', 'nag', 'vast', 'compaq', 'intele', 'intelem', 'gnu', 'g95', 'pathf95', 'nagfor', 'fujitsu']' 2023-09-16T22:45:34,408 customize Gnu95FCompiler 2023-09-16T22:45:34,411 Found executable /usr/bin/gfortran 2023-09-16T22:45:34,431 customize Gnu95FCompiler 2023-09-16T22:45:34,451 customize Gnu95FCompiler using config 2023-09-16T22:45:34,452 compiling '_configtest.c': 2023-09-16T22:45:34,453 /* This file is generated from numpy/distutils/system_info.py */ 2023-09-16T22:45:34,454 void ATL_buildinfo(void); 2023-09-16T22:45:34,455 int main(void) { 2023-09-16T22:45:34,456 ATL_buildinfo(); 2023-09-16T22:45:34,457 return 0; 2023-09-16T22:45:34,458 } 2023-09-16T22:45:34,460 C compiler: arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-09-16T22:45:34,462 compile options: '-c' 2023-09-16T22:45:34,463 arm-linux-gnueabihf-gcc: _configtest.c 2023-09-16T22:45:34,525 arm-linux-gnueabihf-gcc _configtest.o -L/usr/lib/arm-linux-gnueabihf -lf77blas -lcblas -latlas -o _configtest 2023-09-16T22:45:34,702 FOUND: 2023-09-16T22:45:34,703 language = c 2023-09-16T22:45:34,704 define_macros = [('HAVE_CBLAS', None), ('NO_ATLAS_INFO', -1)] 2023-09-16T22:45:34,705 libraries = ['f77blas', 'cblas', 'atlas', 'f77blas', 'cblas'] 2023-09-16T22:45:34,706 library_dirs = ['/usr/lib/arm-linux-gnueabihf'] 2023-09-16T22:45:34,709 FOUND: 2023-09-16T22:45:34,710 language = c 2023-09-16T22:45:34,711 define_macros = [('HAVE_CBLAS', None), ('NO_ATLAS_INFO', -1)] 2023-09-16T22:45:34,712 libraries = ['f77blas', 'cblas', 'atlas', 'f77blas', 'cblas'] 2023-09-16T22:45:34,713 library_dirs = ['/usr/lib/arm-linux-gnueabihf'] 2023-09-16T22:45:34,810 non-existing path in 'numpy/distutils': 'site.cfg' 2023-09-16T22:45:34,811 lapack_opt_info: 2023-09-16T22:45:34,811 lapack_mkl_info: 2023-09-16T22:45:34,812 libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/arm-linux-gnueabihf'] 2023-09-16T22:45:34,813 NOT AVAILABLE 2023-09-16T22:45:34,815 openblas_lapack_info: 2023-09-16T22:45:34,816 libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/arm-linux-gnueabihf'] 2023-09-16T22:45:34,816 NOT AVAILABLE 2023-09-16T22:45:34,818 openblas_clapack_info: 2023-09-16T22:45:34,819 libraries openblas,lapack not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/arm-linux-gnueabihf'] 2023-09-16T22:45:34,820 NOT AVAILABLE 2023-09-16T22:45:34,822 flame_info: 2023-09-16T22:45:34,822 libraries flame not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/arm-linux-gnueabihf'] 2023-09-16T22:45:34,823 NOT AVAILABLE 2023-09-16T22:45:34,825 atlas_3_10_threads_info: 2023-09-16T22:45:34,825 Setting PTATLAS=ATLAS 2023-09-16T22:45:34,834 libraries lapack_atlas not found in /usr/local/lib 2023-09-16T22:45:34,835 libraries tatlas,tatlas not found in /usr/local/lib 2023-09-16T22:45:34,836 libraries lapack_atlas not found in /usr/lib 2023-09-16T22:45:34,837 libraries tatlas,tatlas not found in /usr/lib 2023-09-16T22:45:34,837 libraries lapack_atlas not found in /usr/lib/arm-linux-gnueabihf/atlas 2023-09-16T22:45:34,838 libraries tatlas,tatlas not found in /usr/lib/arm-linux-gnueabihf/atlas 2023-09-16T22:45:34,839 libraries tatlas,tatlas not found in /usr/lib/arm-linux-gnueabihf 2023-09-16T22:45:34,840 2023-09-16T22:45:34,841 NOT AVAILABLE 2023-09-16T22:45:34,842 atlas_3_10_info: 2023-09-16T22:45:34,850 libraries lapack_atlas not found in /usr/local/lib 2023-09-16T22:45:34,851 libraries satlas,satlas not found in /usr/local/lib 2023-09-16T22:45:34,852 libraries lapack_atlas not found in /usr/lib 2023-09-16T22:45:34,853 libraries satlas,satlas not found in /usr/lib 2023-09-16T22:45:34,854 libraries lapack_atlas not found in /usr/lib/arm-linux-gnueabihf/atlas 2023-09-16T22:45:34,855 libraries satlas,satlas not found in /usr/lib/arm-linux-gnueabihf/atlas 2023-09-16T22:45:34,855 libraries satlas,satlas not found in /usr/lib/arm-linux-gnueabihf 2023-09-16T22:45:34,856 2023-09-16T22:45:34,857 NOT AVAILABLE 2023-09-16T22:45:34,858 atlas_threads_info: 2023-09-16T22:45:34,859 Setting PTATLAS=ATLAS 2023-09-16T22:45:34,866 libraries lapack_atlas not found in /usr/local/lib 2023-09-16T22:45:34,867 libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib 2023-09-16T22:45:34,868 libraries lapack_atlas not found in /usr/lib 2023-09-16T22:45:34,869 libraries ptf77blas,ptcblas,atlas not found in /usr/lib 2023-09-16T22:45:34,870 libraries lapack_atlas not found in /usr/lib/arm-linux-gnueabihf/atlas 2023-09-16T22:45:34,870 libraries ptf77blas,ptcblas,atlas not found in /usr/lib/arm-linux-gnueabihf/atlas 2023-09-16T22:45:34,871 libraries ptf77blas,ptcblas,atlas not found in /usr/lib/arm-linux-gnueabihf 2023-09-16T22:45:34,872 2023-09-16T22:45:34,873 NOT AVAILABLE 2023-09-16T22:45:34,874 atlas_info: 2023-09-16T22:45:34,882 libraries lapack_atlas not found in /usr/local/lib 2023-09-16T22:45:34,883 libraries f77blas,cblas,atlas not found in /usr/local/lib 2023-09-16T22:45:34,884 libraries lapack_atlas not found in /usr/lib 2023-09-16T22:45:34,885 libraries f77blas,cblas,atlas not found in /usr/lib 2023-09-16T22:45:34,886 libraries lapack_atlas not found in /usr/lib/arm-linux-gnueabihf/atlas 2023-09-16T22:45:34,886 libraries f77blas,cblas,atlas not found in /usr/lib/arm-linux-gnueabihf/atlas 2023-09-16T22:45:34,895 2023-09-16T22:45:34,898 get_default_fcompiler: matching types: '['gnu95', 'intel', 'lahey', 'pg', 'nv', 'absoft', 'nag', 'vast', 'compaq', 'intele', 'intelem', 'gnu', 'g95', 'pathf95', 'nagfor', 'fujitsu']' 2023-09-16T22:45:34,899 customize Gnu95FCompiler 2023-09-16T22:45:34,919 customize Gnu95FCompiler 2023-09-16T22:45:34,939 customize Gnu95FCompiler using config 2023-09-16T22:45:34,940 compiling '_configtest.c': 2023-09-16T22:45:34,942 /* This file is generated from numpy/distutils/system_info.py */ 2023-09-16T22:45:34,943 void ATL_buildinfo(void); 2023-09-16T22:45:34,944 int main(void) { 2023-09-16T22:45:34,945 ATL_buildinfo(); 2023-09-16T22:45:34,946 return 0; 2023-09-16T22:45:34,946 } 2023-09-16T22:45:34,948 C compiler: arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-09-16T22:45:34,950 compile options: '-c' 2023-09-16T22:45:34,951 arm-linux-gnueabihf-gcc: _configtest.c 2023-09-16T22:45:35,015 arm-linux-gnueabihf-gcc _configtest.o -L/usr/lib/arm-linux-gnueabihf -lf77blas -lcblas -latlas -o _configtest 2023-09-16T22:45:35,209 FOUND: 2023-09-16T22:45:35,210 language = f77 2023-09-16T22:45:35,211 libraries = ['lapack', 'f77blas', 'cblas', 'atlas', 'f77blas', 'cblas'] 2023-09-16T22:45:35,212 library_dirs = ['/usr/lib/arm-linux-gnueabihf'] 2023-09-16T22:45:35,214 define_macros = [('NO_ATLAS_INFO', -1)] 2023-09-16T22:45:35,216 FOUND: 2023-09-16T22:45:35,217 language = f77 2023-09-16T22:45:35,218 libraries = ['lapack', 'f77blas', 'cblas', 'atlas', 'f77blas', 'cblas'] 2023-09-16T22:45:35,219 library_dirs = ['/usr/lib/arm-linux-gnueabihf'] 2023-09-16T22:45:35,221 define_macros = [('NO_ATLAS_INFO', -1)] 2023-09-16T22:45:35,297 Warning: attempted relative import with no known parent package 2023-09-16T22:45:35,302 /tmp/pip-build-env-pr8rc_p8/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:275: UserWarning: Unknown distribution option: 'define_macros' 2023-09-16T22:45:35,303 warnings.warn(msg) 2023-09-16T22:45:35,306 running bdist_wheel 2023-09-16T22:45:35,307 running build 2023-09-16T22:45:35,308 running config_cc 2023-09-16T22:45:35,309 unifing config_cc, config, build_clib, build_ext, build commands --compiler options 2023-09-16T22:45:35,310 running config_fc 2023-09-16T22:45:35,311 unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options 2023-09-16T22:45:35,312 running build_src 2023-09-16T22:45:35,313 build_src 2023-09-16T22:45:35,314 building py_modules sources 2023-09-16T22:45:35,314 creating build 2023-09-16T22:45:35,315 creating build/src.linux-armv7l-3.11 2023-09-16T22:45:35,316 creating build/src.linux-armv7l-3.11/numpy 2023-09-16T22:45:35,317 creating build/src.linux-armv7l-3.11/numpy/distutils 2023-09-16T22:45:35,318 building library "npymath" sources 2023-09-16T22:45:35,917 creating build/src.linux-armv7l-3.11/numpy/core 2023-09-16T22:45:35,919 creating build/src.linux-armv7l-3.11/numpy/core/src 2023-09-16T22:45:35,920 creating build/src.linux-armv7l-3.11/numpy/core/src/npymath 2023-09-16T22:45:35,921 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/npymath/npy_math_internal.h 2023-09-16T22:45:35,936 adding 'build/src.linux-armv7l-3.11/numpy/core/src/npymath' to include_dirs. 2023-09-16T22:45:35,937 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/npymath/ieee754.c 2023-09-16T22:45:35,941 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/npymath/npy_math_complex.c 2023-09-16T22:45:35,971 None - nothing done with h_files = ['build/src.linux-armv7l-3.11/numpy/core/src/npymath/npy_math_internal.h'] 2023-09-16T22:45:35,972 building library "npyrandom" sources 2023-09-16T22:45:35,973 building extension "numpy.core._multiarray_tests" sources 2023-09-16T22:45:35,973 creating build/src.linux-armv7l-3.11/numpy/core/src/multiarray 2023-09-16T22:45:35,974 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/multiarray/_multiarray_tests.c 2023-09-16T22:45:35,988 building extension "numpy.core._multiarray_umath" sources 2023-09-16T22:45:59,521 non-existing path in 'numpy/core': 'build/src.linux-armv7l-3.11/numpy/core/src/common' 2023-09-16T22:45:59,522 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/multiarray/arraytypes.c 2023-09-16T22:45:59,677 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/multiarray/einsum.c 2023-09-16T22:45:59,683 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/multiarray/einsum_sumprod.c 2023-09-16T22:46:00,601 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/multiarray/lowlevel_strided_loops.c 2023-09-16T22:46:03,302 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/multiarray/nditer_templ.c 2023-09-16T22:46:03,385 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/multiarray/scalartypes.c 2023-09-16T22:46:03,586 creating build/src.linux-armv7l-3.11/numpy/core/src/common 2023-09-16T22:46:03,588 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/common/npy_sort.h 2023-09-16T22:46:03,594 adding 'build/src.linux-armv7l-3.11/numpy/core/src/common' to include_dirs. 2023-09-16T22:46:03,595 creating build/src.linux-armv7l-3.11/numpy/core/src/npysort 2023-09-16T22:46:03,597 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/npysort/quicksort.c 2023-09-16T22:46:03,613 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/npysort/mergesort.c 2023-09-16T22:46:03,626 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/npysort/timsort.c 2023-09-16T22:46:03,691 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/npysort/heapsort.c 2023-09-16T22:46:03,702 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/npysort/radixsort.c 2023-09-16T22:46:03,715 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/common/npy_partition.h 2023-09-16T22:46:03,722 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/npysort/selection.c 2023-09-16T22:46:03,794 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/common/npy_binsearch.h 2023-09-16T22:46:03,806 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/npysort/binsearch.c 2023-09-16T22:46:03,835 creating build/src.linux-armv7l-3.11/numpy/core/src/umath 2023-09-16T22:46:03,837 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/umath/funcs.inc 2023-09-16T22:46:03,843 adding 'build/src.linux-armv7l-3.11/numpy/core/src/umath' to include_dirs. 2023-09-16T22:46:03,845 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/umath/simd.inc 2023-09-16T22:46:03,910 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/umath/loops.h 2023-09-16T22:46:03,963 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_utils.h 2023-09-16T22:46:03,970 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/umath/loops.c 2023-09-16T22:46:04,088 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_unary_fp.dispatch.c 2023-09-16T22:46:04,158 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_arithm_fp.dispatch.c 2023-09-16T22:46:04,202 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_arithmetic.dispatch.c 2023-09-16T22:46:04,213 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_trigonometric.dispatch.c 2023-09-16T22:46:04,218 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_exponent_log.dispatch.c 2023-09-16T22:46:04,230 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/umath/matmul.h 2023-09-16T22:46:04,233 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/umath/matmul.c 2023-09-16T22:46:04,257 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/umath/clip.h 2023-09-16T22:46:04,260 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/umath/clip.c 2023-09-16T22:46:04,268 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/umath/scalarmath.c 2023-09-16T22:46:04,388 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/common/templ_common.h 2023-09-16T22:46:04,391 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/common/npy_cpu_features.c 2023-09-16T22:46:04,400 numpy.core - nothing done with h_files = ['build/src.linux-armv7l-3.11/numpy/core/src/common/npy_sort.h', 'build/src.linux-armv7l-3.11/numpy/core/src/common/npy_partition.h', 'build/src.linux-armv7l-3.11/numpy/core/src/common/npy_binsearch.h', 'build/src.linux-armv7l-3.11/numpy/core/src/umath/funcs.inc', 'build/src.linux-armv7l-3.11/numpy/core/src/umath/simd.inc', 'build/src.linux-armv7l-3.11/numpy/core/src/umath/loops.h', 'build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_utils.h', 'build/src.linux-armv7l-3.11/numpy/core/src/umath/matmul.h', 'build/src.linux-armv7l-3.11/numpy/core/src/umath/clip.h', 'build/src.linux-armv7l-3.11/numpy/core/src/common/templ_common.h', 'build/src.linux-armv7l-3.11/numpy/core/include/numpy/config.h', 'build/src.linux-armv7l-3.11/numpy/core/include/numpy/_numpyconfig.h', 'build/src.linux-armv7l-3.11/numpy/core/include/numpy/__multiarray_api.h', 'build/src.linux-armv7l-3.11/numpy/core/include/numpy/__ufunc_api.h'] 2023-09-16T22:46:04,401 building extension "numpy.core._umath_tests" sources 2023-09-16T22:46:04,403 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/umath/_umath_tests.c 2023-09-16T22:46:04,408 building extension "numpy.core._rational_tests" sources 2023-09-16T22:46:04,409 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/umath/_rational_tests.c 2023-09-16T22:46:04,415 building extension "numpy.core._struct_ufunc_tests" sources 2023-09-16T22:46:04,416 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/umath/_struct_ufunc_tests.c 2023-09-16T22:46:04,418 building extension "numpy.core._operand_flag_tests" sources 2023-09-16T22:46:04,419 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/umath/_operand_flag_tests.c 2023-09-16T22:46:04,420 building extension "numpy.core._simd" sources 2023-09-16T22:46:04,423 creating build/src.linux-armv7l-3.11/numpy/core/src/_simd 2023-09-16T22:46:04,424 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/_simd/_simd_inc.h 2023-09-16T22:46:04,429 adding 'build/src.linux-armv7l-3.11/numpy/core/src/_simd' to include_dirs. 2023-09-16T22:46:04,430 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/_simd/_simd_data.inc 2023-09-16T22:46:04,436 conv_template:> build/src.linux-armv7l-3.11/numpy/core/src/_simd/_simd.dispatch.c 2023-09-16T22:46:04,523 numpy.core - nothing done with h_files = ['build/src.linux-armv7l-3.11/numpy/core/src/_simd/_simd_inc.h', 'build/src.linux-armv7l-3.11/numpy/core/src/_simd/_simd_data.inc'] 2023-09-16T22:46:04,524 building extension "numpy.fft._pocketfft_internal" sources 2023-09-16T22:46:04,526 building extension "numpy.linalg.lapack_lite" sources 2023-09-16T22:46:04,527 creating build/src.linux-armv7l-3.11/numpy/linalg 2023-09-16T22:46:04,528 building extension "numpy.linalg._umath_linalg" sources 2023-09-16T22:46:04,529 conv_template:> build/src.linux-armv7l-3.11/numpy/linalg/umath_linalg.c 2023-09-16T22:46:04,561 building extension "numpy.random._mt19937" sources 2023-09-16T22:46:04,562 building extension "numpy.random._philox" sources 2023-09-16T22:46:04,563 building extension "numpy.random._pcg64" sources 2023-09-16T22:46:04,565 building extension "numpy.random._sfc64" sources 2023-09-16T22:46:04,566 building extension "numpy.random._common" sources 2023-09-16T22:46:04,567 building extension "numpy.random.bit_generator" sources 2023-09-16T22:46:04,568 building extension "numpy.random._generator" sources 2023-09-16T22:46:04,569 building extension "numpy.random._bounded_integers" sources 2023-09-16T22:46:04,571 building extension "numpy.random.mtrand" sources 2023-09-16T22:46:04,572 building data_files sources 2023-09-16T22:46:04,626 build_src: building npy-pkg config files 2023-09-16T22:46:04,632 running build_py 2023-09-16T22:46:04,637 creating build/lib.linux-armv7l-3.11 2023-09-16T22:46:04,638 creating build/lib.linux-armv7l-3.11/numpy 2023-09-16T22:46:04,640 copying numpy/_globals.py -> build/lib.linux-armv7l-3.11/numpy 2023-09-16T22:46:04,642 copying numpy/dual.py -> build/lib.linux-armv7l-3.11/numpy 2023-09-16T22:46:04,644 copying numpy/_version.py -> build/lib.linux-armv7l-3.11/numpy 2023-09-16T22:46:04,646 copying numpy/__init__.py -> build/lib.linux-armv7l-3.11/numpy 2023-09-16T22:46:04,648 copying numpy/setup.py -> build/lib.linux-armv7l-3.11/numpy 2023-09-16T22:46:04,651 copying numpy/_distributor_init.py -> build/lib.linux-armv7l-3.11/numpy 2023-09-16T22:46:04,653 copying numpy/ctypeslib.py -> build/lib.linux-armv7l-3.11/numpy 2023-09-16T22:46:04,655 copying numpy/matlib.py -> build/lib.linux-armv7l-3.11/numpy 2023-09-16T22:46:04,658 copying numpy/version.py -> build/lib.linux-armv7l-3.11/numpy 2023-09-16T22:46:04,659 copying numpy/conftest.py -> build/lib.linux-armv7l-3.11/numpy 2023-09-16T22:46:04,662 copying numpy/_pytesttester.py -> build/lib.linux-armv7l-3.11/numpy 2023-09-16T22:46:04,664 copying build/src.linux-armv7l-3.11/numpy/__config__.py -> build/lib.linux-armv7l-3.11/numpy 2023-09-16T22:46:04,667 creating build/lib.linux-armv7l-3.11/numpy/compat 2023-09-16T22:46:04,668 copying numpy/compat/py3k.py -> build/lib.linux-armv7l-3.11/numpy/compat 2023-09-16T22:46:04,670 copying numpy/compat/__init__.py -> build/lib.linux-armv7l-3.11/numpy/compat 2023-09-16T22:46:04,672 copying numpy/compat/setup.py -> build/lib.linux-armv7l-3.11/numpy/compat 2023-09-16T22:46:04,674 copying numpy/compat/_inspect.py -> build/lib.linux-armv7l-3.11/numpy/compat 2023-09-16T22:46:04,676 creating build/lib.linux-armv7l-3.11/numpy/compat/tests 2023-09-16T22:46:04,677 copying numpy/compat/tests/__init__.py -> build/lib.linux-armv7l-3.11/numpy/compat/tests 2023-09-16T22:46:04,679 copying numpy/compat/tests/test_compat.py -> build/lib.linux-armv7l-3.11/numpy/compat/tests 2023-09-16T22:46:04,682 creating build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,683 copying numpy/core/_dtype.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,686 copying numpy/core/shape_base.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,689 copying numpy/core/_asarray.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,691 copying numpy/core/einsumfunc.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,694 copying numpy/core/__init__.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,697 copying numpy/core/_type_aliases.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,700 copying numpy/core/_string_helpers.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,703 copying numpy/core/_methods.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,705 copying numpy/core/setup_common.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,708 copying numpy/core/setup.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,711 copying numpy/core/_ufunc_config.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,713 copying numpy/core/getlimits.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,716 copying numpy/core/_exceptions.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,718 copying numpy/core/memmap.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,721 copying numpy/core/_add_newdocs.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,727 copying numpy/core/_add_newdocs_scalars.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,729 copying numpy/core/numerictypes.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,731 copying numpy/core/records.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,734 copying numpy/core/_dtype_ctypes.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,738 copying numpy/core/arrayprint.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,741 copying numpy/core/_internal.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,744 copying numpy/core/multiarray.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,747 copying numpy/core/function_base.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,750 copying numpy/core/fromnumeric.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,754 copying numpy/core/defchararray.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,758 copying numpy/core/machar.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,760 copying numpy/core/numeric.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,764 copying numpy/core/overrides.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,767 copying numpy/core/umath.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,768 copying numpy/core/cversions.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,770 copying numpy/core/umath_tests.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,772 copying numpy/core/code_generators/generate_numpy_api.py -> build/lib.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:04,780 creating build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,781 copying numpy/core/tests/test_array_coercion.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,784 copying numpy/core/tests/test_api.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,787 copying numpy/core/tests/test_regression.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,791 copying numpy/core/tests/test_overrides.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,793 copying numpy/core/tests/test_indexing.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,796 copying numpy/core/tests/test_item_selection.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,798 copying numpy/core/tests/test_scalarinherit.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,800 copying numpy/core/tests/test_extint128.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,803 copying numpy/core/tests/test_simd.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,805 copying numpy/core/tests/test_argparse.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,806 copying numpy/core/tests/test_ufunc.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,811 copying numpy/core/tests/test_casting_unittests.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,813 copying numpy/core/tests/__init__.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,815 copying numpy/core/tests/test_cython.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,817 copying numpy/core/tests/test_abc.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,819 copying numpy/core/tests/test_unicode.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,821 copying numpy/core/tests/test_getlimits.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,824 copying numpy/core/tests/test_dtype.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,827 copying numpy/core/tests/test_protocols.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,829 copying numpy/core/tests/test_scalarbuffer.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,831 copying numpy/core/tests/test_half.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,834 copying numpy/core/tests/test_arrayprint.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,837 copying numpy/core/tests/test_machar.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,839 copying numpy/core/tests/test_errstate.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,842 copying numpy/core/tests/test_conversion_utils.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,845 copying numpy/core/tests/test_function_base.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,847 copying numpy/core/tests/test_einsum.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,851 copying numpy/core/tests/test_simd_module.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,853 copying numpy/core/tests/test_deprecations.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,856 copying numpy/core/tests/test_arraymethod.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,858 copying numpy/core/tests/test_longdouble.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,860 copying numpy/core/tests/test_shape_base.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,863 copying numpy/core/tests/test_mem_overlap.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,866 copying numpy/core/tests/test_numerictypes.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,869 copying numpy/core/tests/test_multiarray.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,876 copying numpy/core/tests/test_scalar_methods.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,878 copying numpy/core/tests/test_print.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,880 copying numpy/core/tests/test_cpu_features.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,883 copying numpy/core/tests/test_scalarprint.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,886 copying numpy/core/tests/test_indexerrors.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,888 copying numpy/core/tests/test_memmap.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,890 copying numpy/core/tests/test_records.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,893 copying numpy/core/tests/_locales.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,895 copying numpy/core/tests/test_datetime.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,899 copying numpy/core/tests/test_umath_accuracy.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,901 copying numpy/core/tests/test_scalar_ctors.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,903 copying numpy/core/tests/test__exceptions.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,905 copying numpy/core/tests/test_umath.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,910 copying numpy/core/tests/test_nditer.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,914 copying numpy/core/tests/test_cpu_dispatcher.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,916 copying numpy/core/tests/test_scalarmath.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,919 copying numpy/core/tests/test_numeric.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,927 copying numpy/core/tests/test_defchararray.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,930 copying numpy/core/tests/test_umath_complex.py -> build/lib.linux-armv7l-3.11/numpy/core/tests 2023-09-16T22:46:04,934 creating build/lib.linux-armv7l-3.11/numpy/distutils 2023-09-16T22:46:04,935 copying numpy/distutils/pathccompiler.py -> build/lib.linux-armv7l-3.11/numpy/distutils 2023-09-16T22:46:04,937 copying numpy/distutils/exec_command.py -> build/lib.linux-armv7l-3.11/numpy/distutils 2023-09-16T22:46:04,939 copying numpy/distutils/msvccompiler.py -> build/lib.linux-armv7l-3.11/numpy/distutils 2023-09-16T22:46:04,941 copying numpy/distutils/_shell_utils.py -> build/lib.linux-armv7l-3.11/numpy/distutils 2023-09-16T22:46:04,943 copying numpy/distutils/numpy_distribution.py -> build/lib.linux-armv7l-3.11/numpy/distutils 2023-09-16T22:46:04,945 copying numpy/distutils/core.py -> build/lib.linux-armv7l-3.11/numpy/distutils 2023-09-16T22:46:04,947 copying numpy/distutils/misc_util.py -> build/lib.linux-armv7l-3.11/numpy/distutils 2023-09-16T22:46:04,950 copying numpy/distutils/ccompiler.py -> build/lib.linux-armv7l-3.11/numpy/distutils 2023-09-16T22:46:04,953 copying numpy/distutils/__init__.py -> build/lib.linux-armv7l-3.11/numpy/distutils 2023-09-16T22:46:04,955 copying numpy/distutils/msvc9compiler.py -> build/lib.linux-armv7l-3.11/numpy/distutils 2023-09-16T22:46:04,957 copying numpy/distutils/setup.py -> build/lib.linux-armv7l-3.11/numpy/distutils 2023-09-16T22:46:04,959 copying numpy/distutils/log.py -> build/lib.linux-armv7l-3.11/numpy/distutils 2023-09-16T22:46:04,961 copying numpy/distutils/intelccompiler.py -> build/lib.linux-armv7l-3.11/numpy/distutils 2023-09-16T22:46:04,963 copying numpy/distutils/conv_template.py -> build/lib.linux-armv7l-3.11/numpy/distutils 2023-09-16T22:46:04,965 copying numpy/distutils/ccompiler_opt.py -> build/lib.linux-armv7l-3.11/numpy/distutils 2023-09-16T22:46:04,969 copying numpy/distutils/from_template.py -> build/lib.linux-armv7l-3.11/numpy/distutils 2023-09-16T22:46:04,971 copying numpy/distutils/system_info.py -> build/lib.linux-armv7l-3.11/numpy/distutils 2023-09-16T22:46:04,977 copying numpy/distutils/extension.py -> build/lib.linux-armv7l-3.11/numpy/distutils 2023-09-16T22:46:04,979 copying numpy/distutils/cpuinfo.py -> build/lib.linux-armv7l-3.11/numpy/distutils 2023-09-16T22:46:04,982 copying numpy/distutils/mingw32ccompiler.py -> build/lib.linux-armv7l-3.11/numpy/distutils 2023-09-16T22:46:04,984 copying numpy/distutils/line_endings.py -> build/lib.linux-armv7l-3.11/numpy/distutils 2023-09-16T22:46:04,986 copying numpy/distutils/npy_pkg_config.py -> build/lib.linux-armv7l-3.11/numpy/distutils 2023-09-16T22:46:04,988 copying numpy/distutils/unixccompiler.py -> build/lib.linux-armv7l-3.11/numpy/distutils 2023-09-16T22:46:04,990 copying numpy/distutils/lib2def.py -> build/lib.linux-armv7l-3.11/numpy/distutils 2023-09-16T22:46:04,992 copying build/src.linux-armv7l-3.11/numpy/distutils/__config__.py -> build/lib.linux-armv7l-3.11/numpy/distutils 2023-09-16T22:46:04,995 creating build/lib.linux-armv7l-3.11/numpy/distutils/command 2023-09-16T22:46:04,996 copying numpy/distutils/command/egg_info.py -> build/lib.linux-armv7l-3.11/numpy/distutils/command 2023-09-16T22:46:04,998 copying numpy/distutils/command/build_src.py -> build/lib.linux-armv7l-3.11/numpy/distutils/command 2023-09-16T22:46:05,001 copying numpy/distutils/command/develop.py -> build/lib.linux-armv7l-3.11/numpy/distutils/command 2023-09-16T22:46:05,003 copying numpy/distutils/command/install_headers.py -> build/lib.linux-armv7l-3.11/numpy/distutils/command 2023-09-16T22:46:05,005 copying numpy/distutils/command/build_py.py -> build/lib.linux-armv7l-3.11/numpy/distutils/command 2023-09-16T22:46:05,006 copying numpy/distutils/command/bdist_rpm.py -> build/lib.linux-armv7l-3.11/numpy/distutils/command 2023-09-16T22:46:05,008 copying numpy/distutils/command/__init__.py -> build/lib.linux-armv7l-3.11/numpy/distutils/command 2023-09-16T22:46:05,010 copying numpy/distutils/command/install.py -> build/lib.linux-armv7l-3.11/numpy/distutils/command 2023-09-16T22:46:05,012 copying numpy/distutils/command/install_data.py -> build/lib.linux-armv7l-3.11/numpy/distutils/command 2023-09-16T22:46:05,014 copying numpy/distutils/command/autodist.py -> build/lib.linux-armv7l-3.11/numpy/distutils/command 2023-09-16T22:46:05,015 copying numpy/distutils/command/sdist.py -> build/lib.linux-armv7l-3.11/numpy/distutils/command 2023-09-16T22:46:05,017 copying numpy/distutils/command/build_scripts.py -> build/lib.linux-armv7l-3.11/numpy/distutils/command 2023-09-16T22:46:05,019 copying numpy/distutils/command/build.py -> build/lib.linux-armv7l-3.11/numpy/distutils/command 2023-09-16T22:46:05,021 copying numpy/distutils/command/config_compiler.py -> build/lib.linux-armv7l-3.11/numpy/distutils/command 2023-09-16T22:46:05,023 copying numpy/distutils/command/build_clib.py -> build/lib.linux-armv7l-3.11/numpy/distutils/command 2023-09-16T22:46:05,025 copying numpy/distutils/command/install_clib.py -> build/lib.linux-armv7l-3.11/numpy/distutils/command 2023-09-16T22:46:05,027 copying numpy/distutils/command/config.py -> build/lib.linux-armv7l-3.11/numpy/distutils/command 2023-09-16T22:46:05,030 copying numpy/distutils/command/build_ext.py -> build/lib.linux-armv7l-3.11/numpy/distutils/command 2023-09-16T22:46:05,033 creating build/lib.linux-armv7l-3.11/numpy/distutils/fcompiler 2023-09-16T22:46:05,034 copying numpy/distutils/fcompiler/g95.py -> build/lib.linux-armv7l-3.11/numpy/distutils/fcompiler 2023-09-16T22:46:05,036 copying numpy/distutils/fcompiler/__init__.py -> build/lib.linux-armv7l-3.11/numpy/distutils/fcompiler 2023-09-16T22:46:05,039 copying numpy/distutils/fcompiler/compaq.py -> build/lib.linux-armv7l-3.11/numpy/distutils/fcompiler 2023-09-16T22:46:05,041 copying numpy/distutils/fcompiler/hpux.py -> build/lib.linux-armv7l-3.11/numpy/distutils/fcompiler 2023-09-16T22:46:05,043 copying numpy/distutils/fcompiler/absoft.py -> build/lib.linux-armv7l-3.11/numpy/distutils/fcompiler 2023-09-16T22:46:05,045 copying numpy/distutils/fcompiler/gnu.py -> build/lib.linux-armv7l-3.11/numpy/distutils/fcompiler 2023-09-16T22:46:05,048 copying numpy/distutils/fcompiler/mips.py -> build/lib.linux-armv7l-3.11/numpy/distutils/fcompiler 2023-09-16T22:46:05,051 copying numpy/distutils/fcompiler/none.py -> build/lib.linux-armv7l-3.11/numpy/distutils/fcompiler 2023-09-16T22:46:05,053 copying numpy/distutils/fcompiler/lahey.py -> build/lib.linux-armv7l-3.11/numpy/distutils/fcompiler 2023-09-16T22:46:05,055 copying numpy/distutils/fcompiler/sun.py -> build/lib.linux-armv7l-3.11/numpy/distutils/fcompiler 2023-09-16T22:46:05,058 copying numpy/distutils/fcompiler/intel.py -> build/lib.linux-armv7l-3.11/numpy/distutils/fcompiler 2023-09-16T22:46:05,060 copying numpy/distutils/fcompiler/nag.py -> build/lib.linux-armv7l-3.11/numpy/distutils/fcompiler 2023-09-16T22:46:05,062 copying numpy/distutils/fcompiler/pathf95.py -> build/lib.linux-armv7l-3.11/numpy/distutils/fcompiler 2023-09-16T22:46:05,064 copying numpy/distutils/fcompiler/fujitsu.py -> build/lib.linux-armv7l-3.11/numpy/distutils/fcompiler 2023-09-16T22:46:05,065 copying numpy/distutils/fcompiler/ibm.py -> build/lib.linux-armv7l-3.11/numpy/distutils/fcompiler 2023-09-16T22:46:05,067 copying numpy/distutils/fcompiler/environment.py -> build/lib.linux-armv7l-3.11/numpy/distutils/fcompiler 2023-09-16T22:46:05,069 copying numpy/distutils/fcompiler/vast.py -> build/lib.linux-armv7l-3.11/numpy/distutils/fcompiler 2023-09-16T22:46:05,071 copying numpy/distutils/fcompiler/pg.py -> build/lib.linux-armv7l-3.11/numpy/distutils/fcompiler 2023-09-16T22:46:05,073 copying numpy/distutils/fcompiler/nv.py -> build/lib.linux-armv7l-3.11/numpy/distutils/fcompiler 2023-09-16T22:46:05,076 creating build/lib.linux-armv7l-3.11/numpy/distutils/tests 2023-09-16T22:46:05,077 copying numpy/distutils/tests/test_fcompiler_gnu.py -> build/lib.linux-armv7l-3.11/numpy/distutils/tests 2023-09-16T22:46:05,079 copying numpy/distutils/tests/test_fcompiler.py -> build/lib.linux-armv7l-3.11/numpy/distutils/tests 2023-09-16T22:46:05,081 copying numpy/distutils/tests/test_system_info.py -> build/lib.linux-armv7l-3.11/numpy/distutils/tests 2023-09-16T22:46:05,084 copying numpy/distutils/tests/test_exec_command.py -> build/lib.linux-armv7l-3.11/numpy/distutils/tests 2023-09-16T22:46:05,086 copying numpy/distutils/tests/test_shell_utils.py -> build/lib.linux-armv7l-3.11/numpy/distutils/tests 2023-09-16T22:46:05,088 copying numpy/distutils/tests/__init__.py -> build/lib.linux-armv7l-3.11/numpy/distutils/tests 2023-09-16T22:46:05,090 copying numpy/distutils/tests/test_fcompiler_nagfor.py -> build/lib.linux-armv7l-3.11/numpy/distutils/tests 2023-09-16T22:46:05,092 copying numpy/distutils/tests/test_mingw32ccompiler.py -> build/lib.linux-armv7l-3.11/numpy/distutils/tests 2023-09-16T22:46:05,094 copying numpy/distutils/tests/test_ccompiler_opt_conf.py -> build/lib.linux-armv7l-3.11/numpy/distutils/tests 2023-09-16T22:46:05,096 copying numpy/distutils/tests/test_misc_util.py -> build/lib.linux-armv7l-3.11/numpy/distutils/tests 2023-09-16T22:46:05,098 copying numpy/distutils/tests/test_npy_pkg_config.py -> build/lib.linux-armv7l-3.11/numpy/distutils/tests 2023-09-16T22:46:05,101 copying numpy/distutils/tests/test_ccompiler_opt.py -> build/lib.linux-armv7l-3.11/numpy/distutils/tests 2023-09-16T22:46:05,104 copying numpy/distutils/tests/test_build_ext.py -> build/lib.linux-armv7l-3.11/numpy/distutils/tests 2023-09-16T22:46:05,106 copying numpy/distutils/tests/test_from_template.py -> build/lib.linux-armv7l-3.11/numpy/distutils/tests 2023-09-16T22:46:05,108 copying numpy/distutils/tests/test_fcompiler_intel.py -> build/lib.linux-armv7l-3.11/numpy/distutils/tests 2023-09-16T22:46:05,111 creating build/lib.linux-armv7l-3.11/numpy/doc 2023-09-16T22:46:05,112 copying numpy/doc/ufuncs.py -> build/lib.linux-armv7l-3.11/numpy/doc 2023-09-16T22:46:05,115 copying numpy/doc/constants.py -> build/lib.linux-armv7l-3.11/numpy/doc 2023-09-16T22:46:05,117 copying numpy/doc/__init__.py -> build/lib.linux-armv7l-3.11/numpy/doc 2023-09-16T22:46:05,120 creating build/lib.linux-armv7l-3.11/numpy/f2py 2023-09-16T22:46:05,121 copying numpy/f2py/__init__.py -> build/lib.linux-armv7l-3.11/numpy/f2py 2023-09-16T22:46:05,123 copying numpy/f2py/cfuncs.py -> build/lib.linux-armv7l-3.11/numpy/f2py 2023-09-16T22:46:05,127 copying numpy/f2py/setup.py -> build/lib.linux-armv7l-3.11/numpy/f2py 2023-09-16T22:46:05,130 copying numpy/f2py/crackfortran.py -> build/lib.linux-armv7l-3.11/numpy/f2py 2023-09-16T22:46:05,137 copying numpy/f2py/__main__.py -> build/lib.linux-armv7l-3.11/numpy/f2py 2023-09-16T22:46:05,139 copying numpy/f2py/rules.py -> build/lib.linux-armv7l-3.11/numpy/f2py 2023-09-16T22:46:05,142 copying numpy/f2py/f2py2e.py -> build/lib.linux-armv7l-3.11/numpy/f2py 2023-09-16T22:46:05,145 copying numpy/f2py/f90mod_rules.py -> build/lib.linux-armv7l-3.11/numpy/f2py 2023-09-16T22:46:05,147 copying numpy/f2py/f2py_testing.py -> build/lib.linux-armv7l-3.11/numpy/f2py 2023-09-16T22:46:05,150 copying numpy/f2py/use_rules.py -> build/lib.linux-armv7l-3.11/numpy/f2py 2023-09-16T22:46:05,152 copying numpy/f2py/common_rules.py -> build/lib.linux-armv7l-3.11/numpy/f2py 2023-09-16T22:46:05,154 copying numpy/f2py/auxfuncs.py -> build/lib.linux-armv7l-3.11/numpy/f2py 2023-09-16T22:46:05,156 copying numpy/f2py/__version__.py -> build/lib.linux-armv7l-3.11/numpy/f2py 2023-09-16T22:46:05,158 copying numpy/f2py/capi_maps.py -> build/lib.linux-armv7l-3.11/numpy/f2py 2023-09-16T22:46:05,161 copying numpy/f2py/diagnose.py -> build/lib.linux-armv7l-3.11/numpy/f2py 2023-09-16T22:46:05,163 copying numpy/f2py/cb_rules.py -> build/lib.linux-armv7l-3.11/numpy/f2py 2023-09-16T22:46:05,166 copying numpy/f2py/func2subr.py -> build/lib.linux-armv7l-3.11/numpy/f2py 2023-09-16T22:46:05,169 creating build/lib.linux-armv7l-3.11/numpy/f2py/tests 2023-09-16T22:46:05,170 copying numpy/f2py/tests/test_regression.py -> build/lib.linux-armv7l-3.11/numpy/f2py/tests 2023-09-16T22:46:05,172 copying numpy/f2py/tests/test_return_logical.py -> build/lib.linux-armv7l-3.11/numpy/f2py/tests 2023-09-16T22:46:05,174 copying numpy/f2py/tests/test_assumed_shape.py -> build/lib.linux-armv7l-3.11/numpy/f2py/tests 2023-09-16T22:46:05,176 copying numpy/f2py/tests/test_module_doc.py -> build/lib.linux-armv7l-3.11/numpy/f2py/tests 2023-09-16T22:46:05,178 copying numpy/f2py/tests/test_crackfortran.py -> build/lib.linux-armv7l-3.11/numpy/f2py/tests 2023-09-16T22:46:05,180 copying numpy/f2py/tests/test_common.py -> build/lib.linux-armv7l-3.11/numpy/f2py/tests 2023-09-16T22:46:05,182 copying numpy/f2py/tests/test_mixed.py -> build/lib.linux-armv7l-3.11/numpy/f2py/tests 2023-09-16T22:46:05,183 copying numpy/f2py/tests/__init__.py -> build/lib.linux-armv7l-3.11/numpy/f2py/tests 2023-09-16T22:46:05,185 copying numpy/f2py/tests/test_semicolon_split.py -> build/lib.linux-armv7l-3.11/numpy/f2py/tests 2023-09-16T22:46:05,186 copying numpy/f2py/tests/test_array_from_pyobj.py -> build/lib.linux-armv7l-3.11/numpy/f2py/tests 2023-09-16T22:46:05,189 copying numpy/f2py/tests/test_return_integer.py -> build/lib.linux-armv7l-3.11/numpy/f2py/tests 2023-09-16T22:46:05,191 copying numpy/f2py/tests/test_quoted_character.py -> build/lib.linux-armv7l-3.11/numpy/f2py/tests 2023-09-16T22:46:05,193 copying numpy/f2py/tests/test_block_docstring.py -> build/lib.linux-armv7l-3.11/numpy/f2py/tests 2023-09-16T22:46:05,196 copying numpy/f2py/tests/util.py -> build/lib.linux-armv7l-3.11/numpy/f2py/tests 2023-09-16T22:46:05,198 copying numpy/f2py/tests/test_kind.py -> build/lib.linux-armv7l-3.11/numpy/f2py/tests 2023-09-16T22:46:05,200 copying numpy/f2py/tests/test_parameter.py -> build/lib.linux-armv7l-3.11/numpy/f2py/tests 2023-09-16T22:46:05,202 copying numpy/f2py/tests/test_callback.py -> build/lib.linux-armv7l-3.11/numpy/f2py/tests 2023-09-16T22:46:05,204 copying numpy/f2py/tests/test_return_real.py -> build/lib.linux-armv7l-3.11/numpy/f2py/tests 2023-09-16T22:46:05,207 copying numpy/f2py/tests/test_return_complex.py -> build/lib.linux-armv7l-3.11/numpy/f2py/tests 2023-09-16T22:46:05,209 copying numpy/f2py/tests/test_string.py -> build/lib.linux-armv7l-3.11/numpy/f2py/tests 2023-09-16T22:46:05,211 copying numpy/f2py/tests/test_compile_function.py -> build/lib.linux-armv7l-3.11/numpy/f2py/tests 2023-09-16T22:46:05,213 copying numpy/f2py/tests/test_size.py -> build/lib.linux-armv7l-3.11/numpy/f2py/tests 2023-09-16T22:46:05,215 copying numpy/f2py/tests/test_return_character.py -> build/lib.linux-armv7l-3.11/numpy/f2py/tests 2023-09-16T22:46:05,217 copying numpy/f2py/tests/test_abstract_interface.py -> build/lib.linux-armv7l-3.11/numpy/f2py/tests 2023-09-16T22:46:05,220 creating build/lib.linux-armv7l-3.11/numpy/fft 2023-09-16T22:46:05,220 copying numpy/fft/__init__.py -> build/lib.linux-armv7l-3.11/numpy/fft 2023-09-16T22:46:05,223 copying numpy/fft/setup.py -> build/lib.linux-armv7l-3.11/numpy/fft 2023-09-16T22:46:05,225 copying numpy/fft/_pocketfft.py -> build/lib.linux-armv7l-3.11/numpy/fft 2023-09-16T22:46:05,229 copying numpy/fft/helper.py -> build/lib.linux-armv7l-3.11/numpy/fft 2023-09-16T22:46:05,231 creating build/lib.linux-armv7l-3.11/numpy/fft/tests 2023-09-16T22:46:05,232 copying numpy/fft/tests/__init__.py -> build/lib.linux-armv7l-3.11/numpy/fft/tests 2023-09-16T22:46:05,234 copying numpy/fft/tests/test_pocketfft.py -> build/lib.linux-armv7l-3.11/numpy/fft/tests 2023-09-16T22:46:05,237 copying numpy/fft/tests/test_helper.py -> build/lib.linux-armv7l-3.11/numpy/fft/tests 2023-09-16T22:46:05,240 creating build/lib.linux-armv7l-3.11/numpy/lib 2023-09-16T22:46:05,242 copying numpy/lib/_version.py -> build/lib.linux-armv7l-3.11/numpy/lib 2023-09-16T22:46:05,244 copying numpy/lib/shape_base.py -> build/lib.linux-armv7l-3.11/numpy/lib 2023-09-16T22:46:05,248 copying numpy/lib/nanfunctions.py -> build/lib.linux-armv7l-3.11/numpy/lib 2023-09-16T22:46:05,251 copying numpy/lib/recfunctions.py -> build/lib.linux-armv7l-3.11/numpy/lib 2023-09-16T22:46:05,255 copying numpy/lib/_iotools.py -> build/lib.linux-armv7l-3.11/numpy/lib 2023-09-16T22:46:05,258 copying numpy/lib/stride_tricks.py -> build/lib.linux-armv7l-3.11/numpy/lib 2023-09-16T22:46:05,261 copying numpy/lib/npyio.py -> build/lib.linux-armv7l-3.11/numpy/lib 2023-09-16T22:46:05,265 copying numpy/lib/__init__.py -> build/lib.linux-armv7l-3.11/numpy/lib 2023-09-16T22:46:05,266 copying numpy/lib/format.py -> build/lib.linux-armv7l-3.11/numpy/lib 2023-09-16T22:46:05,269 copying numpy/lib/arrayterator.py -> build/lib.linux-armv7l-3.11/numpy/lib 2023-09-16T22:46:05,271 copying numpy/lib/polynomial.py -> build/lib.linux-armv7l-3.11/numpy/lib 2023-09-16T22:46:05,274 copying numpy/lib/mixins.py -> build/lib.linux-armv7l-3.11/numpy/lib 2023-09-16T22:46:05,276 copying numpy/lib/_datasource.py -> build/lib.linux-armv7l-3.11/numpy/lib 2023-09-16T22:46:05,279 copying numpy/lib/setup.py -> build/lib.linux-armv7l-3.11/numpy/lib 2023-09-16T22:46:05,280 copying numpy/lib/twodim_base.py -> build/lib.linux-armv7l-3.11/numpy/lib 2023-09-16T22:46:05,284 copying numpy/lib/index_tricks.py -> build/lib.linux-armv7l-3.11/numpy/lib 2023-09-16T22:46:05,286 copying numpy/lib/scimath.py -> build/lib.linux-armv7l-3.11/numpy/lib 2023-09-16T22:46:05,289 copying numpy/lib/user_array.py -> build/lib.linux-armv7l-3.11/numpy/lib 2023-09-16T22:46:05,291 copying numpy/lib/arraypad.py -> build/lib.linux-armv7l-3.11/numpy/lib 2023-09-16T22:46:05,294 copying numpy/lib/type_check.py -> build/lib.linux-armv7l-3.11/numpy/lib 2023-09-16T22:46:05,296 copying numpy/lib/histograms.py -> build/lib.linux-armv7l-3.11/numpy/lib 2023-09-16T22:46:05,299 copying numpy/lib/function_base.py -> build/lib.linux-armv7l-3.11/numpy/lib 2023-09-16T22:46:05,304 copying numpy/lib/utils.py -> build/lib.linux-armv7l-3.11/numpy/lib 2023-09-16T22:46:05,306 copying numpy/lib/ufunclike.py -> build/lib.linux-armv7l-3.11/numpy/lib 2023-09-16T22:46:05,309 copying numpy/lib/arraysetops.py -> build/lib.linux-armv7l-3.11/numpy/lib 2023-09-16T22:46:05,312 creating build/lib.linux-armv7l-3.11/numpy/lib/tests 2023-09-16T22:46:05,313 copying numpy/lib/tests/test_regression.py -> build/lib.linux-armv7l-3.11/numpy/lib/tests 2023-09-16T22:46:05,315 copying numpy/lib/tests/test__iotools.py -> build/lib.linux-armv7l-3.11/numpy/lib/tests 2023-09-16T22:46:05,317 copying numpy/lib/tests/__init__.py -> build/lib.linux-armv7l-3.11/numpy/lib/tests 2023-09-16T22:46:05,319 copying numpy/lib/tests/test_format.py -> build/lib.linux-armv7l-3.11/numpy/lib/tests 2023-09-16T22:46:05,322 copying numpy/lib/tests/test_arrayterator.py -> build/lib.linux-armv7l-3.11/numpy/lib/tests 2023-09-16T22:46:05,323 copying numpy/lib/tests/test_function_base.py -> build/lib.linux-armv7l-3.11/numpy/lib/tests 2023-09-16T22:46:05,330 copying numpy/lib/tests/test_type_check.py -> build/lib.linux-armv7l-3.11/numpy/lib/tests 2023-09-16T22:46:05,332 copying numpy/lib/tests/test_ufunclike.py -> build/lib.linux-armv7l-3.11/numpy/lib/tests 2023-09-16T22:46:05,334 copying numpy/lib/tests/test_shape_base.py -> build/lib.linux-armv7l-3.11/numpy/lib/tests 2023-09-16T22:46:05,336 copying numpy/lib/tests/test_mixins.py -> build/lib.linux-armv7l-3.11/numpy/lib/tests 2023-09-16T22:46:05,338 copying numpy/lib/tests/test_arraypad.py -> build/lib.linux-armv7l-3.11/numpy/lib/tests 2023-09-16T22:46:05,342 copying numpy/lib/tests/test_polynomial.py -> build/lib.linux-armv7l-3.11/numpy/lib/tests 2023-09-16T22:46:05,344 copying numpy/lib/tests/test_stride_tricks.py -> build/lib.linux-armv7l-3.11/numpy/lib/tests 2023-09-16T22:46:05,346 copying numpy/lib/tests/test_arraysetops.py -> build/lib.linux-armv7l-3.11/numpy/lib/tests 2023-09-16T22:46:05,349 copying numpy/lib/tests/test__datasource.py -> build/lib.linux-armv7l-3.11/numpy/lib/tests 2023-09-16T22:46:05,351 copying numpy/lib/tests/test_financial_expired.py -> build/lib.linux-armv7l-3.11/numpy/lib/tests 2023-09-16T22:46:05,353 copying numpy/lib/tests/test_packbits.py -> build/lib.linux-armv7l-3.11/numpy/lib/tests 2023-09-16T22:46:05,356 copying numpy/lib/tests/test_twodim_base.py -> build/lib.linux-armv7l-3.11/numpy/lib/tests 2023-09-16T22:46:05,358 copying numpy/lib/tests/test_recfunctions.py -> build/lib.linux-armv7l-3.11/numpy/lib/tests 2023-09-16T22:46:05,361 copying numpy/lib/tests/test_utils.py -> build/lib.linux-armv7l-3.11/numpy/lib/tests 2023-09-16T22:46:05,363 copying numpy/lib/tests/test_io.py -> build/lib.linux-armv7l-3.11/numpy/lib/tests 2023-09-16T22:46:05,366 copying numpy/lib/tests/test_nanfunctions.py -> build/lib.linux-armv7l-3.11/numpy/lib/tests 2023-09-16T22:46:05,370 copying numpy/lib/tests/test_histograms.py -> build/lib.linux-armv7l-3.11/numpy/lib/tests 2023-09-16T22:46:05,374 copying numpy/lib/tests/test__version.py -> build/lib.linux-armv7l-3.11/numpy/lib/tests 2023-09-16T22:46:05,376 copying numpy/lib/tests/test_index_tricks.py -> build/lib.linux-armv7l-3.11/numpy/lib/tests 2023-09-16T22:46:05,380 creating build/lib.linux-armv7l-3.11/numpy/linalg 2023-09-16T22:46:05,382 copying numpy/linalg/linalg.py -> build/lib.linux-armv7l-3.11/numpy/linalg 2023-09-16T22:46:05,387 copying numpy/linalg/__init__.py -> build/lib.linux-armv7l-3.11/numpy/linalg 2023-09-16T22:46:05,390 copying numpy/linalg/setup.py -> build/lib.linux-armv7l-3.11/numpy/linalg 2023-09-16T22:46:05,393 creating build/lib.linux-armv7l-3.11/numpy/linalg/tests 2023-09-16T22:46:05,394 copying numpy/linalg/tests/test_build.py -> build/lib.linux-armv7l-3.11/numpy/linalg/tests 2023-09-16T22:46:05,397 copying numpy/linalg/tests/test_regression.py -> build/lib.linux-armv7l-3.11/numpy/linalg/tests 2023-09-16T22:46:05,400 copying numpy/linalg/tests/__init__.py -> build/lib.linux-armv7l-3.11/numpy/linalg/tests 2023-09-16T22:46:05,402 copying numpy/linalg/tests/test_linalg.py -> build/lib.linux-armv7l-3.11/numpy/linalg/tests 2023-09-16T22:46:05,407 copying numpy/linalg/tests/test_deprecations.py -> build/lib.linux-armv7l-3.11/numpy/linalg/tests 2023-09-16T22:46:05,410 creating build/lib.linux-armv7l-3.11/numpy/ma 2023-09-16T22:46:05,412 copying numpy/ma/core.py -> build/lib.linux-armv7l-3.11/numpy/ma 2023-09-16T22:46:05,420 copying numpy/ma/__init__.py -> build/lib.linux-armv7l-3.11/numpy/ma 2023-09-16T22:46:05,423 copying numpy/ma/mrecords.py -> build/lib.linux-armv7l-3.11/numpy/ma 2023-09-16T22:46:05,426 copying numpy/ma/testutils.py -> build/lib.linux-armv7l-3.11/numpy/ma 2023-09-16T22:46:05,429 copying numpy/ma/timer_comparison.py -> build/lib.linux-armv7l-3.11/numpy/ma 2023-09-16T22:46:05,432 copying numpy/ma/setup.py -> build/lib.linux-armv7l-3.11/numpy/ma 2023-09-16T22:46:05,435 copying numpy/ma/bench.py -> build/lib.linux-armv7l-3.11/numpy/ma 2023-09-16T22:46:05,437 copying numpy/ma/extras.py -> build/lib.linux-armv7l-3.11/numpy/ma 2023-09-16T22:46:05,442 creating build/lib.linux-armv7l-3.11/numpy/ma/tests 2023-09-16T22:46:05,444 copying numpy/ma/tests/test_regression.py -> build/lib.linux-armv7l-3.11/numpy/ma/tests 2023-09-16T22:46:05,446 copying numpy/ma/tests/test_extras.py -> build/lib.linux-armv7l-3.11/numpy/ma/tests 2023-09-16T22:46:05,451 copying numpy/ma/tests/__init__.py -> build/lib.linux-armv7l-3.11/numpy/ma/tests 2023-09-16T22:46:05,452 copying numpy/ma/tests/test_deprecations.py -> build/lib.linux-armv7l-3.11/numpy/ma/tests 2023-09-16T22:46:05,454 copying numpy/ma/tests/test_subclassing.py -> build/lib.linux-armv7l-3.11/numpy/ma/tests 2023-09-16T22:46:05,456 copying numpy/ma/tests/test_mrecords.py -> build/lib.linux-armv7l-3.11/numpy/ma/tests 2023-09-16T22:46:05,459 copying numpy/ma/tests/test_core.py -> build/lib.linux-armv7l-3.11/numpy/ma/tests 2023-09-16T22:46:05,465 copying numpy/ma/tests/test_old_ma.py -> build/lib.linux-armv7l-3.11/numpy/ma/tests 2023-09-16T22:46:05,468 creating build/lib.linux-armv7l-3.11/numpy/matrixlib 2023-09-16T22:46:05,470 copying numpy/matrixlib/__init__.py -> build/lib.linux-armv7l-3.11/numpy/matrixlib 2023-09-16T22:46:05,471 copying numpy/matrixlib/setup.py -> build/lib.linux-armv7l-3.11/numpy/matrixlib 2023-09-16T22:46:05,473 copying numpy/matrixlib/defmatrix.py -> build/lib.linux-armv7l-3.11/numpy/matrixlib 2023-09-16T22:46:05,476 creating build/lib.linux-armv7l-3.11/numpy/matrixlib/tests 2023-09-16T22:46:05,477 copying numpy/matrixlib/tests/test_regression.py -> build/lib.linux-armv7l-3.11/numpy/matrixlib/tests 2023-09-16T22:46:05,479 copying numpy/matrixlib/tests/test_interaction.py -> build/lib.linux-armv7l-3.11/numpy/matrixlib/tests 2023-09-16T22:46:05,481 copying numpy/matrixlib/tests/test_defmatrix.py -> build/lib.linux-armv7l-3.11/numpy/matrixlib/tests 2023-09-16T22:46:05,483 copying numpy/matrixlib/tests/__init__.py -> build/lib.linux-armv7l-3.11/numpy/matrixlib/tests 2023-09-16T22:46:05,484 copying numpy/matrixlib/tests/test_matrix_linalg.py -> build/lib.linux-armv7l-3.11/numpy/matrixlib/tests 2023-09-16T22:46:05,486 copying numpy/matrixlib/tests/test_masked_matrix.py -> build/lib.linux-armv7l-3.11/numpy/matrixlib/tests 2023-09-16T22:46:05,488 copying numpy/matrixlib/tests/test_multiarray.py -> build/lib.linux-armv7l-3.11/numpy/matrixlib/tests 2023-09-16T22:46:05,490 copying numpy/matrixlib/tests/test_numeric.py -> build/lib.linux-armv7l-3.11/numpy/matrixlib/tests 2023-09-16T22:46:05,492 creating build/lib.linux-armv7l-3.11/numpy/polynomial 2023-09-16T22:46:05,494 copying numpy/polynomial/_polybase.py -> build/lib.linux-armv7l-3.11/numpy/polynomial 2023-09-16T22:46:05,496 copying numpy/polynomial/laguerre.py -> build/lib.linux-armv7l-3.11/numpy/polynomial 2023-09-16T22:46:05,499 copying numpy/polynomial/legendre.py -> build/lib.linux-armv7l-3.11/numpy/polynomial 2023-09-16T22:46:05,501 copying numpy/polynomial/chebyshev.py -> build/lib.linux-armv7l-3.11/numpy/polynomial 2023-09-16T22:46:05,504 copying numpy/polynomial/__init__.py -> build/lib.linux-armv7l-3.11/numpy/polynomial 2023-09-16T22:46:05,506 copying numpy/polynomial/polynomial.py -> build/lib.linux-armv7l-3.11/numpy/polynomial 2023-09-16T22:46:05,509 copying numpy/polynomial/setup.py -> build/lib.linux-armv7l-3.11/numpy/polynomial 2023-09-16T22:46:05,511 copying numpy/polynomial/polyutils.py -> build/lib.linux-armv7l-3.11/numpy/polynomial 2023-09-16T22:46:05,513 copying numpy/polynomial/hermite_e.py -> build/lib.linux-armv7l-3.11/numpy/polynomial 2023-09-16T22:46:05,516 copying numpy/polynomial/hermite.py -> build/lib.linux-armv7l-3.11/numpy/polynomial 2023-09-16T22:46:05,520 creating build/lib.linux-armv7l-3.11/numpy/polynomial/tests 2023-09-16T22:46:05,520 copying numpy/polynomial/tests/__init__.py -> build/lib.linux-armv7l-3.11/numpy/polynomial/tests 2023-09-16T22:46:05,523 copying numpy/polynomial/tests/test_chebyshev.py -> build/lib.linux-armv7l-3.11/numpy/polynomial/tests 2023-09-16T22:46:05,525 copying numpy/polynomial/tests/test_printing.py -> build/lib.linux-armv7l-3.11/numpy/polynomial/tests 2023-09-16T22:46:05,527 copying numpy/polynomial/tests/test_polyutils.py -> build/lib.linux-armv7l-3.11/numpy/polynomial/tests 2023-09-16T22:46:05,529 copying numpy/polynomial/tests/test_legendre.py -> build/lib.linux-armv7l-3.11/numpy/polynomial/tests 2023-09-16T22:46:05,532 copying numpy/polynomial/tests/test_hermite_e.py -> build/lib.linux-armv7l-3.11/numpy/polynomial/tests 2023-09-16T22:46:05,534 copying numpy/polynomial/tests/test_polynomial.py -> build/lib.linux-armv7l-3.11/numpy/polynomial/tests 2023-09-16T22:46:05,536 copying numpy/polynomial/tests/test_laguerre.py -> build/lib.linux-armv7l-3.11/numpy/polynomial/tests 2023-09-16T22:46:05,539 copying numpy/polynomial/tests/test_hermite.py -> build/lib.linux-armv7l-3.11/numpy/polynomial/tests 2023-09-16T22:46:05,542 copying numpy/polynomial/tests/test_classes.py -> build/lib.linux-armv7l-3.11/numpy/polynomial/tests 2023-09-16T22:46:05,544 creating build/lib.linux-armv7l-3.11/numpy/random 2023-09-16T22:46:05,545 copying numpy/random/__init__.py -> build/lib.linux-armv7l-3.11/numpy/random 2023-09-16T22:46:05,547 copying numpy/random/setup.py -> build/lib.linux-armv7l-3.11/numpy/random 2023-09-16T22:46:05,549 copying numpy/random/_pickle.py -> build/lib.linux-armv7l-3.11/numpy/random 2023-09-16T22:46:05,551 creating build/lib.linux-armv7l-3.11/numpy/random/tests 2023-09-16T22:46:05,553 copying numpy/random/tests/test_regression.py -> build/lib.linux-armv7l-3.11/numpy/random/tests 2023-09-16T22:46:05,554 copying numpy/random/tests/test_extending.py -> build/lib.linux-armv7l-3.11/numpy/random/tests 2023-09-16T22:46:05,556 copying numpy/random/tests/test_smoke.py -> build/lib.linux-armv7l-3.11/numpy/random/tests 2023-09-16T22:46:05,559 copying numpy/random/tests/__init__.py -> build/lib.linux-armv7l-3.11/numpy/random/tests 2023-09-16T22:46:05,560 copying numpy/random/tests/test_generator_mt19937_regressions.py -> build/lib.linux-armv7l-3.11/numpy/random/tests 2023-09-16T22:46:05,563 copying numpy/random/tests/test_direct.py -> build/lib.linux-armv7l-3.11/numpy/random/tests 2023-09-16T22:46:05,566 copying numpy/random/tests/test_randomstate_regression.py -> build/lib.linux-armv7l-3.11/numpy/random/tests 2023-09-16T22:46:05,568 copying numpy/random/tests/test_seed_sequence.py -> build/lib.linux-armv7l-3.11/numpy/random/tests 2023-09-16T22:46:05,570 copying numpy/random/tests/test_random.py -> build/lib.linux-armv7l-3.11/numpy/random/tests 2023-09-16T22:46:05,573 copying numpy/random/tests/test_randomstate.py -> build/lib.linux-armv7l-3.11/numpy/random/tests 2023-09-16T22:46:05,577 copying numpy/random/tests/test_generator_mt19937.py -> build/lib.linux-armv7l-3.11/numpy/random/tests 2023-09-16T22:46:05,581 creating build/lib.linux-armv7l-3.11/numpy/testing 2023-09-16T22:46:05,583 copying numpy/testing/__init__.py -> build/lib.linux-armv7l-3.11/numpy/testing 2023-09-16T22:46:05,587 copying numpy/testing/setup.py -> build/lib.linux-armv7l-3.11/numpy/testing 2023-09-16T22:46:05,590 copying numpy/testing/print_coercion_tables.py -> build/lib.linux-armv7l-3.11/numpy/testing 2023-09-16T22:46:05,594 copying numpy/testing/utils.py -> build/lib.linux-armv7l-3.11/numpy/testing 2023-09-16T22:46:05,597 creating build/lib.linux-armv7l-3.11/numpy/testing/_private 2023-09-16T22:46:05,599 copying numpy/testing/_private/__init__.py -> build/lib.linux-armv7l-3.11/numpy/testing/_private 2023-09-16T22:46:05,603 copying numpy/testing/_private/parameterized.py -> build/lib.linux-armv7l-3.11/numpy/testing/_private 2023-09-16T22:46:05,607 copying numpy/testing/_private/nosetester.py -> build/lib.linux-armv7l-3.11/numpy/testing/_private 2023-09-16T22:46:05,611 copying numpy/testing/_private/noseclasses.py -> build/lib.linux-armv7l-3.11/numpy/testing/_private 2023-09-16T22:46:05,615 copying numpy/testing/_private/decorators.py -> build/lib.linux-armv7l-3.11/numpy/testing/_private 2023-09-16T22:46:05,619 copying numpy/testing/_private/utils.py -> build/lib.linux-armv7l-3.11/numpy/testing/_private 2023-09-16T22:46:05,624 creating build/lib.linux-armv7l-3.11/numpy/testing/tests 2023-09-16T22:46:05,625 copying numpy/testing/tests/__init__.py -> build/lib.linux-armv7l-3.11/numpy/testing/tests 2023-09-16T22:46:05,628 copying numpy/testing/tests/test_doctesting.py -> build/lib.linux-armv7l-3.11/numpy/testing/tests 2023-09-16T22:46:05,631 copying numpy/testing/tests/test_utils.py -> build/lib.linux-armv7l-3.11/numpy/testing/tests 2023-09-16T22:46:05,637 creating build/lib.linux-armv7l-3.11/numpy/typing 2023-09-16T22:46:05,638 copying numpy/typing/_char_codes.py -> build/lib.linux-armv7l-3.11/numpy/typing 2023-09-16T22:46:05,642 copying numpy/typing/__init__.py -> build/lib.linux-armv7l-3.11/numpy/typing 2023-09-16T22:46:05,646 copying numpy/typing/_callable.py -> build/lib.linux-armv7l-3.11/numpy/typing 2023-09-16T22:46:05,650 copying numpy/typing/_array_like.py -> build/lib.linux-armv7l-3.11/numpy/typing 2023-09-16T22:46:05,653 copying numpy/typing/setup.py -> build/lib.linux-armv7l-3.11/numpy/typing 2023-09-16T22:46:05,656 copying numpy/typing/mypy_plugin.py -> build/lib.linux-armv7l-3.11/numpy/typing 2023-09-16T22:46:05,660 copying numpy/typing/_add_docstring.py -> build/lib.linux-armv7l-3.11/numpy/typing 2023-09-16T22:46:05,663 copying numpy/typing/_dtype_like.py -> build/lib.linux-armv7l-3.11/numpy/typing 2023-09-16T22:46:05,666 copying numpy/typing/_scalars.py -> build/lib.linux-armv7l-3.11/numpy/typing 2023-09-16T22:46:05,669 copying numpy/typing/_generic_alias.py -> build/lib.linux-armv7l-3.11/numpy/typing 2023-09-16T22:46:05,673 copying numpy/typing/_shape.py -> build/lib.linux-armv7l-3.11/numpy/typing 2023-09-16T22:46:05,676 copying numpy/typing/_nbit.py -> build/lib.linux-armv7l-3.11/numpy/typing 2023-09-16T22:46:05,679 copying numpy/typing/_extended_precision.py -> build/lib.linux-armv7l-3.11/numpy/typing 2023-09-16T22:46:05,682 creating build/lib.linux-armv7l-3.11/numpy/typing/tests 2023-09-16T22:46:05,683 copying numpy/typing/tests/test_generic_alias.py -> build/lib.linux-armv7l-3.11/numpy/typing/tests 2023-09-16T22:46:05,685 copying numpy/typing/tests/__init__.py -> build/lib.linux-armv7l-3.11/numpy/typing/tests 2023-09-16T22:46:05,687 copying numpy/typing/tests/test_typing.py -> build/lib.linux-armv7l-3.11/numpy/typing/tests 2023-09-16T22:46:05,689 copying numpy/typing/tests/test_isfile.py -> build/lib.linux-armv7l-3.11/numpy/typing/tests 2023-09-16T22:46:05,691 creating build/lib.linux-armv7l-3.11/numpy/tests 2023-09-16T22:46:05,692 copying numpy/tests/test_warnings.py -> build/lib.linux-armv7l-3.11/numpy/tests 2023-09-16T22:46:05,695 copying numpy/tests/test_matlib.py -> build/lib.linux-armv7l-3.11/numpy/tests 2023-09-16T22:46:05,697 copying numpy/tests/__init__.py -> build/lib.linux-armv7l-3.11/numpy/tests 2023-09-16T22:46:05,699 copying numpy/tests/test_scripts.py -> build/lib.linux-armv7l-3.11/numpy/tests 2023-09-16T22:46:05,701 copying numpy/tests/test_reloading.py -> build/lib.linux-armv7l-3.11/numpy/tests 2023-09-16T22:46:05,703 copying numpy/tests/test_public_api.py -> build/lib.linux-armv7l-3.11/numpy/tests 2023-09-16T22:46:05,705 copying numpy/tests/test_ctypeslib.py -> build/lib.linux-armv7l-3.11/numpy/tests 2023-09-16T22:46:05,708 copying numpy/tests/test_numpy_version.py -> build/lib.linux-armv7l-3.11/numpy/tests 2023-09-16T22:46:05,735 UPDATING build/lib.linux-armv7l-3.11/numpy/_version.py 2023-09-16T22:46:05,735 set build/lib.linux-armv7l-3.11/numpy/_version.py to '1.21.0' 2023-09-16T22:46:05,736 running build_clib 2023-09-16T22:46:05,737 customize UnixCCompiler 2023-09-16T22:46:05,738 customize UnixCCompiler using new_build_clib 2023-09-16T22:46:05,783 CCompilerOpt.cc_test_flags[1008] : testing flags (-march=native) 2023-09-16T22:46:05,783 C compiler: arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-09-16T22:46:05,785 creating /tmp/tmpqqzu53n4/tmp 2023-09-16T22:46:05,786 creating /tmp/tmpqqzu53n4/tmp/pip-install-r73fx8cu 2023-09-16T22:46:05,786 creating /tmp/tmpqqzu53n4/tmp/pip-install-r73fx8cu/numpy_e419bf8c133249f6ae250a2a3f9de5a2 2023-09-16T22:46:05,787 creating /tmp/tmpqqzu53n4/tmp/pip-install-r73fx8cu/numpy_e419bf8c133249f6ae250a2a3f9de5a2/numpy 2023-09-16T22:46:05,789 creating /tmp/tmpqqzu53n4/tmp/pip-install-r73fx8cu/numpy_e419bf8c133249f6ae250a2a3f9de5a2/numpy/distutils 2023-09-16T22:46:05,789 creating /tmp/tmpqqzu53n4/tmp/pip-install-r73fx8cu/numpy_e419bf8c133249f6ae250a2a3f9de5a2/numpy/distutils/checks 2023-09-16T22:46:05,790 compile options: '-Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/usr/include/python3.11 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/npymath -c' 2023-09-16T22:46:05,791 extra options: '-march=native' 2023-09-16T22:46:05,858 CCompilerOpt.cc_test_flags[1008] : testing flags (-O3) 2023-09-16T22:46:05,858 C compiler: arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-09-16T22:46:05,860 compile options: '-Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/usr/include/python3.11 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/npymath -c' 2023-09-16T22:46:05,861 extra options: '-O3' 2023-09-16T22:46:05,925 CCompilerOpt.cc_test_flags[1008] : testing flags (-Werror) 2023-09-16T22:46:05,926 C compiler: arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-09-16T22:46:05,927 compile options: '-Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/usr/include/python3.11 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/npymath -c' 2023-09-16T22:46:05,928 extra options: '-Werror' 2023-09-16T22:46:05,989 CCompilerOpt.__init__[1696] : check requested baseline 2023-09-16T22:46:05,996 CCompilerOpt.__init__[1705] : check requested dispatch-able features 2023-09-16T22:46:06,005 CCompilerOpt.cc_test_flags[1008] : testing flags (-mfpu=neon) 2023-09-16T22:46:06,006 C compiler: arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-09-16T22:46:06,008 compile options: '-Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/usr/include/python3.11 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/npymath -c' 2023-09-16T22:46:06,008 extra options: '-mfpu=neon' 2023-09-16T22:46:06,071 CCompilerOpt.feature_test[1461] : testing feature 'NEON' with flags (-mfpu=neon) 2023-09-16T22:46:06,072 C compiler: arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-09-16T22:46:06,074 compile options: '-Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/usr/include/python3.11 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/npymath -c' 2023-09-16T22:46:06,074 extra options: '-mfpu=neon -Werror' 2023-09-16T22:46:06,534 CCompilerOpt.cc_test_flags[1008] : testing flags (-mfpu=neon-fp16 -mfp16-format=ieee) 2023-09-16T22:46:06,537 C compiler: arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-09-16T22:46:06,540 compile options: '-Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/usr/include/python3.11 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/npymath -c' 2023-09-16T22:46:06,541 extra options: '-mfpu=neon-fp16 -mfp16-format=ieee' 2023-09-16T22:46:06,604 CCompilerOpt.cc_test_flags[1008] : testing flags (-mfpu=neon-vfpv4) 2023-09-16T22:46:06,605 C compiler: arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-09-16T22:46:06,607 compile options: '-Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/usr/include/python3.11 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/npymath -c' 2023-09-16T22:46:06,607 extra options: '-mfpu=neon-vfpv4' 2023-09-16T22:46:06,672 CCompilerOpt.cc_test_flags[1008] : testing flags (-mfpu=neon-fp-armv8 -march=armv8-a+simd) 2023-09-16T22:46:06,673 C compiler: arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-09-16T22:46:06,676 compile options: '-Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/usr/include/python3.11 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/npymath -c' 2023-09-16T22:46:06,677 extra options: '-mfpu=neon-fp-armv8 -march=armv8-a+simd' 2023-09-16T22:46:06,741 CCompilerOpt.feature_test[1461] : testing feature 'ASIMD' with flags (-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8-a+simd) 2023-09-16T22:46:06,741 C compiler: arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-09-16T22:46:06,743 compile options: '-Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/usr/include/python3.11 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/npymath -c' 2023-09-16T22:46:06,744 extra options: '-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8-a+simd -Werror' 2023-09-16T22:46:07,279 CCompilerOpt.feature_test[1461] : testing feature 'NEON_VFPV4' with flags (-mfp16-format=ieee -mfpu=neon-vfpv4) 2023-09-16T22:46:07,280 C compiler: arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-09-16T22:46:07,281 compile options: '-Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/usr/include/python3.11 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/npymath -c' 2023-09-16T22:46:07,282 extra options: '-mfp16-format=ieee -mfpu=neon-vfpv4 -Werror' 2023-09-16T22:46:07,987 CCompilerOpt.feature_test[1461] : testing feature 'NEON_FP16' with flags (-mfpu=neon-fp16 -mfp16-format=ieee) 2023-09-16T22:46:07,988 C compiler: arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-09-16T22:46:07,990 compile options: '-Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/usr/include/python3.11 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/npymath -c' 2023-09-16T22:46:07,991 extra options: '-mfpu=neon-fp16 -mfp16-format=ieee -Werror' 2023-09-16T22:46:08,488 CCompilerOpt.cc_test_flags[1008] : testing flags (-march=armv8.2-a+dotprod) 2023-09-16T22:46:08,489 C compiler: arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-09-16T22:46:08,491 compile options: '-Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/usr/include/python3.11 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/npymath -c' 2023-09-16T22:46:08,491 extra options: '-march=armv8.2-a+dotprod' 2023-09-16T22:46:08,555 CCompilerOpt.feature_test[1461] : testing feature 'ASIMDDP' with flags (-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+dotprod) 2023-09-16T22:46:08,556 C compiler: arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-09-16T22:46:08,557 compile options: '-Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/usr/include/python3.11 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/npymath -c' 2023-09-16T22:46:08,558 extra options: '-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+dotprod -Werror' 2023-09-16T22:46:09,080 CCompilerOpt.cc_test_flags[1008] : testing flags (-march=armv8.2-a+fp16) 2023-09-16T22:46:09,081 C compiler: arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-09-16T22:46:09,082 compile options: '-Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/usr/include/python3.11 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/npymath -c' 2023-09-16T22:46:09,083 extra options: '-march=armv8.2-a+fp16' 2023-09-16T22:46:09,145 CCompilerOpt.feature_test[1461] : testing feature 'ASIMDHP' with flags (-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+fp16) 2023-09-16T22:46:09,146 C compiler: arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-09-16T22:46:09,148 compile options: '-Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/usr/include/python3.11 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/npymath -c' 2023-09-16T22:46:09,149 extra options: '-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+fp16 -Werror' 2023-09-16T22:46:09,707 CCompilerOpt.cc_test_flags[1008] : testing flags (-march=armv8.2-a+fp16fml) 2023-09-16T22:46:09,708 C compiler: arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-09-16T22:46:09,709 compile options: '-Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/usr/include/python3.11 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/npymath -c' 2023-09-16T22:46:09,710 extra options: '-march=armv8.2-a+fp16fml' 2023-09-16T22:46:09,773 CCompilerOpt.feature_test[1461] : testing feature 'ASIMDFHM' with flags (-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+fp16+fp16fml) 2023-09-16T22:46:09,774 C compiler: arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-09-16T22:46:09,776 compile options: '-Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/usr/include/python3.11 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/npymath -c' 2023-09-16T22:46:09,777 extra options: '-mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+fp16+fp16fml -Werror' 2023-09-16T22:46:10,313 CCompilerOpt.dist_test[576] : CCompilerOpt._dist_test_spawn[711] : Command (arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/usr/include/python3.11 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/npymath -c /tmp/pip-install-r73fx8cu/numpy_e419bf8c133249f6ae250a2a3f9de5a2/numpy/distutils/checks/cpu_asimdfhm.c -o /tmp/tmpqqzu53n4/tmp/pip-install-r73fx8cu/numpy_e419bf8c133249f6ae250a2a3f9de5a2/numpy/distutils/checks/cpu_asimdfhm.o -MMD -MF /tmp/tmpqqzu53n4/tmp/pip-install-r73fx8cu/numpy_e419bf8c133249f6ae250a2a3f9de5a2/numpy/distutils/checks/cpu_asimdfhm.o.d -mfp16-format=ieee -mfpu=neon-fp-armv8 -march=armv8.2-a+fp16+fp16fml -Werror) failed with exit status 1 output -> 2023-09-16T22:46:10,314 /tmp/pip-install-r73fx8cu/numpy_e419bf8c133249f6ae250a2a3f9de5a2/numpy/distutils/checks/cpu_asimdfhm.c: In function ‘main’: 2023-09-16T22:46:10,315 /tmp/pip-install-r73fx8cu/numpy_e419bf8c133249f6ae250a2a3f9de5a2/numpy/distutils/checks/cpu_asimdfhm.c:13:35: error: implicit declaration of function ‘vfmlal_low_u32’; did you mean ‘vfmlal_low_f16’? [-Werror=implicit-function-declaration] 2023-09-16T22:46:10,315 13 | int ret = (int)vget_lane_f32(vfmlal_low_u32(vlf, vlhp, vlhp), 0); 2023-09-16T22:46:10,316 | ^~~~~~~~~~~~~~ 2023-09-16T22:46:10,317 | vfmlal_low_f16 2023-09-16T22:46:10,318 /tmp/pip-install-r73fx8cu/numpy_e419bf8c133249f6ae250a2a3f9de5a2/numpy/distutils/checks/cpu_asimdfhm.c:13:35: error: incompatible type for argument 1 of ‘vget_lane_f32’ 2023-09-16T22:46:10,318 13 | int ret = (int)vget_lane_f32(vfmlal_low_u32(vlf, vlhp, vlhp), 0); 2023-09-16T22:46:10,319 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T22:46:10,320 | | 2023-09-16T22:46:10,320 | int 2023-09-16T22:46:10,321 In file included from /tmp/pip-install-r73fx8cu/numpy_e419bf8c133249f6ae250a2a3f9de5a2/numpy/distutils/checks/cpu_asimdfhm.c:4: 2023-09-16T22:46:10,322 /usr/lib/gcc/arm-linux-gnueabihf/12/include/arm_neon.h:6210:28: note: expected ‘float32x2_t’ but argument is of type ‘int’ 2023-09-16T22:46:10,323 6210 | vget_lane_f32 (float32x2_t __a, const int __b) 2023-09-16T22:46:10,323 | ~~~~~~~~~~~~^~~ 2023-09-16T22:46:10,324 /tmp/pip-install-r73fx8cu/numpy_e419bf8c133249f6ae250a2a3f9de5a2/numpy/distutils/checks/cpu_asimdfhm.c:14:36: error: implicit declaration of function ‘vfmlslq_high_u32’; did you mean ‘vfmlslq_high_f16’? [-Werror=implicit-function-declaration] 2023-09-16T22:46:10,325 14 | ret += (int)vgetq_lane_f32(vfmlslq_high_u32(vf, vhp, vhp), 0); 2023-09-16T22:46:10,326 | ^~~~~~~~~~~~~~~~ 2023-09-16T22:46:10,326 | vfmlslq_high_f16 2023-09-16T22:46:10,327 /tmp/pip-install-r73fx8cu/numpy_e419bf8c133249f6ae250a2a3f9de5a2/numpy/distutils/checks/cpu_asimdfhm.c:14:36: error: incompatible type for argument 1 of ‘vgetq_lane_f32’ 2023-09-16T22:46:10,328 14 | ret += (int)vgetq_lane_f32(vfmlslq_high_u32(vf, vhp, vhp), 0); 2023-09-16T22:46:10,329 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T22:46:10,329 | | 2023-09-16T22:46:10,330 | int 2023-09-16T22:46:10,331 /usr/lib/gcc/arm-linux-gnueabihf/12/include/arm_neon.h:6308:29: note: expected ‘float32x4_t’ but argument is of type ‘int’ 2023-09-16T22:46:10,331 6308 | vgetq_lane_f32 (float32x4_t __a, const int __b) 2023-09-16T22:46:10,332 | ~~~~~~~~~~~~^~~ 2023-09-16T22:46:10,333 cc1: all warnings being treated as errors 2023-09-16T22:46:10,334 CCompilerOpt.feature_test[1477] : testing failed 2023-09-16T22:46:10,341 CCompilerOpt.__init__[1721] : initialize targets groups 2023-09-16T22:46:10,349 CCompilerOpt.__init__[1723] : parse target group simd_test 2023-09-16T22:46:10,356 CCompilerOpt._parse_target_tokens[1934] : skip targets (AVX512F (FMA3 AVX2) VSX VSX3 SSE2 FMA4 XOP VSX2 AVX512_SKX SSE42) not part of baseline or dispatch-able features 2023-09-16T22:46:10,364 CCompilerOpt.generate_dispatch_header[2267] : generate CPU dispatch header: (build/src.linux-armv7l-3.11/numpy/distutils/include/npy_cpu_dispatch_config.h) 2023-09-16T22:46:10,371 CCompilerOpt.generate_dispatch_header[2276] : dispatch header dir build/src.linux-armv7l-3.11/numpy/distutils/include does not exist, creating it 2023-09-16T22:46:10,378 building 'npymath' library 2023-09-16T22:46:10,379 compiling C sources 2023-09-16T22:46:10,379 C compiler: arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-09-16T22:46:10,381 creating build/temp.linux-armv7l-3.11 2023-09-16T22:46:10,381 creating build/temp.linux-armv7l-3.11/numpy 2023-09-16T22:46:10,382 creating build/temp.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:10,383 creating build/temp.linux-armv7l-3.11/numpy/core/src 2023-09-16T22:46:10,383 creating build/temp.linux-armv7l-3.11/numpy/core/src/npymath 2023-09-16T22:46:10,385 creating build/temp.linux-armv7l-3.11/build 2023-09-16T22:46:10,386 creating build/temp.linux-armv7l-3.11/build/src.linux-armv7l-3.11 2023-09-16T22:46:10,386 creating build/temp.linux-armv7l-3.11/build/src.linux-armv7l-3.11/numpy 2023-09-16T22:46:10,387 creating build/temp.linux-armv7l-3.11/build/src.linux-armv7l-3.11/numpy/core 2023-09-16T22:46:10,389 creating build/temp.linux-armv7l-3.11/build/src.linux-armv7l-3.11/numpy/core/src 2023-09-16T22:46:10,390 creating build/temp.linux-armv7l-3.11/build/src.linux-armv7l-3.11/numpy/core/src/npymath 2023-09-16T22:46:10,391 compile options: '-Ibuild/src.linux-armv7l-3.11/numpy/core/src/npymath -Inumpy/core/include -Ibuild/src.linux-armv7l-3.11/numpy/core/include/numpy -Ibuild/src.linux-armv7l-3.11/numpy/distutils/include -Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/usr/include/python3.11 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/npymath -c' 2023-09-16T22:46:10,414 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.11/numpy/core/src/npymath/ieee754.c 2023-09-16T22:46:10,415 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.11/numpy/core/src/npymath/npy_math_complex.c 2023-09-16T22:46:10,416 arm-linux-gnueabihf-gcc: numpy/core/src/npymath/halffloat.c 2023-09-16T22:46:10,420 arm-linux-gnueabihf-gcc: numpy/core/src/npymath/npy_math.c 2023-09-16T22:46:10,969 In file included from numpy/core/src/npymath/npy_math.c:9: 2023-09-16T22:46:10,971 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:46:10,972 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:46:10,973 539 | return modf@c@(x, iptr); 2023-09-16T22:46:10,974 | ^~~~ 2023-09-16T22:46:10,975 | | 2023-09-16T22:46:10,976 | npy_longdouble * {aka double *} 2023-09-16T22:46:10,977 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:46:10,988 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:46:10,989 from numpy/core/src/npymath/npy_math_private.h:21, 2023-09-16T22:46:10,991 from numpy/core/src/npymath/npy_math_internal.h.src:56: 2023-09-16T22:46:10,992 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:46:10,993 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:46:10,994 | ^ 2023-09-16T22:46:12,179 arm-linux-gnueabihf-gcc-ar: adding 4 object files to build/temp.linux-armv7l-3.11/libnpymath.a 2023-09-16T22:46:12,207 building 'npyrandom' library 2023-09-16T22:46:12,208 compiling C sources 2023-09-16T22:46:12,209 C compiler: arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-09-16T22:46:12,211 creating build/temp.linux-armv7l-3.11/numpy/random 2023-09-16T22:46:12,212 creating build/temp.linux-armv7l-3.11/numpy/random/src 2023-09-16T22:46:12,212 creating build/temp.linux-armv7l-3.11/numpy/random/src/distributions 2023-09-16T22:46:12,213 compile options: '-Inumpy/core/include -Ibuild/src.linux-armv7l-3.11/numpy/core/include/numpy -Ibuild/src.linux-armv7l-3.11/numpy/distutils/include -Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/usr/include/python3.11 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/npymath -c' 2023-09-16T22:46:12,216 arm-linux-gnueabihf-gcc: numpy/random/src/distributions/logfactorial.c 2023-09-16T22:46:12,216 arm-linux-gnueabihf-gcc: numpy/random/src/distributions/random_mvhg_marginals.c 2023-09-16T22:46:12,217 arm-linux-gnueabihf-gcc: numpy/random/src/distributions/distributions.c 2023-09-16T22:46:12,225 arm-linux-gnueabihf-gcc: numpy/random/src/distributions/random_mvhg_count.c 2023-09-16T22:46:12,385 arm-linux-gnueabihf-gcc: numpy/random/src/distributions/random_hypergeometric.c 2023-09-16T22:46:14,866 arm-linux-gnueabihf-gcc-ar: adding 5 object files to build/temp.linux-armv7l-3.11/libnpyrandom.a 2023-09-16T22:46:14,888 running build_ext 2023-09-16T22:46:14,889 customize UnixCCompiler 2023-09-16T22:46:14,891 customize UnixCCompiler using new_build_ext 2023-09-16T22:46:14,900 CCompilerOpt.__init__[781] : hit the memory cache 2023-09-16T22:46:14,907 CCompilerOpt.generate_dispatch_header[2267] : generate CPU dispatch header: (build/src.linux-armv7l-3.11/numpy/distutils/include/npy_cpu_dispatch_config.h) 2023-09-16T22:46:14,911 get_default_fcompiler: matching types: '['gnu95', 'intel', 'lahey', 'pg', 'nv', 'absoft', 'nag', 'vast', 'compaq', 'intele', 'intelem', 'gnu', 'g95', 'pathf95', 'nagfor', 'fujitsu']' 2023-09-16T22:46:14,911 customize Gnu95FCompiler 2023-09-16T22:46:14,931 customize Gnu95FCompiler 2023-09-16T22:46:14,950 customize Gnu95FCompiler using new_build_ext 2023-09-16T22:46:14,956 building 'numpy.core._multiarray_tests' extension 2023-09-16T22:46:14,956 compiling C sources 2023-09-16T22:46:14,957 C compiler: arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-09-16T22:46:14,959 creating build/temp.linux-armv7l-3.11/build/src.linux-armv7l-3.11/numpy/core/src/multiarray 2023-09-16T22:46:14,959 creating build/temp.linux-armv7l-3.11/numpy/core/src/common 2023-09-16T22:46:14,960 compile options: '-DNPY_INTERNAL_BUILD=1 -DHAVE_NPY_CONFIG_H=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE=1 -D_LARGEFILE64_SOURCE=1 -Inumpy/core/include -Ibuild/src.linux-armv7l-3.11/numpy/core/include/numpy -Ibuild/src.linux-armv7l-3.11/numpy/distutils/include -Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/usr/include/python3.11 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/npymath -c' 2023-09-16T22:46:14,963 arm-linux-gnueabihf-gcc: numpy/core/src/common/npy_argparse.c 2023-09-16T22:46:14,965 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.11/numpy/core/src/multiarray/_multiarray_tests.c 2023-09-16T22:46:14,965 arm-linux-gnueabihf-gcc: numpy/core/src/common/mem_overlap.c 2023-09-16T22:46:15,486 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:46:15,489 from numpy/core/src/multiarray/_multiarray_tests.c.src:7: 2023-09-16T22:46:15,490 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:46:15,491 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:46:15,492 539 | return modf@c@(x, iptr); 2023-09-16T22:46:15,494 | ^~~~ 2023-09-16T22:46:15,496 | | 2023-09-16T22:46:15,498 | npy_longdouble * {aka double *} 2023-09-16T22:46:15,499 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:46:15,500 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:46:15,502 from numpy/core/src/multiarray/_multiarray_tests.c.src:3: 2023-09-16T22:46:15,503 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:46:15,505 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:46:15,506 | ^ 2023-09-16T22:46:15,610 numpy/core/src/multiarray/_multiarray_tests.c.src: In function ‘array_solve_diophantine’: 2023-09-16T22:46:15,613 numpy/core/src/multiarray/_multiarray_tests.c.src:1353:29: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘unsigned int’ [-Wsign-compare] 2023-09-16T22:46:15,614 1353 | if (PyTuple_GET_SIZE(U) != nterms) { 2023-09-16T22:46:15,615 | ^~ 2023-09-16T22:46:15,654 numpy/core/src/multiarray/_multiarray_tests.c.src: In function ‘PrintFloat_Printf_g’: 2023-09-16T22:46:15,656 numpy/core/src/multiarray/_multiarray_tests.c.src:2096:41: warning: format ‘%Lg’ expects argument of type ‘long double’, but argument 5 has type ‘npy_longdouble’ {aka ‘double’} [-Wformat=] 2023-09-16T22:46:15,657 2096 | PyOS_snprintf(str, sizeof(str), "%.*Lg", precision, x); 2023-09-16T22:46:15,658 | ^~~~~~~ ~ 2023-09-16T22:46:15,659 | | 2023-09-16T22:46:15,660 | npy_longdouble {aka double} 2023-09-16T22:46:19,924 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-3.11/build/src.linux-armv7l-3.11/numpy/core/src/multiarray/_multiarray_tests.o build/temp.linux-armv7l-3.11/numpy/core/src/common/mem_overlap.o build/temp.linux-armv7l-3.11/numpy/core/src/common/npy_argparse.o -L/usr/lib/arm-linux-gnueabihf -Lbuild/temp.linux-armv7l-3.11 -lnpymath -o build/lib.linux-armv7l-3.11/numpy/core/_multiarray_tests.cpython-311-arm-linux-gnueabihf.so 2023-09-16T22:46:20,065 building 'numpy.core._multiarray_umath' extension 2023-09-16T22:46:20,066 compiling C dispatch-able sources 2023-09-16T22:46:20,077 CCompilerOpt.parse_targets[1763] : looking for '@targets' inside -> build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_unary_fp.dispatch.c 2023-09-16T22:46:20,087 CCompilerOpt._parse_target_tokens[1934] : skip targets (SSE2 VSX2) not part of baseline or dispatch-able features 2023-09-16T22:46:20,097 CCompilerOpt._parse_target_tokens[1958] : policy 'MAXOPT' is ON 2023-09-16T22:46:20,107 CCompilerOpt._generate_config[2501] : generate dispatched config -> build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_unary_fp.dispatch.h 2023-09-16T22:46:20,117 CCompilerOpt._wrap_target[2463] : wrap dispatch-able target -> build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_unary_fp.dispatch.neon.c 2023-09-16T22:46:20,127 CCompilerOpt.parse_targets[1763] : looking for '@targets' inside -> build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_arithm_fp.dispatch.c 2023-09-16T22:46:20,137 CCompilerOpt._parse_target_tokens[1934] : skip targets (SSE2 AVX2 AVX512F) not part of baseline or dispatch-able features 2023-09-16T22:46:20,147 CCompilerOpt._parse_target_tokens[1958] : policy 'MAXOPT' is ON 2023-09-16T22:46:20,157 CCompilerOpt._generate_config[2501] : generate dispatched config -> build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_arithm_fp.dispatch.h 2023-09-16T22:46:20,167 CCompilerOpt.parse_targets[1763] : looking for '@targets' inside -> build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_arithmetic.dispatch.c 2023-09-16T22:46:20,177 CCompilerOpt._parse_target_tokens[1934] : skip targets (AVX512F SSE2 SSE41 VSX2 AVX2 AVX512_SKX) not part of baseline or dispatch-able features 2023-09-16T22:46:20,187 CCompilerOpt._parse_target_tokens[1958] : policy 'MAXOPT' is ON 2023-09-16T22:46:20,196 CCompilerOpt._generate_config[2501] : generate dispatched config -> build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_arithmetic.dispatch.h 2023-09-16T22:46:20,207 CCompilerOpt._wrap_target[2463] : wrap dispatch-able target -> build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_arithmetic.dispatch.neon.c 2023-09-16T22:46:20,217 CCompilerOpt.parse_targets[1763] : looking for '@targets' inside -> build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_trigonometric.dispatch.c 2023-09-16T22:46:20,228 CCompilerOpt._parse_target_tokens[1934] : skip targets ((AVX2 FMA3) AVX512F VSX2) not part of baseline or dispatch-able features 2023-09-16T22:46:20,237 CCompilerOpt._parse_target_tokens[1958] : policy 'MAXOPT' is ON 2023-09-16T22:46:20,247 CCompilerOpt._generate_config[2501] : generate dispatched config -> build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_trigonometric.dispatch.h 2023-09-16T22:46:20,258 CCompilerOpt._wrap_target[2463] : wrap dispatch-able target -> build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_trigonometric.dispatch.neon_vfpv4.c 2023-09-16T22:46:20,268 CCompilerOpt.parse_targets[1763] : looking for '@targets' inside -> build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_exponent_log.dispatch.c 2023-09-16T22:46:20,278 CCompilerOpt._parse_target_tokens[1934] : skip targets ((AVX2 FMA3) AVX512F AVX512_SKX) not part of baseline or dispatch-able features 2023-09-16T22:46:20,288 CCompilerOpt._parse_target_tokens[1958] : policy 'MAXOPT' is ON 2023-09-16T22:46:20,297 CCompilerOpt._generate_config[2501] : generate dispatched config -> build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_exponent_log.dispatch.h 2023-09-16T22:46:20,298 C compiler: arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-09-16T22:46:20,299 creating build/temp.linux-armv7l-3.11/build/src.linux-armv7l-3.11/numpy/core/src/umath 2023-09-16T22:46:20,300 compile options: '-DNPY_INTERNAL_BUILD=1 -DHAVE_NPY_CONFIG_H=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE=1 -D_LARGEFILE64_SOURCE=1 -DHAVE_CBLAS -DNO_ATLAS_INFO=-1 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/umath -Inumpy/core/include -Ibuild/src.linux-armv7l-3.11/numpy/core/include/numpy -Ibuild/src.linux-armv7l-3.11/numpy/distutils/include -Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/usr/include/python3.11 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/npymath -c' 2023-09-16T22:46:20,301 extra options: '-O3 -mfpu=neon' 2023-09-16T22:46:20,303 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_unary_fp.dispatch.neon.c 2023-09-16T22:46:20,305 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_arithmetic.dispatch.neon.c 2023-09-16T22:46:21,114 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:46:21,115 from numpy/core/src/umath/loops_unary_fp.dispatch.c.src:12, 2023-09-16T22:46:21,118 from build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_unary_fp.dispatch.neon.c:8: 2023-09-16T22:46:21,125 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:46:21,126 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:46:21,127 539 | return modf@c@(x, iptr); 2023-09-16T22:46:21,128 | ^~~~ 2023-09-16T22:46:21,128 | | 2023-09-16T22:46:21,129 | npy_longdouble * {aka double *} 2023-09-16T22:46:21,130 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:46:21,130 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:46:21,131 from numpy/core/include/numpy/npy_common.h:5, 2023-09-16T22:46:21,132 from numpy/core/include/numpy/npy_math.h:8: 2023-09-16T22:46:21,133 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:46:21,134 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:46:21,134 | ^ 2023-09-16T22:46:21,166 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:46:21,166 from numpy/core/include/numpy/halffloat.h:5, 2023-09-16T22:46:21,167 from numpy/core/src/umath/loops_utils.h.src:5, 2023-09-16T22:46:21,168 from numpy/core/src/umath/loops_arithmetic.dispatch.c.src:12, 2023-09-16T22:46:21,169 from build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_arithmetic.dispatch.neon.c:8: 2023-09-16T22:46:21,170 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:46:21,171 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:46:21,172 539 | return modf@c@(x, iptr); 2023-09-16T22:46:21,173 | ^~~~ 2023-09-16T22:46:21,174 | | 2023-09-16T22:46:21,174 | npy_longdouble * {aka double *} 2023-09-16T22:46:21,175 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:46:21,176 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:46:21,177 from numpy/core/include/numpy/npy_common.h:5, 2023-09-16T22:46:21,178 from numpy/core/src/common/simd/simd.h:10, 2023-09-16T22:46:21,179 from numpy/core/src/umath/loops_arithmetic.dispatch.c.src:11: 2023-09-16T22:46:21,180 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:46:21,181 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:46:21,182 | ^ 2023-09-16T22:46:25,306 C compiler: arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-09-16T22:46:25,308 compile options: '-DNPY_INTERNAL_BUILD=1 -DHAVE_NPY_CONFIG_H=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE=1 -D_LARGEFILE64_SOURCE=1 -DHAVE_CBLAS -DNO_ATLAS_INFO=-1 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/umath -Inumpy/core/include -Ibuild/src.linux-armv7l-3.11/numpy/core/include/numpy -Ibuild/src.linux-armv7l-3.11/numpy/distutils/include -Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/usr/include/python3.11 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/npymath -c' 2023-09-16T22:46:25,309 extra options: '-O3' 2023-09-16T22:46:25,311 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_unary_fp.dispatch.c 2023-09-16T22:46:25,313 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_trigonometric.dispatch.c 2023-09-16T22:46:25,315 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_arithm_fp.dispatch.c 2023-09-16T22:46:25,318 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_arithmetic.dispatch.c 2023-09-16T22:46:25,788 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:46:25,789 from numpy/core/src/umath/loops_trigonometric.dispatch.c.src:7: 2023-09-16T22:46:25,791 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:46:25,792 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:46:25,793 from numpy/core/src/umath/loops_unary_fp.dispatch.c.src:12: 2023-09-16T22:46:25,794 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:46:25,795 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:46:25,796 539 | return modf@c@(x, iptr); 2023-09-16T22:46:25,797 | ^~~~ 2023-09-16T22:46:25,798 | | 2023-09-16T22:46:25,799 | npy_longdouble * {aka double *} 2023-09-16T22:46:25,800 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:46:25,801 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:46:25,802 from numpy/core/include/numpy/npy_common.h:5, 2023-09-16T22:46:25,803 from numpy/core/include/numpy/npy_math.h:8: 2023-09-16T22:46:25,804 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:46:25,806 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:46:25,819 | ^ 2023-09-16T22:46:25,823 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:46:25,828 539 | return modf@c@(x, iptr); 2023-09-16T22:46:25,829 | ^~~~ 2023-09-16T22:46:25,834 | | 2023-09-16T22:46:25,836 | npy_longdouble * {aka double *} 2023-09-16T22:46:25,838 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:46:25,842 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:46:25,844 from numpy/core/include/numpy/npy_common.h:5, 2023-09-16T22:46:25,846 from numpy/core/include/numpy/npy_math.h:8: 2023-09-16T22:46:25,848 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:46:25,852 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:46:25,855 | ^ 2023-09-16T22:46:25,857 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:46:25,859 from numpy/core/include/numpy/halffloat.h:5, 2023-09-16T22:46:25,868 from numpy/core/src/umath/loops_utils.h.src:5, 2023-09-16T22:46:25,870 from numpy/core/src/umath/loops_arithmetic.dispatch.c.src:12: 2023-09-16T22:46:25,872 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:46:25,873 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:46:25,875 539 | return modf@c@(x, iptr); 2023-09-16T22:46:25,877 | ^~~~ 2023-09-16T22:46:25,879 | | 2023-09-16T22:46:25,884 | npy_longdouble * {aka double *} 2023-09-16T22:46:25,886 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:46:25,888 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:46:25,897 from numpy/core/include/numpy/npy_common.h:5, 2023-09-16T22:46:25,899 from numpy/core/src/common/simd/simd.h:10, 2023-09-16T22:46:25,901 from numpy/core/src/umath/loops_arithmetic.dispatch.c.src:11: 2023-09-16T22:46:25,902 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:46:25,904 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:46:25,906 | ^ 2023-09-16T22:46:25,919 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:46:25,921 from numpy/core/include/numpy/halffloat.h:5, 2023-09-16T22:46:25,924 from numpy/core/src/umath/loops_utils.h.src:5, 2023-09-16T22:46:25,928 from numpy/core/src/umath/loops_arithm_fp.dispatch.c.src:10: 2023-09-16T22:46:25,929 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:46:25,931 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:46:25,933 539 | return modf@c@(x, iptr); 2023-09-16T22:46:25,935 | ^~~~ 2023-09-16T22:46:25,936 | | 2023-09-16T22:46:25,938 | npy_longdouble * {aka double *} 2023-09-16T22:46:25,940 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:46:25,941 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:46:25,943 from numpy/core/include/numpy/npy_common.h:5, 2023-09-16T22:46:25,944 from numpy/core/src/common/simd/simd.h:10, 2023-09-16T22:46:25,946 from numpy/core/src/umath/loops_arithm_fp.dispatch.c.src:9: 2023-09-16T22:46:25,948 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:46:25,950 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:46:25,953 | ^ 2023-09-16T22:46:26,062 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_exponent_log.dispatch.c 2023-09-16T22:46:26,584 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:46:26,598 from numpy/core/src/umath/loops_exponent_log.dispatch.c.src:12: 2023-09-16T22:46:26,599 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:46:26,600 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:46:26,601 539 | return modf@c@(x, iptr); 2023-09-16T22:46:26,602 | ^~~~ 2023-09-16T22:46:26,603 | | 2023-09-16T22:46:26,604 | npy_longdouble * {aka double *} 2023-09-16T22:46:26,605 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:46:26,606 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:46:26,607 from numpy/core/include/numpy/npy_common.h:5, 2023-09-16T22:46:26,608 from numpy/core/include/numpy/npy_math.h:8: 2023-09-16T22:46:26,609 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:46:26,610 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:46:26,610 | ^ 2023-09-16T22:46:27,643 C compiler: arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-09-16T22:46:27,644 compile options: '-DNPY_INTERNAL_BUILD=1 -DHAVE_NPY_CONFIG_H=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE=1 -D_LARGEFILE64_SOURCE=1 -DHAVE_CBLAS -DNO_ATLAS_INFO=-1 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/umath -Inumpy/core/include -Ibuild/src.linux-armv7l-3.11/numpy/core/include/numpy -Ibuild/src.linux-armv7l-3.11/numpy/distutils/include -Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/usr/include/python3.11 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/npymath -c' 2023-09-16T22:46:27,645 extra options: '-O3 -mfp16-format=ieee -mfpu=neon-vfpv4' 2023-09-16T22:46:27,647 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_trigonometric.dispatch.neon_vfpv4.c 2023-09-16T22:46:28,435 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:46:28,436 from numpy/core/src/umath/loops_trigonometric.dispatch.c.src:7, 2023-09-16T22:46:28,436 from build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_trigonometric.dispatch.neon_vfpv4.c:10: 2023-09-16T22:46:28,437 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:46:28,438 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:46:28,439 539 | return modf@c@(x, iptr); 2023-09-16T22:46:28,440 | ^~~~ 2023-09-16T22:46:28,441 | | 2023-09-16T22:46:28,441 | npy_longdouble * {aka double *} 2023-09-16T22:46:28,442 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:46:28,443 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:46:28,444 from numpy/core/include/numpy/npy_common.h:5, 2023-09-16T22:46:28,445 from numpy/core/include/numpy/npy_math.h:8: 2023-09-16T22:46:28,446 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:46:28,447 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:46:28,447 | ^ 2023-09-16T22:46:29,389 compiling C sources 2023-09-16T22:46:29,390 C compiler: arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-09-16T22:46:29,392 creating build/temp.linux-armv7l-3.11/numpy/core/src/multiarray 2023-09-16T22:46:29,393 creating build/temp.linux-armv7l-3.11/build/src.linux-armv7l-3.11/numpy/core/src/npysort 2023-09-16T22:46:29,395 creating build/temp.linux-armv7l-3.11/numpy/core/src/umath 2023-09-16T22:46:29,396 creating build/temp.linux-armv7l-3.11/build/src.linux-armv7l-3.11/numpy/core/src/common 2023-09-16T22:46:29,397 compile options: '-DNPY_INTERNAL_BUILD=1 -DHAVE_NPY_CONFIG_H=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE=1 -D_LARGEFILE64_SOURCE=1 -DHAVE_CBLAS -DNO_ATLAS_INFO=-1 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/umath -Inumpy/core/include -Ibuild/src.linux-armv7l-3.11/numpy/core/include/numpy -Ibuild/src.linux-armv7l-3.11/numpy/distutils/include -Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/usr/include/python3.11 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/npymath -c' 2023-09-16T22:46:29,399 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/abstractdtypes.c 2023-09-16T22:46:29,401 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/calculation.c 2023-09-16T22:46:29,403 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/array_method.c 2023-09-16T22:46:29,404 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/convert_datatype.c 2023-09-16T22:46:29,989 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:46:29,990 from numpy/core/src/multiarray/convert_datatype.c:14: 2023-09-16T22:46:29,991 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:46:29,992 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:46:29,994 539 | return modf@c@(x, iptr); 2023-09-16T22:46:29,995 | ^~~~ 2023-09-16T22:46:29,997 | | 2023-09-16T22:46:30,000 | npy_longdouble * {aka double *} 2023-09-16T22:46:30,001 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:46:30,003 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:46:30,006 from numpy/core/src/multiarray/convert_datatype.c:2: 2023-09-16T22:46:30,009 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:46:30,011 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:46:30,014 | ^ 2023-09-16T22:46:30,103 In file included from numpy/core/src/common/npy_cpu_dispatch.h:8, 2023-09-16T22:46:30,104 from numpy/core/src/common/npy_config.h:6, 2023-09-16T22:46:30,105 from numpy/core/include/numpy/npy_common.h:10, 2023-09-16T22:46:30,106 from numpy/core/include/numpy/ndarraytypes.h:4, 2023-09-16T22:46:30,108 from numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-16T22:46:30,109 from numpy/core/include/numpy/arrayobject.h:4, 2023-09-16T22:46:30,110 from numpy/core/src/multiarray/convert_datatype.c:7: 2023-09-16T22:46:30,129 numpy/core/src/multiarray/convert_datatype.c: At top level: 2023-09-16T22:46:30,130 numpy/core/include/numpy/utils.h:27:24: warning: argument 2 of type ‘PyArray_DTypeMeta *[2]’ {aka ‘struct PyArray_DTypeMeta_tag *[2]’} with mismatched bound [-Warray-parameter=] 2023-09-16T22:46:30,132 27 | #define NPY_UNUSED(x) (__NPY_UNUSED_TAGGED ## x) __COMP_NPY_UNUSED 2023-09-16T22:46:30,133 numpy/core/src/multiarray/convert_datatype.c:2256:28: note: in expansion of macro ‘NPY_UNUSED’ 2023-09-16T22:46:30,135 2256 | PyArray_DTypeMeta *NPY_UNUSED(dtypes[2]), 2023-09-16T22:46:30,136 | ^~~~~~~~~~ 2023-09-16T22:46:30,137 In file included from numpy/core/src/multiarray/convert_datatype.c:26: 2023-09-16T22:46:30,139 numpy/core/src/multiarray/convert_datatype.h:77:29: note: previously declared as ‘PyArray_DTypeMeta **’ {aka ‘struct PyArray_DTypeMeta_tag **’} 2023-09-16T22:46:30,140 77 | PyArray_DTypeMeta **dtypes, 2023-09-16T22:46:30,141 | ~~~~~~~~~~~~~~~~~~~~^~~~~~ 2023-09-16T22:46:30,143 numpy/core/src/multiarray/convert_datatype.c:2257:24: warning: argument 3 of type ‘PyArray_Descr *[2]’ {aka ‘struct _PyArray_Descr *[2]’} with mismatched bound [-Warray-parameter=] 2023-09-16T22:46:30,144 2257 | PyArray_Descr *given_descrs[2], 2023-09-16T22:46:30,160 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ 2023-09-16T22:46:30,162 numpy/core/src/multiarray/convert_datatype.h:78:25: note: previously declared as ‘PyArray_Descr **’ {aka ‘struct _PyArray_Descr **’} 2023-09-16T22:46:30,163 78 | PyArray_Descr **given_descrs, 2023-09-16T22:46:30,164 | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T22:46:30,166 numpy/core/src/multiarray/convert_datatype.c:2258:24: warning: argument 4 of type ‘PyArray_Descr *[2]’ {aka ‘struct _PyArray_Descr *[2]’} with mismatched bound [-Warray-parameter=] 2023-09-16T22:46:30,167 2258 | PyArray_Descr *loop_descrs[2]) 2023-09-16T22:46:30,168 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ 2023-09-16T22:46:30,169 numpy/core/src/multiarray/convert_datatype.h:79:25: note: previously declared as ‘PyArray_Descr **’ {aka ‘struct _PyArray_Descr **’} 2023-09-16T22:46:30,171 79 | PyArray_Descr **loop_descrs); 2023-09-16T22:46:30,189 | ~~~~~~~~~~~~~~~~^~~~~~~~~~~ 2023-09-16T22:46:30,190 numpy/core/src/multiarray/convert_datatype.c:2321:28: warning: argument 2 of type ‘PyArray_DTypeMeta *[2]’ {aka ‘struct PyArray_DTypeMeta_tag *[2]’} with mismatched bound [-Warray-parameter=] 2023-09-16T22:46:30,192 2321 | PyArray_DTypeMeta *dtypes[2], 2023-09-16T22:46:30,193 | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~ 2023-09-16T22:46:30,195 numpy/core/src/multiarray/convert_datatype.h:91:29: note: previously declared as ‘PyArray_DTypeMeta **’ {aka ‘struct PyArray_DTypeMeta_tag **’} 2023-09-16T22:46:30,196 91 | PyArray_DTypeMeta **dtypes, 2023-09-16T22:46:30,197 | ~~~~~~~~~~~~~~~~~~~~^~~~~~ 2023-09-16T22:46:30,199 numpy/core/src/multiarray/convert_datatype.c:2322:24: warning: argument 3 of type ‘PyArray_Descr *[2]’ {aka ‘struct _PyArray_Descr *[2]’} with mismatched bound [-Warray-parameter=] 2023-09-16T22:46:30,200 2322 | PyArray_Descr *given_descrs[2], 2023-09-16T22:46:30,202 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ 2023-09-16T22:46:30,203 numpy/core/src/multiarray/convert_datatype.h:92:25: note: previously declared as ‘PyArray_Descr **’ {aka ‘struct _PyArray_Descr **’} 2023-09-16T22:46:30,205 92 | PyArray_Descr **input_descrs, 2023-09-16T22:46:30,206 | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-16T22:46:30,208 numpy/core/src/multiarray/convert_datatype.c:2323:24: warning: argument 4 of type ‘PyArray_Descr *[2]’ {aka ‘struct _PyArray_Descr *[2]’} with mismatched bound [-Warray-parameter=] 2023-09-16T22:46:30,219 2323 | PyArray_Descr *loop_descrs[2]) 2023-09-16T22:46:30,220 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ 2023-09-16T22:46:30,222 numpy/core/src/multiarray/convert_datatype.h:93:25: note: previously declared as ‘PyArray_Descr **’ {aka ‘struct _PyArray_Descr **’} 2023-09-16T22:46:30,223 93 | PyArray_Descr **loop_descrs); 2023-09-16T22:46:30,225 | ~~~~~~~~~~~~~~~~^~~~~~~~~~~ 2023-09-16T22:46:30,417 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/alloc.c 2023-09-16T22:46:30,916 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/array_assign_scalar.c 2023-09-16T22:46:31,132 In function ‘PyDataMem_FREE’, 2023-09-16T22:46:31,133 inlined from ‘PyDataMem_FREE’ at numpy/core/src/multiarray/alloc.c:286:1, 2023-09-16T22:46:31,135 inlined from ‘_npy_free_cache’ at numpy/core/src/multiarray/alloc.c:128:5, 2023-09-16T22:46:31,136 inlined from ‘npy_free_cache’ at numpy/core/src/multiarray/alloc.c:163:5: 2023-09-16T22:46:31,138 numpy/core/src/multiarray/alloc.c:294:14: warning: pointer ‘p’ may be used after ‘free’ [-Wuse-after-free] 2023-09-16T22:46:31,140 294 | (*_PyDataMem_eventhook)(ptr, NULL, 0, 2023-09-16T22:46:31,141 | ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T22:46:31,143 295 | _PyDataMem_eventhook_user_data); 2023-09-16T22:46:31,154 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T22:46:31,156 In function ‘PyDataMem_FREE’, 2023-09-16T22:46:31,157 inlined from ‘_npy_free_cache’ at numpy/core/src/multiarray/alloc.c:128:5, 2023-09-16T22:46:31,159 inlined from ‘npy_free_cache’ at numpy/core/src/multiarray/alloc.c:163:5: 2023-09-16T22:46:31,161 numpy/core/src/multiarray/alloc.c:289:5: note: call to ‘free’ here 2023-09-16T22:46:31,162 289 | free(ptr); 2023-09-16T22:46:31,163 | ^~~~~~~~~ 2023-09-16T22:46:31,332 In function ‘PyDataMem_FREE’, 2023-09-16T22:46:31,334 inlined from ‘PyDataMem_FREE’ at numpy/core/src/multiarray/alloc.c:286:1: 2023-09-16T22:46:31,336 numpy/core/src/multiarray/alloc.c:294:14: warning: pointer ‘ptr’ may be used after ‘free’ [-Wuse-after-free] 2023-09-16T22:46:31,338 294 | (*_PyDataMem_eventhook)(ptr, NULL, 0, 2023-09-16T22:46:31,339 | ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T22:46:31,341 295 | _PyDataMem_eventhook_user_data); 2023-09-16T22:46:31,343 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T22:46:31,344 numpy/core/src/multiarray/alloc.c: In function ‘PyDataMem_FREE’: 2023-09-16T22:46:31,346 numpy/core/src/multiarray/alloc.c:289:5: note: call to ‘free’ here 2023-09-16T22:46:31,347 289 | free(ptr); 2023-09-16T22:46:31,348 | ^~~~~~~~~ 2023-09-16T22:46:31,367 numpy/core/src/multiarray/alloc.c: In function ‘PyDataMem_RENEW’: 2023-09-16T22:46:31,368 numpy/core/src/multiarray/alloc.c:312:9: warning: pointer ‘ptr’ may be used after ‘realloc’ [-Wuse-after-free] 2023-09-16T22:46:31,370 312 | PyTraceMalloc_Untrack(NPY_TRACE_DOMAIN, (npy_uintp)ptr); 2023-09-16T22:46:31,371 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T22:46:31,373 numpy/core/src/multiarray/alloc.c:310:14: note: call to ‘realloc’ here 2023-09-16T22:46:31,374 310 | result = realloc(ptr, size); 2023-09-16T22:46:31,375 | ^~~~~~~~~~~~~~~~~~ 2023-09-16T22:46:31,389 numpy/core/src/multiarray/alloc.c:319:14: warning: pointer ‘ptr’ may be used after ‘realloc’ [-Wuse-after-free] 2023-09-16T22:46:31,391 319 | (*_PyDataMem_eventhook)(ptr, result, size, 2023-09-16T22:46:31,392 | ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T22:46:31,393 320 | _PyDataMem_eventhook_user_data); 2023-09-16T22:46:31,395 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-16T22:46:31,396 numpy/core/src/multiarray/alloc.c:310:14: note: call to ‘realloc’ here 2023-09-16T22:46:31,398 310 | result = realloc(ptr, size); 2023-09-16T22:46:31,399 | ^~~~~~~~~~~~~~~~~~ 2023-09-16T22:46:31,454 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/arrayobject.c 2023-09-16T22:46:31,940 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/compiled_base.c 2023-09-16T22:46:32,093 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/array_assign_array.c 2023-09-16T22:46:32,579 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:46:32,580 from numpy/core/src/multiarray/compiled_base.c:9: 2023-09-16T22:46:32,581 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:46:32,583 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:46:32,584 539 | return modf@c@(x, iptr); 2023-09-16T22:46:32,585 | ^~~~ 2023-09-16T22:46:32,586 | | 2023-09-16T22:46:32,587 | npy_longdouble * {aka double *} 2023-09-16T22:46:32,599 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:46:32,600 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:46:32,602 from numpy/core/src/multiarray/compiled_base.c:2: 2023-09-16T22:46:32,603 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:46:32,605 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:46:32,606 | ^ 2023-09-16T22:46:33,287 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/arrayfunction_override.c 2023-09-16T22:46:33,754 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/conversion_utils.c 2023-09-16T22:46:34,759 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/buffer.c 2023-09-16T22:46:35,512 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/ctors.c 2023-09-16T22:46:36,143 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/common.c 2023-09-16T22:46:36,192 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:46:36,193 from numpy/core/src/multiarray/ctors.c:10: 2023-09-16T22:46:36,194 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:46:36,197 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:46:36,198 539 | return modf@c@(x, iptr); 2023-09-16T22:46:36,199 | ^~~~ 2023-09-16T22:46:36,200 | | 2023-09-16T22:46:36,201 | npy_longdouble * {aka double *} 2023-09-16T22:46:36,210 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:46:36,211 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:46:36,212 from numpy/core/src/multiarray/ctors.c:2: 2023-09-16T22:46:36,213 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:46:36,214 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:46:36,215 | ^ 2023-09-16T22:46:36,283 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.11/numpy/core/src/multiarray/arraytypes.c 2023-09-16T22:46:36,665 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/datetime_busday.c 2023-09-16T22:46:36,927 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:46:36,928 from numpy/core/src/multiarray/arraytypes.c.src:16: 2023-09-16T22:46:36,929 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:46:36,930 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:46:36,931 539 | return modf@c@(x, iptr); 2023-09-16T22:46:36,933 | ^~~~ 2023-09-16T22:46:36,934 | | 2023-09-16T22:46:36,935 | npy_longdouble * {aka double *} 2023-09-16T22:46:36,936 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:46:36,937 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:46:36,949 from numpy/core/src/multiarray/arraytypes.c.src:3: 2023-09-16T22:46:36,950 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:46:36,951 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:46:36,953 | ^ 2023-09-16T22:46:37,044 numpy/core/src/multiarray/arraytypes.c.src: In function ‘get_dummy_stack_array’: 2023-09-16T22:46:37,045 numpy/core/src/multiarray/arraytypes.c.src:65:26: error: lvalue required as left operand of assignment 2023-09-16T22:46:37,047 65 | Py_TYPE(&new_fields) = NULL; 2023-09-16T22:46:37,048 | ^ 2023-09-16T22:46:37,432 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/common_dtype.c 2023-09-16T22:46:37,943 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/dtype_transfer.c 2023-09-16T22:46:38,399 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/convert.c 2023-09-16T22:46:39,059 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/datetime_busdaycal.c 2023-09-16T22:46:39,929 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/hashdescr.c 2023-09-16T22:46:40,294 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/descriptor.c 2023-09-16T22:46:40,854 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/item_selection.c 2023-09-16T22:46:41,533 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:46:41,535 from numpy/core/src/multiarray/item_selection.c:11: 2023-09-16T22:46:41,536 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:46:41,537 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:46:41,539 539 | return modf@c@(x, iptr); 2023-09-16T22:46:41,540 | ^~~~ 2023-09-16T22:46:41,541 | | 2023-09-16T22:46:41,542 | npy_longdouble * {aka double *} 2023-09-16T22:46:41,544 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/datetime.c 2023-09-16T22:46:41,545 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:46:41,546 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:46:41,547 from numpy/core/src/multiarray/item_selection.c:2: 2023-09-16T22:46:41,550 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:46:41,551 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:46:41,552 | ^ 2023-09-16T22:46:43,977 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.11/numpy/core/src/multiarray/einsum.c 2023-09-16T22:46:45,678 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/dtypemeta.c 2023-09-16T22:46:46,344 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.11/numpy/core/src/multiarray/einsum_sumprod.c 2023-09-16T22:46:46,948 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:46:46,950 from numpy/core/include/numpy/halffloat.h:5, 2023-09-16T22:46:46,951 from numpy/core/src/multiarray/einsum_sumprod.c.src:16: 2023-09-16T22:46:46,952 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:46:46,953 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:46:46,955 539 | return modf@c@(x, iptr); 2023-09-16T22:46:46,956 | ^~~~ 2023-09-16T22:46:46,958 | | 2023-09-16T22:46:46,963 | npy_longdouble * {aka double *} 2023-09-16T22:46:46,964 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:46:46,968 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:46:46,969 from numpy/core/include/numpy/npy_common.h:5, 2023-09-16T22:46:46,978 from numpy/core/src/multiarray/einsum_sumprod.c.src:14: 2023-09-16T22:46:46,980 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:46:46,981 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:46:46,982 | ^ 2023-09-16T22:46:47,036 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/dragon4.c 2023-09-16T22:46:47,425 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/datetime_strings.c 2023-09-16T22:46:48,672 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/iterators.c 2023-09-16T22:46:49,842 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/mapping.c 2023-09-16T22:46:50,235 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/nditer_constr.c 2023-09-16T22:46:51,499 numpy/core/src/multiarray/nditer_constr.c: In function ‘npyiter_replace_axisdata’: 2023-09-16T22:46:51,502 numpy/core/src/multiarray/nditer_constr.c:2025:32: warning: writing 4 bytes into a region of size 0 [-Wstringop-overflow=] 2023-09-16T22:46:51,503 2025 | NIT_BASEOFFSETS(iter)[iop] = baseoffset; 2023-09-16T22:46:51,504 In file included from numpy/core/src/multiarray/nditer_constr.c:16: 2023-09-16T22:46:51,506 numpy/core/src/multiarray/nditer_impl.h:149:10: note: at offset [36, 3096] into destination object ‘iter_flexdata’ of size 1 2023-09-16T22:46:51,507 149 | char iter_flexdata; 2023-09-16T22:46:51,508 | ^~~~~~~~~~~~~ 2023-09-16T22:46:52,960 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/legacy_dtype_implementation.c 2023-09-16T22:46:54,123 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.11/numpy/core/src/multiarray/lowlevel_strided_loops.c 2023-09-16T22:46:54,818 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:46:54,819 from numpy/core/include/numpy/halffloat.h:5, 2023-09-16T22:46:54,820 from numpy/core/src/multiarray/lowlevel_strided_loops.c.src:18: 2023-09-16T22:46:54,821 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:46:54,823 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:46:54,825 539 | return modf@c@(x, iptr); 2023-09-16T22:46:54,826 | ^~~~ 2023-09-16T22:46:54,828 | | 2023-09-16T22:46:54,849 | npy_longdouble * {aka double *} 2023-09-16T22:46:54,850 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:46:54,852 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:46:54,853 from numpy/core/src/multiarray/lowlevel_strided_loops.c.src:12: 2023-09-16T22:46:54,854 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:46:54,856 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:46:54,857 | ^ 2023-09-16T22:46:55,110 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/methods.c 2023-09-16T22:46:55,923 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/nditer_pywrap.c 2023-09-16T22:46:59,553 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/number.c 2023-09-16T22:47:00,017 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/multiarraymodule.c 2023-09-16T22:47:00,686 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:47:00,688 from numpy/core/src/multiarray/multiarraymodule.c:28: 2023-09-16T22:47:00,690 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:47:00,693 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:47:00,694 539 | return modf@c@(x, iptr); 2023-09-16T22:47:00,696 | ^~~~ 2023-09-16T22:47:00,697 | | 2023-09-16T22:47:00,699 | npy_longdouble * {aka double *} 2023-09-16T22:47:00,720 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:47:00,721 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:47:00,723 from numpy/core/src/multiarray/multiarraymodule.c:18: 2023-09-16T22:47:00,724 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:47:00,726 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:47:00,728 | ^ 2023-09-16T22:47:02,596 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/flagsobject.c 2023-09-16T22:47:02,729 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/refcount.c 2023-09-16T22:47:04,113 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/sequence.c 2023-09-16T22:47:04,246 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/getset.c 2023-09-16T22:47:04,806 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/shape.c 2023-09-16T22:47:05,458 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:47:05,460 from numpy/core/src/multiarray/shape.c:10: 2023-09-16T22:47:05,461 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:47:05,462 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:47:05,463 539 | return modf@c@(x, iptr); 2023-09-16T22:47:05,465 | ^~~~ 2023-09-16T22:47:05,466 | | 2023-09-16T22:47:05,467 | npy_longdouble * {aka double *} 2023-09-16T22:47:05,478 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:47:05,480 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:47:05,481 from numpy/core/src/multiarray/shape.c:2: 2023-09-16T22:47:05,482 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:47:05,483 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:47:05,484 | ^ 2023-09-16T22:47:06,242 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/typeinfo.c 2023-09-16T22:47:06,963 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/usertypes.c 2023-09-16T22:47:06,977 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/scalarapi.c 2023-09-16T22:47:07,580 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:47:07,581 from numpy/core/src/multiarray/scalarapi.c:10: 2023-09-16T22:47:07,583 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:47:07,584 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:47:07,585 539 | return modf@c@(x, iptr); 2023-09-16T22:47:07,587 | ^~~~ 2023-09-16T22:47:07,588 | | 2023-09-16T22:47:07,599 | npy_longdouble * {aka double *} 2023-09-16T22:47:07,601 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:47:07,602 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:47:07,603 from numpy/core/src/multiarray/scalarapi.c:2: 2023-09-16T22:47:07,605 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:47:07,606 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:47:07,607 | ^ 2023-09-16T22:47:07,668 numpy/core/src/multiarray/scalarapi.c: In function ‘PyArray_Scalar’: 2023-09-16T22:47:07,669 numpy/core/src/multiarray/scalarapi.c:767:13: warning: ‘ob_shash’ is deprecated [-Wdeprecated-declarations] 2023-09-16T22:47:07,670 767 | ((PyBytesObject *)obj)->ob_shash = -1; 2023-09-16T22:47:07,672 | ^ 2023-09-16T22:47:07,675 In file included from /usr/include/python3.11/bytesobject.h:62, 2023-09-16T22:47:07,677 from /usr/include/python3.11/Python.h:50: 2023-09-16T22:47:07,678 /usr/include/python3.11/cpython/bytesobject.h:7:35: note: declared here 2023-09-16T22:47:07,689 7 | Py_DEPRECATED(3.11) Py_hash_t ob_shash; 2023-09-16T22:47:07,690 | ^~~~~~~~ 2023-09-16T22:47:08,056 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/vdot.c 2023-09-16T22:47:08,654 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.11/numpy/core/src/multiarray/scalartypes.c 2023-09-16T22:47:08,892 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.11/numpy/core/src/npysort/quicksort.c 2023-09-16T22:47:09,290 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:47:09,291 from numpy/core/src/multiarray/scalartypes.c.src:12: 2023-09-16T22:47:09,293 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:47:09,294 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:47:09,295 539 | return modf@c@(x, iptr); 2023-09-16T22:47:09,296 | ^~~~ 2023-09-16T22:47:09,297 | | 2023-09-16T22:47:09,309 | npy_longdouble * {aka double *} 2023-09-16T22:47:09,310 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:47:09,311 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:47:09,313 from numpy/core/src/multiarray/scalartypes.c.src:3: 2023-09-16T22:47:09,314 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:47:09,315 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:47:09,316 | ^ 2023-09-16T22:47:16,634 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.11/numpy/core/src/multiarray/nditer_templ.c 2023-09-16T22:47:18,827 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/strfuncs.c 2023-09-16T22:47:19,136 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.11/numpy/core/src/npysort/mergesort.c 2023-09-16T22:47:19,689 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/temp_elide.c 2023-09-16T22:47:20,661 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.11/numpy/core/src/npysort/timsort.c 2023-09-16T22:47:20,981 arm-linux-gnueabihf-gcc: numpy/core/src/multiarray/nditer_api.c 2023-09-16T22:47:24,766 arm-linux-gnueabihf-gcc: numpy/core/src/umath/umathmodule.c 2023-09-16T22:47:25,173 arm-linux-gnueabihf-gcc: numpy/core/src/umath/ufunc_object.c 2023-09-16T22:47:25,415 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:47:25,416 from numpy/core/include/numpy/ufuncobject.h:4, 2023-09-16T22:47:25,418 from numpy/core/src/umath/umathmodule.c:27: 2023-09-16T22:47:25,419 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:47:25,420 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:47:25,421 539 | return modf@c@(x, iptr); 2023-09-16T22:47:25,423 | ^~~~ 2023-09-16T22:47:25,424 | | 2023-09-16T22:47:25,425 | npy_longdouble * {aka double *} 2023-09-16T22:47:25,426 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:47:25,427 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:47:25,439 from numpy/core/src/umath/umathmodule.c:22: 2023-09-16T22:47:25,440 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:47:25,442 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:47:25,443 | ^ 2023-09-16T22:47:25,833 arm-linux-gnueabihf-gcc: numpy/core/src/umath/reduction.c 2023-09-16T22:47:25,843 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:47:25,845 from numpy/core/include/numpy/ufuncobject.h:4, 2023-09-16T22:47:25,846 from numpy/core/src/umath/ufunc_object.c:38: 2023-09-16T22:47:25,847 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:47:25,849 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:47:25,850 539 | return modf@c@(x, iptr); 2023-09-16T22:47:25,852 | ^~~~ 2023-09-16T22:47:25,853 | | 2023-09-16T22:47:25,854 | npy_longdouble * {aka double *} 2023-09-16T22:47:25,856 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:47:25,857 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:47:25,858 from numpy/core/src/umath/ufunc_object.c:30: 2023-09-16T22:47:25,869 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:47:25,870 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:47:25,871 | ^ 2023-09-16T22:47:26,496 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:47:26,497 from numpy/core/include/numpy/ufuncobject.h:4, 2023-09-16T22:47:26,498 from numpy/core/src/umath/reduction.c:22: 2023-09-16T22:47:26,500 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:47:26,501 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:47:26,502 539 | return modf@c@(x, iptr); 2023-09-16T22:47:26,503 | ^~~~ 2023-09-16T22:47:26,504 | | 2023-09-16T22:47:26,506 | npy_longdouble * {aka double *} 2023-09-16T22:47:26,507 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:47:26,518 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:47:26,520 from numpy/core/src/umath/reduction.c:14: 2023-09-16T22:47:26,521 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:47:26,522 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:47:26,523 | ^ 2023-09-16T22:47:26,883 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.11/numpy/core/src/umath/loops.c 2023-09-16T22:47:27,521 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:47:27,522 from numpy/core/include/numpy/ufuncobject.h:4, 2023-09-16T22:47:27,523 from numpy/core/src/umath/loops.c.src:12: 2023-09-16T22:47:27,525 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:47:27,526 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:47:27,527 539 | return modf@c@(x, iptr); 2023-09-16T22:47:27,529 | ^~~~ 2023-09-16T22:47:27,530 | | 2023-09-16T22:47:27,531 | npy_longdouble * {aka double *} 2023-09-16T22:47:27,532 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:47:27,533 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:47:27,535 from numpy/core/src/umath/loops.c.src:7: 2023-09-16T22:47:27,536 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:47:27,537 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:47:27,549 | ^ 2023-09-16T22:47:35,322 arm-linux-gnueabihf-gcc: numpy/core/src/umath/extobj.c 2023-09-16T22:47:36,230 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:47:36,231 from numpy/core/include/numpy/ufuncobject.h:4, 2023-09-16T22:47:36,232 from numpy/core/src/umath/extobj.c:12: 2023-09-16T22:47:36,237 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:47:36,238 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:47:36,239 539 | return modf@c@(x, iptr); 2023-09-16T22:47:36,240 | ^~~~ 2023-09-16T22:47:36,241 | | 2023-09-16T22:47:36,249 | npy_longdouble * {aka double *} 2023-09-16T22:47:36,250 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:47:36,251 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:47:36,252 from numpy/core/src/umath/extobj.c:5: 2023-09-16T22:47:36,254 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:47:36,255 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:47:36,256 | ^ 2023-09-16T22:47:36,723 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.11/numpy/core/src/umath/scalarmath.c 2023-09-16T22:47:37,494 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:47:37,495 from numpy/core/include/numpy/ufuncobject.h:4, 2023-09-16T22:47:37,496 from numpy/core/src/umath/scalarmath.c.src:16: 2023-09-16T22:47:37,498 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:47:37,499 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:47:37,500 539 | return modf@c@(x, iptr); 2023-09-16T22:47:37,502 | ^~~~ 2023-09-16T22:47:37,503 | | 2023-09-16T22:47:37,504 | npy_longdouble * {aka double *} 2023-09-16T22:47:37,505 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:47:37,507 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:47:37,508 from numpy/core/src/umath/scalarmath.c.src:13: 2023-09-16T22:47:37,519 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:47:37,521 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:47:37,522 | ^ 2023-09-16T22:47:45,681 arm-linux-gnueabihf-gcc: numpy/core/src/common/array_assign.c 2023-09-16T22:47:46,539 arm-linux-gnueabihf-gcc: numpy/core/src/common/mem_overlap.c 2023-09-16T22:47:49,698 arm-linux-gnueabihf-gcc: numpy/core/src/common/npy_argparse.c 2023-09-16T22:47:50,004 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.11/numpy/core/src/npysort/heapsort.c 2023-09-16T22:47:50,786 arm-linux-gnueabihf-gcc: numpy/core/src/common/npy_longdouble.c 2023-09-16T22:47:51,360 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:47:51,362 from numpy/core/src/common/npy_longdouble.c:7: 2023-09-16T22:47:51,363 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:47:51,364 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:47:51,366 539 | return modf@c@(x, iptr); 2023-09-16T22:47:51,367 | ^~~~ 2023-09-16T22:47:51,368 | | 2023-09-16T22:47:51,370 | npy_longdouble * {aka double *} 2023-09-16T22:47:51,371 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:47:51,372 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:47:51,373 from numpy/core/src/common/npy_longdouble.c:1: 2023-09-16T22:47:51,374 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:47:51,375 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:47:51,377 | ^ 2023-09-16T22:47:51,645 arm-linux-gnueabihf-gcc: numpy/core/src/common/ucsnarrow.c 2023-09-16T22:47:52,276 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:47:52,277 from numpy/core/src/common/ucsnarrow.c:11: 2023-09-16T22:47:52,278 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:47:52,279 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:47:52,281 539 | return modf@c@(x, iptr); 2023-09-16T22:47:52,282 | ^~~~ 2023-09-16T22:47:52,283 | | 2023-09-16T22:47:52,284 | npy_longdouble * {aka double *} 2023-09-16T22:47:52,285 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:47:52,286 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:47:52,288 from numpy/core/src/common/ucsnarrow.c:4: 2023-09-16T22:47:52,299 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:47:52,300 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:47:52,302 | ^ 2023-09-16T22:47:52,413 arm-linux-gnueabihf-gcc: numpy/core/src/common/ufunc_override.c 2023-09-16T22:47:53,302 arm-linux-gnueabihf-gcc: numpy/core/src/common/numpyos.c 2023-09-16T22:47:53,945 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:47:53,947 from numpy/core/src/common/numpyos.c:10: 2023-09-16T22:47:53,948 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:47:53,949 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:47:53,950 539 | return modf@c@(x, iptr); 2023-09-16T22:47:53,952 | ^~~~ 2023-09-16T22:47:53,953 | | 2023-09-16T22:47:53,954 | npy_longdouble * {aka double *} 2023-09-16T22:47:53,955 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:47:53,957 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:47:53,958 from numpy/core/src/common/numpyos.c:2: 2023-09-16T22:47:53,969 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:47:53,971 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:47:53,972 | ^ 2023-09-16T22:47:54,904 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.11/numpy/core/src/common/npy_cpu_features.c 2023-09-16T22:47:56,424 arm-linux-gnueabihf-gcc: numpy/core/src/common/cblasfuncs.c 2023-09-16T22:47:57,238 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.11/numpy/core/src/npysort/radixsort.c 2023-09-16T22:47:58,282 arm-linux-gnueabihf-gcc: numpy/core/src/common/python_xerbla.c 2023-09-16T22:47:58,414 arm-linux-gnueabihf-gcc: numpy/core/src/umath/ufunc_type_resolution.c 2023-09-16T22:47:59,022 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:47:59,023 from numpy/core/include/numpy/ufuncobject.h:4, 2023-09-16T22:47:59,024 from numpy/core/src/umath/ufunc_type_resolution.c:28: 2023-09-16T22:47:59,025 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:47:59,026 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:47:59,027 539 | return modf@c@(x, iptr); 2023-09-16T22:47:59,028 | ^~~~ 2023-09-16T22:47:59,029 | | 2023-09-16T22:47:59,030 | npy_longdouble * {aka double *} 2023-09-16T22:47:59,031 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:47:59,032 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:47:59,033 from numpy/core/src/umath/ufunc_type_resolution.c:22: 2023-09-16T22:47:59,034 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:47:59,035 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:47:59,036 | ^ 2023-09-16T22:48:00,974 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.11/numpy/core/src/npysort/selection.c 2023-09-16T22:48:01,251 arm-linux-gnueabihf-gcc: numpy/core/src/umath/override.c 2023-09-16T22:48:01,528 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:48:01,529 from numpy/core/src/npysort/selection.c.src:21: 2023-09-16T22:48:01,531 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:48:01,533 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:48:01,535 539 | return modf@c@(x, iptr); 2023-09-16T22:48:01,536 | ^~~~ 2023-09-16T22:48:01,537 | | 2023-09-16T22:48:01,538 | npy_longdouble * {aka double *} 2023-09-16T22:48:01,540 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:48:01,541 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:48:01,543 from numpy/core/src/common/npy_sort.h.src:5, 2023-09-16T22:48:01,544 from numpy/core/src/npysort/selection.c.src:19: 2023-09-16T22:48:01,546 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:48:01,547 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:48:01,549 | ^ 2023-09-16T22:48:01,779 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:48:01,780 from numpy/core/include/numpy/ufuncobject.h:4, 2023-09-16T22:48:01,781 from numpy/core/src/umath/override.c:5: 2023-09-16T22:48:01,783 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:48:01,785 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:48:01,786 539 | return modf@c@(x, iptr); 2023-09-16T22:48:01,787 | ^~~~ 2023-09-16T22:48:01,789 | | 2023-09-16T22:48:01,790 | npy_longdouble * {aka double *} 2023-09-16T22:48:01,791 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:48:01,793 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:48:01,794 from numpy/core/include/numpy/npy_3kcompat.h:13, 2023-09-16T22:48:01,796 from numpy/core/src/common/npy_pycompat.h:4, 2023-09-16T22:48:01,797 from numpy/core/src/umath/override.c:4: 2023-09-16T22:48:01,799 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:48:01,800 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:48:01,801 | ^ 2023-09-16T22:48:16,221 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.11/numpy/core/src/npysort/binsearch.c 2023-09-16T22:48:27,286 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.11/numpy/core/src/umath/matmul.c 2023-09-16T22:48:27,748 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:48:27,749 from numpy/core/include/numpy/ufuncobject.h:4, 2023-09-16T22:48:27,750 from numpy/core/src/umath/matmul.c.src:12: 2023-09-16T22:48:27,751 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:48:27,752 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:48:27,753 539 | return modf@c@(x, iptr); 2023-09-16T22:48:27,754 | ^~~~ 2023-09-16T22:48:27,755 | | 2023-09-16T22:48:27,756 | npy_longdouble * {aka double *} 2023-09-16T22:48:27,757 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:48:27,757 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:48:27,758 from numpy/core/src/umath/matmul.c.src:7: 2023-09-16T22:48:27,760 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:48:27,760 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:48:27,761 | ^ 2023-09-16T22:48:30,572 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.11/numpy/core/src/umath/clip.c 2023-09-16T22:48:30,982 In file included from numpy/core/include/numpy/npy_math.h:585, 2023-09-16T22:48:30,983 from numpy/core/include/numpy/halffloat.h:5, 2023-09-16T22:48:30,984 from numpy/core/src/umath/clip.c.src:10: 2023-09-16T22:48:30,985 numpy/core/src/npymath/npy_math_internal.h.src: In function ‘npy_modfl’: 2023-09-16T22:48:30,987 numpy/core/src/npymath/npy_math_internal.h.src:539:21: warning: passing argument 2 of ‘modfl’ from incompatible pointer type [-Wincompatible-pointer-types] 2023-09-16T22:48:30,988 539 | return modf@c@(x, iptr); 2023-09-16T22:48:30,989 | ^~~~ 2023-09-16T22:48:30,990 | | 2023-09-16T22:48:30,991 | npy_longdouble * {aka double *} 2023-09-16T22:48:30,992 In file included from /usr/include/python3.11/pyport.h:218, 2023-09-16T22:48:30,993 from /usr/include/python3.11/Python.h:38, 2023-09-16T22:48:30,994 from numpy/core/src/umath/clip.c.src:8: 2023-09-16T22:48:30,995 /usr/include/arm-linux-gnueabihf/bits/mathcalls.h:110:1: note: expected ‘long double *’ but argument is of type ‘npy_longdouble *’ {aka ‘double *’} 2023-09-16T22:48:30,996 110 | __MATHCALL (modf,, (_Mdouble_ __x, _Mdouble_ *__iptr)) __nonnull ((2)); 2023-09-16T22:48:30,998 | ^ 2023-09-16T22:48:32,570 error: Command "arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNPY_INTERNAL_BUILD=1 -DHAVE_NPY_CONFIG_H=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE=1 -D_LARGEFILE64_SOURCE=1 -DHAVE_CBLAS -DNO_ATLAS_INFO=-1 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/umath -Inumpy/core/include -Ibuild/src.linux-armv7l-3.11/numpy/core/include/numpy -Ibuild/src.linux-armv7l-3.11/numpy/distutils/include -Inumpy/core/src/common -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/src/_simd -I/usr/include/python3.11 -Ibuild/src.linux-armv7l-3.11/numpy/core/src/common -Ibuild/src.linux-armv7l-3.11/numpy/core/src/npymath -c build/src.linux-armv7l-3.11/numpy/core/src/multiarray/arraytypes.c -o build/temp.linux-armv7l-3.11/build/src.linux-armv7l-3.11/numpy/core/src/multiarray/arraytypes.o -MMD -MF build/temp.linux-armv7l-3.11/build/src.linux-armv7l-3.11/numpy/core/src/multiarray/arraytypes.o.d" failed with exit status 1 2023-09-16T22:48:32,572 ########### EXT COMPILER OPTIMIZATION ########### 2023-09-16T22:48:32,573 Platform : 2023-09-16T22:48:32,574 Architecture: armhf 2023-09-16T22:48:32,576 Compiler : gcc 2023-09-16T22:48:32,577 CPU baseline : 2023-09-16T22:48:32,578 Requested : 'min' 2023-09-16T22:48:32,579 Enabled : none 2023-09-16T22:48:32,580 Flags : none 2023-09-16T22:48:32,580 Extra checks: none 2023-09-16T22:48:32,582 CPU dispatch : 2023-09-16T22:48:32,583 Requested : 'max -xop -fma4' 2023-09-16T22:48:32,584 Enabled : NEON NEON_FP16 NEON_VFPV4 ASIMD ASIMDHP ASIMDDP 2023-09-16T22:48:32,585 Generated : 2023-09-16T22:48:32,585 : 2023-09-16T22:48:32,586 NEON : 2023-09-16T22:48:32,587 Flags : -mfpu=neon 2023-09-16T22:48:32,588 Extra checks: none 2023-09-16T22:48:32,589 Detect : NEON 2023-09-16T22:48:32,589 : build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_unary_fp.dispatch.c 2023-09-16T22:48:32,590 : build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_arithmetic.dispatch.c 2023-09-16T22:48:32,591 : 2023-09-16T22:48:32,592 NEON_VFPV4 : NEON NEON_FP16 2023-09-16T22:48:32,593 Flags : -mfp16-format=ieee -mfpu=neon-vfpv4 2023-09-16T22:48:32,594 Extra checks: none 2023-09-16T22:48:32,595 Detect : NEON NEON_FP16 NEON_VFPV4 2023-09-16T22:48:32,596 : build/src.linux-armv7l-3.11/numpy/core/src/umath/loops_trigonometric.dispatch.c 2023-09-16T22:48:32,597 CCompilerOpt.cache_flush[804] : write cache to path -> /tmp/pip-install-r73fx8cu/numpy_e419bf8c133249f6ae250a2a3f9de5a2/build/temp.linux-armv7l-3.11/ccompiler_opt_cache_ext.py 2023-09-16T22:48:32,599 ########### CLIB COMPILER OPTIMIZATION ########### 2023-09-16T22:48:32,600 Platform : 2023-09-16T22:48:32,601 Architecture: armhf 2023-09-16T22:48:32,602 Compiler : gcc 2023-09-16T22:48:32,605 CPU baseline : 2023-09-16T22:48:32,606 Requested : 'min' 2023-09-16T22:48:32,607 Enabled : none 2023-09-16T22:48:32,608 Flags : none 2023-09-16T22:48:32,609 Extra checks: none 2023-09-16T22:48:32,612 CPU dispatch : 2023-09-16T22:48:32,613 Requested : 'max -xop -fma4' 2023-09-16T22:48:32,614 Enabled : NEON NEON_FP16 NEON_VFPV4 ASIMD ASIMDHP ASIMDDP 2023-09-16T22:48:32,615 Generated : none 2023-09-16T22:48:32,617 CCompilerOpt.cache_flush[804] : write cache to path -> /tmp/pip-install-r73fx8cu/numpy_e419bf8c133249f6ae250a2a3f9de5a2/build/temp.linux-armv7l-3.11/ccompiler_opt_cache_clib.py 2023-09-16T22:48:32,762 error: subprocess-exited-with-error 2023-09-16T22:48:32,763 × Building wheel for numpy (pyproject.toml) did not run successfully. 2023-09-16T22:48:32,764 │ exit code: 1 2023-09-16T22:48:32,764 ╰─> See above for output. 2023-09-16T22:48:32,765 note: This error originates from a subprocess, and is likely not a problem with pip. 2023-09-16T22:48:32,766 full command: /usr/bin/python3 /usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py build_wheel /tmp/tmpr8xbm8dz 2023-09-16T22:48:32,766 cwd: /tmp/pip-install-r73fx8cu/numpy_e419bf8c133249f6ae250a2a3f9de5a2 2023-09-16T22:48:32,767 Building wheel for numpy (pyproject.toml): finished with status 'error' 2023-09-16T22:48:32,768 ERROR: Failed building wheel for numpy 2023-09-16T22:48:32,770 Successfully built biotite 2023-09-16T22:48:32,770 Failed to build numpy 2023-09-16T22:48:32,771 ERROR: Could not build wheels for numpy, which is required to install pyproject.toml-based projects 2023-09-16T22:48:35,208 ERROR: [present-rich] pip subprocess to install build dependencies exited with 1 2023-09-16T22:48:35,222 [bold magenta]full command[/]: [blue]/usr/bin/python3 /usr/local/lib/python3.11/dist-packages/pip/__pip-runner__.py install --ignore-installed --no-user --prefix /tmp/pip-build-env-gnp235lq/overlay --no-warn-script-location -v --no-binary hydride --only-binary :none: -i https://pypi.org/simple --extra-index-url https://www.piwheels.org/simple --prefer-binary -- 'setuptools >= 0.30' 'wheel >= 0.30' 'biotite >= 0.28' 'numpy >= 1.14, <= 1.21' 'msgpack >= 0.5.6' 'cython >= 0.29'[/] 2023-09-16T22:48:35,222 [bold magenta]cwd[/]: \[inherit] 2023-09-16T22:48:35,223 Installing build dependencies: finished with status 'error' 2023-09-16T22:48:35,224 ERROR: [present-rich] pip subprocess to install build dependencies exited with 1 2023-09-16T22:48:35,229 Exception information: 2023-09-16T22:48:35,229 Traceback (most recent call last): 2023-09-16T22:48:35,229 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper 2023-09-16T22:48:35,229 status = run_func(*args) 2023-09-16T22:48:35,229 ^^^^^^^^^^^^^^^ 2023-09-16T22:48:35,229 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper 2023-09-16T22:48:35,229 return func(self, options, args) 2023-09-16T22:48:35,229 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-16T22:48:35,229 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 147, in run 2023-09-16T22:48:35,229 requirement_set = resolver.resolve(reqs, check_supported_wheels=True) 2023-09-16T22:48:35,229 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-16T22:48:35,229 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 92, in resolve 2023-09-16T22:48:35,229 result = self._result = resolver.resolve( 2023-09-16T22:48:35,229 ^^^^^^^^^^^^^^^^^ 2023-09-16T22:48:35,229 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 546, in resolve 2023-09-16T22:48:35,229 state = resolution.resolve(requirements, max_rounds=max_rounds) 2023-09-16T22:48:35,229 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-16T22:48:35,229 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 397, in resolve 2023-09-16T22:48:35,229 self._add_to_criteria(self.state.criteria, r, parent=None) 2023-09-16T22:48:35,229 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria 2023-09-16T22:48:35,229 if not criterion.candidates: 2023-09-16T22:48:35,229 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/structs.py", line 156, in __bool__ 2023-09-16T22:48:35,229 return bool(self._sequence) 2023-09-16T22:48:35,229 ^^^^^^^^^^^^^^^^^^^^ 2023-09-16T22:48:35,229 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__ 2023-09-16T22:48:35,229 return any(self) 2023-09-16T22:48:35,229 ^^^^^^^^^ 2023-09-16T22:48:35,229 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in 2023-09-16T22:48:35,229 return (c for c in iterator if id(c) not in self._incompatible_ids) 2023-09-16T22:48:35,229 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-16T22:48:35,229 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built 2023-09-16T22:48:35,229 candidate = func() 2023-09-16T22:48:35,229 ^^^^^^ 2023-09-16T22:48:35,229 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 206, in _make_candidate_from_link 2023-09-16T22:48:35,229 self._link_candidate_cache[link] = LinkCandidate( 2023-09-16T22:48:35,229 ^^^^^^^^^^^^^^ 2023-09-16T22:48:35,229 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 293, in __init__ 2023-09-16T22:48:35,229 super().__init__( 2023-09-16T22:48:35,229 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 156, in __init__ 2023-09-16T22:48:35,229 self.dist = self._prepare() 2023-09-16T22:48:35,229 ^^^^^^^^^^^^^^^ 2023-09-16T22:48:35,229 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 225, in _prepare 2023-09-16T22:48:35,229 dist = self._prepare_distribution() 2023-09-16T22:48:35,229 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-16T22:48:35,229 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 304, in _prepare_distribution 2023-09-16T22:48:35,229 return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True) 2023-09-16T22:48:35,229 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-16T22:48:35,229 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 538, in prepare_linked_requirement 2023-09-16T22:48:35,229 return self._prepare_linked_requirement(req, parallel_builds) 2023-09-16T22:48:35,229 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-16T22:48:35,229 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 653, in _prepare_linked_requirement 2023-09-16T22:48:35,229 dist = _get_prepared_distribution( 2023-09-16T22:48:35,229 ^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-16T22:48:35,229 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 69, in _get_prepared_distribution 2023-09-16T22:48:35,229 abstract_dist.prepare_distribution_metadata( 2023-09-16T22:48:35,229 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/distributions/sdist.py", line 38, in prepare_distribution_metadata 2023-09-16T22:48:35,229 self._prepare_build_backend(finder) 2023-09-16T22:48:35,229 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/distributions/sdist.py", line 70, in _prepare_build_backend 2023-09-16T22:48:35,229 self.req.build_env.install_requirements( 2023-09-16T22:48:35,229 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/build_env.py", line 217, in install_requirements 2023-09-16T22:48:35,229 self._install_requirements( 2023-09-16T22:48:35,229 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/build_env.py", line 275, in _install_requirements 2023-09-16T22:48:35,229 call_subprocess( 2023-09-16T22:48:35,229 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess 2023-09-16T22:48:35,229 raise error 2023-09-16T22:48:35,229 pip._internal.exceptions.InstallationSubprocessError: pip subprocess to install build dependencies exited with 1 2023-09-16T22:48:35,243 Removed hydride==1.1.1 from https://files.pythonhosted.org/packages/6a/ed/a63ee98669907ef3316d4a39084b2274ebb52ea741fd26d408e1cd5adc08/hydride-1.1.1.tar.gz from build tracker '/tmp/pip-build-tracker-qthh8jlt' 2023-09-16T22:48:35,244 Removed build tracker: '/tmp/pip-build-tracker-qthh8jlt'