2023-09-20T21:02:01,733 Created temporary directory: /tmp/pip-build-tracker-6u4bjl12 2023-09-20T21:02:01,734 Initialized build tracking at /tmp/pip-build-tracker-6u4bjl12 2023-09-20T21:02:01,735 Created build tracker: /tmp/pip-build-tracker-6u4bjl12 2023-09-20T21:02:01,735 Entered build tracker: /tmp/pip-build-tracker-6u4bjl12 2023-09-20T21:02:01,736 Created temporary directory: /tmp/pip-wheel-mtvg0d3c 2023-09-20T21:02:01,739 Created temporary directory: /tmp/pip-ephem-wheel-cache-ef1zt_mg 2023-09-20T21:02:01,762 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-20T21:02:01,766 2 location(s) to search for versions of scikit-bio: 2023-09-20T21:02:01,766 * https://pypi.org/simple/scikit-bio/ 2023-09-20T21:02:01,766 * https://www.piwheels.org/simple/scikit-bio/ 2023-09-20T21:02:01,767 Fetching project page and analyzing links: https://pypi.org/simple/scikit-bio/ 2023-09-20T21:02:01,768 Getting page https://pypi.org/simple/scikit-bio/ 2023-09-20T21:02:01,769 Found index url https://pypi.org/simple/ 2023-09-20T21:02:01,989 Fetched page https://pypi.org/simple/scikit-bio/ as application/vnd.pypi.simple.v1+json 2023-09-20T21:02:01,994 Found link https://files.pythonhosted.org/packages/e0/4f/9e53704ce04a5e60511449a5e16511c6e20219ed0932e4aeea84fe2189fd/scikit-bio-0.1.0.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.0 2023-09-20T21:02:01,995 Found link https://files.pythonhosted.org/packages/91/8b/ea20137d6b84808b3dd6a7ad162dd80dcda40934428824d1ce87b8983b81/scikit-bio-0.1.1.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.1 2023-09-20T21:02:01,996 Found link https://files.pythonhosted.org/packages/5f/6e/adc704fa25e9789bfc17882261010320ea9c6148d9d2e28083a5e57a3e9f/scikit-bio-0.1.2.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.2 2023-09-20T21:02:01,996 Found link https://files.pythonhosted.org/packages/da/03/82ad31dc38265135b432b34b2cec0680fee841e0bdc5f90b5a4596beafb3/scikit-bio-0.1.3.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.3 2023-09-20T21:02:01,997 Found link https://files.pythonhosted.org/packages/b0/70/92b5bb9fc66ef4d54e1bf67626bda04a41ed723b5eb25c018154728e2b26/scikit-bio-0.1.4.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.4 2023-09-20T21:02:01,998 Found link https://files.pythonhosted.org/packages/5f/21/c6879978a222a04f1ac1b0a535a18111c84367ee22a5c93e6c0503f57e01/scikit-bio-0.1.5.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.5 2023-09-20T21:02:01,998 Found link https://files.pythonhosted.org/packages/99/76/0c0bd2d6d9973a001477535c68772ff35f543324e36afe21c4f7d6721327/scikit-bio-0.2.0.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.2.0 2023-09-20T21:02:01,999 Found link https://files.pythonhosted.org/packages/7b/74/77cf9b45ea0df4d3b8c3adcbd6f59e0b0603d1a3a2fed1b1ae6365232ac6/scikit-bio-0.2.1.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.2.1 2023-09-20T21:02:02,000 Found link https://files.pythonhosted.org/packages/bd/0a/6a5906fd53616c0763c5f445b5dc42907720f344318a1f07627986d22f33/scikit-bio-0.2.2.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.2.2 2023-09-20T21:02:02,001 Found link https://files.pythonhosted.org/packages/8e/70/559566c9dbde9435360058c420a819b4e8ce844f7ebd94daec9836f4be24/scikit-bio-0.2.3.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.2.3 2023-09-20T21:02:02,001 Found link https://files.pythonhosted.org/packages/d9/cb/c4684ce5c521de96411c2b88255feb45077e0b2df7ebbdf946abe5caaf25/scikit-bio-0.4.0.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.4.0 2023-09-20T21:02:02,002 Found link https://files.pythonhosted.org/packages/12/02/81edd2941d892cb4d0144be716c341b9a6fd255046c08d1b7bd6c70a0112/scikit-bio-0.4.1.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.4.1 2023-09-20T21:02:02,002 Found link https://files.pythonhosted.org/packages/a8/87/23635a6a9b6a1abdf78ccfc1e71929570be4c4ab4004eab66da9dd4a5c6a/scikit-bio-0.4.2.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.4.2 2023-09-20T21:02:02,003 Found link https://files.pythonhosted.org/packages/95/60/f4c269a6dfaf9d027adba6a81497e5d238cf5e604f53206b4ea50ed1145f/scikit-bio-0.5.0.zip (from https://pypi.org/simple/scikit-bio/), version: 0.5.0 2023-09-20T21:02:02,004 Found link https://files.pythonhosted.org/packages/e5/7e/cf03a7e53da18ae6a847894384838e9a36a98b48909a3f347ff6077c7304/scikit-bio-0.5.1.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.1 2023-09-20T21:02:02,004 Found link https://files.pythonhosted.org/packages/98/ee/08995b89efccf2bf8a0307a1eb7825dceb199e64a3db24cec832c0ca0baf/scikit-bio-0.5.2.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.2 2023-09-20T21:02:02,005 Found link https://files.pythonhosted.org/packages/39/07/4e3bcf7a7c254154ac445684d5f646ccc4a6ce6bfc3b0cc8030136215b8a/scikit-bio-0.5.3.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.3 2023-09-20T21:02:02,006 Found link https://files.pythonhosted.org/packages/ed/e0/3ae790c5c260be0968a6d41108e35f327365e5460c9d8672714fd136817d/scikit-bio-0.5.4.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.4 2023-09-20T21:02:02,006 Found link https://files.pythonhosted.org/packages/2d/ff/3a909ae8c212305846f7e87f86f3902408b55b958eccedf5d4349e76c671/scikit-bio-0.5.5.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.5 2023-09-20T21:02:02,007 Found link https://files.pythonhosted.org/packages/66/b0/054ef21e024d24422882958072973cd192b492e004a3ce4e9614ef173d9b/scikit-bio-0.5.6.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.6 2023-09-20T21:02:02,007 Found link https://files.pythonhosted.org/packages/8c/a4/6ec875ba9a56f7705529aecc745ca3eaee6d90b87cd103281be7a032b412/scikit-bio-0.5.7.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.7 2023-09-20T21:02:02,008 Found link https://files.pythonhosted.org/packages/f3/5b/7ae2c3cca0cee7825a24b9c68d7ba0893ef816c41e43aeccf9ca3bc63cb7/scikit-bio-0.5.8.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.8 2023-09-20T21:02:02,008 Found link https://files.pythonhosted.org/packages/0b/ff/c3ed458b9c7b1cfdaadfcab2e015f3e21672bd57a8e216a319442e4c8a1b/scikit-bio-0.5.9.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.9 2023-09-20T21:02:02,009 Fetching project page and analyzing links: https://www.piwheels.org/simple/scikit-bio/ 2023-09-20T21:02:02,010 Getting page https://www.piwheels.org/simple/scikit-bio/ 2023-09-20T21:02:02,011 Found index url https://www.piwheels.org/simple/ 2023-09-20T21:02:02,298 Fetched page https://www.piwheels.org/simple/scikit-bio/ as text/html 2023-09-20T21:02:02,305 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.9-cp39-cp39-linux_armv7l.whl#sha256=b248a90a5ed7214267889ad197585aa84aeb5ec25dd9bb63ddc064cbda00a971 (from https://www.piwheels.org/simple/scikit-bio/) 2023-09-20T21:02:02,305 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.9-cp39-cp39-linux_armv6l.whl#sha256=b248a90a5ed7214267889ad197585aa84aeb5ec25dd9bb63ddc064cbda00a971 (from https://www.piwheels.org/simple/scikit-bio/) 2023-09-20T21:02:02,306 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.9-cp37-cp37m-linux_armv7l.whl#sha256=8fa99b56c44c5c2b18355ef926d00cf7d1d651ab8d0eb367747d3806c4e716dc (from https://www.piwheels.org/simple/scikit-bio/) 2023-09-20T21:02:02,307 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.9-cp37-cp37m-linux_armv6l.whl#sha256=8fa99b56c44c5c2b18355ef926d00cf7d1d651ab8d0eb367747d3806c4e716dc (from https://www.piwheels.org/simple/scikit-bio/) 2023-09-20T21:02:02,308 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.8-cp39-cp39-linux_armv7l.whl#sha256=7692ae74dbd1b55f55796326c6f3ed2e17028eee9e09eecb0f58d7073e534c52 (from https://www.piwheels.org/simple/scikit-bio/) 2023-09-20T21:02:02,308 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.8-cp39-cp39-linux_armv6l.whl#sha256=7692ae74dbd1b55f55796326c6f3ed2e17028eee9e09eecb0f58d7073e534c52 (from https://www.piwheels.org/simple/scikit-bio/) 2023-09-20T21:02:02,309 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.8-cp37-cp37m-linux_armv7l.whl#sha256=6569ab2696b41bc41ae4e94547d0acd136512dab7753942df12b06931a5ed810 (from https://www.piwheels.org/simple/scikit-bio/) 2023-09-20T21:02:02,310 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.8-cp37-cp37m-linux_armv6l.whl#sha256=6569ab2696b41bc41ae4e94547d0acd136512dab7753942df12b06931a5ed810 (from https://www.piwheels.org/simple/scikit-bio/) 2023-09-20T21:02:02,311 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp39-cp39-linux_armv7l.whl#sha256=1fc89935500ef73303aef4292735583d83456271b51534e31497a2d5eb2b8d3b (from https://www.piwheels.org/simple/scikit-bio/) 2023-09-20T21:02:02,311 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp39-cp39-linux_armv6l.whl#sha256=1fc89935500ef73303aef4292735583d83456271b51534e31497a2d5eb2b8d3b (from https://www.piwheels.org/simple/scikit-bio/) 2023-09-20T21:02:02,312 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp37-cp37m-linux_armv7l.whl#sha256=fb1f612aaab958a170d467b2c9a6c1c6c2249bce52c095b7d7b7d8cc07c9ce31 (from https://www.piwheels.org/simple/scikit-bio/) 2023-09-20T21:02:02,313 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp37-cp37m-linux_armv6l.whl#sha256=fb1f612aaab958a170d467b2c9a6c1c6c2249bce52c095b7d7b7d8cc07c9ce31 (from https://www.piwheels.org/simple/scikit-bio/) 2023-09-20T21:02:02,313 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp35-cp35m-linux_armv7l.whl#sha256=3527865d97cf75cd55785b872d6e479bc2ee03250f6b71b9cc2d4a819d69c64c (from https://www.piwheels.org/simple/scikit-bio/) 2023-09-20T21:02:02,314 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp35-cp35m-linux_armv6l.whl#sha256=3527865d97cf75cd55785b872d6e479bc2ee03250f6b71b9cc2d4a819d69c64c (from https://www.piwheels.org/simple/scikit-bio/) 2023-09-20T21:02:02,315 Skipping link: not a file: https://www.piwheels.org/simple/scikit-bio/ 2023-09-20T21:02:02,315 Skipping link: not a file: https://pypi.org/simple/scikit-bio/ 2023-09-20T21:02:02,346 Given no hashes to check 1 links for project 'scikit-bio': discarding no candidates 2023-09-20T21:02:02,372 Collecting scikit-bio==0.5.8 2023-09-20T21:02:02,375 Created temporary directory: /tmp/pip-unpack-3o_y47g4 2023-09-20T21:02:02,516 Downloading scikit-bio-0.5.8.tar.gz (3.5 MB) 2023-09-20T21:02:04,311 Added scikit-bio==0.5.8 from https://files.pythonhosted.org/packages/f3/5b/7ae2c3cca0cee7825a24b9c68d7ba0893ef816c41e43aeccf9ca3bc63cb7/scikit-bio-0.5.8.tar.gz to build tracker '/tmp/pip-build-tracker-6u4bjl12' 2023-09-20T21:02:04,317 Created temporary directory: /tmp/pip-build-env-vzp1hduy 2023-09-20T21:02:04,322 Installing build dependencies: started 2023-09-20T21:02:04,323 Running command pip subprocess to install build dependencies 2023-09-20T21:02:05,458 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-09-20T21:02:05,972 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-20T21:02:07,969 Collecting Cython>=0.29.32 2023-09-20T21:02:07,970 Obtaining dependency information for Cython>=0.29.32 from https://files.pythonhosted.org/packages/03/e9/9cc0c4f0d8a566089d096254cd25168a0db02dd047863a7f995d8d3eefa7/Cython-3.0.2-py2.py3-none-any.whl.metadata 2023-09-20T21:02:07,975 Using cached Cython-3.0.2-py2.py3-none-any.whl.metadata (3.1 kB) 2023-09-20T21:02:08,690 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/3a/be/650f9c091ef71cb01d735775d554e068752d3ff63d7943b26316dc401749/numpy-1.21.2.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2023-09-20T21:02:08,698 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/5f/d6/ad58ded26556eaeaa8c971e08b6466f17c4ac4d786cd3d800e26ce59cc01/numpy-1.21.3.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2023-09-20T21:02:08,705 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/fb/48/b0708ebd7718a8933f0d3937513ef8ef2f4f04529f1f66ca86d873043921/numpy-1.21.4.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2023-09-20T21:02:08,712 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/c2/a8/a924a09492bdfee8c2ec3094d0a13f2799800b4fdc9c890738aeeb12c72e/numpy-1.21.5.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2023-09-20T21:02:08,719 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/45/b7/de7b8e67f2232c26af57c205aaad29fe17754f793404f59c8a730c7a191a/numpy-1.21.6.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2023-09-20T21:02:09,091 Collecting numpy>=1.9.2 2023-09-20T21:02:10,016 Using cached https://www.piwheels.org/simple/numpy/numpy-1.25.2-cp311-cp311-linux_armv7l.whl (12.5 MB) 2023-09-20T21:02:11,601 Collecting setuptools 2023-09-20T21:02:11,603 Obtaining dependency information for setuptools from https://files.pythonhosted.org/packages/bb/26/7945080113158354380a12ce26873dd6c1ebd88d47f5bc24e2c5bb38c16a/setuptools-68.2.2-py3-none-any.whl.metadata 2023-09-20T21:02:11,608 Using cached setuptools-68.2.2-py3-none-any.whl.metadata (6.3 kB) 2023-09-20T21:02:11,811 Collecting wheel 2023-09-20T21:02:11,826 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB) 2023-09-20T21:02:12,082 Using cached Cython-3.0.2-py2.py3-none-any.whl (1.2 MB) 2023-09-20T21:02:12,124 Using cached setuptools-68.2.2-py3-none-any.whl (807 kB) 2023-09-20T21:02:14,565 Installing collected packages: wheel, setuptools, numpy, Cython 2023-09-20T21:02:14,783 Creating /tmp/pip-build-env-vzp1hduy/overlay/local/bin 2023-09-20T21:02:14,785 changing mode of /tmp/pip-build-env-vzp1hduy/overlay/local/bin/wheel to 755 2023-09-20T21:02:25,716 changing mode of /tmp/pip-build-env-vzp1hduy/overlay/local/bin/f2py to 755 2023-09-20T21:02:25,718 changing mode of /tmp/pip-build-env-vzp1hduy/overlay/local/bin/f2py3 to 755 2023-09-20T21:02:25,720 changing mode of /tmp/pip-build-env-vzp1hduy/overlay/local/bin/f2py3.11 to 755 2023-09-20T21:02:28,457 changing mode of /tmp/pip-build-env-vzp1hduy/overlay/local/bin/cygdb to 755 2023-09-20T21:02:28,459 changing mode of /tmp/pip-build-env-vzp1hduy/overlay/local/bin/cython to 755 2023-09-20T21:02:28,461 changing mode of /tmp/pip-build-env-vzp1hduy/overlay/local/bin/cythonize to 755 2023-09-20T21:02:28,493 Successfully installed Cython-3.0.2 numpy-1.25.2 setuptools-68.2.2 wheel-0.41.2 2023-09-20T21:02:29,178 Installing build dependencies: finished with status 'done' 2023-09-20T21:02:29,192 Getting requirements to build wheel: started 2023-09-20T21:02:29,193 Running command Getting requirements to build wheel 2023-09-20T21:02:29,654 Traceback (most recent call last): 2023-09-20T21:02:29,654 File "/tmp/pip-build-env-vzp1hduy/overlay/local/lib/python3.11/dist-packages/numpy/core/__init__.py", line 23, in 2023-09-20T21:02:29,655 from . import multiarray 2023-09-20T21:02:29,655 File "/tmp/pip-build-env-vzp1hduy/overlay/local/lib/python3.11/dist-packages/numpy/core/multiarray.py", line 10, in 2023-09-20T21:02:29,656 from . import overrides 2023-09-20T21:02:29,657 File "/tmp/pip-build-env-vzp1hduy/overlay/local/lib/python3.11/dist-packages/numpy/core/overrides.py", line 8, in 2023-09-20T21:02:29,657 from numpy.core._multiarray_umath import ( 2023-09-20T21:02:29,658 ImportError: libopenblas.so.0: cannot open shared object file: No such file or directory 2023-09-20T21:02:29,659 During handling of the above exception, another exception occurred: 2023-09-20T21:02:29,660 Traceback (most recent call last): 2023-09-20T21:02:29,660 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 353, in 2023-09-20T21:02:29,661 main() 2023-09-20T21:02:29,661 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 335, in main 2023-09-20T21:02:29,662 json_out['return_val'] = hook(**hook_input['kwargs']) 2023-09-20T21:02:29,662 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-20T21:02:29,663 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 118, in get_requires_for_build_wheel 2023-09-20T21:02:29,664 return hook(config_settings) 2023-09-20T21:02:29,665 ^^^^^^^^^^^^^^^^^^^^^ 2023-09-20T21:02:29,665 File "/tmp/pip-build-env-vzp1hduy/overlay/local/lib/python3.11/dist-packages/setuptools/build_meta.py", line 355, in get_requires_for_build_wheel 2023-09-20T21:02:29,666 return self._get_build_requires(config_settings, requirements=['wheel']) 2023-09-20T21:02:29,667 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-20T21:02:29,667 File "/tmp/pip-build-env-vzp1hduy/overlay/local/lib/python3.11/dist-packages/setuptools/build_meta.py", line 325, in _get_build_requires 2023-09-20T21:02:29,668 self.run_setup() 2023-09-20T21:02:29,669 File "/tmp/pip-build-env-vzp1hduy/overlay/local/lib/python3.11/dist-packages/setuptools/build_meta.py", line 507, in run_setup 2023-09-20T21:02:29,670 super(_BuildMetaLegacyBackend, self).run_setup(setup_script=setup_script) 2023-09-20T21:02:29,671 File "/tmp/pip-build-env-vzp1hduy/overlay/local/lib/python3.11/dist-packages/setuptools/build_meta.py", line 341, in run_setup 2023-09-20T21:02:29,671 exec(code, locals()) 2023-09-20T21:02:29,672 File "", line 22, in 2023-09-20T21:02:29,673 File "/tmp/pip-build-env-vzp1hduy/overlay/local/lib/python3.11/dist-packages/numpy/__init__.py", line 139, in 2023-09-20T21:02:29,674 from . import core 2023-09-20T21:02:29,675 File "/tmp/pip-build-env-vzp1hduy/overlay/local/lib/python3.11/dist-packages/numpy/core/__init__.py", line 49, in 2023-09-20T21:02:29,676 raise ImportError(msg) 2023-09-20T21:02:29,677 ImportError: 2023-09-20T21:02:29,678 IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 2023-09-20T21:02:29,680 Importing the numpy C-extensions failed. This error can happen for 2023-09-20T21:02:29,681 many reasons, often due to issues with your setup or how NumPy was 2023-09-20T21:02:29,682 installed. 2023-09-20T21:02:29,683 We have compiled some common reasons and troubleshooting tips at: 2023-09-20T21:02:29,685 https://numpy.org/devdocs/user/troubleshooting-importerror.html 2023-09-20T21:02:29,687 Please note and check the following: 2023-09-20T21:02:29,688 * The Python version is: Python3.11 from "/usr/bin/python3" 2023-09-20T21:02:29,689 * The NumPy version is: "1.25.2" 2023-09-20T21:02:29,691 and make sure that they are the versions you expect. 2023-09-20T21:02:29,692 Please carefully study the documentation linked above for further help. 2023-09-20T21:02:29,693 Original error was: libopenblas.so.0: cannot open shared object file: No such file or directory 2023-09-20T21:02:29,737 ERROR: [present-rich] Getting requirements to build wheel exited with 1 2023-09-20T21:02:29,749 [bold magenta]full command[/]: [blue]/usr/bin/python3 /usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py get_requires_for_build_wheel /tmp/tmpax_32u2r[/] 2023-09-20T21:02:29,750 [bold magenta]cwd[/]: /tmp/pip-wheel-mtvg0d3c/scikit-bio_4b96a57cb7b6429a83edd32a5d14d870 2023-09-20T21:02:29,751 Getting requirements to build wheel: finished with status 'error' 2023-09-20T21:02:29,753 ERROR: [present-rich] Getting requirements to build wheel exited with 1 2023-09-20T21:02:29,758 Exception information: 2023-09-20T21:02:29,758 Traceback (most recent call last): 2023-09-20T21:02:29,758 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper 2023-09-20T21:02:29,758 status = run_func(*args) 2023-09-20T21:02:29,758 ^^^^^^^^^^^^^^^ 2023-09-20T21:02:29,758 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper 2023-09-20T21:02:29,758 return func(self, options, args) 2023-09-20T21:02:29,758 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-20T21:02:29,758 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 147, in run 2023-09-20T21:02:29,758 requirement_set = resolver.resolve(reqs, check_supported_wheels=True) 2023-09-20T21:02:29,758 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-20T21:02:29,758 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 92, in resolve 2023-09-20T21:02:29,758 result = self._result = resolver.resolve( 2023-09-20T21:02:29,758 ^^^^^^^^^^^^^^^^^ 2023-09-20T21:02:29,758 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 546, in resolve 2023-09-20T21:02:29,758 state = resolution.resolve(requirements, max_rounds=max_rounds) 2023-09-20T21:02:29,758 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-20T21:02:29,758 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 397, in resolve 2023-09-20T21:02:29,758 self._add_to_criteria(self.state.criteria, r, parent=None) 2023-09-20T21:02:29,758 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria 2023-09-20T21:02:29,758 if not criterion.candidates: 2023-09-20T21:02:29,758 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/structs.py", line 156, in __bool__ 2023-09-20T21:02:29,758 return bool(self._sequence) 2023-09-20T21:02:29,758 ^^^^^^^^^^^^^^^^^^^^ 2023-09-20T21:02:29,758 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__ 2023-09-20T21:02:29,758 return any(self) 2023-09-20T21:02:29,758 ^^^^^^^^^ 2023-09-20T21:02:29,758 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in 2023-09-20T21:02:29,758 return (c for c in iterator if id(c) not in self._incompatible_ids) 2023-09-20T21:02:29,758 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-20T21:02:29,758 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built 2023-09-20T21:02:29,758 candidate = func() 2023-09-20T21:02:29,758 ^^^^^^ 2023-09-20T21:02:29,758 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 206, in _make_candidate_from_link 2023-09-20T21:02:29,758 self._link_candidate_cache[link] = LinkCandidate( 2023-09-20T21:02:29,758 ^^^^^^^^^^^^^^ 2023-09-20T21:02:29,758 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 293, in __init__ 2023-09-20T21:02:29,758 super().__init__( 2023-09-20T21:02:29,758 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 156, in __init__ 2023-09-20T21:02:29,758 self.dist = self._prepare() 2023-09-20T21:02:29,758 ^^^^^^^^^^^^^^^ 2023-09-20T21:02:29,758 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 225, in _prepare 2023-09-20T21:02:29,758 dist = self._prepare_distribution() 2023-09-20T21:02:29,758 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-20T21:02:29,758 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 304, in _prepare_distribution 2023-09-20T21:02:29,758 return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True) 2023-09-20T21:02:29,758 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-20T21:02:29,758 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 538, in prepare_linked_requirement 2023-09-20T21:02:29,758 return self._prepare_linked_requirement(req, parallel_builds) 2023-09-20T21:02:29,758 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-20T21:02:29,758 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 653, in _prepare_linked_requirement 2023-09-20T21:02:29,758 dist = _get_prepared_distribution( 2023-09-20T21:02:29,758 ^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-20T21:02:29,758 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 69, in _get_prepared_distribution 2023-09-20T21:02:29,758 abstract_dist.prepare_distribution_metadata( 2023-09-20T21:02:29,758 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/distributions/sdist.py", line 48, in prepare_distribution_metadata 2023-09-20T21:02:29,758 self._install_build_reqs(finder) 2023-09-20T21:02:29,758 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/distributions/sdist.py", line 118, in _install_build_reqs 2023-09-20T21:02:29,758 build_reqs = self._get_build_requires_wheel() 2023-09-20T21:02:29,758 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-20T21:02:29,758 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/distributions/sdist.py", line 95, in _get_build_requires_wheel 2023-09-20T21:02:29,758 return backend.get_requires_for_build_wheel() 2023-09-20T21:02:29,758 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-20T21:02:29,758 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/utils/misc.py", line 697, in get_requires_for_build_wheel 2023-09-20T21:02:29,758 return super().get_requires_for_build_wheel(config_settings=cs) 2023-09-20T21:02:29,758 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-20T21:02:29,758 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_impl.py", line 166, in get_requires_for_build_wheel 2023-09-20T21:02:29,758 return self._call_hook('get_requires_for_build_wheel', { 2023-09-20T21:02:29,758 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-20T21:02:29,758 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_impl.py", line 311, in _call_hook 2023-09-20T21:02:29,758 self._subprocess_runner( 2023-09-20T21:02:29,758 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/utils/subprocess.py", line 252, in runner 2023-09-20T21:02:29,758 call_subprocess( 2023-09-20T21:02:29,758 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess 2023-09-20T21:02:29,758 raise error 2023-09-20T21:02:29,758 pip._internal.exceptions.InstallationSubprocessError: Getting requirements to build wheel exited with 1 2023-09-20T21:02:29,770 Removed scikit-bio==0.5.8 from https://files.pythonhosted.org/packages/f3/5b/7ae2c3cca0cee7825a24b9c68d7ba0893ef816c41e43aeccf9ca3bc63cb7/scikit-bio-0.5.8.tar.gz from build tracker '/tmp/pip-build-tracker-6u4bjl12' 2023-09-20T21:02:29,771 Removed build tracker: '/tmp/pip-build-tracker-6u4bjl12'