2023-09-23T20:30:42,932 Created temporary directory: /tmp/pip-build-tracker-tlf3ozer 2023-09-23T20:30:42,933 Initialized build tracking at /tmp/pip-build-tracker-tlf3ozer 2023-09-23T20:30:42,934 Created build tracker: /tmp/pip-build-tracker-tlf3ozer 2023-09-23T20:30:42,934 Entered build tracker: /tmp/pip-build-tracker-tlf3ozer 2023-09-23T20:30:42,935 Created temporary directory: /tmp/pip-wheel-7mdvixd0 2023-09-23T20:30:42,938 Created temporary directory: /tmp/pip-ephem-wheel-cache-gew2orbz 2023-09-23T20:30:42,960 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-23T20:30:42,963 2 location(s) to search for versions of biolink-model: 2023-09-23T20:30:42,963 * https://pypi.org/simple/biolink-model/ 2023-09-23T20:30:42,963 * https://www.piwheels.org/simple/biolink-model/ 2023-09-23T20:30:42,964 Fetching project page and analyzing links: https://pypi.org/simple/biolink-model/ 2023-09-23T20:30:42,965 Getting page https://pypi.org/simple/biolink-model/ 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https://www.piwheels.org/simple/biolink-model/biolink_model-1.2.3-py3-none-any.whl#sha256=882f1d08c2a5605c40c0ae3368dcc1acbf5349c9f9aff243c999f6fa575a1e52 (from https://www.piwheels.org/simple/biolink-model/) (requires-python:>=3.7) 2023-09-23T20:30:43,448 Skipping link: No binaries permitted for biolink-model: https://www.piwheels.org/simple/biolink-model/biolink_model-1.2.2-py3-none-any.whl#sha256=460f615978ea5b78c1736ba23bc4c05f92a8125034eed571f83a57f1fc06f8fd (from https://www.piwheels.org/simple/biolink-model/) (requires-python:>=3.7) 2023-09-23T20:30:43,449 Skipping link: not a file: https://www.piwheels.org/simple/biolink-model/ 2023-09-23T20:30:43,450 Skipping link: not a file: https://pypi.org/simple/biolink-model/ 2023-09-23T20:30:43,473 Given no hashes to check 1 links for project 'biolink-model': discarding no candidates 2023-09-23T20:30:43,491 Collecting biolink-model==3.3.2 2023-09-23T20:30:43,494 Created temporary directory: /tmp/pip-unpack-p06l986i 2023-09-23T20:30:43,704 Downloading biolink-model-3.3.2.tar.gz (123 kB) 2023-09-23T20:30:43,870 Added biolink-model==3.3.2 from https://files.pythonhosted.org/packages/f3/d7/2beac54baed4edf10f2e15f8c7e109c7f3601e4152d9ad0c7a73fb3cc8a6/biolink-model-3.3.2.tar.gz to build tracker '/tmp/pip-build-tracker-tlf3ozer' 2023-09-23T20:30:43,875 Created temporary directory: /tmp/pip-build-env-njm3i2fl 2023-09-23T20:30:43,880 Installing build dependencies: started 2023-09-23T20:30:43,881 Running command pip subprocess to install build dependencies 2023-09-23T20:30:45,053 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-09-23T20:30:45,544 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-23T20:30:46,041 Collecting poetry-core>=1.0.0 2023-09-23T20:30:46,084 Using cached https://www.piwheels.org/simple/poetry-core/poetry_core-1.7.0-py3-none-any.whl (426 kB) 2023-09-23T20:30:46,291 Collecting poetry-dynamic-versioning 2023-09-23T20:30:46,305 Using cached https://www.piwheels.org/simple/poetry-dynamic-versioning/poetry_dynamic_versioning-1.0.1-py3-none-any.whl (17 kB) 2023-09-23T20:30:46,485 Collecting dunamai<2.0.0,>=1.18.0 (from poetry-dynamic-versioning) 2023-09-23T20:30:46,486 Obtaining dependency information for dunamai<2.0.0,>=1.18.0 from https://files.pythonhosted.org/packages/19/87/d097cc1f44cfd5757ed3a09c05cd7e934cb2ad313dd541d2ad0710f7152c/dunamai-1.18.1-py3-none-any.whl.metadata 2023-09-23T20:30:46,492 Using cached dunamai-1.18.1-py3-none-any.whl.metadata (10.0 kB) 2023-09-23T20:30:46,633 Collecting jinja2<4,>=2.11.1 (from poetry-dynamic-versioning) 2023-09-23T20:30:46,652 Using cached https://www.piwheels.org/simple/jinja2/Jinja2-3.1.2-py3-none-any.whl (133 kB) 2023-09-23T20:30:46,865 Collecting tomlkit>=0.4 (from poetry-dynamic-versioning) 2023-09-23T20:30:46,881 Using cached https://www.piwheels.org/simple/tomlkit/tomlkit-0.12.1-py3-none-any.whl (37 kB) 2023-09-23T20:30:47,040 Collecting packaging>=20.9 (from dunamai<2.0.0,>=1.18.0->poetry-dynamic-versioning) 2023-09-23T20:30:47,053 Using cached https://www.piwheels.org/simple/packaging/packaging-23.1-py3-none-any.whl (48 kB) 2023-09-23T20:30:47,376 Collecting MarkupSafe>=2.0 (from jinja2<4,>=2.11.1->poetry-dynamic-versioning) 2023-09-23T20:30:47,390 Using cached https://www.piwheels.org/simple/markupsafe/MarkupSafe-2.1.3-cp311-cp311-linux_armv7l.whl (26 kB) 2023-09-23T20:30:47,421 Using cached dunamai-1.18.1-py3-none-any.whl (24 kB) 2023-09-23T20:30:49,692 Installing collected packages: tomlkit, poetry-core, packaging, MarkupSafe, jinja2, dunamai, poetry-dynamic-versioning 2023-09-23T20:30:51,990 Creating /tmp/pip-build-env-njm3i2fl/overlay/local/bin 2023-09-23T20:30:51,993 changing mode of /tmp/pip-build-env-njm3i2fl/overlay/local/bin/dunamai to 755 2023-09-23T20:30:52,053 changing mode of /tmp/pip-build-env-njm3i2fl/overlay/local/bin/poetry-dynamic-versioning to 755 2023-09-23T20:30:52,103 Successfully installed MarkupSafe-2.1.3 dunamai-1.18.1 jinja2-3.1.2 packaging-23.1 poetry-core-1.7.0 poetry-dynamic-versioning-1.0.1 tomlkit-0.12.1 2023-09-23T20:30:52,603 Installing build dependencies: finished with status 'done' 2023-09-23T20:30:52,607 Getting requirements to build wheel: started 2023-09-23T20:30:52,608 Running command Getting requirements to build wheel 2023-09-23T20:30:53,029 Getting requirements to build wheel: finished with status 'done' 2023-09-23T20:30:53,032 Created temporary directory: /tmp/pip-modern-metadata-dm_vgfnm 2023-09-23T20:30:53,035 Preparing metadata (pyproject.toml): started 2023-09-23T20:30:53,036 Running command Preparing metadata (pyproject.toml) 2023-09-23T20:30:53,967 Traceback (most recent call last): 2023-09-23T20:30:53,967 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 353, in 2023-09-23T20:30:53,968 main() 2023-09-23T20:30:53,968 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 335, in main 2023-09-23T20:30:53,969 json_out['return_val'] = hook(**hook_input['kwargs']) 2023-09-23T20:30:53,970 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-23T20:30:53,970 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 149, in prepare_metadata_for_build_wheel 2023-09-23T20:30:53,971 return hook(metadata_directory, config_settings) 2023-09-23T20:30:53,971 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-23T20:30:53,972 File "/tmp/pip-build-env-njm3i2fl/overlay/local/lib/python3.11/dist-packages/poetry/core/masonry/api.py", line 41, in prepare_metadata_for_build_wheel 2023-09-23T20:30:53,972 poetry = Factory().create_poetry(Path(".").resolve(), with_groups=False) 2023-09-23T20:30:53,973 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-23T20:30:53,974 File "/tmp/pip-build-env-njm3i2fl/overlay/local/lib/python3.11/dist-packages/poetry_dynamic_versioning/patch.py", line 26, in alt_poetry_create 2023-09-23T20:30:53,974 name = _get_and_apply_version( 2023-09-23T20:30:53,974 ^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-23T20:30:53,975 File "/tmp/pip-build-env-njm3i2fl/overlay/local/lib/python3.11/dist-packages/poetry_dynamic_versioning/__init__.py", line 472, in _get_and_apply_version 2023-09-23T20:30:53,975 version = _get_version(config, name) 2023-09-23T20:30:53,976 ^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-23T20:30:53,976 File "/tmp/pip-build-env-njm3i2fl/overlay/local/lib/python3.11/dist-packages/poetry_dynamic_versioning/__init__.py", line 307, in _get_version 2023-09-23T20:30:53,977 version = _get_version_from_dunamai(vcs, pattern, config) 2023-09-23T20:30:53,977 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-23T20:30:53,978 File "/tmp/pip-build-env-njm3i2fl/overlay/local/lib/python3.11/dist-packages/poetry_dynamic_versioning/__init__.py", line 259, in _get_version_from_dunamai 2023-09-23T20:30:53,978 return Version.from_vcs( 2023-09-23T20:30:53,979 ^^^^^^^^^^^^^^^^^ 2023-09-23T20:30:53,979 File "/tmp/pip-build-env-njm3i2fl/overlay/local/lib/python3.11/dist-packages/dunamai/__init__.py", line 1904, in from_vcs 2023-09-23T20:30:53,980 return cls._do_vcs_callback( 2023-09-23T20:30:53,981 ^^^^^^^^^^^^^^^^^^^^^ 2023-09-23T20:30:53,982 File "/tmp/pip-build-env-njm3i2fl/overlay/local/lib/python3.11/dist-packages/dunamai/__init__.py", line 1938, in _do_vcs_callback 2023-09-23T20:30:53,983 return callback(**kwargs) 2023-09-23T20:30:53,984 ^^^^^^^^^^^^^^^^^^ 2023-09-23T20:30:53,985 File "/tmp/pip-build-env-njm3i2fl/overlay/local/lib/python3.11/dist-packages/dunamai/__init__.py", line 1060, in from_git 2023-09-23T20:30:53,986 _detect_vcs(vcs) 2023-09-23T20:30:53,987 File "/tmp/pip-build-env-njm3i2fl/overlay/local/lib/python3.11/dist-packages/dunamai/__init__.py", line 355, in _detect_vcs 2023-09-23T20:30:53,987 raise RuntimeError( 2023-09-23T20:30:53,988 RuntimeError: This does not appear to be a Git project 2023-09-23T20:30:54,093 ERROR: [present-rich] Preparing metadata (pyproject.toml) exited with 1 2023-09-23T20:30:54,106 [bold magenta]full command[/]: [blue]/usr/bin/python3 /usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py prepare_metadata_for_build_wheel /tmp/tmpjur2_axv[/] 2023-09-23T20:30:54,107 [bold magenta]cwd[/]: /tmp/pip-wheel-7mdvixd0/biolink-model_26af7188effd4f8bb5f542166ad3a382 2023-09-23T20:30:54,108 Preparing metadata (pyproject.toml): finished with status 'error' 2023-09-23T20:30:54,110 ERROR: [present-rich] metadata generation failed 2023-09-23T20:30:54,115 Exception information: 2023-09-23T20:30:54,115 Traceback (most recent call last): 2023-09-23T20:30:54,115 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata.py", line 35, in generate_metadata 2023-09-23T20:30:54,115 distinfo_dir = backend.prepare_metadata_for_build_wheel(metadata_dir) 2023-09-23T20:30:54,115 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-23T20:30:54,115 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/utils/misc.py", line 718, in prepare_metadata_for_build_wheel 2023-09-23T20:30:54,115 return super().prepare_metadata_for_build_wheel( 2023-09-23T20:30:54,115 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-23T20:30:54,115 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_impl.py", line 186, in prepare_metadata_for_build_wheel 2023-09-23T20:30:54,115 return self._call_hook('prepare_metadata_for_build_wheel', { 2023-09-23T20:30:54,115 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-23T20:30:54,115 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_impl.py", line 311, in _call_hook 2023-09-23T20:30:54,115 self._subprocess_runner( 2023-09-23T20:30:54,115 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/utils/subprocess.py", line 252, in runner 2023-09-23T20:30:54,115 call_subprocess( 2023-09-23T20:30:54,115 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess 2023-09-23T20:30:54,115 raise error 2023-09-23T20:30:54,115 pip._internal.exceptions.InstallationSubprocessError: Preparing metadata (pyproject.toml) exited with 1 2023-09-23T20:30:54,115 2023-09-23T20:30:54,115 The above exception was the direct cause of the following exception: 2023-09-23T20:30:54,115 2023-09-23T20:30:54,115 Traceback (most recent call last): 2023-09-23T20:30:54,115 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper 2023-09-23T20:30:54,115 status = run_func(*args) 2023-09-23T20:30:54,115 ^^^^^^^^^^^^^^^ 2023-09-23T20:30:54,115 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper 2023-09-23T20:30:54,115 return func(self, options, args) 2023-09-23T20:30:54,115 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-23T20:30:54,115 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 147, in run 2023-09-23T20:30:54,115 requirement_set = resolver.resolve(reqs, check_supported_wheels=True) 2023-09-23T20:30:54,115 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-23T20:30:54,115 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 92, in resolve 2023-09-23T20:30:54,115 result = self._result = resolver.resolve( 2023-09-23T20:30:54,115 ^^^^^^^^^^^^^^^^^ 2023-09-23T20:30:54,115 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 546, in resolve 2023-09-23T20:30:54,115 state = resolution.resolve(requirements, max_rounds=max_rounds) 2023-09-23T20:30:54,115 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-23T20:30:54,115 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 397, in resolve 2023-09-23T20:30:54,115 self._add_to_criteria(self.state.criteria, r, parent=None) 2023-09-23T20:30:54,115 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria 2023-09-23T20:30:54,115 if not criterion.candidates: 2023-09-23T20:30:54,115 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/structs.py", line 156, in __bool__ 2023-09-23T20:30:54,115 return bool(self._sequence) 2023-09-23T20:30:54,115 ^^^^^^^^^^^^^^^^^^^^ 2023-09-23T20:30:54,115 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__ 2023-09-23T20:30:54,115 return any(self) 2023-09-23T20:30:54,115 ^^^^^^^^^ 2023-09-23T20:30:54,115 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in 2023-09-23T20:30:54,115 return (c for c in iterator if id(c) not in self._incompatible_ids) 2023-09-23T20:30:54,115 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-23T20:30:54,115 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built 2023-09-23T20:30:54,115 candidate = func() 2023-09-23T20:30:54,115 ^^^^^^ 2023-09-23T20:30:54,115 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 206, in _make_candidate_from_link 2023-09-23T20:30:54,115 self._link_candidate_cache[link] = LinkCandidate( 2023-09-23T20:30:54,115 ^^^^^^^^^^^^^^ 2023-09-23T20:30:54,115 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 293, in __init__ 2023-09-23T20:30:54,115 super().__init__( 2023-09-23T20:30:54,115 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 156, in __init__ 2023-09-23T20:30:54,115 self.dist = self._prepare() 2023-09-23T20:30:54,115 ^^^^^^^^^^^^^^^ 2023-09-23T20:30:54,115 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 225, in _prepare 2023-09-23T20:30:54,115 dist = self._prepare_distribution() 2023-09-23T20:30:54,115 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-23T20:30:54,115 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 304, in _prepare_distribution 2023-09-23T20:30:54,115 return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True) 2023-09-23T20:30:54,115 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-23T20:30:54,115 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 538, in prepare_linked_requirement 2023-09-23T20:30:54,115 return self._prepare_linked_requirement(req, parallel_builds) 2023-09-23T20:30:54,115 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-23T20:30:54,115 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 653, in _prepare_linked_requirement 2023-09-23T20:30:54,115 dist = _get_prepared_distribution( 2023-09-23T20:30:54,115 ^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-23T20:30:54,115 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 69, in _get_prepared_distribution 2023-09-23T20:30:54,115 abstract_dist.prepare_distribution_metadata( 2023-09-23T20:30:54,115 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/distributions/sdist.py", line 61, in prepare_distribution_metadata 2023-09-23T20:30:54,115 self.req.prepare_metadata() 2023-09-23T20:30:54,115 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/req/req_install.py", line 562, in prepare_metadata 2023-09-23T20:30:54,115 self.metadata_directory = generate_metadata( 2023-09-23T20:30:54,115 ^^^^^^^^^^^^^^^^^^ 2023-09-23T20:30:54,115 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata.py", line 37, in generate_metadata 2023-09-23T20:30:54,115 raise MetadataGenerationFailed(package_details=details) from error 2023-09-23T20:30:54,115 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed 2023-09-23T20:30:54,129 Removed biolink-model==3.3.2 from https://files.pythonhosted.org/packages/f3/d7/2beac54baed4edf10f2e15f8c7e109c7f3601e4152d9ad0c7a73fb3cc8a6/biolink-model-3.3.2.tar.gz from build tracker '/tmp/pip-build-tracker-tlf3ozer' 2023-09-23T20:30:54,130 Removed build tracker: '/tmp/pip-build-tracker-tlf3ozer'