2023-09-19T06:41:23,162 Created temporary directory: /tmp/pip-build-tracker-psj6wa40 2023-09-19T06:41:23,163 Initialized build tracking at /tmp/pip-build-tracker-psj6wa40 2023-09-19T06:41:23,164 Created build tracker: /tmp/pip-build-tracker-psj6wa40 2023-09-19T06:41:23,164 Entered build tracker: /tmp/pip-build-tracker-psj6wa40 2023-09-19T06:41:23,165 Created temporary directory: /tmp/pip-wheel-k2e7e1o5 2023-09-19T06:41:23,168 Created temporary directory: /tmp/pip-ephem-wheel-cache-j8o4_3n7 2023-09-19T06:41:23,189 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-19T06:41:23,193 2 location(s) to search for versions of salmoneuadmix: 2023-09-19T06:41:23,193 * https://pypi.org/simple/salmoneuadmix/ 2023-09-19T06:41:23,193 * https://www.piwheels.org/simple/salmoneuadmix/ 2023-09-19T06:41:23,194 Fetching project page and analyzing links: https://pypi.org/simple/salmoneuadmix/ 2023-09-19T06:41:23,194 Getting page https://pypi.org/simple/salmoneuadmix/ 2023-09-19T06:41:23,196 Found index url https://pypi.org/simple/ 2023-09-19T06:41:23,334 Fetched page https://pypi.org/simple/salmoneuadmix/ as application/vnd.pypi.simple.v1+json 2023-09-19T06:41:23,337 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/ac/6c/d55d6e46d0aebb1fe51656138cdc6e01048cb5e25a65282e891de40ed4a3/SalmonEuAdmix-1.0.0-py3.9.egg (from https://pypi.org/simple/salmoneuadmix/) (requires-python:>=3.9.7) 2023-09-19T06:41:23,338 Found link https://files.pythonhosted.org/packages/46/02/c46dacf87ac208b322330b720c9ba9fffaf95ed97e421f208c9089ae956f/SalmonEuAdmix-1.0.0.tar.gz (from https://pypi.org/simple/salmoneuadmix/) (requires-python:>=3.9.7), version: 1.0.0 2023-09-19T06:41:23,339 Found link https://files.pythonhosted.org/packages/35/c1/ef58e9f9e446610352ac6a8ed5f74974ee34ec34f2030e62545ef184e78f/SalmonEuAdmix-1.0.1.tar.gz (from https://pypi.org/simple/salmoneuadmix/) (requires-python:>=3.9.7), version: 1.0.1 2023-09-19T06:41:23,340 Found link https://files.pythonhosted.org/packages/61/4e/57b292c2053a990290bd2283a027d0c7d3d481c03d689e675bc56c0756b7/SalmonEuAdmix-1.0.2.tar.gz (from https://pypi.org/simple/salmoneuadmix/) (requires-python:>=3.9.7), version: 1.0.2 2023-09-19T06:41:23,341 Found link https://files.pythonhosted.org/packages/e4/f1/cab8385f4ac01fb0a61427038c8ce76ee143428f0dd8aa740d1dde507241/SalmonEuAdmix-1.0.3.tar.gz (from https://pypi.org/simple/salmoneuadmix/) (requires-python:>=3.9.7), version: 1.0.3 2023-09-19T06:41:23,342 Found link https://files.pythonhosted.org/packages/fc/53/3b1d038a9135b4ee9c5e3c4583c23870c5151dee153ef15d07d2d020b157/SalmonEuAdmix-1.0.4.tar.gz (from https://pypi.org/simple/salmoneuadmix/) (requires-python:>=3.9.7), version: 1.0.4 2023-09-19T06:41:23,343 Skipping link: No binaries permitted for salmoneuadmix: https://files.pythonhosted.org/packages/c9/8a/3561a14424c2e34c2aee7c9fec06567a0d862d9e5adf2b1fe065d573a240/SalmonEuAdmix-1.0.5-py3-none-any.whl (from https://pypi.org/simple/salmoneuadmix/) (requires-python:>=3.9.7) 2023-09-19T06:41:23,344 Found link https://files.pythonhosted.org/packages/e6/74/26cfa2b49034313bb36ac06d1db5ea844a4de58cecda654a150484d39071/SalmonEuAdmix-1.0.5.tar.gz (from https://pypi.org/simple/salmoneuadmix/) (requires-python:>=3.9.7), version: 1.0.5 2023-09-19T06:41:23,345 Skipping link: No binaries permitted for salmoneuadmix: https://files.pythonhosted.org/packages/71/de/d577b8d44960e5aaedc8776cf61b6d5d7dd28caad67725a8ea765de85475/SalmonEuAdmix-1.0.6-py3-none-any.whl (from https://pypi.org/simple/salmoneuadmix/) (requires-python:>=3.9.7) 2023-09-19T06:41:23,346 Found link https://files.pythonhosted.org/packages/3b/49/1110aa1def695f795291ffb3559710f3d090e8aba1738e0f713f0c7881aa/SalmonEuAdmix-1.0.6.tar.gz (from https://pypi.org/simple/salmoneuadmix/) (requires-python:>=3.9.7), version: 1.0.6 2023-09-19T06:41:23,346 Fetching project page and analyzing links: https://www.piwheels.org/simple/salmoneuadmix/ 2023-09-19T06:41:23,347 Getting page https://www.piwheels.org/simple/salmoneuadmix/ 2023-09-19T06:41:23,348 Found index url https://www.piwheels.org/simple/ 2023-09-19T06:41:23,619 Fetched page https://www.piwheels.org/simple/salmoneuadmix/ as text/html 2023-09-19T06:41:23,620 Skipping link: not a file: https://www.piwheels.org/simple/salmoneuadmix/ 2023-09-19T06:41:23,621 Skipping link: not a file: https://pypi.org/simple/salmoneuadmix/ 2023-09-19T06:41:23,639 Given no hashes to check 1 links for project 'salmoneuadmix': discarding no candidates 2023-09-19T06:41:23,657 Collecting salmoneuadmix==1.0.3 2023-09-19T06:41:23,660 Created temporary directory: /tmp/pip-unpack-4j7lrvjk 2023-09-19T06:41:23,966 Downloading SalmonEuAdmix-1.0.3.tar.gz (72 kB) 2023-09-19T06:41:24,110 Added salmoneuadmix==1.0.3 from https://files.pythonhosted.org/packages/e4/f1/cab8385f4ac01fb0a61427038c8ce76ee143428f0dd8aa740d1dde507241/SalmonEuAdmix-1.0.3.tar.gz to build tracker '/tmp/pip-build-tracker-psj6wa40' 2023-09-19T06:41:24,111 Running setup.py (path:/tmp/pip-wheel-k2e7e1o5/salmoneuadmix_fc23c99d94644e049c2af1f6a43e6985/setup.py) egg_info for package salmoneuadmix 2023-09-19T06:41:24,112 Created temporary directory: /tmp/pip-pip-egg-info-rxh7j86e 2023-09-19T06:41:24,113 Preparing metadata (setup.py): started 2023-09-19T06:41:24,114 Running command python setup.py egg_info 2023-09-19T06:41:25,149 running egg_info 2023-09-19T06:41:25,150 creating /tmp/pip-pip-egg-info-rxh7j86e/SalmonEuAdmix.egg-info 2023-09-19T06:41:25,174 writing /tmp/pip-pip-egg-info-rxh7j86e/SalmonEuAdmix.egg-info/PKG-INFO 2023-09-19T06:41:25,177 writing dependency_links to /tmp/pip-pip-egg-info-rxh7j86e/SalmonEuAdmix.egg-info/dependency_links.txt 2023-09-19T06:41:25,178 writing entry points to /tmp/pip-pip-egg-info-rxh7j86e/SalmonEuAdmix.egg-info/entry_points.txt 2023-09-19T06:41:25,180 writing requirements to /tmp/pip-pip-egg-info-rxh7j86e/SalmonEuAdmix.egg-info/requires.txt 2023-09-19T06:41:25,181 writing top-level names to /tmp/pip-pip-egg-info-rxh7j86e/SalmonEuAdmix.egg-info/top_level.txt 2023-09-19T06:41:25,182 writing manifest file '/tmp/pip-pip-egg-info-rxh7j86e/SalmonEuAdmix.egg-info/SOURCES.txt' 2023-09-19T06:41:25,257 reading manifest file '/tmp/pip-pip-egg-info-rxh7j86e/SalmonEuAdmix.egg-info/SOURCES.txt' 2023-09-19T06:41:25,258 adding license file 'LICENCE.md' 2023-09-19T06:41:25,260 writing manifest file '/tmp/pip-pip-egg-info-rxh7j86e/SalmonEuAdmix.egg-info/SOURCES.txt' 2023-09-19T06:41:25,369 Preparing metadata (setup.py): finished with status 'done' 2023-09-19T06:41:25,372 Source in /tmp/pip-wheel-k2e7e1o5/salmoneuadmix_fc23c99d94644e049c2af1f6a43e6985 has version 1.0.3, which satisfies requirement salmoneuadmix==1.0.3 from https://files.pythonhosted.org/packages/e4/f1/cab8385f4ac01fb0a61427038c8ce76ee143428f0dd8aa740d1dde507241/SalmonEuAdmix-1.0.3.tar.gz 2023-09-19T06:41:25,373 Removed salmoneuadmix==1.0.3 from https://files.pythonhosted.org/packages/e4/f1/cab8385f4ac01fb0a61427038c8ce76ee143428f0dd8aa740d1dde507241/SalmonEuAdmix-1.0.3.tar.gz from build tracker '/tmp/pip-build-tracker-psj6wa40' 2023-09-19T06:41:25,379 Created temporary directory: /tmp/pip-unpack-qt67bnla 2023-09-19T06:41:25,380 Created temporary directory: /tmp/pip-unpack-vhkng72m 2023-09-19T06:41:25,388 Building wheels for collected packages: salmoneuadmix 2023-09-19T06:41:25,392 Created temporary directory: /tmp/pip-wheel-yqojkvzm 2023-09-19T06:41:25,393 Building wheel for salmoneuadmix (setup.py): started 2023-09-19T06:41:25,394 Destination directory: /tmp/pip-wheel-yqojkvzm 2023-09-19T06:41:25,394 Running command python setup.py bdist_wheel 2023-09-19T06:41:26,368 running bdist_wheel 2023-09-19T06:41:26,460 running build 2023-09-19T06:41:26,461 running build_py 2023-09-19T06:41:26,487 creating build 2023-09-19T06:41:26,487 creating build/lib 2023-09-19T06:41:26,488 creating build/lib/SalmonEuAdmix 2023-09-19T06:41:26,489 copying SalmonEuAdmix/model.py -> build/lib/SalmonEuAdmix 2023-09-19T06:41:26,491 copying SalmonEuAdmix/__init__.py -> build/lib/SalmonEuAdmix 2023-09-19T06:41:26,493 copying SalmonEuAdmix/cli.py -> build/lib/SalmonEuAdmix 2023-09-19T06:41:26,495 copying SalmonEuAdmix/encode.py -> build/lib/SalmonEuAdmix 2023-09-19T06:41:26,498 creating build/lib/SalmonEuAdmix/data 2023-09-19T06:41:26,499 copying SalmonEuAdmix/data/y_scaler_v4 -> build/lib/SalmonEuAdmix/data 2023-09-19T06:41:26,501 copying SalmonEuAdmix/data/unit_test2.ped -> build/lib/SalmonEuAdmix/data 2023-09-19T06:41:26,504 copying SalmonEuAdmix/data/panel_513_data.map -> build/lib/SalmonEuAdmix/data 2023-09-19T06:41:26,507 copying SalmonEuAdmix/data/panel_513_data.ped -> build/lib/SalmonEuAdmix/data 2023-09-19T06:41:26,509 copying SalmonEuAdmix/data/reduced_marker_list.pkl -> build/lib/SalmonEuAdmix/data 2023-09-19T06:41:26,511 copying SalmonEuAdmix/data/unit_test2.map -> build/lib/SalmonEuAdmix/data 2023-09-19T06:41:26,514 copying SalmonEuAdmix/data/panel_301_data.ped -> build/lib/SalmonEuAdmix/data 2023-09-19T06:41:26,516 copying SalmonEuAdmix/data/panel_301_data.map -> build/lib/SalmonEuAdmix/data 2023-09-19T06:41:26,518 copying SalmonEuAdmix/data/SNP_impute_info.pkl -> build/lib/SalmonEuAdmix/data 2023-09-19T06:41:26,521 copying SalmonEuAdmix/data/SNP_major_minor_info.pkl -> build/lib/SalmonEuAdmix/data 2023-09-19T06:41:26,524 copying SalmonEuAdmix/data/X_scaler_v1 -> build/lib/SalmonEuAdmix/data 2023-09-19T06:41:26,526 copying SalmonEuAdmix/data/y_scaler_v1 -> build/lib/SalmonEuAdmix/data 2023-09-19T06:41:26,528 copying SalmonEuAdmix/data/X_scaler_v4 -> build/lib/SalmonEuAdmix/data 2023-09-19T06:41:26,555 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-09-19T06:41:26,555 !! 2023-09-19T06:41:26,556 ******************************************************************************** 2023-09-19T06:41:26,557 Please avoid running ``setup.py`` directly. 2023-09-19T06:41:26,557 Instead, use pypa/build, pypa/installer or other 2023-09-19T06:41:26,558 standards-based tools. 2023-09-19T06:41:26,559 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-09-19T06:41:26,560 ******************************************************************************** 2023-09-19T06:41:26,561 !! 2023-09-19T06:41:26,561 self.initialize_options() 2023-09-19T06:41:26,580 installing to build/bdist.linux-armv7l/wheel 2023-09-19T06:41:26,580 running install 2023-09-19T06:41:26,604 running install_lib 2023-09-19T06:41:26,628 creating build/bdist.linux-armv7l 2023-09-19T06:41:26,628 creating build/bdist.linux-armv7l/wheel 2023-09-19T06:41:26,630 creating build/bdist.linux-armv7l/wheel/SalmonEuAdmix 2023-09-19T06:41:26,631 copying build/lib/SalmonEuAdmix/model.py -> build/bdist.linux-armv7l/wheel/SalmonEuAdmix 2023-09-19T06:41:26,633 copying build/lib/SalmonEuAdmix/__init__.py -> build/bdist.linux-armv7l/wheel/SalmonEuAdmix 2023-09-19T06:41:26,635 creating build/bdist.linux-armv7l/wheel/SalmonEuAdmix/data 2023-09-19T06:41:26,636 copying build/lib/SalmonEuAdmix/data/y_scaler_v4 -> build/bdist.linux-armv7l/wheel/SalmonEuAdmix/data 2023-09-19T06:41:26,638 copying build/lib/SalmonEuAdmix/data/unit_test2.ped -> build/bdist.linux-armv7l/wheel/SalmonEuAdmix/data 2023-09-19T06:41:26,641 copying build/lib/SalmonEuAdmix/data/panel_513_data.map -> build/bdist.linux-armv7l/wheel/SalmonEuAdmix/data 2023-09-19T06:41:26,643 copying build/lib/SalmonEuAdmix/data/panel_513_data.ped -> build/bdist.linux-armv7l/wheel/SalmonEuAdmix/data 2023-09-19T06:41:26,646 copying build/lib/SalmonEuAdmix/data/reduced_marker_list.pkl -> build/bdist.linux-armv7l/wheel/SalmonEuAdmix/data 2023-09-19T06:41:26,649 copying build/lib/SalmonEuAdmix/data/unit_test2.map -> build/bdist.linux-armv7l/wheel/SalmonEuAdmix/data 2023-09-19T06:41:26,651 copying build/lib/SalmonEuAdmix/data/panel_301_data.ped -> build/bdist.linux-armv7l/wheel/SalmonEuAdmix/data 2023-09-19T06:41:26,654 copying build/lib/SalmonEuAdmix/data/panel_301_data.map -> build/bdist.linux-armv7l/wheel/SalmonEuAdmix/data 2023-09-19T06:41:26,656 copying build/lib/SalmonEuAdmix/data/SNP_impute_info.pkl -> build/bdist.linux-armv7l/wheel/SalmonEuAdmix/data 2023-09-19T06:41:26,658 copying build/lib/SalmonEuAdmix/data/SNP_major_minor_info.pkl -> build/bdist.linux-armv7l/wheel/SalmonEuAdmix/data 2023-09-19T06:41:26,661 copying build/lib/SalmonEuAdmix/data/X_scaler_v1 -> build/bdist.linux-armv7l/wheel/SalmonEuAdmix/data 2023-09-19T06:41:26,664 copying build/lib/SalmonEuAdmix/data/y_scaler_v1 -> build/bdist.linux-armv7l/wheel/SalmonEuAdmix/data 2023-09-19T06:41:26,666 copying build/lib/SalmonEuAdmix/data/X_scaler_v4 -> build/bdist.linux-armv7l/wheel/SalmonEuAdmix/data 2023-09-19T06:41:26,668 copying build/lib/SalmonEuAdmix/cli.py -> build/bdist.linux-armv7l/wheel/SalmonEuAdmix 2023-09-19T06:41:26,671 copying build/lib/SalmonEuAdmix/encode.py -> build/bdist.linux-armv7l/wheel/SalmonEuAdmix 2023-09-19T06:41:26,673 running install_egg_info 2023-09-19T06:41:26,732 running egg_info 2023-09-19T06:41:26,756 writing SalmonEuAdmix.egg-info/PKG-INFO 2023-09-19T06:41:26,759 writing dependency_links to SalmonEuAdmix.egg-info/dependency_links.txt 2023-09-19T06:41:26,760 writing entry points to SalmonEuAdmix.egg-info/entry_points.txt 2023-09-19T06:41:26,762 writing requirements to SalmonEuAdmix.egg-info/requires.txt 2023-09-19T06:41:26,763 writing top-level names to SalmonEuAdmix.egg-info/top_level.txt 2023-09-19T06:41:26,790 reading manifest file 'SalmonEuAdmix.egg-info/SOURCES.txt' 2023-09-19T06:41:26,792 adding license file 'LICENCE.md' 2023-09-19T06:41:26,794 writing manifest file 'SalmonEuAdmix.egg-info/SOURCES.txt' 2023-09-19T06:41:26,796 Copying SalmonEuAdmix.egg-info to build/bdist.linux-armv7l/wheel/SalmonEuAdmix-1.0.3-py3.11.egg-info 2023-09-19T06:41:26,807 running install_scripts 2023-09-19T06:41:26,826 creating build/bdist.linux-armv7l/wheel/SalmonEuAdmix-1.0.3.dist-info/WHEEL 2023-09-19T06:41:26,828 creating '/tmp/pip-wheel-yqojkvzm/SalmonEuAdmix-1.0.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-09-19T06:41:26,830 adding 'SalmonEuAdmix/__init__.py' 2023-09-19T06:41:26,832 adding 'SalmonEuAdmix/cli.py' 2023-09-19T06:41:26,834 adding 'SalmonEuAdmix/encode.py' 2023-09-19T06:41:26,836 adding 'SalmonEuAdmix/model.py' 2023-09-19T06:41:26,838 adding 'SalmonEuAdmix/data/SNP_impute_info.pkl' 2023-09-19T06:41:26,840 adding 'SalmonEuAdmix/data/SNP_major_minor_info.pkl' 2023-09-19T06:41:26,843 adding 'SalmonEuAdmix/data/X_scaler_v1' 2023-09-19T06:41:26,845 adding 'SalmonEuAdmix/data/X_scaler_v4' 2023-09-19T06:41:26,847 adding 'SalmonEuAdmix/data/panel_301_data.map' 2023-09-19T06:41:26,850 adding 'SalmonEuAdmix/data/panel_301_data.ped' 2023-09-19T06:41:26,852 adding 'SalmonEuAdmix/data/panel_513_data.map' 2023-09-19T06:41:26,859 adding 'SalmonEuAdmix/data/panel_513_data.ped' 2023-09-19T06:41:26,861 adding 'SalmonEuAdmix/data/reduced_marker_list.pkl' 2023-09-19T06:41:26,864 adding 'SalmonEuAdmix/data/unit_test2.map' 2023-09-19T06:41:26,870 adding 'SalmonEuAdmix/data/unit_test2.ped' 2023-09-19T06:41:26,871 adding 'SalmonEuAdmix/data/y_scaler_v1' 2023-09-19T06:41:26,873 adding 'SalmonEuAdmix/data/y_scaler_v4' 2023-09-19T06:41:26,880 adding 'SalmonEuAdmix-1.0.3.dist-info/LICENCE.md' 2023-09-19T06:41:26,881 adding 'SalmonEuAdmix-1.0.3.dist-info/METADATA' 2023-09-19T06:41:26,882 adding 'SalmonEuAdmix-1.0.3.dist-info/WHEEL' 2023-09-19T06:41:26,883 adding 'SalmonEuAdmix-1.0.3.dist-info/entry_points.txt' 2023-09-19T06:41:26,884 adding 'SalmonEuAdmix-1.0.3.dist-info/top_level.txt' 2023-09-19T06:41:26,885 adding 'SalmonEuAdmix-1.0.3.dist-info/RECORD' 2023-09-19T06:41:26,887 removing build/bdist.linux-armv7l/wheel 2023-09-19T06:41:27,003 Building wheel for salmoneuadmix (setup.py): finished with status 'done' 2023-09-19T06:41:27,007 Created wheel for salmoneuadmix: filename=SalmonEuAdmix-1.0.3-py3-none-any.whl size=74217 sha256=635bfd54617bba15e0e02809017aecf85756867136d3601d057cd6f0818cfb9d 2023-09-19T06:41:27,008 Stored in directory: /tmp/pip-ephem-wheel-cache-j8o4_3n7/wheels/4b/cd/69/872993177be4f851117fed73fd61713b976f9c5f38f6a8d08d 2023-09-19T06:41:27,019 Successfully built salmoneuadmix 2023-09-19T06:41:27,024 Removed build tracker: '/tmp/pip-build-tracker-psj6wa40'