2023-09-18T08:40:16,634 Created temporary directory: /tmp/pip-build-tracker-cvcrcc6z
2023-09-18T08:40:16,635 Initialized build tracking at /tmp/pip-build-tracker-cvcrcc6z
2023-09-18T08:40:16,635 Created build tracker: /tmp/pip-build-tracker-cvcrcc6z
2023-09-18T08:40:16,636 Entered build tracker: /tmp/pip-build-tracker-cvcrcc6z
2023-09-18T08:40:16,637 Created temporary directory: /tmp/pip-wheel-f_dm6a5z
2023-09-18T08:40:16,639 Created temporary directory: /tmp/pip-ephem-wheel-cache-u0i4ycq8
2023-09-18T08:40:16,661 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-18T08:40:16,665 2 location(s) to search for versions of capice:
2023-09-18T08:40:16,665 * https://pypi.org/simple/capice/
2023-09-18T08:40:16,665 * https://www.piwheels.org/simple/capice/
2023-09-18T08:40:16,666 Fetching project page and analyzing links: https://pypi.org/simple/capice/
2023-09-18T08:40:16,667 Getting page https://pypi.org/simple/capice/
2023-09-18T08:40:16,668 Found index url https://pypi.org/simple/
2023-09-18T08:40:16,931 Fetched page https://pypi.org/simple/capice/ as application/vnd.pypi.simple.v1+json
2023-09-18T08:40:16,936   Found link https://files.pythonhosted.org/packages/2b/cf/eeb11d53ea46d9463d108113249f8a5b8c3023b3822835fd2579c3351924/capice-3.0.0rc0.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.7), version: 3.0.0rc0
2023-09-18T08:40:16,937   Found link https://files.pythonhosted.org/packages/c9/09/fdf73572fc6b25f60b4a5b2729454b1560abff6dd9f7907f45d86bd0ec88/capice-3.0.0rc1.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.0.0rc1
2023-09-18T08:40:16,938   Found link https://files.pythonhosted.org/packages/93/94/a86e20a50a6ae585d21896e5348b2ee157c3a7f49a22e53a014884d069d1/capice-3.0.0rc2.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.0.0rc2
2023-09-18T08:40:16,939   Found link https://files.pythonhosted.org/packages/09/dc/8e44c3e88c1ee6402c17fb3c06b4e56d7580e55dd384f3c6f5c0c9f539ef/capice-3.0.0rc3.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.0.0rc3
2023-09-18T08:40:16,940   Found link https://files.pythonhosted.org/packages/d4/f2/05c3cdda4c711aaddea306235e5b860009d706ba41652ce147ab893aded6/capice-3.0.0rc4.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.0.0rc4
2023-09-18T08:40:16,941   Found link https://files.pythonhosted.org/packages/7a/9f/ef01e39c2096b2cb591e626e9f2631a1226675292da6dd00f805fc832caa/capice-3.0.0.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.0.0
2023-09-18T08:40:16,942   Found link https://files.pythonhosted.org/packages/d4/b4/16c7d979e9bbc625d3914a08da81d0ad0b7960e87b555bb193f5aa3e3d6a/capice-3.1.0.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.1.0
2023-09-18T08:40:16,943   Found link https://files.pythonhosted.org/packages/64/e1/52f85026c4aa93f4a09f2dc8b517abb86d471a8e6b202533c63780fa70e1/capice-3.1.1.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.1.1
2023-09-18T08:40:16,944   Found link https://files.pythonhosted.org/packages/1d/b1/69553bd909b8e972ebf1912f60e71d4ccfa44b221b4ec7d1ae1d5b5c8165/capice-3.1.2.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.1.2
2023-09-18T08:40:16,945   Found link https://files.pythonhosted.org/packages/6b/2e/1bae984c4c990f95db34a0d12b327083437649d05d93606618d6030b8cfb/capice-3.2.0.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.2.0
2023-09-18T08:40:16,946   Found link https://files.pythonhosted.org/packages/f2/46/3fed1bfa6a7e413dda2dcacc72ebcba5cd27e81a300314e8c6b440ba0652/capice-3.2.1.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.2.1
2023-09-18T08:40:16,947   Found link https://files.pythonhosted.org/packages/8e/ec/a0d20fce261cadb53b7674ce6d83f21587812c3d7ed4552c2876e32401b2/capice-3.3.0.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.3.0
2023-09-18T08:40:16,948   Found link https://files.pythonhosted.org/packages/e4/39/4c67eadadb4e9ee8b008065c117d11eed66c173c8f03ac1a66c0c80230b0/capice-4.0.0rc1.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 4.0.0rc1
2023-09-18T08:40:16,949   Found link https://files.pythonhosted.org/packages/c8/d4/0b8b9a2459e3bf9ac9ee9fbbfcef0cf633423cd1164d247ef5b35e6bcc1d/capice-4.0.0rc2.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 4.0.0rc2
2023-09-18T08:40:16,950   Found link https://files.pythonhosted.org/packages/ab/ea/b25218d9cbed242679b75aaec27f079eb7271c1338a215fba25f82757b69/capice-4.0.0rc3.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 4.0.0rc3
2023-09-18T08:40:16,951   Found link https://files.pythonhosted.org/packages/44/b9/874d875171dacc166a20b55344da900e3b48b2fac242aaa4e3de80cb542c/capice-4.0.0.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 4.0.0
2023-09-18T08:40:16,952   Found link https://files.pythonhosted.org/packages/4e/78/45d9b78adf34a83e1d0868b8da615a315a94d4ca9c3765ec201787a4df43/capice-5.0.0.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 5.0.0
2023-09-18T08:40:16,953   Found link https://files.pythonhosted.org/packages/24/b1/befd125478991c586c6bb9f46d34b67257c43cd7d4372e5edb022c5a55ae/capice-5.1.0.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.10), version: 5.1.0
2023-09-18T08:40:16,954   Found link https://files.pythonhosted.org/packages/98/79/f72187b2c35a46322752abe0af8d6fa793c9514912ab97ea2bb24e6c9b64/capice-5.1.1.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.10), version: 5.1.1
2023-09-18T08:40:16,954 Fetching project page and analyzing links: https://www.piwheels.org/simple/capice/
2023-09-18T08:40:16,955 Getting page https://www.piwheels.org/simple/capice/
2023-09-18T08:40:16,956 Found index url https://www.piwheels.org/simple/
2023-09-18T08:40:19,251 Fetched page https://www.piwheels.org/simple/capice/ as text/html
2023-09-18T08:40:19,263   Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-5.0.0-py3-none-any.whl#sha256=5585dc67c452f748016bb4583e4eda883d6c53186d400221a0646c17ae49017f (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8)
2023-09-18T08:40:19,265   Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-4.0.0-py3-none-any.whl#sha256=ce4003f7b2d92c69f5096e472af55dff5d10864006ef1fbef028b5ab884bd7d4 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8)
2023-09-18T08:40:19,266   Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-4.0.0rc3-py3-none-any.whl#sha256=65ae05d21fe56f15b779ccd358ade7c4d0485aa382fdf139afeddb23204df0aa (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8)
2023-09-18T08:40:19,267   Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-4.0.0rc2-py3-none-any.whl#sha256=9edddaa9ec8bdd22de63608d73b375f392d24b4b24a3140e339b90f4526b336f (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8)
2023-09-18T08:40:19,268   Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-4.0.0rc1-py3-none-any.whl#sha256=2ffdc4d32ff14ea03e7417e65ac6f49c3fb84ebc8a2b0e904801a4762469b21c (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8)
2023-09-18T08:40:19,269   Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.3.0-py3-none-any.whl#sha256=b9a9a3cdfdb1ab474a6183c643babd3470fa84e8c5e3b2c8099a9ffee1c41956 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8)
2023-09-18T08:40:19,270   Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.2.1-py3-none-any.whl#sha256=caad9b489f7b29a386b2dce7cb3e01d94d301d2b01ba16e3e094c7aa91435063 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8)
2023-09-18T08:40:19,271   Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.2.0-py3-none-any.whl#sha256=b6968da8c90315bcb78449563ad20ff306de8792c485fb03fe2eed8cf19d9f8f (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8)
2023-09-18T08:40:19,272   Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.1.1-py3-none-any.whl#sha256=4a76c336e6de10af5b82b9e4beb6bb7c2c8eaf792b1b9ab51e6aa14e45068559 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8)
2023-09-18T08:40:19,274   Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.1.0-py3-none-any.whl#sha256=ca32fea76a4d432bfaf9ba50b17860b5e1859f71b8ee95ccc9cee625690e6217 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8)
2023-09-18T08:40:19,274   Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0-py3-none-any.whl#sha256=822a9c4b54c3814a1879371edfcd207b4c59c26e284a85b4367d4f9c0e070a8b (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8)
2023-09-18T08:40:19,275   Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0rc4-py3-none-any.whl#sha256=b8174ee252046b7075aa5b0bff762c95a39bef20b98a032f842c74b1e7bf9a29 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8)
2023-09-18T08:40:19,276   Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0rc3-py3-none-any.whl#sha256=4ee7f781a7a6edacfb38af661fab250bdb707a6f63b57c56612ff132ceb55c74 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8)
2023-09-18T08:40:19,277   Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0rc2-py3-none-any.whl#sha256=f67afcd30fc1b242beb1b3631528be28745036179d8f8ff75fdd07d13c163206 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8)
2023-09-18T08:40:19,278   Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0rc1-py3-none-any.whl#sha256=1f1a3830a436ef9f9f34370a93dea81e04b8e4761fd8ecae8ce10955c1dddac2 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8)
2023-09-18T08:40:19,279   Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0rc0-py3-none-any.whl#sha256=db7e870e65a264aa8b90e67c7ad2b62ed2662d850fac021fe20eafa759ccd21a (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.7)
2023-09-18T08:40:19,280 Skipping link: not a file: https://www.piwheels.org/simple/capice/
2023-09-18T08:40:19,281 Skipping link: not a file: https://pypi.org/simple/capice/
2023-09-18T08:40:19,318 Given no hashes to check 1 links for project 'capice': discarding no candidates
2023-09-18T08:40:19,336 Collecting capice==3.1.2
2023-09-18T08:40:19,338   Created temporary directory: /tmp/pip-unpack-914vd2m2
2023-09-18T08:40:19,552   Downloading capice-3.1.2.tar.gz (32 kB)
2023-09-18T08:40:19,659   Added capice==3.1.2 from https://files.pythonhosted.org/packages/1d/b1/69553bd909b8e972ebf1912f60e71d4ccfa44b221b4ec7d1ae1d5b5c8165/capice-3.1.2.tar.gz to build tracker '/tmp/pip-build-tracker-cvcrcc6z'
2023-09-18T08:40:19,661   Running setup.py (path:/tmp/pip-wheel-f_dm6a5z/capice_a5a1d7630d4440d08a75fb4c98ddf45c/setup.py) egg_info for package capice
2023-09-18T08:40:19,662   Created temporary directory: /tmp/pip-pip-egg-info-8uafxhgj
2023-09-18T08:40:19,662   Preparing metadata (setup.py): started
2023-09-18T08:40:19,664   Running command python setup.py egg_info
2023-09-18T08:40:20,680   running egg_info
2023-09-18T08:40:20,681   creating /tmp/pip-pip-egg-info-8uafxhgj/capice.egg-info
2023-09-18T08:40:20,705   writing /tmp/pip-pip-egg-info-8uafxhgj/capice.egg-info/PKG-INFO
2023-09-18T08:40:20,709   writing dependency_links to /tmp/pip-pip-egg-info-8uafxhgj/capice.egg-info/dependency_links.txt
2023-09-18T08:40:20,710   writing entry points to /tmp/pip-pip-egg-info-8uafxhgj/capice.egg-info/entry_points.txt
2023-09-18T08:40:20,712   writing requirements to /tmp/pip-pip-egg-info-8uafxhgj/capice.egg-info/requires.txt
2023-09-18T08:40:20,713   writing top-level names to /tmp/pip-pip-egg-info-8uafxhgj/capice.egg-info/top_level.txt
2023-09-18T08:40:20,715   writing manifest file '/tmp/pip-pip-egg-info-8uafxhgj/capice.egg-info/SOURCES.txt'
2023-09-18T08:40:20,793   reading manifest file '/tmp/pip-pip-egg-info-8uafxhgj/capice.egg-info/SOURCES.txt'
2023-09-18T08:40:20,794   adding license file 'LICENSE'
2023-09-18T08:40:20,797   writing manifest file '/tmp/pip-pip-egg-info-8uafxhgj/capice.egg-info/SOURCES.txt'
2023-09-18T08:40:20,905   Preparing metadata (setup.py): finished with status 'done'
2023-09-18T08:40:20,910   Source in /tmp/pip-wheel-f_dm6a5z/capice_a5a1d7630d4440d08a75fb4c98ddf45c has version 3.1.2, which satisfies requirement capice==3.1.2 from https://files.pythonhosted.org/packages/1d/b1/69553bd909b8e972ebf1912f60e71d4ccfa44b221b4ec7d1ae1d5b5c8165/capice-3.1.2.tar.gz
2023-09-18T08:40:20,911   Removed capice==3.1.2 from https://files.pythonhosted.org/packages/1d/b1/69553bd909b8e972ebf1912f60e71d4ccfa44b221b4ec7d1ae1d5b5c8165/capice-3.1.2.tar.gz from build tracker '/tmp/pip-build-tracker-cvcrcc6z'
2023-09-18T08:40:20,918 Created temporary directory: /tmp/pip-unpack-16w0dofd
2023-09-18T08:40:20,919 Created temporary directory: /tmp/pip-unpack-wv8brru3
2023-09-18T08:40:20,935 Building wheels for collected packages: capice
2023-09-18T08:40:20,939   Created temporary directory: /tmp/pip-wheel-ccjp11xs
2023-09-18T08:40:20,940   Building wheel for capice (setup.py): started
2023-09-18T08:40:20,941   Destination directory: /tmp/pip-wheel-ccjp11xs
2023-09-18T08:40:20,941   Running command python setup.py bdist_wheel
2023-09-18T08:40:21,919   running bdist_wheel
2023-09-18T08:40:22,009   running build
2023-09-18T08:40:22,010   running build_py
2023-09-18T08:40:22,036   creating build
2023-09-18T08:40:22,037   creating build/lib
2023-09-18T08:40:22,037   creating build/lib/molgenis
2023-09-18T08:40:22,038   creating build/lib/molgenis/capice
2023-09-18T08:40:22,039   copying src/molgenis/capice/main_capice.py -> build/lib/molgenis/capice
2023-09-18T08:40:22,042   copying src/molgenis/capice/capice.py -> build/lib/molgenis/capice
2023-09-18T08:40:22,043   copying src/molgenis/capice/main_train.py -> build/lib/molgenis/capice
2023-09-18T08:40:22,045   copying src/molgenis/capice/main_predict.py -> build/lib/molgenis/capice
2023-09-18T08:40:22,047   copying src/molgenis/capice/__init__.py -> build/lib/molgenis/capice
2023-09-18T08:40:22,050   creating build/lib/molgenis/capice/utilities
2023-09-18T08:40:22,050   copying src/molgenis/capice/utilities/enums.py -> build/lib/molgenis/capice/utilities
2023-09-18T08:40:22,052   copying src/molgenis/capice/utilities/input_parser.py -> build/lib/molgenis/capice/utilities
2023-09-18T08:40:22,054   copying src/molgenis/capice/utilities/load_file_postprocessor.py -> build/lib/molgenis/capice/utilities
2023-09-18T08:40:22,056   copying src/molgenis/capice/utilities/custom_logging_filter.py -> build/lib/molgenis/capice/utilities
2023-09-18T08:40:22,057   copying src/molgenis/capice/utilities/dynamic_loader.py -> build/lib/molgenis/capice/utilities
2023-09-18T08:40:22,060   copying src/molgenis/capice/utilities/input_processor.py -> build/lib/molgenis/capice/utilities
2023-09-18T08:40:22,061   copying src/molgenis/capice/utilities/predictor.py -> build/lib/molgenis/capice/utilities
2023-09-18T08:40:22,063   copying src/molgenis/capice/utilities/capice_imputing.py -> build/lib/molgenis/capice/utilities
2023-09-18T08:40:22,065   copying src/molgenis/capice/utilities/__init__.py -> build/lib/molgenis/capice/utilities
2023-09-18T08:40:22,067   copying src/molgenis/capice/utilities/preprocessor.py -> build/lib/molgenis/capice/utilities
2023-09-18T08:40:22,069   copying src/molgenis/capice/utilities/class_suggestor.py -> build/lib/molgenis/capice/utilities
2023-09-18T08:40:22,071   copying src/molgenis/capice/utilities/manual_vep_processor.py -> build/lib/molgenis/capice/utilities
2023-09-18T08:40:22,073   creating build/lib/molgenis/capice/vep
2023-09-18T08:40:22,074   copying src/molgenis/capice/vep/template_sift_polyphen.py -> build/lib/molgenis/capice/vep
2023-09-18T08:40:22,076   copying src/molgenis/capice/vep/sift.py -> build/lib/molgenis/capice/vep
2023-09-18T08:40:22,078   copying src/molgenis/capice/vep/seq.py -> build/lib/molgenis/capice/vep
2023-09-18T08:40:22,079   copying src/molgenis/capice/vep/protein_position.py -> build/lib/molgenis/capice/vep
2023-09-18T08:40:22,081   copying src/molgenis/capice/vep/cds_position.py -> build/lib/molgenis/capice/vep
2023-09-18T08:40:22,082   copying src/molgenis/capice/vep/amino_acids.py -> build/lib/molgenis/capice/vep
2023-09-18T08:40:22,084   copying src/molgenis/capice/vep/cdna_position.py -> build/lib/molgenis/capice/vep
2023-09-18T08:40:22,086   copying src/molgenis/capice/vep/consequence.py -> build/lib/molgenis/capice/vep
2023-09-18T08:40:22,087   copying src/molgenis/capice/vep/length.py -> build/lib/molgenis/capice/vep
2023-09-18T08:40:22,089   copying src/molgenis/capice/vep/template.py -> build/lib/molgenis/capice/vep
2023-09-18T08:40:22,090   copying src/molgenis/capice/vep/__init__.py -> build/lib/molgenis/capice/vep
2023-09-18T08:40:22,092   copying src/molgenis/capice/vep/poly_phen.py -> build/lib/molgenis/capice/vep
2023-09-18T08:40:22,093   copying src/molgenis/capice/vep/template_position.py -> build/lib/molgenis/capice/vep
2023-09-18T08:40:22,095   copying src/molgenis/capice/vep/type.py -> build/lib/molgenis/capice/vep
2023-09-18T08:40:22,097   creating build/lib/molgenis/capice/core
2023-09-18T08:40:22,098   copying src/molgenis/capice/core/args_handler.py -> build/lib/molgenis/capice/core
2023-09-18T08:40:22,100   copying src/molgenis/capice/core/capice_manager.py -> build/lib/molgenis/capice/core
2023-09-18T08:40:22,102   copying src/molgenis/capice/core/__init__.py -> build/lib/molgenis/capice/core
2023-09-18T08:40:22,103   copying src/molgenis/capice/core/logger.py -> build/lib/molgenis/capice/core
2023-09-18T08:40:22,105   copying src/molgenis/capice/core/capice_exporter.py -> build/lib/molgenis/capice/core
2023-09-18T08:40:22,108   creating build/lib/molgenis/capice/cli
2023-09-18T08:40:22,109   copying src/molgenis/capice/cli/args_handler_parent.py -> build/lib/molgenis/capice/cli
2023-09-18T08:40:22,111   copying src/molgenis/capice/cli/args_handler_train.py -> build/lib/molgenis/capice/cli
2023-09-18T08:40:22,113   copying src/molgenis/capice/cli/args_handler_predict.py -> build/lib/molgenis/capice/cli
2023-09-18T08:40:22,115   copying src/molgenis/capice/cli/__init__.py -> build/lib/molgenis/capice/cli
2023-09-18T08:40:22,117   creating build/lib/molgenis/capice/validators
2023-09-18T08:40:22,118   copying src/molgenis/capice/validators/post_vep_processing_validator.py -> build/lib/molgenis/capice/validators
2023-09-18T08:40:22,120   copying src/molgenis/capice/validators/post_file_parse_validator.py -> build/lib/molgenis/capice/validators
2023-09-18T08:40:22,121   copying src/molgenis/capice/validators/property_type_validator.py -> build/lib/molgenis/capice/validators
2023-09-18T08:40:22,123   copying src/molgenis/capice/validators/version_validator.py -> build/lib/molgenis/capice/validators
2023-09-18T08:40:22,125   copying src/molgenis/capice/validators/__init__.py -> build/lib/molgenis/capice/validators
2023-09-18T08:40:22,126   copying src/molgenis/capice/validators/input_validator.py -> build/lib/molgenis/capice/validators
2023-09-18T08:40:22,156   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2023-09-18T08:40:22,157   !!

2023-09-18T08:40:22,158           ********************************************************************************
2023-09-18T08:40:22,159           Please avoid running ``setup.py`` directly.
2023-09-18T08:40:22,160           Instead, use pypa/build, pypa/installer or other
2023-09-18T08:40:22,161           standards-based tools.

2023-09-18T08:40:22,162           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2023-09-18T08:40:22,163           ********************************************************************************

2023-09-18T08:40:22,164   !!
2023-09-18T08:40:22,164     self.initialize_options()
2023-09-18T08:40:22,181   installing to build/bdist.linux-armv7l/wheel
2023-09-18T08:40:22,182   running install
2023-09-18T08:40:22,205   running install_lib
2023-09-18T08:40:22,229   creating build/bdist.linux-armv7l
2023-09-18T08:40:22,229   creating build/bdist.linux-armv7l/wheel
2023-09-18T08:40:22,231   creating build/bdist.linux-armv7l/wheel/molgenis
2023-09-18T08:40:22,232   creating build/bdist.linux-armv7l/wheel/molgenis/capice
2023-09-18T08:40:22,234   copying build/lib/molgenis/capice/main_capice.py -> build/bdist.linux-armv7l/wheel/molgenis/capice
2023-09-18T08:40:22,236   creating build/bdist.linux-armv7l/wheel/molgenis/capice/utilities
2023-09-18T08:40:22,237   copying build/lib/molgenis/capice/utilities/enums.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities
2023-09-18T08:40:22,239   copying build/lib/molgenis/capice/utilities/input_parser.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities
2023-09-18T08:40:22,241   copying build/lib/molgenis/capice/utilities/load_file_postprocessor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities
2023-09-18T08:40:22,243   copying build/lib/molgenis/capice/utilities/custom_logging_filter.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities
2023-09-18T08:40:22,244   copying build/lib/molgenis/capice/utilities/dynamic_loader.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities
2023-09-18T08:40:22,246   copying build/lib/molgenis/capice/utilities/input_processor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities
2023-09-18T08:40:22,248   copying build/lib/molgenis/capice/utilities/predictor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities
2023-09-18T08:40:22,250   copying build/lib/molgenis/capice/utilities/capice_imputing.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities
2023-09-18T08:40:22,251   copying build/lib/molgenis/capice/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities
2023-09-18T08:40:22,253   copying build/lib/molgenis/capice/utilities/preprocessor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities
2023-09-18T08:40:22,255   copying build/lib/molgenis/capice/utilities/class_suggestor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities
2023-09-18T08:40:22,257   copying build/lib/molgenis/capice/utilities/manual_vep_processor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities
2023-09-18T08:40:22,259   creating build/bdist.linux-armv7l/wheel/molgenis/capice/vep
2023-09-18T08:40:22,260   copying build/lib/molgenis/capice/vep/template_sift_polyphen.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep
2023-09-18T08:40:22,262   copying build/lib/molgenis/capice/vep/sift.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep
2023-09-18T08:40:22,264   copying build/lib/molgenis/capice/vep/seq.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep
2023-09-18T08:40:22,266   copying build/lib/molgenis/capice/vep/protein_position.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep
2023-09-18T08:40:22,267   copying build/lib/molgenis/capice/vep/cds_position.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep
2023-09-18T08:40:22,269   copying build/lib/molgenis/capice/vep/amino_acids.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep
2023-09-18T08:40:22,271   copying build/lib/molgenis/capice/vep/cdna_position.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep
2023-09-18T08:40:22,273   copying build/lib/molgenis/capice/vep/consequence.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep
2023-09-18T08:40:22,274   copying build/lib/molgenis/capice/vep/length.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep
2023-09-18T08:40:22,276   copying build/lib/molgenis/capice/vep/template.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep
2023-09-18T08:40:22,278   copying build/lib/molgenis/capice/vep/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep
2023-09-18T08:40:22,280   copying build/lib/molgenis/capice/vep/poly_phen.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep
2023-09-18T08:40:22,281   copying build/lib/molgenis/capice/vep/template_position.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep
2023-09-18T08:40:22,283   copying build/lib/molgenis/capice/vep/type.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep
2023-09-18T08:40:22,285   copying build/lib/molgenis/capice/capice.py -> build/bdist.linux-armv7l/wheel/molgenis/capice
2023-09-18T08:40:22,286   copying build/lib/molgenis/capice/main_train.py -> build/bdist.linux-armv7l/wheel/molgenis/capice
2023-09-18T08:40:22,288   copying build/lib/molgenis/capice/main_predict.py -> build/bdist.linux-armv7l/wheel/molgenis/capice
2023-09-18T08:40:22,290   creating build/bdist.linux-armv7l/wheel/molgenis/capice/core
2023-09-18T08:40:22,291   copying build/lib/molgenis/capice/core/args_handler.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/core
2023-09-18T08:40:22,293   copying build/lib/molgenis/capice/core/capice_manager.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/core
2023-09-18T08:40:22,294   copying build/lib/molgenis/capice/core/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/core
2023-09-18T08:40:22,296   copying build/lib/molgenis/capice/core/logger.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/core
2023-09-18T08:40:22,298   copying build/lib/molgenis/capice/core/capice_exporter.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/core
2023-09-18T08:40:22,299   copying build/lib/molgenis/capice/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice
2023-09-18T08:40:22,301   creating build/bdist.linux-armv7l/wheel/molgenis/capice/cli
2023-09-18T08:40:22,302   copying build/lib/molgenis/capice/cli/args_handler_parent.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/cli
2023-09-18T08:40:22,304   copying build/lib/molgenis/capice/cli/args_handler_train.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/cli
2023-09-18T08:40:22,306   copying build/lib/molgenis/capice/cli/args_handler_predict.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/cli
2023-09-18T08:40:22,308   copying build/lib/molgenis/capice/cli/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/cli
2023-09-18T08:40:22,309   creating build/bdist.linux-armv7l/wheel/molgenis/capice/validators
2023-09-18T08:40:22,310   copying build/lib/molgenis/capice/validators/post_vep_processing_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators
2023-09-18T08:40:22,312   copying build/lib/molgenis/capice/validators/post_file_parse_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators
2023-09-18T08:40:22,314   copying build/lib/molgenis/capice/validators/property_type_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators
2023-09-18T08:40:22,315   copying build/lib/molgenis/capice/validators/version_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators
2023-09-18T08:40:22,317   copying build/lib/molgenis/capice/validators/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators
2023-09-18T08:40:22,319   copying build/lib/molgenis/capice/validators/input_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators
2023-09-18T08:40:22,320   running install_egg_info
2023-09-18T08:40:22,378   running egg_info
2023-09-18T08:40:22,402   writing src/capice.egg-info/PKG-INFO
2023-09-18T08:40:22,406   writing dependency_links to src/capice.egg-info/dependency_links.txt
2023-09-18T08:40:22,407   writing entry points to src/capice.egg-info/entry_points.txt
2023-09-18T08:40:22,409   writing requirements to src/capice.egg-info/requires.txt
2023-09-18T08:40:22,411   writing top-level names to src/capice.egg-info/top_level.txt
2023-09-18T08:40:22,440   reading manifest file 'src/capice.egg-info/SOURCES.txt'
2023-09-18T08:40:22,443   adding license file 'LICENSE'
2023-09-18T08:40:22,446   writing manifest file 'src/capice.egg-info/SOURCES.txt'
2023-09-18T08:40:22,448   Copying src/capice.egg-info to build/bdist.linux-armv7l/wheel/capice-3.1.2-py3.11.egg-info
2023-09-18T08:40:22,459   running install_scripts
2023-09-18T08:40:22,478   creating build/bdist.linux-armv7l/wheel/capice-3.1.2.dist-info/WHEEL
2023-09-18T08:40:22,480   creating '/tmp/pip-wheel-ccjp11xs/capice-3.1.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-09-18T08:40:22,483   adding 'molgenis/capice/__init__.py'
2023-09-18T08:40:22,485   adding 'molgenis/capice/capice.py'
2023-09-18T08:40:22,486   adding 'molgenis/capice/main_capice.py'
2023-09-18T08:40:22,487   adding 'molgenis/capice/main_predict.py'
2023-09-18T08:40:22,489   adding 'molgenis/capice/main_train.py'
2023-09-18T08:40:22,491   adding 'molgenis/capice/cli/__init__.py'
2023-09-18T08:40:22,492   adding 'molgenis/capice/cli/args_handler_parent.py'
2023-09-18T08:40:22,493   adding 'molgenis/capice/cli/args_handler_predict.py'
2023-09-18T08:40:22,495   adding 'molgenis/capice/cli/args_handler_train.py'
2023-09-18T08:40:22,496   adding 'molgenis/capice/core/__init__.py'
2023-09-18T08:40:22,497   adding 'molgenis/capice/core/args_handler.py'
2023-09-18T08:40:22,499   adding 'molgenis/capice/core/capice_exporter.py'
2023-09-18T08:40:22,500   adding 'molgenis/capice/core/capice_manager.py'
2023-09-18T08:40:22,501   adding 'molgenis/capice/core/logger.py'
2023-09-18T08:40:22,503   adding 'molgenis/capice/utilities/__init__.py'
2023-09-18T08:40:22,505   adding 'molgenis/capice/utilities/capice_imputing.py'
2023-09-18T08:40:22,506   adding 'molgenis/capice/utilities/class_suggestor.py'
2023-09-18T08:40:22,507   adding 'molgenis/capice/utilities/custom_logging_filter.py'
2023-09-18T08:40:22,508   adding 'molgenis/capice/utilities/dynamic_loader.py'
2023-09-18T08:40:22,510   adding 'molgenis/capice/utilities/enums.py'
2023-09-18T08:40:22,511   adding 'molgenis/capice/utilities/input_parser.py'
2023-09-18T08:40:22,512   adding 'molgenis/capice/utilities/input_processor.py'
2023-09-18T08:40:22,513   adding 'molgenis/capice/utilities/load_file_postprocessor.py'
2023-09-18T08:40:22,515   adding 'molgenis/capice/utilities/manual_vep_processor.py'
2023-09-18T08:40:22,516   adding 'molgenis/capice/utilities/predictor.py'
2023-09-18T08:40:22,517   adding 'molgenis/capice/utilities/preprocessor.py'
2023-09-18T08:40:22,519   adding 'molgenis/capice/validators/__init__.py'
2023-09-18T08:40:22,521   adding 'molgenis/capice/validators/input_validator.py'
2023-09-18T08:40:22,522   adding 'molgenis/capice/validators/post_file_parse_validator.py'
2023-09-18T08:40:22,523   adding 'molgenis/capice/validators/post_vep_processing_validator.py'
2023-09-18T08:40:22,525   adding 'molgenis/capice/validators/property_type_validator.py'
2023-09-18T08:40:22,526   adding 'molgenis/capice/validators/version_validator.py'
2023-09-18T08:40:22,528   adding 'molgenis/capice/vep/__init__.py'
2023-09-18T08:40:22,529   adding 'molgenis/capice/vep/amino_acids.py'
2023-09-18T08:40:22,530   adding 'molgenis/capice/vep/cdna_position.py'
2023-09-18T08:40:22,531   adding 'molgenis/capice/vep/cds_position.py'
2023-09-18T08:40:22,532   adding 'molgenis/capice/vep/consequence.py'
2023-09-18T08:40:22,534   adding 'molgenis/capice/vep/length.py'
2023-09-18T08:40:22,535   adding 'molgenis/capice/vep/poly_phen.py'
2023-09-18T08:40:22,536   adding 'molgenis/capice/vep/protein_position.py'
2023-09-18T08:40:22,537   adding 'molgenis/capice/vep/seq.py'
2023-09-18T08:40:22,538   adding 'molgenis/capice/vep/sift.py'
2023-09-18T08:40:22,540   adding 'molgenis/capice/vep/template.py'
2023-09-18T08:40:22,541   adding 'molgenis/capice/vep/template_position.py'
2023-09-18T08:40:22,542   adding 'molgenis/capice/vep/template_sift_polyphen.py'
2023-09-18T08:40:22,543   adding 'molgenis/capice/vep/type.py'
2023-09-18T08:40:22,545   adding 'capice-3.1.2.dist-info/LICENSE'
2023-09-18T08:40:22,547   adding 'capice-3.1.2.dist-info/METADATA'
2023-09-18T08:40:22,549   adding 'capice-3.1.2.dist-info/WHEEL'
2023-09-18T08:40:22,550   adding 'capice-3.1.2.dist-info/entry_points.txt'
2023-09-18T08:40:22,550   adding 'capice-3.1.2.dist-info/top_level.txt'
2023-09-18T08:40:22,552   adding 'capice-3.1.2.dist-info/RECORD'
2023-09-18T08:40:22,554   removing build/bdist.linux-armv7l/wheel
2023-09-18T08:40:22,677   Building wheel for capice (setup.py): finished with status 'done'
2023-09-18T08:40:22,680   Created wheel for capice: filename=capice-3.1.2-py3-none-any.whl size=48332 sha256=4e9ba6eb75e3459d60954fa5914d742476306fd2fd43c9f0718720c4d0bc769e
2023-09-18T08:40:22,681   Stored in directory: /tmp/pip-ephem-wheel-cache-u0i4ycq8/wheels/a5/3e/cc/5be18f7ef2bdd5f594f01a19795d18087cd63d702b948369af
2023-09-18T08:40:22,694 Successfully built capice
2023-09-18T08:40:22,699 Removed build tracker: '/tmp/pip-build-tracker-cvcrcc6z'