2023-09-23T01:26:14,926 Created temporary directory: /tmp/pip-build-tracker-eng81_r7 2023-09-23T01:26:14,927 Initialized build tracking at /tmp/pip-build-tracker-eng81_r7 2023-09-23T01:26:14,927 Created build tracker: /tmp/pip-build-tracker-eng81_r7 2023-09-23T01:26:14,928 Entered build tracker: /tmp/pip-build-tracker-eng81_r7 2023-09-23T01:26:14,929 Created temporary directory: /tmp/pip-wheel-9l5gdxz_ 2023-09-23T01:26:14,932 Created temporary directory: /tmp/pip-ephem-wheel-cache-823k48vf 2023-09-23T01:26:14,954 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-23T01:26:14,958 2 location(s) to search for versions of camotss: 2023-09-23T01:26:14,958 * https://pypi.org/simple/camotss/ 2023-09-23T01:26:14,958 * https://www.piwheels.org/simple/camotss/ 2023-09-23T01:26:14,959 Fetching project page and analyzing links: https://pypi.org/simple/camotss/ 2023-09-23T01:26:14,960 Getting page https://pypi.org/simple/camotss/ 2023-09-23T01:26:14,961 Found index url https://pypi.org/simple/ 2023-09-23T01:26:15,103 Fetched page https://pypi.org/simple/camotss/ as application/vnd.pypi.simple.v1+json 2023-09-23T01:26:15,107 Found link https://files.pythonhosted.org/packages/0b/8b/b9fb075cc243dc251773b1cf76aef9792786bbefa49005d344f3518abe60/CamoTSS-0.0.5.tar.gz (from https://pypi.org/simple/camotss/) (requires-python:>=3.5), version: 0.0.5 2023-09-23T01:26:15,107 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/33/a6/bbcc1a258a338f0ba390098cd0a1ba129f08b4fc031e3e664efc3573b2ed/CamoTSS-0.0.6-py3.7.egg (from https://pypi.org/simple/camotss/) (requires-python:>=3.5) 2023-09-23T01:26:15,108 Found link https://files.pythonhosted.org/packages/49/2e/3f9b842e019acd4ab4732d7e256e4a769033ec35300c88294368757b4bba/CamoTSS-0.0.6.tar.gz (from https://pypi.org/simple/camotss/) (requires-python:>=3.5), version: 0.0.6 2023-09-23T01:26:15,110 Found link https://files.pythonhosted.org/packages/ff/0c/d5f6365340c636a739e964b4f9e5c89ec7fcf127692cab727e068bf781a8/CamoTSS-0.0.7.tar.gz (from https://pypi.org/simple/camotss/) (requires-python:>=3.5), version: 0.0.7 2023-09-23T01:26:15,111 Found link https://files.pythonhosted.org/packages/48/03/d2cefdf14bbdd445664d9132a5d11a86dc34fc3f51913bbfef8cefece884/CamoTSS-0.0.8.tar.gz (from https://pypi.org/simple/camotss/) (requires-python:>=3.5), version: 0.0.8 2023-09-23T01:26:15,112 Found link https://files.pythonhosted.org/packages/4c/f4/caa33146b7180d344e6e55eb1a8e32f779ac711086115a8b659f7cd5e108/CamoTSS-0.0.9.tar.gz (from https://pypi.org/simple/camotss/) (requires-python:>=3.5), version: 0.0.9 2023-09-23T01:26:15,114 Found link https://files.pythonhosted.org/packages/bb/b4/7b34b6e4e3c0b6777c3232611754cf3eef94c96a41d8088f818752e4c189/CamoTSS-0.1.0.tar.gz (from https://pypi.org/simple/camotss/) (requires-python:>=3.5), version: 0.1.0 2023-09-23T01:26:15,115 Found link https://files.pythonhosted.org/packages/e3/3e/1ffb0a1c5db98c43855485e846a7cf20ac48c71d46ca976d16ced2abf1d0/CamoTSS-0.1.1.tar.gz (from https://pypi.org/simple/camotss/) (requires-python:>=3.5), version: 0.1.1 2023-09-23T01:26:15,116 Found link https://files.pythonhosted.org/packages/22/1b/0423fa207d6473f36357c550d83ab2455f60ecdf39a820a489e819f80d2c/CamoTSS-0.1.3.tar.gz (from https://pypi.org/simple/camotss/) (requires-python:>=3.5), version: 0.1.3 2023-09-23T01:26:15,117 Found link https://files.pythonhosted.org/packages/cb/76/d448a32c582f59995600038ca67fe9726f00ffc7b1b2029575aa52bb558f/CamoTSS-0.1.4.tar.gz (from https://pypi.org/simple/camotss/) (requires-python:>=3.5), version: 0.1.4 2023-09-23T01:26:15,119 Found link https://files.pythonhosted.org/packages/bf/89/5dd692a70a948fc379fceaa5d9be9ba2675acd517eac70dd6c7dd34c2939/CamoTSS-0.1.5.tar.gz (from https://pypi.org/simple/camotss/) (requires-python:>=3.5), version: 0.1.5 2023-09-23T01:26:15,120 Found link https://files.pythonhosted.org/packages/e4/0d/a4a29abf3d38b5ad2258032ceec0fbbe3d86dc6a245ef8bcda51975aa785/CamoTSS-0.1.6.tar.gz (from https://pypi.org/simple/camotss/) (requires-python:>=3.5), version: 0.1.6 2023-09-23T01:26:15,121 Found link https://files.pythonhosted.org/packages/f3/63/83929393bc24e6c9365d2ad05fda819fdf0c14bf413784a2bcb285a0af0f/CamoTSS-0.1.7.tar.gz (from https://pypi.org/simple/camotss/) (requires-python:>=3.5), version: 0.1.7 2023-09-23T01:26:15,123 Fetching project page and analyzing links: https://www.piwheels.org/simple/camotss/ 2023-09-23T01:26:15,124 Getting page https://www.piwheels.org/simple/camotss/ 2023-09-23T01:26:15,126 Found index url https://www.piwheels.org/simple/ 2023-09-23T01:26:15,283 Fetched page https://www.piwheels.org/simple/camotss/ as text/html 2023-09-23T01:26:15,286 Skipping link: No binaries permitted for camotss: https://www.piwheels.org/simple/camotss/CamoTSS-0.1.7-py3-none-any.whl#sha256=a18f59614a7c387c23b274ed9544ab1686b4e366f120466699be29de421d8b14 (from https://www.piwheels.org/simple/camotss/) (requires-python:>=3.5) 2023-09-23T01:26:15,287 Skipping link: No binaries permitted for camotss: https://www.piwheels.org/simple/camotss/CamoTSS-0.1.6-py3-none-any.whl#sha256=76244b00cf663b81582a57443f055d54081d3e3fa3209a0a78bffa8e6037250e (from https://www.piwheels.org/simple/camotss/) (requires-python:>=3.5) 2023-09-23T01:26:15,287 Skipping link: No binaries permitted for camotss: https://www.piwheels.org/simple/camotss/CamoTSS-0.1.5-py3-none-any.whl#sha256=dade070266c87b6550d90dcfac3fc84a507317d8b11c7cd4a82ecdb76824ae32 (from https://www.piwheels.org/simple/camotss/) (requires-python:>=3.5) 2023-09-23T01:26:15,287 Skipping link: No binaries permitted for camotss: https://www.piwheels.org/simple/camotss/CamoTSS-0.1.4-py3-none-any.whl#sha256=5e39e57ff2a7ab583ae34ad17aa4798c0929a5970ac64101882da29118cbb86d (from https://www.piwheels.org/simple/camotss/) (requires-python:>=3.5) 2023-09-23T01:26:15,288 Skipping link: No binaries permitted for camotss: https://www.piwheels.org/simple/camotss/CamoTSS-0.0.5-py3-none-any.whl#sha256=718fa44d80f81f3bc6eef5839e4be2b240f3308e1461a16c438dd3a470c4778c (from https://www.piwheels.org/simple/camotss/) (requires-python:>=3.5) 2023-09-23T01:26:15,289 Skipping link: not a file: https://www.piwheels.org/simple/camotss/ 2023-09-23T01:26:15,289 Skipping link: not a file: https://pypi.org/simple/camotss/ 2023-09-23T01:26:15,309 Given no hashes to check 1 links for project 'camotss': discarding no candidates 2023-09-23T01:26:15,326 Collecting camotss==0.0.7 2023-09-23T01:26:15,329 Created temporary directory: /tmp/pip-unpack-lnzcyo_j 2023-09-23T01:26:15,551 Downloading CamoTSS-0.0.7.tar.gz (9.9 MB) 2023-09-23T01:26:18,858 Added camotss==0.0.7 from https://files.pythonhosted.org/packages/ff/0c/d5f6365340c636a739e964b4f9e5c89ec7fcf127692cab727e068bf781a8/CamoTSS-0.0.7.tar.gz to build tracker '/tmp/pip-build-tracker-eng81_r7' 2023-09-23T01:26:18,859 Running setup.py (path:/tmp/pip-wheel-9l5gdxz_/camotss_fdf87c3bb777493a9f069cf038258e0b/setup.py) egg_info for package camotss 2023-09-23T01:26:18,860 Created temporary directory: /tmp/pip-pip-egg-info-cbco88go 2023-09-23T01:26:18,861 Preparing metadata (setup.py): started 2023-09-23T01:26:18,862 Running command python setup.py egg_info 2023-09-23T01:26:19,816 error in CamoTSS setup command: 'install_requires' must be a string or list of strings containing valid project/version requirement specifiers; Expected end or semicolon (after version specifier) 2023-09-23T01:26:19,816 pyranges>=0.0.115scanpy>=1.5 2023-09-23T01:26:19,817 ~~~~~~~~~^ 2023-09-23T01:26:19,921 ERROR: [present-rich] python setup.py egg_info exited with 1 2023-09-23T01:26:19,934 [bold magenta]full command[/]: [blue]/usr/bin/python3 -c ' 2023-09-23T01:26:19,934 exec(compile('"'"''"'"''"'"' 2023-09-23T01:26:19,934 # This is -- a caller that pip uses to run setup.py 2023-09-23T01:26:19,934 # 2023-09-23T01:26:19,934 # - It imports setuptools before invoking setup.py, to enable projects that directly 2023-09-23T01:26:19,934 # import from `distutils.core` to work with newer packaging standards. 2023-09-23T01:26:19,934 # - It provides a clear error message when setuptools is not installed. 2023-09-23T01:26:19,934 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2023-09-23T01:26:19,934 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2023-09-23T01:26:19,934 # manifest_maker: standard file '"'"'-c'"'"' not found". 2023-09-23T01:26:19,934 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2023-09-23T01:26:19,934 import os, sys, tokenize 2023-09-23T01:26:19,934 2023-09-23T01:26:19,934 try: 2023-09-23T01:26:19,934 import setuptools 2023-09-23T01:26:19,934 except ImportError as error: 2023-09-23T01:26:19,934 print( 2023-09-23T01:26:19,934 "ERROR: Can not execute `setup.py` since setuptools is not available in " 2023-09-23T01:26:19,934 "the build environment.", 2023-09-23T01:26:19,934 file=sys.stderr, 2023-09-23T01:26:19,934 ) 2023-09-23T01:26:19,934 sys.exit(1) 2023-09-23T01:26:19,934 2023-09-23T01:26:19,934 __file__ = %r 2023-09-23T01:26:19,934 sys.argv[0] = __file__ 2023-09-23T01:26:19,934 2023-09-23T01:26:19,934 if os.path.exists(__file__): 2023-09-23T01:26:19,934 filename = __file__ 2023-09-23T01:26:19,934 with tokenize.open(__file__) as f: 2023-09-23T01:26:19,934 setup_py_code = f.read() 2023-09-23T01:26:19,934 else: 2023-09-23T01:26:19,934 filename = "" 2023-09-23T01:26:19,934 setup_py_code = "from setuptools import setup; setup()" 2023-09-23T01:26:19,934 2023-09-23T01:26:19,934 exec(compile(setup_py_code, filename, "exec")) 2023-09-23T01:26:19,934 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-9l5gdxz_/camotss_fdf87c3bb777493a9f069cf038258e0b/setup.py'"'"',), "", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-cbco88go[/] 2023-09-23T01:26:19,935 [bold magenta]cwd[/]: /tmp/pip-wheel-9l5gdxz_/camotss_fdf87c3bb777493a9f069cf038258e0b/ 2023-09-23T01:26:19,936 Preparing metadata (setup.py): finished with status 'error' 2023-09-23T01:26:19,937 ERROR: [present-rich] metadata generation failed 2023-09-23T01:26:19,943 Exception information: 2023-09-23T01:26:19,943 Traceback (most recent call last): 2023-09-23T01:26:19,943 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 64, in generate_metadata 2023-09-23T01:26:19,943 call_subprocess( 2023-09-23T01:26:19,943 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess 2023-09-23T01:26:19,943 raise error 2023-09-23T01:26:19,943 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1 2023-09-23T01:26:19,943 2023-09-23T01:26:19,943 The above exception was the direct cause of the following exception: 2023-09-23T01:26:19,943 2023-09-23T01:26:19,943 Traceback (most recent call last): 2023-09-23T01:26:19,943 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper 2023-09-23T01:26:19,943 status = run_func(*args) 2023-09-23T01:26:19,943 ^^^^^^^^^^^^^^^ 2023-09-23T01:26:19,943 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper 2023-09-23T01:26:19,943 return func(self, options, args) 2023-09-23T01:26:19,943 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-23T01:26:19,943 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 147, in run 2023-09-23T01:26:19,943 requirement_set = resolver.resolve(reqs, check_supported_wheels=True) 2023-09-23T01:26:19,943 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-23T01:26:19,943 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 92, in resolve 2023-09-23T01:26:19,943 result = self._result = resolver.resolve( 2023-09-23T01:26:19,943 ^^^^^^^^^^^^^^^^^ 2023-09-23T01:26:19,943 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 546, in resolve 2023-09-23T01:26:19,943 state = resolution.resolve(requirements, max_rounds=max_rounds) 2023-09-23T01:26:19,943 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-23T01:26:19,943 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 397, in resolve 2023-09-23T01:26:19,943 self._add_to_criteria(self.state.criteria, r, parent=None) 2023-09-23T01:26:19,943 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria 2023-09-23T01:26:19,943 if not criterion.candidates: 2023-09-23T01:26:19,943 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/structs.py", line 156, in __bool__ 2023-09-23T01:26:19,943 return bool(self._sequence) 2023-09-23T01:26:19,943 ^^^^^^^^^^^^^^^^^^^^ 2023-09-23T01:26:19,943 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__ 2023-09-23T01:26:19,943 return any(self) 2023-09-23T01:26:19,943 ^^^^^^^^^ 2023-09-23T01:26:19,943 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in 2023-09-23T01:26:19,943 return (c for c in iterator if id(c) not in self._incompatible_ids) 2023-09-23T01:26:19,943 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-23T01:26:19,943 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built 2023-09-23T01:26:19,943 candidate = func() 2023-09-23T01:26:19,943 ^^^^^^ 2023-09-23T01:26:19,943 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 206, in _make_candidate_from_link 2023-09-23T01:26:19,943 self._link_candidate_cache[link] = LinkCandidate( 2023-09-23T01:26:19,943 ^^^^^^^^^^^^^^ 2023-09-23T01:26:19,943 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 293, in __init__ 2023-09-23T01:26:19,943 super().__init__( 2023-09-23T01:26:19,943 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 156, in __init__ 2023-09-23T01:26:19,943 self.dist = self._prepare() 2023-09-23T01:26:19,943 ^^^^^^^^^^^^^^^ 2023-09-23T01:26:19,943 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 225, in _prepare 2023-09-23T01:26:19,943 dist = self._prepare_distribution() 2023-09-23T01:26:19,943 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-23T01:26:19,943 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 304, in _prepare_distribution 2023-09-23T01:26:19,943 return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True) 2023-09-23T01:26:19,943 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-23T01:26:19,943 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 538, in prepare_linked_requirement 2023-09-23T01:26:19,943 return self._prepare_linked_requirement(req, parallel_builds) 2023-09-23T01:26:19,943 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-23T01:26:19,943 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 653, in _prepare_linked_requirement 2023-09-23T01:26:19,943 dist = _get_prepared_distribution( 2023-09-23T01:26:19,943 ^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-23T01:26:19,943 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 69, in _get_prepared_distribution 2023-09-23T01:26:19,943 abstract_dist.prepare_distribution_metadata( 2023-09-23T01:26:19,943 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/distributions/sdist.py", line 61, in prepare_distribution_metadata 2023-09-23T01:26:19,943 self.req.prepare_metadata() 2023-09-23T01:26:19,943 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/req/req_install.py", line 568, in prepare_metadata 2023-09-23T01:26:19,943 self.metadata_directory = generate_metadata_legacy( 2023-09-23T01:26:19,943 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-23T01:26:19,943 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 71, in generate_metadata 2023-09-23T01:26:19,943 raise MetadataGenerationFailed(package_details=details) from error 2023-09-23T01:26:19,943 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed 2023-09-23T01:26:19,955 Removed camotss==0.0.7 from https://files.pythonhosted.org/packages/ff/0c/d5f6365340c636a739e964b4f9e5c89ec7fcf127692cab727e068bf781a8/CamoTSS-0.0.7.tar.gz from build tracker '/tmp/pip-build-tracker-eng81_r7' 2023-09-23T01:26:19,956 Removed build tracker: '/tmp/pip-build-tracker-eng81_r7'