2023-09-18T17:09:47,085 Created temporary directory: /tmp/pip-build-tracker-6di3cqc2
2023-09-18T17:09:47,086 Initialized build tracking at /tmp/pip-build-tracker-6di3cqc2
2023-09-18T17:09:47,087 Created build tracker: /tmp/pip-build-tracker-6di3cqc2
2023-09-18T17:09:47,087 Entered build tracker: /tmp/pip-build-tracker-6di3cqc2
2023-09-18T17:09:47,088 Created temporary directory: /tmp/pip-wheel-5rxm6ao3
2023-09-18T17:09:47,091 Created temporary directory: /tmp/pip-ephem-wheel-cache-n9qybv8y
2023-09-18T17:09:47,113 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-18T17:09:47,116 2 location(s) to search for versions of bioen:
2023-09-18T17:09:47,116 * https://pypi.org/simple/bioen/
2023-09-18T17:09:47,116 * https://www.piwheels.org/simple/bioen/
2023-09-18T17:09:47,117 Fetching project page and analyzing links: https://pypi.org/simple/bioen/
2023-09-18T17:09:47,118 Getting page https://pypi.org/simple/bioen/
2023-09-18T17:09:47,120 Found index url https://pypi.org/simple/
2023-09-18T17:09:47,341 Fetched page https://pypi.org/simple/bioen/ as application/vnd.pypi.simple.v1+json
2023-09-18T17:09:47,343   Skipping link: No binaries permitted for bioen: https://files.pythonhosted.org/packages/e8/72/d84e7a1948bb08b25c83c740546027d27b3daa601bc4eb471aed6e6d99c6/bioen-0.1.2-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/bioen/)
2023-09-18T17:09:47,344   Skipping link: No binaries permitted for bioen: https://files.pythonhosted.org/packages/65/24/a8ff33f261d69c5ca8b39f13b31076c1976a995fdb3f443d03672f993258/bioen-0.1.2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/bioen/)
2023-09-18T17:09:47,344   Skipping link: No binaries permitted for bioen: https://files.pythonhosted.org/packages/15/37/7c6d0827cefd20315d03ce77f1c1f70fb28caa993ca3bc4aa3b5b77e4c67/bioen-0.1.2-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/bioen/)
2023-09-18T17:09:47,345   Skipping link: No binaries permitted for bioen: https://files.pythonhosted.org/packages/d4/d6/5e6c5ec45b33ee1174d6442ea65f0bf94af29d6121f1cc1d84242bbd8fde/bioen-0.1.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/bioen/)
2023-09-18T17:09:47,346   Found link https://files.pythonhosted.org/packages/7a/f9/8c82f09b480376a64815fac6482104760ec7c29af14c064cfaa365c433d5/bioen-0.1.2.tar.gz (from https://pypi.org/simple/bioen/), version: 0.1.2
2023-09-18T17:09:47,346 Fetching project page and analyzing links: https://www.piwheels.org/simple/bioen/
2023-09-18T17:09:47,347 Getting page https://www.piwheels.org/simple/bioen/
2023-09-18T17:09:47,349 Found index url https://www.piwheels.org/simple/
2023-09-18T17:09:47,627 Fetched page https://www.piwheels.org/simple/bioen/ as text/html
2023-09-18T17:09:47,628 Skipping link: not a file: https://www.piwheels.org/simple/bioen/
2023-09-18T17:09:47,629 Skipping link: not a file: https://pypi.org/simple/bioen/
2023-09-18T17:09:47,647 Given no hashes to check 1 links for project 'bioen': discarding no candidates
2023-09-18T17:09:47,665 Collecting bioen==0.1.2
2023-09-18T17:09:47,667   Created temporary directory: /tmp/pip-unpack-bdu8zeof
2023-09-18T17:09:48,477   Downloading bioen-0.1.2.tar.gz (5.8 MB)
2023-09-18T17:09:50,197   Added bioen==0.1.2 from https://files.pythonhosted.org/packages/7a/f9/8c82f09b480376a64815fac6482104760ec7c29af14c064cfaa365c433d5/bioen-0.1.2.tar.gz to build tracker '/tmp/pip-build-tracker-6di3cqc2'
2023-09-18T17:09:50,198   Running setup.py (path:/tmp/pip-wheel-5rxm6ao3/bioen_f4ba4a9cb15345479f4bb07322d09a1a/setup.py) egg_info for package bioen
2023-09-18T17:09:50,199   Created temporary directory: /tmp/pip-pip-egg-info-n_umtyxk
2023-09-18T17:09:50,200   Preparing metadata (setup.py): started
2023-09-18T17:09:50,201   Running command python setup.py egg_info
2023-09-18T17:09:50,849   Traceback (most recent call last):
2023-09-18T17:09:50,850     File "<string>", line 2, in <module>
2023-09-18T17:09:50,850     File "<pip-setuptools-caller>", line 34, in <module>
2023-09-18T17:09:50,852     File "/tmp/pip-wheel-5rxm6ao3/bioen_f4ba4a9cb15345479f4bb07322d09a1a/setup.py", line 8, in <module>
2023-09-18T17:09:50,853       from Cython.Distutils import build_ext
2023-09-18T17:09:50,854   ModuleNotFoundError: No module named 'Cython'
2023-09-18T17:09:50,952   ERROR: [present-rich] python setup.py egg_info exited with 1
2023-09-18T17:09:50,965   [bold magenta]full command[/]: [blue]/usr/bin/python3 -c '
2023-09-18T17:09:50,965   exec(compile('"'"''"'"''"'"'
2023-09-18T17:09:50,965   # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2023-09-18T17:09:50,965   #
2023-09-18T17:09:50,965   # - It imports setuptools before invoking setup.py, to enable projects that directly
2023-09-18T17:09:50,965   #   import from `distutils.core` to work with newer packaging standards.
2023-09-18T17:09:50,965   # - It provides a clear error message when setuptools is not installed.
2023-09-18T17:09:50,965   # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2023-09-18T17:09:50,965   #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2023-09-18T17:09:50,965   #     manifest_maker: standard file '"'"'-c'"'"' not found".
2023-09-18T17:09:50,965   # - It generates a shim setup.py, for handling setup.cfg-only projects.
2023-09-18T17:09:50,965   import os, sys, tokenize
2023-09-18T17:09:50,965   
2023-09-18T17:09:50,965   try:
2023-09-18T17:09:50,965       import setuptools
2023-09-18T17:09:50,965   except ImportError as error:
2023-09-18T17:09:50,965       print(
2023-09-18T17:09:50,965           "ERROR: Can not execute `setup.py` since setuptools is not available in "
2023-09-18T17:09:50,965           "the build environment.",
2023-09-18T17:09:50,965           file=sys.stderr,
2023-09-18T17:09:50,965       )
2023-09-18T17:09:50,965       sys.exit(1)
2023-09-18T17:09:50,965   
2023-09-18T17:09:50,965   __file__ = %r
2023-09-18T17:09:50,965   sys.argv[0] = __file__
2023-09-18T17:09:50,965   
2023-09-18T17:09:50,965   if os.path.exists(__file__):
2023-09-18T17:09:50,965       filename = __file__
2023-09-18T17:09:50,965       with tokenize.open(__file__) as f:
2023-09-18T17:09:50,965           setup_py_code = f.read()
2023-09-18T17:09:50,965   else:
2023-09-18T17:09:50,965       filename = "<auto-generated setuptools caller>"
2023-09-18T17:09:50,965       setup_py_code = "from setuptools import setup; setup()"
2023-09-18T17:09:50,965   
2023-09-18T17:09:50,965   exec(compile(setup_py_code, filename, "exec"))
2023-09-18T17:09:50,965   '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-5rxm6ao3/bioen_f4ba4a9cb15345479f4bb07322d09a1a/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-n_umtyxk[/]
2023-09-18T17:09:50,965   [bold magenta]cwd[/]: /tmp/pip-wheel-5rxm6ao3/bioen_f4ba4a9cb15345479f4bb07322d09a1a/
2023-09-18T17:09:50,966   Preparing metadata (setup.py): finished with status 'error'
2023-09-18T17:09:50,967 ERROR: [present-rich] metadata generation failed
2023-09-18T17:09:50,974 Exception information:
2023-09-18T17:09:50,974 Traceback (most recent call last):
2023-09-18T17:09:50,974   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 64, in generate_metadata
2023-09-18T17:09:50,974     call_subprocess(
2023-09-18T17:09:50,974   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess
2023-09-18T17:09:50,974     raise error
2023-09-18T17:09:50,974 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1
2023-09-18T17:09:50,974 
2023-09-18T17:09:50,974 The above exception was the direct cause of the following exception:
2023-09-18T17:09:50,974 
2023-09-18T17:09:50,974 Traceback (most recent call last):
2023-09-18T17:09:50,974   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper
2023-09-18T17:09:50,974     status = run_func(*args)
2023-09-18T17:09:50,974              ^^^^^^^^^^^^^^^
2023-09-18T17:09:50,974   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper
2023-09-18T17:09:50,974     return func(self, options, args)
2023-09-18T17:09:50,974            ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-18T17:09:50,974   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 147, in run
2023-09-18T17:09:50,974     requirement_set = resolver.resolve(reqs, check_supported_wheels=True)
2023-09-18T17:09:50,974                       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-18T17:09:50,974   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 92, in resolve
2023-09-18T17:09:50,974     result = self._result = resolver.resolve(
2023-09-18T17:09:50,974                             ^^^^^^^^^^^^^^^^^
2023-09-18T17:09:50,974   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 546, in resolve
2023-09-18T17:09:50,974     state = resolution.resolve(requirements, max_rounds=max_rounds)
2023-09-18T17:09:50,974             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-18T17:09:50,974   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 397, in resolve
2023-09-18T17:09:50,974     self._add_to_criteria(self.state.criteria, r, parent=None)
2023-09-18T17:09:50,974   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria
2023-09-18T17:09:50,974     if not criterion.candidates:
2023-09-18T17:09:50,974   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/structs.py", line 156, in __bool__
2023-09-18T17:09:50,974     return bool(self._sequence)
2023-09-18T17:09:50,974            ^^^^^^^^^^^^^^^^^^^^
2023-09-18T17:09:50,974   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__
2023-09-18T17:09:50,974     return any(self)
2023-09-18T17:09:50,974            ^^^^^^^^^
2023-09-18T17:09:50,974   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in <genexpr>
2023-09-18T17:09:50,974     return (c for c in iterator if id(c) not in self._incompatible_ids)
2023-09-18T17:09:50,974            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-18T17:09:50,974   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built
2023-09-18T17:09:50,974     candidate = func()
2023-09-18T17:09:50,974                 ^^^^^^
2023-09-18T17:09:50,974   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 206, in _make_candidate_from_link
2023-09-18T17:09:50,974     self._link_candidate_cache[link] = LinkCandidate(
2023-09-18T17:09:50,974                                        ^^^^^^^^^^^^^^
2023-09-18T17:09:50,974   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 293, in __init__
2023-09-18T17:09:50,974     super().__init__(
2023-09-18T17:09:50,974   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 156, in __init__
2023-09-18T17:09:50,974     self.dist = self._prepare()
2023-09-18T17:09:50,974                 ^^^^^^^^^^^^^^^
2023-09-18T17:09:50,974   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 225, in _prepare
2023-09-18T17:09:50,974     dist = self._prepare_distribution()
2023-09-18T17:09:50,974            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-18T17:09:50,974   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 304, in _prepare_distribution
2023-09-18T17:09:50,974     return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True)
2023-09-18T17:09:50,974            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-18T17:09:50,974   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 538, in prepare_linked_requirement
2023-09-18T17:09:50,974     return self._prepare_linked_requirement(req, parallel_builds)
2023-09-18T17:09:50,974            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-18T17:09:50,974   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 653, in _prepare_linked_requirement
2023-09-18T17:09:50,974     dist = _get_prepared_distribution(
2023-09-18T17:09:50,974            ^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-18T17:09:50,974   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 69, in _get_prepared_distribution
2023-09-18T17:09:50,974     abstract_dist.prepare_distribution_metadata(
2023-09-18T17:09:50,974   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/distributions/sdist.py", line 61, in prepare_distribution_metadata
2023-09-18T17:09:50,974     self.req.prepare_metadata()
2023-09-18T17:09:50,974   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/req/req_install.py", line 568, in prepare_metadata
2023-09-18T17:09:50,974     self.metadata_directory = generate_metadata_legacy(
2023-09-18T17:09:50,974                               ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-18T17:09:50,974   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 71, in generate_metadata
2023-09-18T17:09:50,974     raise MetadataGenerationFailed(package_details=details) from error
2023-09-18T17:09:50,974 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed
2023-09-18T17:09:50,986 Removed bioen==0.1.2 from https://files.pythonhosted.org/packages/7a/f9/8c82f09b480376a64815fac6482104760ec7c29af14c064cfaa365c433d5/bioen-0.1.2.tar.gz from build tracker '/tmp/pip-build-tracker-6di3cqc2'
2023-09-18T17:09:50,987 Removed build tracker: '/tmp/pip-build-tracker-6di3cqc2'