2023-09-20T22:07:51,602 Created temporary directory: /tmp/pip-build-tracker-eq7zr8_6 2023-09-20T22:07:51,603 Initialized build tracking at /tmp/pip-build-tracker-eq7zr8_6 2023-09-20T22:07:51,603 Created build tracker: /tmp/pip-build-tracker-eq7zr8_6 2023-09-20T22:07:51,604 Entered build tracker: /tmp/pip-build-tracker-eq7zr8_6 2023-09-20T22:07:51,605 Created temporary directory: /tmp/pip-wheel-k5gabh2h 2023-09-20T22:07:51,608 Created temporary directory: /tmp/pip-ephem-wheel-cache-nogyyu45 2023-09-20T22:07:51,629 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-20T22:07:51,633 2 location(s) to search for versions of genomedata: 2023-09-20T22:07:51,633 * https://pypi.org/simple/genomedata/ 2023-09-20T22:07:51,633 * https://www.piwheels.org/simple/genomedata/ 2023-09-20T22:07:51,634 Fetching project page and analyzing links: https://pypi.org/simple/genomedata/ 2023-09-20T22:07:51,634 Getting page https://pypi.org/simple/genomedata/ 2023-09-20T22:07:51,636 Found index url https://pypi.org/simple/ 2023-09-20T22:07:51,968 Fetched page https://pypi.org/simple/genomedata/ as application/vnd.pypi.simple.v1+json 2023-09-20T22:07:51,976 Found link https://files.pythonhosted.org/packages/9f/d0/c09cd33ccd955e3585dd76eb00c0aa755f188ae653e0dd92eea33ab8d07b/genomedata-0.1.4.tar.gz (from https://pypi.org/simple/genomedata/), version: 0.1.4 2023-09-20T22:07:51,977 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/9b/fa/f10624ccb807792a8070ed943c3603ae6adea70a6ea5c47ca191e54cf7e8/genomedata-0.1.5-py2.5.egg (from https://pypi.org/simple/genomedata/) 2023-09-20T22:07:51,977 Found link https://files.pythonhosted.org/packages/d1/bd/64c3331f416dda32d38ca8f4c232926d0e8b2fd1ddf9c7827dd2036c19a9/genomedata-0.1.5.tar.gz (from https://pypi.org/simple/genomedata/), version: 0.1.5 2023-09-20T22:07:51,978 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/ee/e2/c888d35113765be0c1083eebe734a4b743741c9eeb758ba1ceae4be03965/genomedata-0.1.6-py2.5.egg (from https://pypi.org/simple/genomedata/) 2023-09-20T22:07:51,978 Found link https://files.pythonhosted.org/packages/db/3c/3a9f9441a2d9b07eaf46a3bc8592fc5c00705ab047fff6d1bf83738187c2/genomedata-0.1.6.tar.gz (from https://pypi.org/simple/genomedata/), version: 0.1.6 2023-09-20T22:07:51,979 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/e6/50/9278c9bb1197cf4890aba00e2694452b9543009717d6ef0b7a0abc331f73/genomedata-1.0.0-py2.5.egg (from https://pypi.org/simple/genomedata/) 2023-09-20T22:07:51,980 Found link https://files.pythonhosted.org/packages/53/7b/952cb445c3f19ff3fcc5858d1aadd6b7f2a2bf1aedaf3c69f09384008bc7/genomedata-1.0.0.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.0.0 2023-09-20T22:07:51,980 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/e3/e5/715b60d2ccd6e1b09dc00013885ddc91d0d00a13abba13d0b4ae5d0e655f/genomedata-1.0.1-py2.5.egg (from https://pypi.org/simple/genomedata/) 2023-09-20T22:07:51,981 Found link https://files.pythonhosted.org/packages/ca/6f/029e8fa74efe34958ab94c1dbe09693a16f0dbd3ff9277a26c1e2e4bc06d/genomedata-1.0.1.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.0.1 2023-09-20T22:07:51,982 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/02/23/b7f1ae2c30e6c8aa9a53205a090851feea5a09298a268d6aa4315b60068b/genomedata-1.1.0-py2.5.egg (from https://pypi.org/simple/genomedata/) 2023-09-20T22:07:51,982 Found link https://files.pythonhosted.org/packages/d3/a5/276928eb1ede8c99467d8dabb75498304a2262e030fea4b8bd217f0c047a/genomedata-1.1.0.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.1.0 2023-09-20T22:07:51,983 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/3c/3a/186c602e584cfc0c76b13b0bcf554e82648aae6f8e0a6836df258ea23418/genomedata-1.1.1-py2.5.egg (from https://pypi.org/simple/genomedata/) 2023-09-20T22:07:51,983 Found link https://files.pythonhosted.org/packages/41/be/56ca09d389d8fa4406dde7a9b32d9953fb9ba78d02e0fc640b4946503696/genomedata-1.1.1.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.1.1 2023-09-20T22:07:51,984 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/cb/15/eccac8c39dcd9c48dafd5a8ad77f77e88a2707e527eb765df112ecd59f3b/genomedata-1.2.0-py2.5.egg (from https://pypi.org/simple/genomedata/) 2023-09-20T22:07:51,985 Found link https://files.pythonhosted.org/packages/ee/b4/9f05a26671745bf9bb0c657b65eb3c6973a5adea7c8172c40efcd7bee6d8/genomedata-1.2.0.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.2.0 2023-09-20T22:07:51,986 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/93/5c/7a96b02d1a0d7c33b43710d321371d3fd748059ae98d57c07863944f0b2b/genomedata-1.2.1-py2.5.egg (from https://pypi.org/simple/genomedata/) 2023-09-20T22:07:51,986 Found link https://files.pythonhosted.org/packages/84/4d/75af402b72884de9a8f4a7b04bc2ecf367c00286fac827f83ff840f926b6/genomedata-1.2.1.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.2.1 2023-09-20T22:07:51,987 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/9a/f8/fe1ea521ccf7bed51cbc506eee09bde20cd7a13be074a66bf260c9ca00c2/genomedata-1.2.2-py2.5.egg (from https://pypi.org/simple/genomedata/) 2023-09-20T22:07:51,987 Found link https://files.pythonhosted.org/packages/29/2f/2daf3f2c913c2427c5f72f8bc6daa800ddb6854d923488ec03b05096ace6/genomedata-1.2.2.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.2.2 2023-09-20T22:07:51,988 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/9d/5f/10e8c1950fb2444d9977d8e063b088e23e027264b8060b671a76b371e6c2/genomedata-1.3.2-py2.7.egg (from https://pypi.org/simple/genomedata/) 2023-09-20T22:07:51,988 Found link https://files.pythonhosted.org/packages/c2/ff/01de9d35322f254787541ae050d6805dda9bb6d57fbfd57a1f0ce1996405/genomedata-1.3.2.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.3.2 2023-09-20T22:07:51,989 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/5d/e7/b8880f2b7c14186cd3c608dd2164ed854624899458bad7ed2a5ffe73a41d/genomedata-1.3.3-py2.7.egg (from https://pypi.org/simple/genomedata/) 2023-09-20T22:07:51,989 Found link https://files.pythonhosted.org/packages/8a/fe/6589545018763ed382eef6206bbedd924100d9b3795ad63b982f1accb030/genomedata-1.3.3.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.3.3 2023-09-20T22:07:51,990 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/f9/60/7a38a31a5f456347baad86b9fc3ff72573b974711bee55be7fb571209991/genomedata-1.3.4-py2.7.egg (from https://pypi.org/simple/genomedata/) 2023-09-20T22:07:51,991 Found link https://files.pythonhosted.org/packages/97/2c/ed8252cf78fed9a0b83bcc3e5ad203502994e1ee4498d9323eb06a37c76e/genomedata-1.3.4.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.3.4 2023-09-20T22:07:51,991 Found link https://files.pythonhosted.org/packages/ae/c8/504b3674a150128e61f5cd075900cc2139e0ac48dabdb70ddf314fbe8424/genomedata-1.3.5.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.3.5 2023-09-20T22:07:51,992 Found link https://files.pythonhosted.org/packages/cd/3a/a466d62a79ccc0926f32c9998f712c14140a0593fc9a487504b202dd18bd/genomedata-1.3.6.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.3.6 2023-09-20T22:07:51,993 Found link https://files.pythonhosted.org/packages/8d/ab/60c0ba4affa11f2b2a413aa39956bc79707ef6b6fa9b9712e2d1d412442b/genomedata-1.4.0.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.4.0 2023-09-20T22:07:51,993 Found link https://files.pythonhosted.org/packages/53/1f/2e267e7607ac3a8e85e79238139fc4c0aa66c714ec2c51ed30422790ca45/genomedata-1.4.1.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.4.1 2023-09-20T22:07:51,994 Found link https://files.pythonhosted.org/packages/52/e0/c22e9b44a897472cf7c315d41ca50b1454ea7e650cda88326f55682ac328/genomedata-1.4.2.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.4.2 2023-09-20T22:07:51,995 Found link https://files.pythonhosted.org/packages/a4/fb/5f226c2d1a7b0c30155ef1bc766a57a37b679638eca9b03af587c266932d/genomedata-1.4.3.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.4.3 2023-09-20T22:07:51,996 Found link https://files.pythonhosted.org/packages/ae/a8/095d15019a28d370b0f81a5adb289828dee17b5ac5e069518024526996f6/genomedata-1.4.4.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.4.4 2023-09-20T22:07:51,996 Found link https://files.pythonhosted.org/packages/3b/a2/690e07a7b11ae2f1892f8858a19b725e7477e801da69074eb84fdee664f2/genomedata-1.5.0.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.5.0 2023-09-20T22:07:51,997 Skipping link: No binaries permitted for genomedata: https://files.pythonhosted.org/packages/83/d3/e0d08c4c6d9b81a8f2de3d31004fd175e1adf8b7bdd1dfa97181559b6785/genomedata-1.6.0-cp37-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/genomedata/) (requires-python:>=3.7) 2023-09-20T22:07:51,998 Found link https://files.pythonhosted.org/packages/c8/3e/5c129fe3741973f82237960de335321215ffdb52fa6408e2a0485e1f8540/genomedata-1.6.0.tar.gz (from https://pypi.org/simple/genomedata/) (requires-python:>=3.7), version: 1.6.0 2023-09-20T22:07:51,998 Skipping link: No binaries permitted for genomedata: https://files.pythonhosted.org/packages/49/95/a93e72f833d33b8172c84ee33755fc7436a5a24fb2d6d5cc1c01d2755d93/genomedata-1.7.0-cp37-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/genomedata/) (requires-python:>=3.7) 2023-09-20T22:07:51,999 Found link https://files.pythonhosted.org/packages/fa/89/7fceac8d18f037b3a9ad34bb0e77f2b50fbac68ae41c2841c3a12ab38abb/genomedata-1.7.0.tar.gz (from https://pypi.org/simple/genomedata/) (requires-python:>=3.7), version: 1.7.0 2023-09-20T22:07:51,999 Skipping link: No binaries permitted for genomedata: https://files.pythonhosted.org/packages/86/8d/978aac04cc015d144c15972a6e975a4796fb5d240d5fc3fbb6578e0815e3/genomedata-1.7.1-cp37-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/genomedata/) (requires-python:>=3.7) 2023-09-20T22:07:52,000 Found link https://files.pythonhosted.org/packages/af/5a/0861b58738df9806ddcdd0cbf980b5e6f79f0d1ea9a5950d792f2b21472e/genomedata-1.7.1.tar.gz (from https://pypi.org/simple/genomedata/) (requires-python:>=3.7), version: 1.7.1 2023-09-20T22:07:52,001 Fetching project page and analyzing links: https://www.piwheels.org/simple/genomedata/ 2023-09-20T22:07:52,002 Getting page https://www.piwheels.org/simple/genomedata/ 2023-09-20T22:07:52,003 Found index url https://www.piwheels.org/simple/ 2023-09-20T22:07:52,265 Fetched page https://www.piwheels.org/simple/genomedata/ as text/html 2023-09-20T22:07:52,269 Skipping link: No binaries permitted for genomedata: https://www.piwheels.org/simple/genomedata/genomedata-1.7.1-cp37-abi3-linux_armv7l.whl#sha256=518f4418dd4831c5ae346c16b6e96b8a9e79a011930d9c4fbe98b29de85cc169 (from https://www.piwheels.org/simple/genomedata/) (requires-python:>=3.7) 2023-09-20T22:07:52,269 Skipping link: No binaries permitted for genomedata: https://www.piwheels.org/simple/genomedata/genomedata-1.7.1-cp37-abi3-linux_armv6l.whl#sha256=518f4418dd4831c5ae346c16b6e96b8a9e79a011930d9c4fbe98b29de85cc169 (from https://www.piwheels.org/simple/genomedata/) (requires-python:>=3.7) 2023-09-20T22:07:52,270 Skipping link: No binaries permitted for genomedata: https://www.piwheels.org/simple/genomedata/genomedata-1.7.0-cp37-abi3-linux_armv7l.whl#sha256=00f22834a43ab4f2cf852d5d03e830f3b8bb843b2db0a119ce67c01206647d32 (from https://www.piwheels.org/simple/genomedata/) (requires-python:>=3.7) 2023-09-20T22:07:52,270 Skipping link: No binaries permitted for genomedata: https://www.piwheels.org/simple/genomedata/genomedata-1.7.0-cp37-abi3-linux_armv6l.whl#sha256=00f22834a43ab4f2cf852d5d03e830f3b8bb843b2db0a119ce67c01206647d32 (from https://www.piwheels.org/simple/genomedata/) (requires-python:>=3.7) 2023-09-20T22:07:52,271 Skipping link: No binaries permitted for genomedata: https://www.piwheels.org/simple/genomedata/genomedata-1.6.0-cp37-abi3-linux_armv7l.whl#sha256=30c9dc724233610c7ae03d4190417942f333618976d1dc3f55958192250e777f (from https://www.piwheels.org/simple/genomedata/) (requires-python:>=3.7) 2023-09-20T22:07:52,272 Skipping link: No binaries permitted for genomedata: https://www.piwheels.org/simple/genomedata/genomedata-1.6.0-cp37-abi3-linux_armv6l.whl#sha256=30c9dc724233610c7ae03d4190417942f333618976d1dc3f55958192250e777f (from https://www.piwheels.org/simple/genomedata/) (requires-python:>=3.7) 2023-09-20T22:07:52,272 Skipping link: No binaries permitted for genomedata: https://www.piwheels.org/simple/genomedata/genomedata-1.5.0-py3-none-any.whl#sha256=52913a08eca7171a79a79fb59e558dd3deb2ecfbedd3719f7e79823d6c16e8de (from https://www.piwheels.org/simple/genomedata/) 2023-09-20T22:07:52,273 Skipping link: No binaries permitted for genomedata: https://www.piwheels.org/simple/genomedata/genomedata-1.4.4-py3-none-any.whl#sha256=947997fc388a1793e361a08e235f4dc03b882243eeae4727b245a5b3a49ae466 (from https://www.piwheels.org/simple/genomedata/) 2023-09-20T22:07:52,273 Skipping link: not a file: https://www.piwheels.org/simple/genomedata/ 2023-09-20T22:07:52,274 Skipping link: not a file: https://pypi.org/simple/genomedata/ 2023-09-20T22:07:52,295 Given no hashes to check 1 links for project 'genomedata': discarding no candidates 2023-09-20T22:07:52,312 Collecting genomedata==1.6.0 2023-09-20T22:07:52,315 Created temporary directory: /tmp/pip-unpack-fyv8j3wz 2023-09-20T22:07:52,457 Downloading genomedata-1.6.0.tar.gz (1.9 MB) 2023-09-20T22:07:53,286 Added genomedata==1.6.0 from https://files.pythonhosted.org/packages/c8/3e/5c129fe3741973f82237960de335321215ffdb52fa6408e2a0485e1f8540/genomedata-1.6.0.tar.gz to build tracker '/tmp/pip-build-tracker-eq7zr8_6' 2023-09-20T22:07:53,294 Created temporary directory: /tmp/pip-build-env-8eghbtch 2023-09-20T22:07:53,300 Installing build dependencies: started 2023-09-20T22:07:53,302 Running command pip subprocess to install build dependencies 2023-09-20T22:07:54,683 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-09-20T22:07:55,168 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-20T22:07:56,908 Collecting setuptools 2023-09-20T22:07:56,909 Obtaining dependency information for setuptools from https://files.pythonhosted.org/packages/bb/26/7945080113158354380a12ce26873dd6c1ebd88d47f5bc24e2c5bb38c16a/setuptools-68.2.2-py3-none-any.whl.metadata 2023-09-20T22:07:56,915 Using cached setuptools-68.2.2-py3-none-any.whl.metadata (6.3 kB) 2023-09-20T22:07:57,213 Collecting setuptools-scm 2023-09-20T22:07:57,214 Obtaining dependency information for setuptools-scm from https://files.pythonhosted.org/packages/d4/73/ccf02298d1982cd27c30b3ada350d9952800a38b45bb0cbdb7c7b0110edc/setuptools_scm-8.0.1-py3-none-any.whl.metadata 2023-09-20T22:07:57,219 Using cached setuptools_scm-8.0.1-py3-none-any.whl.metadata (6.1 kB) 2023-09-20T22:07:57,571 Collecting packaging>=20 (from setuptools-scm) 2023-09-20T22:07:57,587 Using cached https://www.piwheels.org/simple/packaging/packaging-23.1-py3-none-any.whl (48 kB) 2023-09-20T22:07:57,623 Using cached setuptools-68.2.2-py3-none-any.whl (807 kB) 2023-09-20T22:07:57,657 Using cached setuptools_scm-8.0.1-py3-none-any.whl (40 kB) 2023-09-20T22:08:00,176 Installing collected packages: setuptools, packaging, setuptools-scm 2023-09-20T22:08:03,380 Successfully installed packaging-23.1 setuptools-68.2.2 setuptools-scm-8.0.1 2023-09-20T22:08:03,901 Installing build dependencies: finished with status 'done' 2023-09-20T22:08:03,905 Getting requirements to build wheel: started 2023-09-20T22:08:03,906 Running command Getting requirements to build wheel 2023-09-20T22:08:04,763 running egg_info 2023-09-20T22:08:04,769 writing genomedata.egg-info/PKG-INFO 2023-09-20T22:08:04,772 writing dependency_links to genomedata.egg-info/dependency_links.txt 2023-09-20T22:08:04,774 writing entry points to genomedata.egg-info/entry_points.txt 2023-09-20T22:08:04,776 writing requirements to genomedata.egg-info/requires.txt 2023-09-20T22:08:04,777 writing top-level names to genomedata.egg-info/top_level.txt 2023-09-20T22:08:04,816 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2023-09-20T22:08:04,820 reading manifest file 'genomedata.egg-info/SOURCES.txt' 2023-09-20T22:08:04,846 reading manifest template 'MANIFEST.in' 2023-09-20T22:08:04,847 no previously-included directories found matching 'Docker' 2023-09-20T22:08:04,848 no previously-included directories found matching '.github' 2023-09-20T22:08:04,848 warning: no previously-included files found matching '.gitignore' 2023-09-20T22:08:04,849 warning: no previously-included files found matching '.readthedocs.yml' 2023-09-20T22:08:04,850 warning: no previously-included files found matching 'environment.yml' 2023-09-20T22:08:04,850 adding license file 'LICENSE' 2023-09-20T22:08:04,857 writing manifest file 'genomedata.egg-info/SOURCES.txt' 2023-09-20T22:08:04,975 Getting requirements to build wheel: finished with status 'done' 2023-09-20T22:08:04,986 Installing backend dependencies: started 2023-09-20T22:08:04,987 Running command pip subprocess to install backend dependencies 2023-09-20T22:08:06,559 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-09-20T22:08:07,042 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-20T22:08:07,652 Collecting wheel 2023-09-20T22:08:07,671 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB) 2023-09-20T22:08:09,885 Installing collected packages: wheel 2023-09-20T22:08:10,105 Creating /tmp/pip-build-env-8eghbtch/normal/local/bin 2023-09-20T22:08:10,107 changing mode of /tmp/pip-build-env-8eghbtch/normal/local/bin/wheel to 755 2023-09-20T22:08:10,118 Successfully installed wheel-0.41.2 2023-09-20T22:08:10,582 Installing backend dependencies: finished with status 'done' 2023-09-20T22:08:10,584 Created temporary directory: /tmp/pip-modern-metadata-qoy21jw1 2023-09-20T22:08:10,586 Preparing metadata (pyproject.toml): started 2023-09-20T22:08:10,588 Running command Preparing metadata (pyproject.toml) 2023-09-20T22:08:11,548 running dist_info 2023-09-20T22:08:11,554 creating /tmp/pip-modern-metadata-qoy21jw1/genomedata.egg-info 2023-09-20T22:08:11,558 writing /tmp/pip-modern-metadata-qoy21jw1/genomedata.egg-info/PKG-INFO 2023-09-20T22:08:11,562 writing dependency_links to /tmp/pip-modern-metadata-qoy21jw1/genomedata.egg-info/dependency_links.txt 2023-09-20T22:08:11,564 writing entry points to /tmp/pip-modern-metadata-qoy21jw1/genomedata.egg-info/entry_points.txt 2023-09-20T22:08:11,565 writing requirements to /tmp/pip-modern-metadata-qoy21jw1/genomedata.egg-info/requires.txt 2023-09-20T22:08:11,566 writing top-level names to /tmp/pip-modern-metadata-qoy21jw1/genomedata.egg-info/top_level.txt 2023-09-20T22:08:11,568 writing manifest file '/tmp/pip-modern-metadata-qoy21jw1/genomedata.egg-info/SOURCES.txt' 2023-09-20T22:08:11,607 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2023-09-20T22:08:11,611 reading manifest file '/tmp/pip-modern-metadata-qoy21jw1/genomedata.egg-info/SOURCES.txt' 2023-09-20T22:08:11,613 reading manifest template 'MANIFEST.in' 2023-09-20T22:08:11,614 no previously-included directories found matching 'Docker' 2023-09-20T22:08:11,615 no previously-included directories found matching '.github' 2023-09-20T22:08:11,615 warning: no previously-included files found matching '.gitignore' 2023-09-20T22:08:11,616 warning: no previously-included files found matching '.readthedocs.yml' 2023-09-20T22:08:11,617 warning: no previously-included files found matching 'environment.yml' 2023-09-20T22:08:11,617 adding license file 'LICENSE' 2023-09-20T22:08:11,618 writing manifest file '/tmp/pip-modern-metadata-qoy21jw1/genomedata.egg-info/SOURCES.txt' 2023-09-20T22:08:11,620 creating '/tmp/pip-modern-metadata-qoy21jw1/genomedata-1.6.0.dist-info' 2023-09-20T22:08:11,776 Preparing metadata (pyproject.toml): finished with status 'done' 2023-09-20T22:08:11,781 Source in /tmp/pip-wheel-k5gabh2h/genomedata_112e4fc30cce40f3a065e63311a8ff2d has version 1.6.0, which satisfies requirement genomedata==1.6.0 from https://files.pythonhosted.org/packages/c8/3e/5c129fe3741973f82237960de335321215ffdb52fa6408e2a0485e1f8540/genomedata-1.6.0.tar.gz 2023-09-20T22:08:11,782 Removed genomedata==1.6.0 from https://files.pythonhosted.org/packages/c8/3e/5c129fe3741973f82237960de335321215ffdb52fa6408e2a0485e1f8540/genomedata-1.6.0.tar.gz from build tracker '/tmp/pip-build-tracker-eq7zr8_6' 2023-09-20T22:08:11,787 Created temporary directory: /tmp/pip-unpack-ewqs2wjg 2023-09-20T22:08:11,788 Created temporary directory: /tmp/pip-unpack-_kep55ko 2023-09-20T22:08:11,796 Building wheels for collected packages: genomedata 2023-09-20T22:08:11,800 Created temporary directory: /tmp/pip-wheel-mnkq1gv0 2023-09-20T22:08:11,801 Destination directory: /tmp/pip-wheel-mnkq1gv0 2023-09-20T22:08:11,803 Building wheel for genomedata (pyproject.toml): started 2023-09-20T22:08:11,804 Running command Building wheel for genomedata (pyproject.toml) 2023-09-20T22:08:13,088 running bdist_wheel 2023-09-20T22:08:13,111 running build 2023-09-20T22:08:13,111 running build_py 2023-09-20T22:08:13,117 creating build 2023-09-20T22:08:13,117 creating build/lib.linux-armv7l-cpython-311 2023-09-20T22:08:13,118 creating build/lib.linux-armv7l-cpython-311/genomedata 2023-09-20T22:08:13,119 copying genomedata/load_genomedata.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-20T22:08:13,122 copying genomedata/_query.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-20T22:08:13,124 copying genomedata/_hardmask_parsers.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-20T22:08:13,126 copying genomedata/_close_data.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-20T22:08:13,130 copying genomedata/_chromosome.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-20T22:08:13,133 copying genomedata/__init__.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-20T22:08:13,136 copying genomedata/_erase_data.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-20T22:08:13,138 copying genomedata/_hdf5.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-20T22:08:13,141 copying genomedata/_util.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-20T22:08:13,144 copying genomedata/_load_seq.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-20T22:08:13,147 copying genomedata/_report.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-20T22:08:13,149 copying genomedata/_open_data.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-20T22:08:13,151 copying genomedata/_info.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-20T22:08:13,152 copying genomedata/_histogram.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-20T22:08:13,154 copying genomedata/_hardmask.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-20T22:08:13,157 copying genomedata/_load_data.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-20T22:08:13,159 running egg_info 2023-09-20T22:08:13,164 writing genomedata.egg-info/PKG-INFO 2023-09-20T22:08:13,167 writing dependency_links to genomedata.egg-info/dependency_links.txt 2023-09-20T22:08:13,169 writing entry points to genomedata.egg-info/entry_points.txt 2023-09-20T22:08:13,170 writing requirements to genomedata.egg-info/requires.txt 2023-09-20T22:08:13,171 writing top-level names to genomedata.egg-info/top_level.txt 2023-09-20T22:08:13,198 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2023-09-20T22:08:13,201 reading manifest file 'genomedata.egg-info/SOURCES.txt' 2023-09-20T22:08:13,231 reading manifest template 'MANIFEST.in' 2023-09-20T22:08:13,232 no previously-included directories found matching 'Docker' 2023-09-20T22:08:13,233 no previously-included directories found matching '.github' 2023-09-20T22:08:13,234 warning: no previously-included files found matching '.gitignore' 2023-09-20T22:08:13,234 warning: no previously-included files found matching '.readthedocs.yml' 2023-09-20T22:08:13,235 warning: no previously-included files found matching 'environment.yml' 2023-09-20T22:08:13,235 adding license file 'LICENSE' 2023-09-20T22:08:13,242 writing manifest file 'genomedata.egg-info/SOURCES.txt' 2023-09-20T22:08:13,250 running build_ext 2023-09-20T22:08:13,255 building '_c_load_data' extension 2023-09-20T22:08:13,255 creating build/temp.linux-armv7l-cpython-311 2023-09-20T22:08:13,256 creating build/temp.linux-armv7l-cpython-311/src 2023-09-20T22:08:13,257 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DPy_LIMITED_API=0x03070000 -I/usr/include -I/usr/include/hdf5/serial -I/usr/include/python3.11 -c src/_c_load_data.c -o build/temp.linux-armv7l-cpython-311/src/_c_load_data.o 2023-09-20T22:08:15,268 src/_c_load_data.c: In function ‘load_data_from_stdin’: 2023-09-20T22:08:15,268 src/_c_load_data.c:132:13: warning: passing argument 1 of ‘load_data’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 2023-09-20T22:08:15,269 132 | load_data(gdfilename, trackname, (bool)verbose); 2023-09-20T22:08:15,269 | ^~~~~~~~~~ 2023-09-20T22:08:15,270 src/_c_load_data.c:122:22: note: expected ‘char *’ but argument is of type ‘const char *’ 2023-09-20T22:08:15,271 122 | void load_data(char* gdfilename, char* trackname, bool verbose); 2023-09-20T22:08:15,272 | ~~~~~~^~~~~~~~~~ 2023-09-20T22:08:15,273 src/_c_load_data.c:132:25: warning: passing argument 2 of ‘load_data’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 2023-09-20T22:08:15,274 132 | load_data(gdfilename, trackname, (bool)verbose); 2023-09-20T22:08:15,275 | ^~~~~~~~~ 2023-09-20T22:08:15,276 src/_c_load_data.c:122:40: note: expected ‘char *’ but argument is of type ‘const char *’ 2023-09-20T22:08:15,277 122 | void load_data(char* gdfilename, char* trackname, bool verbose); 2023-09-20T22:08:15,277 | ~~~~~~^~~~~~~~~ 2023-09-20T22:08:17,309 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/_c_load_data.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -L/usr/lib/arm-linux-gnueabihf -lhdf5 -lm -lz -o build/lib.linux-armv7l-cpython-311/genomedata/_c_load_data.abi3.so 2023-09-20T22:08:17,537 installing to build/bdist.linux-armv7l/wheel 2023-09-20T22:08:17,537 running install 2023-09-20T22:08:17,561 running install_lib 2023-09-20T22:08:17,566 creating build/bdist.linux-armv7l 2023-09-20T22:08:17,567 creating build/bdist.linux-armv7l/wheel 2023-09-20T22:08:17,569 creating build/bdist.linux-armv7l/wheel/genomedata 2023-09-20T22:08:17,570 copying build/lib.linux-armv7l-cpython-311/genomedata/load_genomedata.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-20T22:08:17,612 copying build/lib.linux-armv7l-cpython-311/genomedata/_query.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-20T22:08:17,632 copying build/lib.linux-armv7l-cpython-311/genomedata/_hardmask_parsers.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-20T22:08:17,635 copying build/lib.linux-armv7l-cpython-311/genomedata/_c_load_data.abi3.so -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-20T22:08:17,640 copying build/lib.linux-armv7l-cpython-311/genomedata/_close_data.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-20T22:08:17,644 copying build/lib.linux-armv7l-cpython-311/genomedata/_chromosome.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-20T22:08:17,647 copying build/lib.linux-armv7l-cpython-311/genomedata/__init__.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-20T22:08:17,652 copying build/lib.linux-armv7l-cpython-311/genomedata/_erase_data.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-20T22:08:17,654 copying build/lib.linux-armv7l-cpython-311/genomedata/_hdf5.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-20T22:08:17,660 copying build/lib.linux-armv7l-cpython-311/genomedata/_util.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-20T22:08:17,791 copying build/lib.linux-armv7l-cpython-311/genomedata/_load_seq.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-20T22:08:17,794 copying build/lib.linux-armv7l-cpython-311/genomedata/_report.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-20T22:08:17,796 copying build/lib.linux-armv7l-cpython-311/genomedata/_open_data.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-20T22:08:17,798 copying build/lib.linux-armv7l-cpython-311/genomedata/_info.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-20T22:08:17,800 copying build/lib.linux-armv7l-cpython-311/genomedata/_histogram.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-20T22:08:17,802 copying build/lib.linux-armv7l-cpython-311/genomedata/_hardmask.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-20T22:08:17,804 copying build/lib.linux-armv7l-cpython-311/genomedata/_load_data.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-20T22:08:17,806 running install_egg_info 2023-09-20T22:08:17,811 Copying genomedata.egg-info to build/bdist.linux-armv7l/wheel/genomedata-1.6.0-py3.11.egg-info 2023-09-20T22:08:17,823 running install_scripts 2023-09-20T22:08:17,874 creating build/bdist.linux-armv7l/wheel/genomedata-1.6.0.dist-info/WHEEL 2023-09-20T22:08:17,877 creating '/tmp/pip-wheel-mnkq1gv0/.tmp-e1tpwjpm/genomedata-1.6.0-cp37-abi3-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-09-20T22:08:17,880 adding 'genomedata/__init__.py' 2023-09-20T22:08:17,895 adding 'genomedata/_c_load_data.abi3.so' 2023-09-20T22:08:17,899 adding 'genomedata/_chromosome.py' 2023-09-20T22:08:17,902 adding 'genomedata/_close_data.py' 2023-09-20T22:08:17,903 adding 'genomedata/_erase_data.py' 2023-09-20T22:08:17,905 adding 'genomedata/_hardmask.py' 2023-09-20T22:08:17,907 adding 'genomedata/_hardmask_parsers.py' 2023-09-20T22:08:17,909 adding 'genomedata/_hdf5.py' 2023-09-20T22:08:17,911 adding 'genomedata/_histogram.py' 2023-09-20T22:08:17,912 adding 'genomedata/_info.py' 2023-09-20T22:08:17,914 adding 'genomedata/_load_data.py' 2023-09-20T22:08:17,916 adding 'genomedata/_load_seq.py' 2023-09-20T22:08:17,918 adding 'genomedata/_open_data.py' 2023-09-20T22:08:17,919 adding 'genomedata/_query.py' 2023-09-20T22:08:17,921 adding 'genomedata/_report.py' 2023-09-20T22:08:17,922 adding 'genomedata/_util.py' 2023-09-20T22:08:17,924 adding 'genomedata/load_genomedata.py' 2023-09-20T22:08:17,928 adding 'genomedata-1.6.0.dist-info/LICENSE' 2023-09-20T22:08:17,930 adding 'genomedata-1.6.0.dist-info/METADATA' 2023-09-20T22:08:17,931 adding 'genomedata-1.6.0.dist-info/WHEEL' 2023-09-20T22:08:17,932 adding 'genomedata-1.6.0.dist-info/entry_points.txt' 2023-09-20T22:08:17,933 adding 'genomedata-1.6.0.dist-info/top_level.txt' 2023-09-20T22:08:17,934 adding 'genomedata-1.6.0.dist-info/RECORD' 2023-09-20T22:08:17,937 removing build/bdist.linux-armv7l/wheel 2023-09-20T22:08:18,088 Building wheel for genomedata (pyproject.toml): finished with status 'done' 2023-09-20T22:08:18,097 Created wheel for genomedata: filename=genomedata-1.6.0-cp37-abi3-linux_armv7l.whl size=88780 sha256=1dfaaa9f1910becb35328b88cf4ea1866bfb0efb37d60b0078b1d0cb7247f345 2023-09-20T22:08:18,099 Stored in directory: /tmp/pip-ephem-wheel-cache-nogyyu45/wheels/89/73/9a/f5fe337b6d20a46b3288edad8c5f967c519051e8aa602cab06 2023-09-20T22:08:18,110 Successfully built genomedata 2023-09-20T22:08:18,115 Removed build tracker: '/tmp/pip-build-tracker-eq7zr8_6'