2023-09-18T04:23:44,016 Created temporary directory: /tmp/pip-build-tracker-pa3pev3p 2023-09-18T04:23:44,017 Initialized build tracking at /tmp/pip-build-tracker-pa3pev3p 2023-09-18T04:23:44,017 Created build tracker: /tmp/pip-build-tracker-pa3pev3p 2023-09-18T04:23:44,018 Entered build tracker: /tmp/pip-build-tracker-pa3pev3p 2023-09-18T04:23:44,019 Created temporary directory: /tmp/pip-wheel-iif0zgvd 2023-09-18T04:23:44,022 Created temporary directory: /tmp/pip-ephem-wheel-cache-8si3t_wp 2023-09-18T04:23:44,043 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-18T04:23:44,047 2 location(s) to search for versions of ont-remora: 2023-09-18T04:23:44,047 * https://pypi.org/simple/ont-remora/ 2023-09-18T04:23:44,047 * https://www.piwheels.org/simple/ont-remora/ 2023-09-18T04:23:44,048 Fetching project page and analyzing links: https://pypi.org/simple/ont-remora/ 2023-09-18T04:23:44,049 Getting page https://pypi.org/simple/ont-remora/ 2023-09-18T04:23:44,050 Found index url https://pypi.org/simple/ 2023-09-18T04:23:44,267 Fetched page https://pypi.org/simple/ont-remora/ as application/vnd.pypi.simple.v1+json 2023-09-18T04:23:44,272 Found link https://files.pythonhosted.org/packages/08/9a/48be7e9b8c0fca1b5cd054a31c0eac96a3eb23ba2404427fbe57a8e8ac1c/ont-remora-0.1.0.tar.gz (from https://pypi.org/simple/ont-remora/), version: 0.1.0 2023-09-18T04:23:44,273 Skipping link: No binaries permitted for ont-remora: https://files.pythonhosted.org/packages/3e/51/958811b63a9e5d6d024e43c0e8ba077ccbb124797715a951457b2f1fe63c/ont_remora-0.1.0-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/ont-remora/) 2023-09-18T04:23:44,273 Found link https://files.pythonhosted.org/packages/b4/d2/ccfbaac503e95e50ac8c2535a00df4dd4428e55e331c1ccccd6f41825dc6/ont-remora-0.1.1.tar.gz (from https://pypi.org/simple/ont-remora/), version: 0.1.1 2023-09-18T04:23:44,274 Skipping link: No binaries permitted for ont-remora: https://files.pythonhosted.org/packages/78/89/f7f61a19efd7f11ef545de8b5cd8d833a988a14196fdae1b180cb09d70e4/ont_remora-0.1.1-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/ont-remora/) 2023-09-18T04:23:44,275 Found link https://files.pythonhosted.org/packages/64/cb/57a204d5c4481c34445b2cbaf48713865993edef5d763a0e65ef1b2da3f5/ont-remora-0.1.2.tar.gz (from https://pypi.org/simple/ont-remora/), version: 0.1.2 2023-09-18T04:23:44,275 Skipping link: No binaries permitted for ont-remora: https://files.pythonhosted.org/packages/f2/91/4eb0556c6603cec4b53fcf166ea0e83628e5e0c936b0685a2974d0163647/ont_remora-0.1.2-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/ont-remora/) 2023-09-18T04:23:44,276 Found link https://files.pythonhosted.org/packages/ed/c5/af385827a8cfdd136a26449d838a146d598448df23d5899d3baa2d623194/ont-remora-1.0.0.tar.gz (from https://pypi.org/simple/ont-remora/), version: 1.0.0 2023-09-18T04:23:44,277 Skipping link: No binaries permitted for ont-remora: https://files.pythonhosted.org/packages/c1/5b/c0631f3e4e79d9bd649475c19c540b269cec977ca4a15c55926247af6419/ont_remora-1.0.0-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/ont-remora/) 2023-09-18T04:23:44,277 Found link https://files.pythonhosted.org/packages/a6/05/f5d9b0890f6b7c3be170731d6207165c67eac5b02cde5cad604ee484b571/ont-remora-1.1.0.tar.gz (from https://pypi.org/simple/ont-remora/), version: 1.1.0 2023-09-18T04:23:44,278 Skipping link: No binaries permitted for ont-remora: https://files.pythonhosted.org/packages/13/3a/dbb40cfe1335023280b82c71de456ac34bbdf3538649019e7ddd04eae0e9/ont_remora-1.1.0-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/ont-remora/) 2023-09-18T04:23:44,279 Found link https://files.pythonhosted.org/packages/c9/04/71e201ef20f2a263d880072e5d6e29dd1573df3ea9afada6a63d3b209006/ont-remora-1.1.1.tar.gz (from https://pypi.org/simple/ont-remora/), version: 1.1.1 2023-09-18T04:23:44,279 Skipping link: No binaries permitted for ont-remora: https://files.pythonhosted.org/packages/35/6a/0a789d6c9f1d79c749964749261f710fa250c9593e27b0c1e25161eb40ab/ont_remora-1.1.1-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/ont-remora/) 2023-09-18T04:23:44,280 Found link https://files.pythonhosted.org/packages/9d/bb/16ad3582f73eca22c5f893270d968659ff29dd740ef7301552b77c6586de/ont-remora-2.0.0.tar.gz (from https://pypi.org/simple/ont-remora/), version: 2.0.0 2023-09-18T04:23:44,281 Skipping link: No binaries permitted for ont-remora: https://files.pythonhosted.org/packages/f0/7a/84044200789a95965846ee92cd20fe366b5632e07f19610d7f876e8ee26a/ont_remora-2.0.0-cp38-cp38-macosx_12_0_arm64.whl (from https://pypi.org/simple/ont-remora/) 2023-09-18T04:23:44,281 Found link https://files.pythonhosted.org/packages/85/5a/eed0190211909587fd0df338e4560ff47d4be162bbb2db6aced92995748e/ont-remora-2.1.0.tar.gz (from https://pypi.org/simple/ont-remora/), version: 2.1.0 2023-09-18T04:23:44,282 Skipping link: No binaries permitted for ont-remora: https://files.pythonhosted.org/packages/b3/88/61686bb2f9c661cd33fcfd97a8816c7de1c25bde6d64439bfafd63b049a7/ont_remora-2.1.0-cp38-cp38-macosx_12_0_arm64.whl (from https://pypi.org/simple/ont-remora/) 2023-09-18T04:23:44,282 Found link https://files.pythonhosted.org/packages/f2/56/10658a4b454f6f546246a8a86a3eec1ea260af5c96353f7db022a0636ba4/ont-remora-2.1.1.tar.gz (from https://pypi.org/simple/ont-remora/), version: 2.1.1 2023-09-18T04:23:44,283 Skipping link: No binaries permitted for ont-remora: https://files.pythonhosted.org/packages/1c/c0/6c6f734a09b03762dedbdcca8bd72eeb30673078c24da6fcc10d8ecc84b2/ont_remora-2.1.1-cp38-cp38-macosx_12_0_arm64.whl (from https://pypi.org/simple/ont-remora/) 2023-09-18T04:23:44,284 Found link https://files.pythonhosted.org/packages/22/ff/ebe7bb2ced58388524150872a2c8229fcce8d4dff2778f18e0bf999224c4/ont-remora-2.1.2.tar.gz (from https://pypi.org/simple/ont-remora/), version: 2.1.2 2023-09-18T04:23:44,284 Skipping link: No binaries permitted for ont-remora: https://files.pythonhosted.org/packages/c0/65/6f007d88ec60515a649ded5d1af710893c3b665d895850a771afdd3f31dd/ont_remora-2.1.2-cp38-cp38-macosx_12_0_arm64.whl (from https://pypi.org/simple/ont-remora/) 2023-09-18T04:23:44,285 Found link https://files.pythonhosted.org/packages/90/58/f8e0f9f00580340f06c0944d00419e80c98ae6e71e6180b9b0d7bb1aa292/ont-remora-2.1.3.tar.gz (from https://pypi.org/simple/ont-remora/), version: 2.1.3 2023-09-18T04:23:44,285 Skipping link: No binaries permitted for ont-remora: https://files.pythonhosted.org/packages/5d/cb/21b368d1d06b445e3e3cf4cf9d7eb75b803767eda5dcc2129444cf1881f5/ont_remora-2.1.3-cp38-cp38-macosx_12_0_arm64.whl (from https://pypi.org/simple/ont-remora/) 2023-09-18T04:23:44,286 Fetching project page and analyzing links: https://www.piwheels.org/simple/ont-remora/ 2023-09-18T04:23:44,287 Getting page https://www.piwheels.org/simple/ont-remora/ 2023-09-18T04:23:44,288 Found index url https://www.piwheels.org/simple/ 2023-09-18T04:23:44,559 Fetched page https://www.piwheels.org/simple/ont-remora/ as text/html 2023-09-18T04:23:44,575 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-2.1.3-cp39-cp39-linux_armv7l.whl#sha256=0d168844b897c877b1994559d295d240856e9a8e1d76186d41cc6a83a09da993 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,576 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-2.1.3-cp39-cp39-linux_armv6l.whl#sha256=0d168844b897c877b1994559d295d240856e9a8e1d76186d41cc6a83a09da993 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,577 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-2.1.3-cp37-cp37m-linux_armv7l.whl#sha256=5d9bac0f7a28d859d9112994d3b0d2a950bacc12d6838f3808b2337704c5407d (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,577 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-2.1.3-cp37-cp37m-linux_armv6l.whl#sha256=5d9bac0f7a28d859d9112994d3b0d2a950bacc12d6838f3808b2337704c5407d (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,578 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-2.1.2-cp39-cp39-linux_armv7l.whl#sha256=5a22e9ab1094e58c906ce5048a207b3eb09d21567946136f341ce3e7720772e3 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,579 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-2.1.2-cp39-cp39-linux_armv6l.whl#sha256=5a22e9ab1094e58c906ce5048a207b3eb09d21567946136f341ce3e7720772e3 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,579 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-2.1.2-cp37-cp37m-linux_armv7l.whl#sha256=f7c2bb2f655d71dcf0f31ef328ae760d459a5e169bf49a6f96c56781e1d6ddb1 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,580 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-2.1.2-cp37-cp37m-linux_armv6l.whl#sha256=f7c2bb2f655d71dcf0f31ef328ae760d459a5e169bf49a6f96c56781e1d6ddb1 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,580 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-2.1.1-cp39-cp39-linux_armv7l.whl#sha256=d44a518031eb98f6ef81e0e172d45b59ff041258acc0d61380218e5ff0daec48 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,581 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-2.1.1-cp39-cp39-linux_armv6l.whl#sha256=d44a518031eb98f6ef81e0e172d45b59ff041258acc0d61380218e5ff0daec48 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,581 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-2.1.1-cp37-cp37m-linux_armv7l.whl#sha256=a9abde6adfd90ef7b51d241d11304d1f74cc2a76603eec6103a60fa35ba0ce77 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,582 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-2.1.1-cp37-cp37m-linux_armv6l.whl#sha256=a9abde6adfd90ef7b51d241d11304d1f74cc2a76603eec6103a60fa35ba0ce77 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,582 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-2.1.0-cp39-cp39-linux_armv7l.whl#sha256=b996ef9ac74b7d5f14b40ad5ea89c8a9960ab3a53ab1fb0da4b44f4137395059 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,583 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-2.1.0-cp39-cp39-linux_armv6l.whl#sha256=b996ef9ac74b7d5f14b40ad5ea89c8a9960ab3a53ab1fb0da4b44f4137395059 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,584 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-2.1.0-cp37-cp37m-linux_armv7l.whl#sha256=e18c7bce9b38abb70885e8ea56af77976ee3f93860029b229c2ae801162d9a92 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,584 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-2.1.0-cp37-cp37m-linux_armv6l.whl#sha256=e18c7bce9b38abb70885e8ea56af77976ee3f93860029b229c2ae801162d9a92 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,585 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-2.0.0-cp39-cp39-linux_armv7l.whl#sha256=bf2fdabc51638fed4d5e72e83bb142200a9fefcd6435b959d75e31430e090845 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,585 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-2.0.0-cp39-cp39-linux_armv6l.whl#sha256=bf2fdabc51638fed4d5e72e83bb142200a9fefcd6435b959d75e31430e090845 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,586 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-2.0.0-cp37-cp37m-linux_armv7l.whl#sha256=459ab610f4dd0ac2c3530588ea1e45c72aba3c69f6fa07afcde96ebf1c09f33d (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,587 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-2.0.0-cp37-cp37m-linux_armv6l.whl#sha256=459ab610f4dd0ac2c3530588ea1e45c72aba3c69f6fa07afcde96ebf1c09f33d (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,587 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-1.1.1-cp39-cp39-linux_armv7l.whl#sha256=102e646afadadd586713276c83b806754b9711e3f1f3a572740a9389f8855814 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,588 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-1.1.1-cp39-cp39-linux_armv6l.whl#sha256=102e646afadadd586713276c83b806754b9711e3f1f3a572740a9389f8855814 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,588 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-1.1.1-cp37-cp37m-linux_armv7l.whl#sha256=6caf91032277e80704e028d506a8e509429d478e45ff0c65abcdf1b2bbe90b5a (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,589 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-1.1.1-cp37-cp37m-linux_armv6l.whl#sha256=6caf91032277e80704e028d506a8e509429d478e45ff0c65abcdf1b2bbe90b5a (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,589 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-1.1.1-cp35-cp35m-linux_armv7l.whl#sha256=e4d203a1764cc26f144d6375665ae018889bd45e05afcb03342c0c2efe045778 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,590 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-1.1.1-cp35-cp35m-linux_armv6l.whl#sha256=e4d203a1764cc26f144d6375665ae018889bd45e05afcb03342c0c2efe045778 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,591 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-1.1.0-cp39-cp39-linux_armv7l.whl#sha256=df4709c4b038156a799e9d7549fefb8f6b858cd7879544b8baf9110ec5f0a3f2 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,591 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-1.1.0-cp39-cp39-linux_armv6l.whl#sha256=df4709c4b038156a799e9d7549fefb8f6b858cd7879544b8baf9110ec5f0a3f2 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,592 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-1.1.0-cp37-cp37m-linux_armv7l.whl#sha256=5854322e430ad7423df6a4f6c9f3076148e8301bbf2fda3fec618c2b71ac24e0 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,593 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-1.1.0-cp37-cp37m-linux_armv6l.whl#sha256=5854322e430ad7423df6a4f6c9f3076148e8301bbf2fda3fec618c2b71ac24e0 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,593 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-1.1.0-cp35-cp35m-linux_armv7l.whl#sha256=3bc66c78881a4154d26778f6e970c71019565ad60fa1bfcac520d09bfc6756ca (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,594 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-1.1.0-cp35-cp35m-linux_armv6l.whl#sha256=3bc66c78881a4154d26778f6e970c71019565ad60fa1bfcac520d09bfc6756ca (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,594 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-1.0.0-cp39-cp39-linux_armv7l.whl#sha256=fd8db21cee5bc2feb25360fdd14b561fe2278cd2f7ebdac6cbb563167be6b4a4 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,595 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-1.0.0-cp39-cp39-linux_armv6l.whl#sha256=fd8db21cee5bc2feb25360fdd14b561fe2278cd2f7ebdac6cbb563167be6b4a4 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,596 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-1.0.0-cp37-cp37m-linux_armv7l.whl#sha256=ce1b1ea8d8f47fcc38e3753449dccd368b8109b2efaa2fabbf28f69511a12a36 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,596 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-1.0.0-cp37-cp37m-linux_armv6l.whl#sha256=ce1b1ea8d8f47fcc38e3753449dccd368b8109b2efaa2fabbf28f69511a12a36 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,597 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-1.0.0-cp35-cp35m-linux_armv7l.whl#sha256=9b6eb2817a7a78b175d6b976ae3f671cbc4e693d04a847b0003009435fd2611b (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,597 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-1.0.0-cp35-cp35m-linux_armv6l.whl#sha256=9b6eb2817a7a78b175d6b976ae3f671cbc4e693d04a847b0003009435fd2611b (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,598 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-0.1.2-cp311-cp311-linux_armv7l.whl#sha256=07be2c1735aa786a2c200fdaded51338945f782b12e8019f7cce4544e7f0f800 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,598 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-0.1.2-cp311-cp311-linux_armv6l.whl#sha256=07be2c1735aa786a2c200fdaded51338945f782b12e8019f7cce4544e7f0f800 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,599 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-0.1.2-cp39-cp39-linux_armv7l.whl#sha256=8b0601ef73767c3cc9ec2ed5bb9d2c67b3a399c34bf72f33ba21f37cf4639071 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,599 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-0.1.2-cp39-cp39-linux_armv6l.whl#sha256=8b0601ef73767c3cc9ec2ed5bb9d2c67b3a399c34bf72f33ba21f37cf4639071 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,600 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-0.1.2-cp37-cp37m-linux_armv7l.whl#sha256=784b22d657e430d7314de54a2822007f1d5b727cd0bfd34ac6871539849ff0b0 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,600 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-0.1.2-cp37-cp37m-linux_armv6l.whl#sha256=784b22d657e430d7314de54a2822007f1d5b727cd0bfd34ac6871539849ff0b0 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,601 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-0.1.2-cp35-cp35m-linux_armv7l.whl#sha256=f6f83ec1dd772873fb99b88cb13326f76d746054733c9069bec2f3593d100627 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,601 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-0.1.2-cp35-cp35m-linux_armv6l.whl#sha256=f6f83ec1dd772873fb99b88cb13326f76d746054733c9069bec2f3593d100627 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,602 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-0.1.1-cp311-cp311-linux_armv7l.whl#sha256=c5fad2fa9341b47955fc324b19f89b3103916c7c3283e4499498cbc115ac2877 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,602 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-0.1.1-cp311-cp311-linux_armv6l.whl#sha256=c5fad2fa9341b47955fc324b19f89b3103916c7c3283e4499498cbc115ac2877 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,603 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-0.1.1-cp39-cp39-linux_armv7l.whl#sha256=3dae805a4a1a5fd2552fb6404098f510a37140fb6529312ed82a066f540bd465 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,603 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-0.1.1-cp39-cp39-linux_armv6l.whl#sha256=3dae805a4a1a5fd2552fb6404098f510a37140fb6529312ed82a066f540bd465 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,604 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-0.1.1-cp37-cp37m-linux_armv7l.whl#sha256=783fa0fc8ff1003dabd6ae65bfab3554405fd6d6975da7eb94579a2a0d5b6269 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,604 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-0.1.1-cp37-cp37m-linux_armv6l.whl#sha256=783fa0fc8ff1003dabd6ae65bfab3554405fd6d6975da7eb94579a2a0d5b6269 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,605 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-0.1.1-cp35-cp35m-linux_armv7l.whl#sha256=ab96bcab2a29514c5883ed3c6e7238a1f1c51c2ad6ba97dd2d5969f22398c79d (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,605 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-0.1.1-cp35-cp35m-linux_armv6l.whl#sha256=ab96bcab2a29514c5883ed3c6e7238a1f1c51c2ad6ba97dd2d5969f22398c79d (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,606 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-0.1.0-cp311-cp311-linux_armv7l.whl#sha256=bdf8f2776512fc3e95e39e3e34592d34eb397ee9a0f980e213f965dd77b6a4d4 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,606 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-0.1.0-cp311-cp311-linux_armv6l.whl#sha256=bdf8f2776512fc3e95e39e3e34592d34eb397ee9a0f980e213f965dd77b6a4d4 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,607 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-0.1.0-cp39-cp39-linux_armv7l.whl#sha256=d8999bdd959faa9a543c21e696ac632430006a661a66735ac1e4890803ef8e8b (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,608 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-0.1.0-cp39-cp39-linux_armv6l.whl#sha256=d8999bdd959faa9a543c21e696ac632430006a661a66735ac1e4890803ef8e8b (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,608 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-0.1.0-cp37-cp37m-linux_armv7l.whl#sha256=784451271299dd9415908424ebd9046d610c2b278f81769c068ec33bb43db642 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,609 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-0.1.0-cp37-cp37m-linux_armv6l.whl#sha256=784451271299dd9415908424ebd9046d610c2b278f81769c068ec33bb43db642 (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,610 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-0.1.0-cp35-cp35m-linux_armv7l.whl#sha256=fef7e56d588887acf5a4574d9e0beff5682f8c764cfdf7582c345c1e5931a30a (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,610 Skipping link: No binaries permitted for ont-remora: https://www.piwheels.org/simple/ont-remora/ont_remora-0.1.0-cp35-cp35m-linux_armv6l.whl#sha256=fef7e56d588887acf5a4574d9e0beff5682f8c764cfdf7582c345c1e5931a30a (from https://www.piwheels.org/simple/ont-remora/) 2023-09-18T04:23:44,611 Skipping link: not a file: https://www.piwheels.org/simple/ont-remora/ 2023-09-18T04:23:44,612 Skipping link: not a file: https://pypi.org/simple/ont-remora/ 2023-09-18T04:23:44,631 Given no hashes to check 1 links for project 'ont-remora': discarding no candidates 2023-09-18T04:23:44,649 Collecting ont-remora==1.1.1 2023-09-18T04:23:44,652 Created temporary directory: /tmp/pip-unpack-vxg93x54 2023-09-18T04:23:44,790 Downloading ont-remora-1.1.1.tar.gz (42.8 MB) 2023-09-18T04:23:56,569 Added ont-remora==1.1.1 from https://files.pythonhosted.org/packages/c9/04/71e201ef20f2a263d880072e5d6e29dd1573df3ea9afada6a63d3b209006/ont-remora-1.1.1.tar.gz to build tracker '/tmp/pip-build-tracker-pa3pev3p' 2023-09-18T04:23:56,573 Created temporary directory: /tmp/pip-build-env-5ue7019v 2023-09-18T04:23:56,577 Installing build dependencies: started 2023-09-18T04:23:56,579 Running command pip subprocess to install build dependencies 2023-09-18T04:23:57,724 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-09-18T04:23:58,231 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-18T04:23:59,907 Collecting setuptools>=40.8.0 2023-09-18T04:23:59,908 Obtaining dependency information for setuptools>=40.8.0 from https://files.pythonhosted.org/packages/bb/26/7945080113158354380a12ce26873dd6c1ebd88d47f5bc24e2c5bb38c16a/setuptools-68.2.2-py3-none-any.whl.metadata 2023-09-18T04:23:59,914 Using cached setuptools-68.2.2-py3-none-any.whl.metadata (6.3 kB) 2023-09-18T04:24:00,123 Collecting wheel 2023-09-18T04:24:00,142 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB) 2023-09-18T04:24:00,318 Using cached setuptools-68.2.2-py3-none-any.whl (807 kB) 2023-09-18T04:24:02,754 Installing collected packages: wheel, setuptools 2023-09-18T04:24:02,982 Creating /tmp/pip-build-env-5ue7019v/overlay/local/bin 2023-09-18T04:24:02,984 changing mode of /tmp/pip-build-env-5ue7019v/overlay/local/bin/wheel to 755 2023-09-18T04:24:05,186 Successfully installed setuptools-68.2.2 wheel-0.41.2 2023-09-18T04:24:05,717 Installing build dependencies: finished with status 'done' 2023-09-18T04:24:05,720 Getting requirements to build wheel: started 2023-09-18T04:24:05,722 Running command Getting requirements to build wheel 2023-09-18T04:24:06,208 /tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-09-18T04:24:06,208 !! 2023-09-18T04:24:06,209 ******************************************************************************** 2023-09-18T04:24:06,210 Usage of dash-separated 'long-description' will not be supported in future 2023-09-18T04:24:06,210 versions. Please use the underscore name 'long_description' instead. 2023-09-18T04:24:06,211 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-09-18T04:24:06,212 or your builds will no longer be supported. 2023-09-18T04:24:06,213 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-09-18T04:24:06,213 ******************************************************************************** 2023-09-18T04:24:06,214 !! 2023-09-18T04:24:06,215 opt = self.warn_dash_deprecation(opt, section) 2023-09-18T04:24:06,215 /tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-09-18T04:24:06,216 !! 2023-09-18T04:24:06,217 ******************************************************************************** 2023-09-18T04:24:06,217 Usage of dash-separated 'long-description-content-type' will not be supported in future 2023-09-18T04:24:06,218 versions. Please use the underscore name 'long_description_content_type' instead. 2023-09-18T04:24:06,219 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-09-18T04:24:06,219 or your builds will no longer be supported. 2023-09-18T04:24:06,220 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-09-18T04:24:06,220 ******************************************************************************** 2023-09-18T04:24:06,221 !! 2023-09-18T04:24:06,222 opt = self.warn_dash_deprecation(opt, section) 2023-09-18T04:24:06,360 Getting requirements to build wheel: finished with status 'done' 2023-09-18T04:24:06,382 Installing backend dependencies: started 2023-09-18T04:24:06,384 Running command pip subprocess to install backend dependencies 2023-09-18T04:24:07,513 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-09-18T04:24:08,018 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-18T04:24:09,777 Collecting cython 2023-09-18T04:24:09,778 Obtaining dependency information for cython from https://files.pythonhosted.org/packages/03/e9/9cc0c4f0d8a566089d096254cd25168a0db02dd047863a7f995d8d3eefa7/Cython-3.0.2-py2.py3-none-any.whl.metadata 2023-09-18T04:24:09,783 Using cached Cython-3.0.2-py2.py3-none-any.whl.metadata (3.1 kB) 2023-09-18T04:24:09,816 Using cached Cython-3.0.2-py2.py3-none-any.whl (1.2 MB) 2023-09-18T04:24:12,094 Installing collected packages: cython 2023-09-18T04:24:14,800 Creating /tmp/pip-build-env-5ue7019v/normal/local/bin 2023-09-18T04:24:14,802 changing mode of /tmp/pip-build-env-5ue7019v/normal/local/bin/cygdb to 755 2023-09-18T04:24:14,804 changing mode of /tmp/pip-build-env-5ue7019v/normal/local/bin/cython to 755 2023-09-18T04:24:14,806 changing mode of /tmp/pip-build-env-5ue7019v/normal/local/bin/cythonize to 755 2023-09-18T04:24:14,822 Successfully installed cython-3.0.2 2023-09-18T04:24:15,366 Installing backend dependencies: finished with status 'done' 2023-09-18T04:24:15,367 Created temporary directory: /tmp/pip-modern-metadata-8sua98_1 2023-09-18T04:24:15,370 Preparing metadata (pyproject.toml): started 2023-09-18T04:24:15,371 Running command Preparing metadata (pyproject.toml) 2023-09-18T04:24:15,841 /tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:265: UserWarning: Unknown distribution option: 'use_pyscaffold' 2023-09-18T04:24:15,841 warnings.warn(msg) 2023-09-18T04:24:15,866 /tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-09-18T04:24:15,866 !! 2023-09-18T04:24:15,867 ******************************************************************************** 2023-09-18T04:24:15,868 Usage of dash-separated 'long-description' will not be supported in future 2023-09-18T04:24:15,868 versions. Please use the underscore name 'long_description' instead. 2023-09-18T04:24:15,870 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-09-18T04:24:15,870 or your builds will no longer be supported. 2023-09-18T04:24:15,871 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-09-18T04:24:15,872 ******************************************************************************** 2023-09-18T04:24:15,873 !! 2023-09-18T04:24:15,873 opt = self.warn_dash_deprecation(opt, section) 2023-09-18T04:24:15,874 /tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-09-18T04:24:15,875 !! 2023-09-18T04:24:15,876 ******************************************************************************** 2023-09-18T04:24:15,877 Usage of dash-separated 'long-description-content-type' will not be supported in future 2023-09-18T04:24:15,877 versions. Please use the underscore name 'long_description_content_type' instead. 2023-09-18T04:24:15,878 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-09-18T04:24:15,878 or your builds will no longer be supported. 2023-09-18T04:24:15,879 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-09-18T04:24:15,880 ******************************************************************************** 2023-09-18T04:24:15,881 !! 2023-09-18T04:24:15,881 opt = self.warn_dash_deprecation(opt, section) 2023-09-18T04:24:15,961 running dist_info 2023-09-18T04:24:15,981 creating /tmp/pip-modern-metadata-8sua98_1/ont_remora.egg-info 2023-09-18T04:24:15,985 writing /tmp/pip-modern-metadata-8sua98_1/ont_remora.egg-info/PKG-INFO 2023-09-18T04:24:15,991 writing dependency_links to /tmp/pip-modern-metadata-8sua98_1/ont_remora.egg-info/dependency_links.txt 2023-09-18T04:24:15,993 writing entry points to /tmp/pip-modern-metadata-8sua98_1/ont_remora.egg-info/entry_points.txt 2023-09-18T04:24:15,995 writing requirements to /tmp/pip-modern-metadata-8sua98_1/ont_remora.egg-info/requires.txt 2023-09-18T04:24:15,996 writing top-level names to /tmp/pip-modern-metadata-8sua98_1/ont_remora.egg-info/top_level.txt 2023-09-18T04:24:15,997 writing manifest file '/tmp/pip-modern-metadata-8sua98_1/ont_remora.egg-info/SOURCES.txt' 2023-09-18T04:24:16,191 reading manifest file '/tmp/pip-modern-metadata-8sua98_1/ont_remora.egg-info/SOURCES.txt' 2023-09-18T04:24:16,193 reading manifest template 'MANIFEST.in' 2023-09-18T04:24:16,234 adding license file 'LICENSE.txt' 2023-09-18T04:24:16,238 writing manifest file '/tmp/pip-modern-metadata-8sua98_1/ont_remora.egg-info/SOURCES.txt' 2023-09-18T04:24:16,239 creating '/tmp/pip-modern-metadata-8sua98_1/ont_remora-1.1.1.dist-info' 2023-09-18T04:24:16,422 Preparing metadata (pyproject.toml): finished with status 'done' 2023-09-18T04:24:16,427 Source in /tmp/pip-wheel-iif0zgvd/ont-remora_12d961db003340c7a1692056e9e2683a has version 1.1.1, which satisfies requirement ont-remora==1.1.1 from https://files.pythonhosted.org/packages/c9/04/71e201ef20f2a263d880072e5d6e29dd1573df3ea9afada6a63d3b209006/ont-remora-1.1.1.tar.gz 2023-09-18T04:24:16,428 Removed ont-remora==1.1.1 from https://files.pythonhosted.org/packages/c9/04/71e201ef20f2a263d880072e5d6e29dd1573df3ea9afada6a63d3b209006/ont-remora-1.1.1.tar.gz from build tracker '/tmp/pip-build-tracker-pa3pev3p' 2023-09-18T04:24:16,432 Created temporary directory: /tmp/pip-unpack-tk5cju6o 2023-09-18T04:24:16,433 Created temporary directory: /tmp/pip-unpack-bz0tcv3w 2023-09-18T04:24:16,459 Building wheels for collected packages: ont-remora 2023-09-18T04:24:16,463 Created temporary directory: /tmp/pip-wheel-5fkzmk9l 2023-09-18T04:24:16,464 Destination directory: /tmp/pip-wheel-5fkzmk9l 2023-09-18T04:24:16,466 Building wheel for ont-remora (pyproject.toml): started 2023-09-18T04:24:16,467 Running command Building wheel for ont-remora (pyproject.toml) 2023-09-18T04:24:16,920 /tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:265: UserWarning: Unknown distribution option: 'use_pyscaffold' 2023-09-18T04:24:16,920 warnings.warn(msg) 2023-09-18T04:24:16,943 /tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-09-18T04:24:16,944 !! 2023-09-18T04:24:16,945 ******************************************************************************** 2023-09-18T04:24:16,946 Usage of dash-separated 'long-description' will not be supported in future 2023-09-18T04:24:16,946 versions. Please use the underscore name 'long_description' instead. 2023-09-18T04:24:16,947 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-09-18T04:24:16,948 or your builds will no longer be supported. 2023-09-18T04:24:16,949 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-09-18T04:24:16,949 ******************************************************************************** 2023-09-18T04:24:16,950 !! 2023-09-18T04:24:16,950 opt = self.warn_dash_deprecation(opt, section) 2023-09-18T04:24:16,951 /tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-09-18T04:24:16,951 !! 2023-09-18T04:24:16,952 ******************************************************************************** 2023-09-18T04:24:16,953 Usage of dash-separated 'long-description-content-type' will not be supported in future 2023-09-18T04:24:16,953 versions. Please use the underscore name 'long_description_content_type' instead. 2023-09-18T04:24:16,954 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-09-18T04:24:16,954 or your builds will no longer be supported. 2023-09-18T04:24:16,955 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-09-18T04:24:16,956 ******************************************************************************** 2023-09-18T04:24:16,957 !! 2023-09-18T04:24:16,957 opt = self.warn_dash_deprecation(opt, section) 2023-09-18T04:24:17,093 running bdist_wheel 2023-09-18T04:24:17,274 running build 2023-09-18T04:24:17,274 running build_py 2023-09-18T04:24:17,282 creating build 2023-09-18T04:24:17,282 creating build/lib.linux-armv7l-cpython-311 2023-09-18T04:24:17,283 creating build/lib.linux-armv7l-cpython-311/remora 2023-09-18T04:24:17,284 copying src/remora/log.py -> build/lib.linux-armv7l-cpython-311/remora 2023-09-18T04:24:17,286 copying src/remora/validate.py -> build/lib.linux-armv7l-cpython-311/remora 2023-09-18T04:24:17,288 copying src/remora/train_model.py -> build/lib.linux-armv7l-cpython-311/remora 2023-09-18T04:24:17,291 copying src/remora/constants.py -> build/lib.linux-armv7l-cpython-311/remora 2023-09-18T04:24:17,293 copying src/remora/util.py -> build/lib.linux-armv7l-cpython-311/remora 2023-09-18T04:24:17,295 copying src/remora/main.py -> build/lib.linux-armv7l-cpython-311/remora 2023-09-18T04:24:17,297 copying src/remora/model_util.py -> build/lib.linux-armv7l-cpython-311/remora 2023-09-18T04:24:17,299 copying src/remora/prepare_train_data.py -> build/lib.linux-armv7l-cpython-311/remora 2023-09-18T04:24:17,302 copying src/remora/refine_signal_map.py -> build/lib.linux-armv7l-cpython-311/remora 2023-09-18T04:24:17,304 copying src/remora/activations.py -> build/lib.linux-armv7l-cpython-311/remora 2023-09-18T04:24:17,306 copying src/remora/inference.py -> build/lib.linux-armv7l-cpython-311/remora 2023-09-18T04:24:17,308 copying src/remora/data_chunks.py -> build/lib.linux-armv7l-cpython-311/remora 2023-09-18T04:24:17,311 copying src/remora/parsers.py -> build/lib.linux-armv7l-cpython-311/remora 2023-09-18T04:24:17,314 copying src/remora/__init__.py -> build/lib.linux-armv7l-cpython-311/remora 2023-09-18T04:24:17,315 running egg_info 2023-09-18T04:24:17,319 writing src/ont_remora.egg-info/PKG-INFO 2023-09-18T04:24:17,325 writing dependency_links to src/ont_remora.egg-info/dependency_links.txt 2023-09-18T04:24:17,327 writing entry points to src/ont_remora.egg-info/entry_points.txt 2023-09-18T04:24:17,329 writing requirements to src/ont_remora.egg-info/requires.txt 2023-09-18T04:24:17,330 writing top-level names to src/ont_remora.egg-info/top_level.txt 2023-09-18T04:24:17,338 reading manifest file 'src/ont_remora.egg-info/SOURCES.txt' 2023-09-18T04:24:17,342 reading manifest template 'MANIFEST.in' 2023-09-18T04:24:17,363 adding license file 'LICENSE.txt' 2023-09-18T04:24:17,367 writing manifest file 'src/ont_remora.egg-info/SOURCES.txt' 2023-09-18T04:24:17,369 /tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'remora.trained_models' is absent from the `packages` configuration. 2023-09-18T04:24:17,370 !! 2023-09-18T04:24:17,371 ******************************************************************************** 2023-09-18T04:24:17,371 ############################ 2023-09-18T04:24:17,371 # Package would be ignored # 2023-09-18T04:24:17,372 ############################ 2023-09-18T04:24:17,372 Python recognizes 'remora.trained_models' as an importable package[^1], 2023-09-18T04:24:17,373 but it is absent from setuptools' `packages` configuration. 2023-09-18T04:24:17,374 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-18T04:24:17,374 package, please make sure that 'remora.trained_models' is explicitly added 2023-09-18T04:24:17,374 to the `packages` configuration field. 2023-09-18T04:24:17,375 Alternatively, you can also rely on setuptools' discovery methods 2023-09-18T04:24:17,376 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-18T04:24:17,376 instead of `find_packages(...)`/`find:`). 2023-09-18T04:24:17,377 You can read more about "package discovery" on setuptools documentation page: 2023-09-18T04:24:17,378 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-18T04:24:17,379 If you don't want 'remora.trained_models' to be distributed and are 2023-09-18T04:24:17,379 already explicitly excluding 'remora.trained_models' via 2023-09-18T04:24:17,380 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-18T04:24:17,380 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-18T04:24:17,381 combination with a more fine grained `package-data` configuration. 2023-09-18T04:24:17,382 You can read more about "package data files" on setuptools documentation page: 2023-09-18T04:24:17,383 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-18T04:24:17,384 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-18T04:24:17,385 even if it does not contain any `.py` files. 2023-09-18T04:24:17,385 On the other hand, currently there is no concept of package data 2023-09-18T04:24:17,386 directory, all directories are treated like packages. 2023-09-18T04:24:17,386 ******************************************************************************** 2023-09-18T04:24:17,387 !! 2023-09-18T04:24:17,388 check.warn(importable) 2023-09-18T04:24:17,388 copying src/remora/encoded_kmers.pyx -> build/lib.linux-armv7l-cpython-311/remora 2023-09-18T04:24:17,389 copying src/remora/refine_signal_map_core.pyx -> build/lib.linux-armv7l-cpython-311/remora 2023-09-18T04:24:17,389 creating build/lib.linux-armv7l-cpython-311/remora/trained_models 2023-09-18T04:24:17,390 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2 2023-09-18T04:24:17,390 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/fast 2023-09-18T04:24:17,391 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/fast/0.0.0 2023-09-18T04:24:17,391 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/fast/0.0.0/5mc 2023-09-18T04:24:17,392 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/fast/0.0.0/5mc/CG 2023-09-18T04:24:17,392 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/fast/0.0.0/5mc/CG/v0 2023-09-18T04:24:17,393 copying src/remora/trained_models/dna_r10.4.1_e8.2/fast/0.0.0/5mc/CG/v0/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/fast/0.0.0/5mc/CG/v0 2023-09-18T04:24:17,398 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/fast/0.0.0/5mc/CG/v1 2023-09-18T04:24:17,399 copying src/remora/trained_models/dna_r10.4.1_e8.2/fast/0.0.0/5mc/CG/v1/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/fast/0.0.0/5mc/CG/v1 2023-09-18T04:24:17,439 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/fast/v3.5.1 2023-09-18T04:24:17,440 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/fast/v3.5.1/5mc 2023-09-18T04:24:17,441 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/fast/v3.5.1/5mc/CG 2023-09-18T04:24:17,441 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/fast/v3.5.1/5mc/CG/v0 2023-09-18T04:24:17,442 copying src/remora/trained_models/dna_r10.4.1_e8.2/fast/v3.5.1/5mc/CG/v0/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/fast/v3.5.1/5mc/CG/v0 2023-09-18T04:24:17,448 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/fast/v3.5.1/5mc/CG/v1 2023-09-18T04:24:17,449 copying src/remora/trained_models/dna_r10.4.1_e8.2/fast/v3.5.1/5mc/CG/v1/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/fast/v3.5.1/5mc/CG/v1 2023-09-18T04:24:17,479 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/hac 2023-09-18T04:24:17,479 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/hac/0.0.0 2023-09-18T04:24:17,480 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/hac/0.0.0/5mc 2023-09-18T04:24:17,481 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/hac/0.0.0/5mc/CG 2023-09-18T04:24:17,482 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/hac/0.0.0/5mc/CG/v0 2023-09-18T04:24:17,483 copying src/remora/trained_models/dna_r10.4.1_e8.2/hac/0.0.0/5mc/CG/v0/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/hac/0.0.0/5mc/CG/v0 2023-09-18T04:24:17,502 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/hac/0.0.0/5mc/CG/v1 2023-09-18T04:24:17,503 copying src/remora/trained_models/dna_r10.4.1_e8.2/hac/0.0.0/5mc/CG/v1/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/hac/0.0.0/5mc/CG/v1 2023-09-18T04:24:17,549 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/hac/v3.5.1 2023-09-18T04:24:17,550 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/hac/v3.5.1/5mc 2023-09-18T04:24:17,550 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/hac/v3.5.1/5mc/CG 2023-09-18T04:24:17,551 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/hac/v3.5.1/5mc/CG/v0 2023-09-18T04:24:17,553 copying src/remora/trained_models/dna_r10.4.1_e8.2/hac/v3.5.1/5mc/CG/v0/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/hac/v3.5.1/5mc/CG/v0 2023-09-18T04:24:17,573 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/hac/v3.5.1/5mc/CG/v1 2023-09-18T04:24:17,574 copying src/remora/trained_models/dna_r10.4.1_e8.2/hac/v3.5.1/5mc/CG/v1/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/hac/v3.5.1/5mc/CG/v1 2023-09-18T04:24:17,628 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/sup 2023-09-18T04:24:17,629 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/sup/0.0.0 2023-09-18T04:24:17,629 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/sup/0.0.0/5mc 2023-09-18T04:24:17,630 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/sup/0.0.0/5mc/CG 2023-09-18T04:24:17,630 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/sup/0.0.0/5mc/CG/v0 2023-09-18T04:24:17,631 copying src/remora/trained_models/dna_r10.4.1_e8.2/sup/0.0.0/5mc/CG/v0/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/sup/0.0.0/5mc/CG/v0 2023-09-18T04:24:17,650 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/sup/0.0.0/5mc/CG/v1 2023-09-18T04:24:17,651 copying src/remora/trained_models/dna_r10.4.1_e8.2/sup/0.0.0/5mc/CG/v1/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/sup/0.0.0/5mc/CG/v1 2023-09-18T04:24:17,699 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/sup/v3.5.1 2023-09-18T04:24:17,700 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/sup/v3.5.1/5mc 2023-09-18T04:24:17,701 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/sup/v3.5.1/5mc/CG 2023-09-18T04:24:17,702 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/sup/v3.5.1/5mc/CG/v0 2023-09-18T04:24:17,703 copying src/remora/trained_models/dna_r10.4.1_e8.2/sup/v3.5.1/5mc/CG/v0/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/sup/v3.5.1/5mc/CG/v0 2023-09-18T04:24:17,727 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/sup/v3.5.1/5mc/CG/v1 2023-09-18T04:24:17,728 copying src/remora/trained_models/dna_r10.4.1_e8.2/sup/v3.5.1/5mc/CG/v1/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4.1_e8.2/sup/v3.5.1/5mc/CG/v1 2023-09-18T04:24:17,778 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1 2023-09-18T04:24:17,779 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/fast 2023-09-18T04:24:17,780 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/fast/0.0.0 2023-09-18T04:24:17,781 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/fast/0.0.0/5hmc_5mc 2023-09-18T04:24:17,781 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/fast/0.0.0/5hmc_5mc/CG 2023-09-18T04:24:17,782 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/fast/0.0.0/5hmc_5mc/CG/v0 2023-09-18T04:24:17,783 copying src/remora/trained_models/dna_r10.4_e8.1/fast/0.0.0/5hmc_5mc/CG/v0/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/fast/0.0.0/5hmc_5mc/CG/v0 2023-09-18T04:24:17,815 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/fast/0.0.0/5mc 2023-09-18T04:24:17,815 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/fast/0.0.0/5mc/CG 2023-09-18T04:24:17,816 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/fast/0.0.0/5mc/CG/v0 2023-09-18T04:24:17,818 copying src/remora/trained_models/dna_r10.4_e8.1/fast/0.0.0/5mc/CG/v0/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/fast/0.0.0/5mc/CG/v0 2023-09-18T04:24:17,823 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/fast/0.0.0/5mc/CG/v1 2023-09-18T04:24:17,824 copying src/remora/trained_models/dna_r10.4_e8.1/fast/0.0.0/5mc/CG/v1/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/fast/0.0.0/5mc/CG/v1 2023-09-18T04:24:17,858 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/fast/v3.3 2023-09-18T04:24:17,859 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/fast/v3.3/5mc 2023-09-18T04:24:17,860 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/fast/v3.3/5mc/CG 2023-09-18T04:24:17,861 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/fast/v3.3/5mc/CG/v0 2023-09-18T04:24:17,862 copying src/remora/trained_models/dna_r10.4_e8.1/fast/v3.3/5mc/CG/v0/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/fast/v3.3/5mc/CG/v0 2023-09-18T04:24:17,867 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/fast/v3.3/5mc/CG/v1 2023-09-18T04:24:17,868 copying src/remora/trained_models/dna_r10.4_e8.1/fast/v3.3/5mc/CG/v1/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/fast/v3.3/5mc/CG/v1 2023-09-18T04:24:17,903 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/hac 2023-09-18T04:24:17,904 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/hac/0.0.0 2023-09-18T04:24:17,905 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/hac/0.0.0/5hmc_5mc 2023-09-18T04:24:17,906 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/hac/0.0.0/5hmc_5mc/CG 2023-09-18T04:24:17,907 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/hac/0.0.0/5hmc_5mc/CG/v0 2023-09-18T04:24:17,908 copying src/remora/trained_models/dna_r10.4_e8.1/hac/0.0.0/5hmc_5mc/CG/v0/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/hac/0.0.0/5hmc_5mc/CG/v0 2023-09-18T04:24:17,940 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/hac/0.0.0/5mc 2023-09-18T04:24:17,941 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/hac/0.0.0/5mc/CG 2023-09-18T04:24:17,941 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/hac/0.0.0/5mc/CG/v0 2023-09-18T04:24:17,943 copying src/remora/trained_models/dna_r10.4_e8.1/hac/0.0.0/5mc/CG/v0/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/hac/0.0.0/5mc/CG/v0 2023-09-18T04:24:17,964 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/hac/0.0.0/5mc/CG/v1 2023-09-18T04:24:17,965 copying src/remora/trained_models/dna_r10.4_e8.1/hac/0.0.0/5mc/CG/v1/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/hac/0.0.0/5mc/CG/v1 2023-09-18T04:24:18,008 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/hac/v3.3 2023-09-18T04:24:18,008 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/hac/v3.3/5mc 2023-09-18T04:24:18,009 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/hac/v3.3/5mc/CG 2023-09-18T04:24:18,010 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/hac/v3.3/5mc/CG/v0 2023-09-18T04:24:18,011 copying src/remora/trained_models/dna_r10.4_e8.1/hac/v3.3/5mc/CG/v0/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/hac/v3.3/5mc/CG/v0 2023-09-18T04:24:18,030 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/hac/v3.3/5mc/CG/v1 2023-09-18T04:24:18,031 copying src/remora/trained_models/dna_r10.4_e8.1/hac/v3.3/5mc/CG/v1/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/hac/v3.3/5mc/CG/v1 2023-09-18T04:24:18,077 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/sup 2023-09-18T04:24:18,078 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/sup/0.0.0 2023-09-18T04:24:18,079 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/sup/0.0.0/5hmc_5mc 2023-09-18T04:24:18,079 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/sup/0.0.0/5hmc_5mc/CG 2023-09-18T04:24:18,080 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/sup/0.0.0/5hmc_5mc/CG/v0 2023-09-18T04:24:18,082 copying src/remora/trained_models/dna_r10.4_e8.1/sup/0.0.0/5hmc_5mc/CG/v0/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/sup/0.0.0/5hmc_5mc/CG/v0 2023-09-18T04:24:18,111 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/sup/v3.4 2023-09-18T04:24:18,112 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/sup/v3.4/5mc 2023-09-18T04:24:18,112 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/sup/v3.4/5mc/CG 2023-09-18T04:24:18,113 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/sup/v3.4/5mc/CG/v0 2023-09-18T04:24:18,114 copying src/remora/trained_models/dna_r10.4_e8.1/sup/v3.4/5mc/CG/v0/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/sup/v3.4/5mc/CG/v0 2023-09-18T04:24:18,133 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/sup/v3.4/5mc/CG/v1 2023-09-18T04:24:18,134 copying src/remora/trained_models/dna_r10.4_e8.1/sup/v3.4/5mc/CG/v1/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r10.4_e8.1/sup/v3.4/5mc/CG/v1 2023-09-18T04:24:18,180 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8.1 2023-09-18T04:24:18,180 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8.1/fast 2023-09-18T04:24:18,181 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8.1/fast/0.0.0 2023-09-18T04:24:18,182 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8.1/fast/0.0.0/5mc 2023-09-18T04:24:18,182 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8.1/fast/0.0.0/5mc/CG 2023-09-18T04:24:18,183 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8.1/fast/0.0.0/5mc/CG/v0 2023-09-18T04:24:18,185 copying src/remora/trained_models/dna_r9.4.1_e8.1/fast/0.0.0/5mc/CG/v0/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8.1/fast/0.0.0/5mc/CG/v0 2023-09-18T04:24:18,197 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8.1/hac 2023-09-18T04:24:18,197 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8.1/hac/0.0.0 2023-09-18T04:24:18,198 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8.1/hac/0.0.0/5mc 2023-09-18T04:24:18,199 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8.1/hac/0.0.0/5mc/CG 2023-09-18T04:24:18,200 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8.1/hac/0.0.0/5mc/CG/v0 2023-09-18T04:24:18,201 copying src/remora/trained_models/dna_r9.4.1_e8.1/hac/0.0.0/5mc/CG/v0/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8.1/hac/0.0.0/5mc/CG/v0 2023-09-18T04:24:18,211 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8.1/sup 2023-09-18T04:24:18,212 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8.1/sup/0.0.0 2023-09-18T04:24:18,212 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8.1/sup/0.0.0/5mc 2023-09-18T04:24:18,213 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8.1/sup/0.0.0/5mc/CG 2023-09-18T04:24:18,214 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8.1/sup/0.0.0/5mc/CG/v0 2023-09-18T04:24:18,215 copying src/remora/trained_models/dna_r9.4.1_e8.1/sup/0.0.0/5mc/CG/v0/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8.1/sup/0.0.0/5mc/CG/v0 2023-09-18T04:24:18,227 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8 2023-09-18T04:24:18,228 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8/fast 2023-09-18T04:24:18,229 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8/fast/0.0.0 2023-09-18T04:24:18,230 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8/fast/0.0.0/5hmc_5mc 2023-09-18T04:24:18,230 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8/fast/0.0.0/5hmc_5mc/CG 2023-09-18T04:24:18,231 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8/fast/0.0.0/5hmc_5mc/CG/v0 2023-09-18T04:24:18,232 copying src/remora/trained_models/dna_r9.4.1_e8/fast/0.0.0/5hmc_5mc/CG/v0/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8/fast/0.0.0/5hmc_5mc/CG/v0 2023-09-18T04:24:18,264 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8/fast/0.0.0/5mc 2023-09-18T04:24:18,264 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8/fast/0.0.0/5mc/CG 2023-09-18T04:24:18,265 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8/fast/0.0.0/5mc/CG/v0 2023-09-18T04:24:18,266 copying src/remora/trained_models/dna_r9.4.1_e8/fast/0.0.0/5mc/CG/v0/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8/fast/0.0.0/5mc/CG/v0 2023-09-18T04:24:18,278 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8/hac 2023-09-18T04:24:18,278 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8/hac/0.0.0 2023-09-18T04:24:18,280 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8/hac/0.0.0/5hmc_5mc 2023-09-18T04:24:18,281 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8/hac/0.0.0/5hmc_5mc/CG 2023-09-18T04:24:18,282 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8/hac/0.0.0/5hmc_5mc/CG/v0 2023-09-18T04:24:18,283 copying src/remora/trained_models/dna_r9.4.1_e8/hac/0.0.0/5hmc_5mc/CG/v0/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8/hac/0.0.0/5hmc_5mc/CG/v0 2023-09-18T04:24:18,313 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8/hac/0.0.0/5mc 2023-09-18T04:24:18,314 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8/hac/0.0.0/5mc/CG 2023-09-18T04:24:18,314 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8/hac/0.0.0/5mc/CG/v0 2023-09-18T04:24:18,316 copying src/remora/trained_models/dna_r9.4.1_e8/hac/0.0.0/5mc/CG/v0/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8/hac/0.0.0/5mc/CG/v0 2023-09-18T04:24:18,326 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8/sup 2023-09-18T04:24:18,327 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8/sup/0.0.0 2023-09-18T04:24:18,328 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8/sup/0.0.0/5hmc_5mc 2023-09-18T04:24:18,329 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8/sup/0.0.0/5hmc_5mc/CG 2023-09-18T04:24:18,330 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8/sup/0.0.0/5hmc_5mc/CG/v0 2023-09-18T04:24:18,331 copying src/remora/trained_models/dna_r9.4.1_e8/sup/0.0.0/5hmc_5mc/CG/v0/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8/sup/0.0.0/5hmc_5mc/CG/v0 2023-09-18T04:24:18,360 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8/sup/0.0.0/5mc 2023-09-18T04:24:18,361 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8/sup/0.0.0/5mc/CG 2023-09-18T04:24:18,362 creating build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8/sup/0.0.0/5mc/CG/v0 2023-09-18T04:24:18,363 copying src/remora/trained_models/dna_r9.4.1_e8/sup/0.0.0/5mc/CG/v0/modbase_model.onnx -> build/lib.linux-armv7l-cpython-311/remora/trained_models/dna_r9.4.1_e8/sup/0.0.0/5mc/CG/v0 2023-09-18T04:24:18,373 running build_ext 2023-09-18T04:24:22,977 Compiling src/remora/encoded_kmers.pyx because it changed. 2023-09-18T04:24:22,977 [1/1] Cythonizing src/remora/encoded_kmers.pyx 2023-09-18T04:24:22,978 building 'remora.encoded_kmers' extension 2023-09-18T04:24:22,979 creating build/temp.linux-armv7l-cpython-311 2023-09-18T04:24:22,980 creating build/temp.linux-armv7l-cpython-311/src 2023-09-18T04:24:22,981 creating build/temp.linux-armv7l-cpython-311/src/remora 2023-09-18T04:24:22,982 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c src/remora/encoded_kmers.c -o build/temp.linux-armv7l-cpython-311/src/remora/encoded_kmers.o -std=c99 2023-09-18T04:24:44,807 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/remora/encoded_kmers.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/remora/encoded_kmers.cpython-311-arm-linux-gnueabihf.so 2023-09-18T04:24:46,324 Error compiling Cython file: 2023-09-18T04:24:46,324 ------------------------------------------------------------ 2023-09-18T04:24:46,325 ... 2023-09-18T04:24:46,325 int kmer_len 2023-09-18T04:24:46,326 ): 2023-09-18T04:24:46,326 cdef int idx = 0 2023-09-18T04:24:46,326 cdef int kmer_pos 2023-09-18T04:24:46,327 for kmer_pos in range(kmer_len): 2023-09-18T04:24:46,327 idx += int_kmer[kmer_len - kmer_pos - 1] * (4 ** kmer_pos) 2023-09-18T04:24:46,328 ^ 2023-09-18T04:24:46,328 ------------------------------------------------------------ 2023-09-18T04:24:46,329 src/remora/refine_signal_map_core.pyx:83:8: Cannot assign type 'double' to 'int' 2023-09-18T04:24:48,100 Compiling src/remora/refine_signal_map_core.pyx because it changed. 2023-09-18T04:24:48,101 [1/1] Cythonizing src/remora/refine_signal_map_core.pyx 2023-09-18T04:24:48,101 Traceback (most recent call last): 2023-09-18T04:24:48,102 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 353, in 2023-09-18T04:24:48,102 main() 2023-09-18T04:24:48,103 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 335, in main 2023-09-18T04:24:48,104 json_out['return_val'] = hook(**hook_input['kwargs']) 2023-09-18T04:24:48,104 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-18T04:24:48,105 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 251, in build_wheel 2023-09-18T04:24:48,106 return _build_backend().build_wheel(wheel_directory, config_settings, 2023-09-18T04:24:48,107 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-18T04:24:48,107 File "/tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/build_meta.py", line 434, in build_wheel 2023-09-18T04:24:48,108 return self._build_with_temp_dir( 2023-09-18T04:24:48,109 ^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-18T04:24:48,110 File "/tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/build_meta.py", line 419, in _build_with_temp_dir 2023-09-18T04:24:48,110 self.run_setup() 2023-09-18T04:24:48,111 File "/tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/build_meta.py", line 507, in run_setup 2023-09-18T04:24:48,112 super(_BuildMetaLegacyBackend, self).run_setup(setup_script=setup_script) 2023-09-18T04:24:48,113 File "/tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/build_meta.py", line 341, in run_setup 2023-09-18T04:24:48,114 exec(code, locals()) 2023-09-18T04:24:48,115 File "", line 26, in 2023-09-18T04:24:48,116 File "/tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/__init__.py", line 103, in setup 2023-09-18T04:24:48,117 return distutils.core.setup(**attrs) 2023-09-18T04:24:48,118 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-18T04:24:48,119 File "/tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/core.py", line 185, in setup 2023-09-18T04:24:48,120 return run_commands(dist) 2023-09-18T04:24:48,120 ^^^^^^^^^^^^^^^^^^ 2023-09-18T04:24:48,121 File "/tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/core.py", line 201, in run_commands 2023-09-18T04:24:48,122 dist.run_commands() 2023-09-18T04:24:48,122 File "/tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py", line 969, in run_commands 2023-09-18T04:24:48,123 self.run_command(cmd) 2023-09-18T04:24:48,123 File "/tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py", line 989, in run_command 2023-09-18T04:24:48,124 super().run_command(command) 2023-09-18T04:24:48,125 File "/tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py", line 988, in run_command 2023-09-18T04:24:48,126 cmd_obj.run() 2023-09-18T04:24:48,127 File "/tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/wheel/bdist_wheel.py", line 364, in run 2023-09-18T04:24:48,128 self.run_command("build") 2023-09-18T04:24:48,129 File "/tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py", line 318, in run_command 2023-09-18T04:24:48,130 self.distribution.run_command(command) 2023-09-18T04:24:48,131 File "/tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py", line 989, in run_command 2023-09-18T04:24:48,132 super().run_command(command) 2023-09-18T04:24:48,132 File "/tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py", line 988, in run_command 2023-09-18T04:24:48,133 cmd_obj.run() 2023-09-18T04:24:48,135 File "/tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/command/build.py", line 131, in run 2023-09-18T04:24:48,136 self.run_command(cmd_name) 2023-09-18T04:24:48,136 File "/tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py", line 318, in run_command 2023-09-18T04:24:48,137 self.distribution.run_command(command) 2023-09-18T04:24:48,138 File "/tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py", line 989, in run_command 2023-09-18T04:24:48,140 super().run_command(command) 2023-09-18T04:24:48,140 File "/tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py", line 988, in run_command 2023-09-18T04:24:48,141 cmd_obj.run() 2023-09-18T04:24:48,142 File "/tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_ext.py", line 88, in run 2023-09-18T04:24:48,143 _build_ext.run(self) 2023-09-18T04:24:48,144 File "/tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/command/build_ext.py", line 345, in run 2023-09-18T04:24:48,144 self.build_extensions() 2023-09-18T04:24:48,145 File "/tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/command/build_ext.py", line 467, in build_extensions 2023-09-18T04:24:48,146 self._build_extensions_serial() 2023-09-18T04:24:48,147 File "/tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/command/build_ext.py", line 493, in _build_extensions_serial 2023-09-18T04:24:48,147 self.build_extension(ext) 2023-09-18T04:24:48,149 File "/tmp/pip-build-env-5ue7019v/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_ext.py", line 249, in build_extension 2023-09-18T04:24:48,150 _build_ext.build_extension(self, ext) 2023-09-18T04:24:48,151 File "/tmp/pip-build-env-5ue7019v/normal/local/lib/python3.11/dist-packages/Cython/Distutils/build_ext.py", line 122, in build_extension 2023-09-18T04:24:48,152 new_ext = cythonize( 2023-09-18T04:24:48,153 ^^^^^^^^^^ 2023-09-18T04:24:48,154 File "/tmp/pip-build-env-5ue7019v/normal/local/lib/python3.11/dist-packages/Cython/Build/Dependencies.py", line 1134, in cythonize 2023-09-18T04:24:48,155 cythonize_one(*args) 2023-09-18T04:24:48,156 File "/tmp/pip-build-env-5ue7019v/normal/local/lib/python3.11/dist-packages/Cython/Build/Dependencies.py", line 1301, in cythonize_one 2023-09-18T04:24:48,157 raise CompileError(None, pyx_file) 2023-09-18T04:24:48,158 Cython.Compiler.Errors.CompileError: src/remora/refine_signal_map_core.pyx 2023-09-18T04:24:48,514 ERROR: [present-rich] Building wheel for ont-remora (pyproject.toml) exited with 1 2023-09-18T04:24:48,528 [bold magenta]full command[/]: [blue]/usr/bin/python3 /usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py build_wheel /tmp/tmpk2u17yfw[/] 2023-09-18T04:24:48,529 [bold magenta]cwd[/]: /tmp/pip-wheel-iif0zgvd/ont-remora_12d961db003340c7a1692056e9e2683a 2023-09-18T04:24:48,529 Building wheel for ont-remora (pyproject.toml): finished with status 'error' 2023-09-18T04:24:48,533 ERROR: Failed building wheel for ont-remora 2023-09-18T04:24:48,536 Failed to build ont-remora 2023-09-18T04:24:48,538 ERROR: Failed to build one or more wheels 2023-09-18T04:24:48,540 Exception information: 2023-09-18T04:24:48,540 Traceback (most recent call last): 2023-09-18T04:24:48,540 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper 2023-09-18T04:24:48,540 status = run_func(*args) 2023-09-18T04:24:48,540 ^^^^^^^^^^^^^^^ 2023-09-18T04:24:48,540 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper 2023-09-18T04:24:48,540 return func(self, options, args) 2023-09-18T04:24:48,540 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-18T04:24:48,540 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 181, in run 2023-09-18T04:24:48,540 raise CommandError("Failed to build one or more wheels") 2023-09-18T04:24:48,540 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2023-09-18T04:24:48,545 Removed build tracker: '/tmp/pip-build-tracker-pa3pev3p'