2023-09-25T20:55:19,072 Created temporary directory: /tmp/pip-build-tracker-2401rora
2023-09-25T20:55:19,073 Initialized build tracking at /tmp/pip-build-tracker-2401rora
2023-09-25T20:55:19,073 Created build tracker: /tmp/pip-build-tracker-2401rora
2023-09-25T20:55:19,074 Entered build tracker: /tmp/pip-build-tracker-2401rora
2023-09-25T20:55:19,075 Created temporary directory: /tmp/pip-wheel-qaaza5_5
2023-09-25T20:55:19,078 Created temporary directory: /tmp/pip-ephem-wheel-cache-ywwf1efn
2023-09-25T20:55:19,102 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-25T20:55:19,105 2 location(s) to search for versions of moleculekit:
2023-09-25T20:55:19,105 * https://pypi.org/simple/moleculekit/
2023-09-25T20:55:19,105 * https://www.piwheels.org/simple/moleculekit/
2023-09-25T20:55:19,106 Fetching project page and analyzing links: https://pypi.org/simple/moleculekit/
2023-09-25T20:55:19,107 Getting page https://pypi.org/simple/moleculekit/
2023-09-25T20:55:19,108 Found index url https://pypi.org/simple/
2023-09-25T20:55:19,354 Fetched page https://pypi.org/simple/moleculekit/ as application/vnd.pypi.simple.v1+json
2023-09-25T20:55:19,390   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/91/e6/25b6853357dfef8a4026325e420d8213d34c17c078a2f13b60cbb6213ea3/moleculekit-0.1.4-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,391   Found link https://files.pythonhosted.org/packages/13/0f/a200e8e7632d3a521cfc7c15fa4d0270802efce40f98ac5a5cae58385b7e/moleculekit-0.1.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.4
2023-09-25T20:55:19,391   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/9f/a5/eac32fcb2e9ff0d30298aa4cec8e152c95d675c4dd1a1a5d7676986d4d75/moleculekit-0.1.5-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,392   Found link https://files.pythonhosted.org/packages/c5/6f/ae7d1b8513eb23ec0fa8e153c42fda0ee96f9e29c6e4808c5ff78c115e89/moleculekit-0.1.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.5
2023-09-25T20:55:19,393   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/e2/51/0f4e4b95d0d5c16664ede7f2cd31e6d6003e9c940a8fbe28c74de91de627/moleculekit-0.1.6-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,393   Found link https://files.pythonhosted.org/packages/08/fa/bc1b5918a1715901fd0ea1e796de9e6647276943983962616f2ddceb1c3b/moleculekit-0.1.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.6
2023-09-25T20:55:19,394   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/49/59/ddf780e7a574dde727d5db8b93c41bcc3d19436a8ae9f468bad5ea48529e/moleculekit-0.1.7-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,395   Found link https://files.pythonhosted.org/packages/c7/cb/d1b609de2d59d10a60ca74c9d1a044534f608e323dc16a87e5bd77ee0eb0/moleculekit-0.1.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.7
2023-09-25T20:55:19,396   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/5b/a4/59e6017c4e5b99be72d8e0eb6b6442061f338e309d91c25d607162298d11/moleculekit-0.1.8-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,396   Found link https://files.pythonhosted.org/packages/c0/1d/753c7461942457e39fb069504cdc381518a4ef18f486de0a42572236095e/moleculekit-0.1.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.8
2023-09-25T20:55:19,397   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/28/39/e4219020234475a17077f38ebcbdff236872d8e3a0455b376edb847f4141/moleculekit-0.1.9-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,397   Found link https://files.pythonhosted.org/packages/e0/c6/5d47b6257a3d1aca76d635d1dc8fffd6ed712fbe324bfeb2f2da47edda09/moleculekit-0.1.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.9
2023-09-25T20:55:19,398   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/3c/12/42a0a156c8a51b2ef9de7c720cbcd226c1b0a7d13dce7dcdd4c34480e05f/moleculekit-0.1.12-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,399   Found link https://files.pythonhosted.org/packages/12/9d/ef12aeb7165210a6d06f5a735640db6c49cda2597bebb3584e72f7a2aee5/moleculekit-0.1.12.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.12
2023-09-25T20:55:19,400   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/e0/de/ddea29e806547e8743801bd5b44f5f4b62e96a3b6aa1b59e7ae3c183e65d/moleculekit-0.1.14-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,400   Found link https://files.pythonhosted.org/packages/0f/b8/5dce8ade2a03ba18558275d58f1f586fc78b76442ca923e02e05b7aa4638/moleculekit-0.1.14.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.14
2023-09-25T20:55:19,401   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/98/67/c911fd0aab052ed8866739c282be96070bcafee75cad331165f356d0bf11/moleculekit-0.1.15-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,401   Found link https://files.pythonhosted.org/packages/be/5c/b803aa60ac93136e6fce9ab52ec50aec246481c5db76892780152f769d75/moleculekit-0.1.15.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.15
2023-09-25T20:55:19,402   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/4f/30/78d34f8541a5e0e7488b6d59c43b29cf4d9f42467553fb0cee41312409c7/moleculekit-0.1.16-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,402   Found link https://files.pythonhosted.org/packages/d3/39/0774efc740b7e6a6969e084e0eb126483049a60229de80cc09a1a4b78011/moleculekit-0.1.16.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.16
2023-09-25T20:55:19,403   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/ca/d8/f9dd491ee5984f59dbd1206bb41062543e1a1664bb002d4b2675ec3f882c/moleculekit-0.1.17-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,404   Found link https://files.pythonhosted.org/packages/f6/27/b820e1158e448f35830265eeb023ec7d7cc72272136a31ec5365a893174f/moleculekit-0.1.17.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.17
2023-09-25T20:55:19,404   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/0d/df/1d0dfd734e1d67c6ba1a1291b6f530c60eb3a65c25e2990d0fb62c73dbea/moleculekit-0.1.19-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,405   Found link https://files.pythonhosted.org/packages/6e/55/28d041ad7324e063e00ed2e0a5cd91d4c67e6cda3e62c24ab9c3ea2ad5dc/moleculekit-0.1.19.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.19
2023-09-25T20:55:19,406   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/f0/f3/18f3b015e5fdf04c0243d63132d4d29ab807b608bda9cab6de505c060196/moleculekit-0.1.21-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,406   Found link https://files.pythonhosted.org/packages/d7/2f/510d466d4e507523c6f8bb5323a03351e0a9e6422b29ab7a9d7b34101484/moleculekit-0.1.21.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.21
2023-09-25T20:55:19,407   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/2c/83/5bdc26bbc9c0dc6b7fa54260134f5545c6f8c01e50b4cc94de02d0a2f295/moleculekit-0.1.22-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,407   Found link https://files.pythonhosted.org/packages/28/80/3c053d293b0aad5df512b8c7bf1ef111c621ee80bbe08ea83763ca004a85/moleculekit-0.1.22.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.22
2023-09-25T20:55:19,408   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/5d/ec/9e6438a424607cba93fe71b89ef89dbff35369f133ed76ded895861ab290/moleculekit-0.1.23-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,409   Found link https://files.pythonhosted.org/packages/6d/c3/680633af7541d2c7ecf2fde4dc9661f107efaf55688d3f41d15407cb2248/moleculekit-0.1.23.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.23
2023-09-25T20:55:19,410   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/0b/02/f2bbd133b7e76a60bdc1d92d10621ce9f60f8eeaf97ed7dacae2e216cb2b/moleculekit-0.1.24-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,410   Found link https://files.pythonhosted.org/packages/7f/f7/48b8b09fbf6e368925a186ef4cb874ae0abfae6d5b81bd2656502290add5/moleculekit-0.1.24.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.24
2023-09-25T20:55:19,411   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/1e/bd/24146e575547d1fc8bd24b4b7d9a57cbe14c357ebf85d638df6421412465/moleculekit-0.1.26-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,411   Found link https://files.pythonhosted.org/packages/f5/6e/a9dafd4b3b109011d156a6f7c726925669e42435b6049859f3a0a050a87f/moleculekit-0.1.26.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.26
2023-09-25T20:55:19,412   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/fe/63/a0e65b18866805186e3a4ba2b8ece20b73b85ec1ce6b3f8597e0c2508178/moleculekit-0.1.27-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,412   Found link https://files.pythonhosted.org/packages/70/7e/a01a54d9e88eaf00ec47989f360fb98d58e871d500aa28c44b9c7b8bd7ff/moleculekit-0.1.27.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.27
2023-09-25T20:55:19,413   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/f1/db/8f0879b07acae5356393297640e1116c459d28b59d19e1bd328da94e4b7a/moleculekit-0.1.29-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,413   Found link https://files.pythonhosted.org/packages/dc/10/67c6720423554f257425330caf21342c13c59bc86aee634f369b481dad7b/moleculekit-0.1.29.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.29
2023-09-25T20:55:19,414   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/83/f1/2cb963c0a74d919761e8516fe969330c122c9874426ff8eef7834b9b0c62/moleculekit-0.1.30-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,415   Found link https://files.pythonhosted.org/packages/a9/87/cd070158b979d89c02edf2a1deb98ced11e6a442952ed67ebb4f281d6700/moleculekit-0.1.30.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.30
2023-09-25T20:55:19,415   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/cf/c4/f211cc80e281f1ee01040cfa490a65e874a54b5bedf2dfd73e3be6e72d93/moleculekit-0.1.31-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,416   Found link https://files.pythonhosted.org/packages/d7/8b/2b012f3371e5fceb875601e16c83a0ddfd5602d1cdceb953a4b36fc12200/moleculekit-0.1.31.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.31
2023-09-25T20:55:19,417   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/bf/2e/56178883cad4d2429d5cb5fb23d17be42663dea6da428df98f2b70be67a3/moleculekit-0.1.32-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,417   Found link https://files.pythonhosted.org/packages/97/34/992324fd9f1bb4d151b3383f601e3b69810e62c9d3530580ae8b43c4dcca/moleculekit-0.1.32.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.32
2023-09-25T20:55:19,418   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/7e/84/8e678afbcbd29c9b462973571bf3a043a7b5dbf7a98f1ac3dc82c3f5fc91/moleculekit-0.2.0-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,419   Found link https://files.pythonhosted.org/packages/10/f8/dfc9b84d16081239c0b6e3a2896e59db9f8b8617a67b7585e98789942324/moleculekit-0.2.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.0
2023-09-25T20:55:19,419   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/cb/a7/e706e1daa9d60d9ca9a96436564ec0612fe5fc850fdabad6e0c5174d52c5/moleculekit-0.2.1-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,420   Found link https://files.pythonhosted.org/packages/a8/ad/3c01c094324fcaf3a516aa3ab376ae4bec251dc2005f172217368e97b1db/moleculekit-0.2.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.1
2023-09-25T20:55:19,420   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/30/c3/e618404cdeb463f4f5f8fbfa1d5d45a81ea3c31cef86e9c6ca14a3d64589/moleculekit-0.2.2-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,421   Found link https://files.pythonhosted.org/packages/ce/2a/e4f0ea22c4e3be055409fbe8cda7802bd2cd1095926f62f2c78b7f447b46/moleculekit-0.2.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.2
2023-09-25T20:55:19,421   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/3c/c6/baf4c6dafa42a7f055cd29cad8a79b2e99baaf474e8ddcff833e02a8c9a2/moleculekit-0.2.3-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,422   Found link https://files.pythonhosted.org/packages/92/3b/d42fa900fbc359ad0b7806344c2eb303f06336fc6bad439db5550483ce5c/moleculekit-0.2.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.3
2023-09-25T20:55:19,423   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/d7/72/5674ef2a697583774eb66559f23b37026098badcc7e14bb09247c112baec/moleculekit-0.2.4-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,423   Found link https://files.pythonhosted.org/packages/7c/f3/5372063ddc10f57f1ea1aa29ab3f06d98d3d29c22d2a3d0c7c318ff7dc4a/moleculekit-0.2.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.4
2023-09-25T20:55:19,424   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/35/99/9bc21e28d9d4007623055b30fc43d18464649dfa39703ea80e9c32ba4607/moleculekit-0.2.5-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,425   Found link https://files.pythonhosted.org/packages/dd/7a/f6d8ac771d9e4c9117ab098a281231e6c4c3fadbbeafce69ac5b8370f2bd/moleculekit-0.2.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.5
2023-09-25T20:55:19,425   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/97/2d/1b5aeecf49f225f13c39534c7a93181f14bbb295f4b0bb50019d7efda717/moleculekit-0.2.6-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,426   Found link https://files.pythonhosted.org/packages/8a/04/f032c25621eac9ccab21dd25c0cb5d7150a21a5b0cde5ae21adb3e2be933/moleculekit-0.2.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.6
2023-09-25T20:55:19,427   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/7b/c3/6023b75cb8d60607d1932a6f3fa1fee5c99e88b692f25e3ed0072a4812a5/moleculekit-0.2.7-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,427   Found link https://files.pythonhosted.org/packages/a6/68/1eb4fb904763839ec4df4eab490702bd7245a6848ebfb693b165d5fbb153/moleculekit-0.2.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.7
2023-09-25T20:55:19,428   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/a3/85/452591c89b66659eaf24e216aef7818e3061a78bb1fc832f8616808949d4/moleculekit-0.2.8-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,429   Found link https://files.pythonhosted.org/packages/68/e0/0fe1302790061ea9e59370a988d67b877642c45a9e6d725819118cc3aae1/moleculekit-0.2.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.8
2023-09-25T20:55:19,429   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/90/90/238209bf8023d0779c0d4a9592786cc94e69d3dde60b5b17473d57c97b60/moleculekit-0.2.9-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,430   Found link https://files.pythonhosted.org/packages/bd/ad/aa7f2c7343506e17f61f2c4223dc912d4f099fdcc3e1736f393c9c31e118/moleculekit-0.2.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.9
2023-09-25T20:55:19,431   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/40/39/e7c3ea68289cf49ac58a53a55de11c71471a26c55268ce2a11dd3d0f4b1d/moleculekit-0.3.0-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-25T20:55:19,431   Found link https://files.pythonhosted.org/packages/9d/1e/99ffa0d73766a735c3e91d591c92537e37b0024cd9b1d745c4e5933563c1/moleculekit-0.3.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.0
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2023-09-25T20:55:19,432   Found link https://files.pythonhosted.org/packages/13/f9/af3d7677c2eb61bb310ddad301ab47b9c1db2f923b0efad9ce605112aafb/moleculekit-0.3.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.1
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2023-09-25T20:55:19,433   Found link https://files.pythonhosted.org/packages/0d/3f/7743a3ec8c6ed58c5f0c12bf19654ba6275d473044861d9479ff346f8859/moleculekit-0.3.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.2
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2023-09-25T20:55:19,434   Found link https://files.pythonhosted.org/packages/a1/bf/2b3762bf7738dd1850a06eb6330cd8d17c49acaa272d43fc80c7c9c44a04/moleculekit-0.3.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.3
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2023-09-25T20:55:19,437   Found link https://files.pythonhosted.org/packages/18/8a/a376ec94bd0c414528774a510846e3a34afec6356cda3d31d3a044a74a15/moleculekit-0.3.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.5
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2023-09-25T20:55:19,442   Found link https://files.pythonhosted.org/packages/67/47/5f9440683e69c1612d117c957044f665b4e025bffab93251e31444529fa6/moleculekit-0.4.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.4.0
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2023-09-25T20:55:19,451   Found link https://files.pythonhosted.org/packages/31/e6/a052ad91265d7e72fcf32d9335d746bba3c06b23fc5a163960bd36e6dde6/moleculekit-0.5.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.5.2
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2023-09-25T20:55:19,453   Found link https://files.pythonhosted.org/packages/b1/30/da12019468d39b9fc72b300f6bc0cbc4045ad8ccc1b8f25aa9fb7dced289/moleculekit-0.5.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.5.4
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2023-09-25T20:55:19,455   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/3a/53/7ae8cc33411c0f5f83d245abfeabfd81ed123a3cfbf8a500ec4d96648275/moleculekit-0.5.7-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
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2023-09-25T20:55:19,476   Found link https://files.pythonhosted.org/packages/5c/b2/944d529319db190e13234dd2337bff23b7a7c3c1a98b2a95eb08fc802530/moleculekit-0.9.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.7
2023-09-25T20:55:19,477   Found link https://files.pythonhosted.org/packages/42/0a/fbfa3d5c838ad716fdcb9b5ad55bddb6dccd74c5c281ac171be93b0f58e2/moleculekit-0.9.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.8
2023-09-25T20:55:19,478   Found link https://files.pythonhosted.org/packages/15/e0/93b4cc5e997a9e4e01fd39f00548f04e3f068961abba30f82fc04aa828ac/moleculekit-0.9.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.9
2023-09-25T20:55:19,479   Found link https://files.pythonhosted.org/packages/7f/58/2f04c5387c3c23e5c46f71741f7655c380b01c6f88aad7b5e945943c3fd1/moleculekit-0.9.12.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.12
2023-09-25T20:55:19,479   Found link https://files.pythonhosted.org/packages/b5/7c/fde4b7b8c9cd6683036e87727f341a0c9de5dae09f324dfa1bc2aa2a6de0/moleculekit-0.9.13.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.13
2023-09-25T20:55:19,480   Found link https://files.pythonhosted.org/packages/8e/f7/39a1290893da55d759e629ea6d9e2509fe6c3a06538d3f80cca590859647/moleculekit-0.9.14.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.14
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2023-09-25T20:55:19,481   Found link https://files.pythonhosted.org/packages/62/51/f195a9d66dab99b8f6bd30fe5f65f63c65e65ded97c8fd20bf0cda822ee1/moleculekit-0.10.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.10.0
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2023-09-25T20:55:19,483   Found link https://files.pythonhosted.org/packages/fc/d7/f3aa2dd40f165c1b67401587414deb33e80764835dfe2abb16b9b1d167bf/moleculekit-1.0.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.1
2023-09-25T20:55:19,484   Found link https://files.pythonhosted.org/packages/19/54/5ec72761331cfeea3e48a65f0dc30f7c21ec586f6d2b904339c262abafd8/moleculekit-1.0.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.2
2023-09-25T20:55:19,484   Found link https://files.pythonhosted.org/packages/f9/12/d8febc3aa79b72ffa0ea8efb978370f58db848fba030df47ae546bccb298/moleculekit-1.0.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.3
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2023-09-25T20:55:19,486   Found link https://files.pythonhosted.org/packages/28/2f/61d6e171e7b0309a94b3920b2743e5b6990d24a4870a5b1caf39f0e34338/moleculekit-1.0.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.6
2023-09-25T20:55:19,487   Found link https://files.pythonhosted.org/packages/6d/1e/bbd2d882b353e673f44897179ab0b6e76df9c2a657d25d47090dbdce76d3/moleculekit-1.0.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.7
2023-09-25T20:55:19,487   Found link https://files.pythonhosted.org/packages/61/45/acbe2272378c87f0796b1ebcba0673a13acc5ed87eb0d29fa16e1bfe54cf/moleculekit-1.0.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.8
2023-09-25T20:55:19,488   Found link https://files.pythonhosted.org/packages/72/48/3df4bcf3a3e5ca9c0e05e5486c0a7da3b7d6b3ff49830d473b6e72f02443/moleculekit-1.0.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.9
2023-09-25T20:55:19,488   Found link https://files.pythonhosted.org/packages/09/29/7e58bdf57dda487be8ab4c3719ebbf31db17ad65232fc9305a20eaa3c90c/moleculekit-1.1.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.0
2023-09-25T20:55:19,489   Found link https://files.pythonhosted.org/packages/3c/b6/64b6ae76e4b562d453b31fd28678232838949d56f1dafabd12531362de23/moleculekit-1.1.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.1
2023-09-25T20:55:19,490   Found link https://files.pythonhosted.org/packages/15/f8/fb94ef622b57eea44916cbed8a838efcbbd62c9732879ec4864c3abaf3d0/moleculekit-1.1.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.2
2023-09-25T20:55:19,491   Found link https://files.pythonhosted.org/packages/85/87/2264a91838fc8d44f1661b9ae462976e2b9b23f002591db7be9287f51d43/moleculekit-1.1.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.4
2023-09-25T20:55:19,491   Found link https://files.pythonhosted.org/packages/f4/53/156ee257b5781f55228ef884eec2b57cc368dbf37c4654315347af0e7a71/moleculekit-1.1.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.6
2023-09-25T20:55:19,492   Found link https://files.pythonhosted.org/packages/71/3c/15df00803c890b9d17390a31c60fa2c070a88e8a8c33c79ef10ddf023159/moleculekit-1.1.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.7
2023-09-25T20:55:19,493   Found link https://files.pythonhosted.org/packages/eb/2e/c50f42aefc5f3510073bd5059723baff738a5ee171174441586000c444dc/moleculekit-1.1.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.8
2023-09-25T20:55:19,494   Found link https://files.pythonhosted.org/packages/59/b9/6e9913fc67fa6321d5c441eb59a93e257f1fba383848a6bd645a7d427045/moleculekit-1.1.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.9
2023-09-25T20:55:19,494   Found link https://files.pythonhosted.org/packages/06/90/69685dad023515e231d8da7747793f33c497bb62496c4075e518f230da55/moleculekit-1.2.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.0
2023-09-25T20:55:19,495   Found link https://files.pythonhosted.org/packages/1a/07/36426e9820ea0ecff884e15fc9ebe413735a2b22a9212cdcbb9b62e56744/moleculekit-1.2.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.1
2023-09-25T20:55:19,496   Found link https://files.pythonhosted.org/packages/a1/56/2e1ac2fac4f566abf327baf326d17421047e363138c1c132a537a3eaf5ec/moleculekit-1.2.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.2
2023-09-25T20:55:19,496   Found link https://files.pythonhosted.org/packages/cb/28/b8fa8b94edf207d206627fcb18753ce3fad1450d7d5e5b052daa211b226b/moleculekit-1.2.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.4
2023-09-25T20:55:19,497   Found link https://files.pythonhosted.org/packages/cb/c9/8d7c9c427863a8e1be9e5487520f26a4ea63a34e735a3c5598f1e8b43cb4/moleculekit-1.2.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.5
2023-09-25T20:55:19,498   Found link https://files.pythonhosted.org/packages/39/b3/50e46e2780075c4adf93bba603ad047457f3d9cd70a77f4909776ec446b3/moleculekit-1.2.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.7
2023-09-25T20:55:19,498   Found link https://files.pythonhosted.org/packages/29/f1/10cd916b3024b2efe08c06413dff5938859e01c8bc671cde8bf070758031/moleculekit-1.2.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.8
2023-09-25T20:55:19,499   Found link https://files.pythonhosted.org/packages/47/55/207179562e46a3cba4a1cb813c1754be6c5a1664a11d1dcffe89b51c1ca4/moleculekit-1.2.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.9
2023-09-25T20:55:19,499   Found link https://files.pythonhosted.org/packages/2e/1c/a07b4d5f471fc90ba12e88e44675ddbf0ba4b0a658c2fc014491a7a27092/moleculekit-1.3.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.0
2023-09-25T20:55:19,500   Found link https://files.pythonhosted.org/packages/80/9b/d0375ea58246506494224acf560e8d2da623d1635047089316a01ab146a0/moleculekit-1.3.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.1
2023-09-25T20:55:19,501   Found link https://files.pythonhosted.org/packages/f9/f6/5808fddfaeeb3c021514c45f1b896329245c2e1c6218a86b9bc9f1904d7d/moleculekit-1.3.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.3
2023-09-25T20:55:19,502   Found link https://files.pythonhosted.org/packages/0f/87/45be2661273532639b9aef46f7335ef962ac0f4d5a022cad9fae46b3ed76/moleculekit-1.3.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.4
2023-09-25T20:55:19,502   Found link https://files.pythonhosted.org/packages/0b/c2/d5b36c664c2d4f8736b5dbf06b05d9efeeacd4d488125c8feb0e4efb3594/moleculekit-1.3.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.5
2023-09-25T20:55:19,503   Found link https://files.pythonhosted.org/packages/30/3d/7f0577f2f4fd87df9160c6c80c49fe7d025f40b9f25c6b6d9ed0bcd2341f/moleculekit-1.3.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.7
2023-09-25T20:55:19,504   Found link https://files.pythonhosted.org/packages/1a/fd/3788664397288c8169d713da13ae2419a0534a9ee826d1ce718811e27569/moleculekit-1.3.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.8
2023-09-25T20:55:19,504   Found link https://files.pythonhosted.org/packages/fe/a6/b9b3e9ec27de783731911f111354a9d1e6cd766e47aeff934b769a415311/moleculekit-1.3.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.9
2023-09-25T20:55:19,505   Found link https://files.pythonhosted.org/packages/fd/8d/5420b8fc8713c9a27e74eb85aab9b758169f739c0d6aca1540d73582aba6/moleculekit-1.4.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.0
2023-09-25T20:55:19,506   Found link https://files.pythonhosted.org/packages/68/7e/cd023ea3b0a765a65611a8b103d51dbb55fc97bb9df335095d520ad46deb/moleculekit-1.4.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.1
2023-09-25T20:55:19,507   Found link https://files.pythonhosted.org/packages/21/ce/d98ddf9106565632f876b1b853bb23c64534e65884b9d3d73208c7fe17e6/moleculekit-1.4.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.2
2023-09-25T20:55:19,507   Found link https://files.pythonhosted.org/packages/f9/12/68450058da1b4f39328ce41f22cfb5a38717147b3e624cb76b225318dd96/moleculekit-1.4.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.3
2023-09-25T20:55:19,508   Found link https://files.pythonhosted.org/packages/a1/9c/61a877e38393372a16746096dc836e3a24d0fe31240644258396f6ec1dd5/moleculekit-1.4.5-1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.5-1
2023-09-25T20:55:19,509   Found link https://files.pythonhosted.org/packages/65/2b/f8fbac2b196d899066e4d26b78e62adc1f2356734b3de63da153e9b18e44/moleculekit-1.4.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.4.6
2023-09-25T20:55:19,510   Found link https://files.pythonhosted.org/packages/6b/80/69b1d49f78060edafdb9a5e49080f189c6d72a7a2a83f2567f7abfaf9fcb/moleculekit-1.4.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.4.7
2023-09-25T20:55:19,510   Found link https://files.pythonhosted.org/packages/91/bd/4e692bc271e6a957732a20347e43f0388e12ab60df6717a178b628f18fce/moleculekit-1.4.8.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.4.8
2023-09-25T20:55:19,511   Found link https://files.pythonhosted.org/packages/0b/22/49372d8ecca8baa50e08ca3971786e207825556920bd5b19697d085bf681/moleculekit-1.4.9.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.4.9
2023-09-25T20:55:19,512   Found link https://files.pythonhosted.org/packages/3a/52/c87b6f8651063e38a723e8506788475ecf32f2b2e67fcf42739e8737f120/moleculekit-1.5.0.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.0
2023-09-25T20:55:19,513   Found link https://files.pythonhosted.org/packages/e9/64/50b82745c79e8f28fb8c1615e637221dceb4af565af8e785b04b5c9bd7f0/moleculekit-1.5.1.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.1
2023-09-25T20:55:19,514   Found link https://files.pythonhosted.org/packages/3d/18/e249854f20e449b9890eca08ef37ccdb87f719b6ac0db8e9d2ca9c4eb890/moleculekit-1.5.2.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.2
2023-09-25T20:55:19,515   Found link https://files.pythonhosted.org/packages/3f/e8/860f3b89afd29b5ba405ab028f3d49ac22e95557b6b906e475c2f6558df5/moleculekit-1.5.3.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.3
2023-09-25T20:55:19,516   Found link https://files.pythonhosted.org/packages/e7/1e/8f982d3446852e3778250fc8af491eb3ceaf081b891eb7a4936776dfe730/moleculekit-1.5.4.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.4
2023-09-25T20:55:19,517   Found link https://files.pythonhosted.org/packages/46/81/f7be4e086eb469d0fda5d9be51c6fe2107d39c4127f64218774c40f5923a/moleculekit-1.5.5.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.5
2023-09-25T20:55:19,518   Found link https://files.pythonhosted.org/packages/d1/99/5866f661f25b1168804a5c26ab38edd26a7239d91b84c13fb129c1f84ab6/moleculekit-1.5.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.6
2023-09-25T20:55:19,519   Found link https://files.pythonhosted.org/packages/25/45/e228ef66e7b03b1613382490f07c3db31c9713e3878eb9766781076b8209/moleculekit-1.5.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.7
2023-09-25T20:55:19,520   Found link https://files.pythonhosted.org/packages/5e/4a/8e20ee9556cfcdc8c51aac44a054b76db1b9abf8c83124f51521397f7673/moleculekit-1.5.8.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.8
2023-09-25T20:55:19,521   Found link https://files.pythonhosted.org/packages/00/79/eafaf1a45594ebe0f5e3e3a775bb8e4635dd46e63a048cc577a4e3c4c29b/moleculekit-1.6.0.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.0
2023-09-25T20:55:19,522   Found link https://files.pythonhosted.org/packages/c2/66/b802cbaa73639d3fb24d7aca0a21b932bd6b781103c3aa0662fd27dd64e0/moleculekit-1.6.1.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.1
2023-09-25T20:55:19,524   Found link https://files.pythonhosted.org/packages/01/31/1debf4b7c89e0060dc1f7d19ab348e627b9183890a8e443c1ee54ee3bd6c/moleculekit-1.6.4.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.4
2023-09-25T20:55:19,524   Found link https://files.pythonhosted.org/packages/d6/3a/77427acaba2c2b4670a4b94ce5cd161b60ac547e812a6337374265f3272d/moleculekit-1.6.5.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.5
2023-09-25T20:55:19,525   Found link https://files.pythonhosted.org/packages/75/c9/3ed46001d1cc28d02ee2ee30de3377bc39f9545ea0a7b7932b6c31770879/moleculekit-1.6.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.6
2023-09-25T20:55:19,526   Found link https://files.pythonhosted.org/packages/b0/eb/47f199ab494f4a3929e1265222e24dcfce4dc2dde54923d1be8e513bf765/moleculekit-1.6.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.7
2023-09-25T20:55:19,527   Found link https://files.pythonhosted.org/packages/02/62/8710bf8c331f6c5d3320bcd99ce1f53fd72c8ed39767e69fe09127926c58/moleculekit-1.6.8.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.8
2023-09-25T20:55:19,528   Found link https://files.pythonhosted.org/packages/bd/54/7eaec59ff225b186934cbe0ea2e709af1864cac674dc9c8f2e7cf2d8adeb/moleculekit-1.6.9.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.9
2023-09-25T20:55:19,529   Found link https://files.pythonhosted.org/packages/3d/e9/5d17d4e81b5894b9ace33d43b373881813b8a68b0a1365d7590990c5c370/moleculekit-1.7.0.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.0
2023-09-25T20:55:19,529   Found link https://files.pythonhosted.org/packages/4e/3a/29fb1aa0e3792fef88348885348370f39af453fb75d5505a208068d1c4ac/moleculekit-1.7.1.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.1
2023-09-25T20:55:19,530   Found link https://files.pythonhosted.org/packages/4a/13/dd6711d592d27e604c48830300f5596aafa1bbc479dc5eb49ed9797085eb/moleculekit-1.7.2.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.2
2023-09-25T20:55:19,531   Found link https://files.pythonhosted.org/packages/c7/cb/205d8925276863e2892c2c1ae2747cd4834cd3f174521172670ce43b50b8/moleculekit-1.7.3.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.3
2023-09-25T20:55:19,532   Found link https://files.pythonhosted.org/packages/6f/9e/2bce5993679a3666fd12803b93bb9a4daa59922f0ecdd26e9726df5d7f73/moleculekit-1.7.4.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.4
2023-09-25T20:55:19,533   Found link https://files.pythonhosted.org/packages/fa/63/993d55964a5afc9417ca31ab06a7d08f10b8fb38c63157bef0f350b4bb49/moleculekit-1.7.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.6
2023-09-25T20:55:19,534   Found link https://files.pythonhosted.org/packages/9b/3d/351d6444550ae455f20139e1d71ab138449c75b4a9782ac831dc9c6daa76/moleculekit-1.7.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.7
2023-09-25T20:55:19,535   Found link https://files.pythonhosted.org/packages/1b/7a/80d740239c506d7eea7cdba7576c503012556338861c10d5d2908e1912f7/moleculekit-1.7.8.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.8
2023-09-25T20:55:19,536   Found link https://files.pythonhosted.org/packages/05/e0/64dd3801f9b9cd011f8093d85201df3b259bab3502b87b6e37edadea0f21/moleculekit-1.7.9.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.9
2023-09-25T20:55:19,537   Found link https://files.pythonhosted.org/packages/0e/fd/650680f6dcf164b179c8a334c56fc7ba97d71519330f03bdc485307b6a0d/moleculekit-1.7.10.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.10
2023-09-25T20:55:19,538   Found link https://files.pythonhosted.org/packages/37/05/3105db0d4a63b49d0f4534b5e9d6a488b96b83b3aac621224338f3a6aa6b/moleculekit-1.7.12.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.12
2023-09-25T20:55:19,539   Found link https://files.pythonhosted.org/packages/08/ec/48d8122fea93c59592ae22dc29f16496087cdf31064793e6da173fcf2e36/moleculekit-1.7.13.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.13
2023-09-25T20:55:19,540 Fetching project page and analyzing links: https://www.piwheels.org/simple/moleculekit/
2023-09-25T20:55:19,540 Getting page https://www.piwheels.org/simple/moleculekit/
2023-09-25T20:55:19,542 Found index url https://www.piwheels.org/simple/
2023-09-25T20:55:19,723 Fetched page https://www.piwheels.org/simple/moleculekit/ as text/html
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2023-09-25T20:55:19,803   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.5.0-cp39-cp39-linux_armv7l.whl#sha256=2335de6704a494b118481ac750c91de9befd1a0e12629fd0d7b20ca020ab582f (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
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2023-09-25T20:55:19,804   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.4.9-cp39-cp39-linux_armv7l.whl#sha256=e8ded20037d22ac419d05d0a80db0081999eac7f92084cd85a24aef997eb56cd (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
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2023-09-25T20:55:19,807   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.4.6-cp39-cp39-linux_armv7l.whl#sha256=c81af8eb30e31f41a57d6e31c2e4d4a5a6f85041fe9f79dcd843adf62c919a7a (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
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2023-09-25T20:55:19,808   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.14-cp39-cp39-linux_armv7l.whl#sha256=9462e9f87eb4aec5ac63c9df15de09cdce7d94fe44a0708d7ee525e983ff1830 (from https://www.piwheels.org/simple/moleculekit/)
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2023-09-25T20:55:19,809   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.14-cp37-cp37m-linux_armv7l.whl#sha256=5bc2de8230ca38d840e6f86860f469828a1720a95c76726db1ecb07a8af6de91 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,810   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.14-cp37-cp37m-linux_armv6l.whl#sha256=5bc2de8230ca38d840e6f86860f469828a1720a95c76726db1ecb07a8af6de91 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,810   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.13-cp39-cp39-linux_armv7l.whl#sha256=413233b9ea619a276a0cc4911cee59417c2be694ab30c5c5c836a31391e5b6c4 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,811   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.13-cp39-cp39-linux_armv6l.whl#sha256=413233b9ea619a276a0cc4911cee59417c2be694ab30c5c5c836a31391e5b6c4 (from https://www.piwheels.org/simple/moleculekit/)
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2023-09-25T20:55:19,812   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.13-cp37-cp37m-linux_armv6l.whl#sha256=ef137737db23a1f54c74776c99ac718685db863975d888a3e219900b5874fe45 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,812   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.12-cp39-cp39-linux_armv7l.whl#sha256=d75d99aa397ece4f4d163fff8e78e6868ccbab4190016befc567c5f08d1cbbd4 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,813   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.12-cp39-cp39-linux_armv6l.whl#sha256=d75d99aa397ece4f4d163fff8e78e6868ccbab4190016befc567c5f08d1cbbd4 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,814   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.12-cp37-cp37m-linux_armv7l.whl#sha256=a871d3b206f986ddc16b14a1e59904384aea1d6936948be45d6d3d05211637c4 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,814   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.12-cp37-cp37m-linux_armv6l.whl#sha256=a871d3b206f986ddc16b14a1e59904384aea1d6936948be45d6d3d05211637c4 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,815   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp39-cp39-linux_armv7l.whl#sha256=0d0004615c5da8823417816aa8e72f2ac2a2993c01c9ffa07540521dd44cdeb9 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,816   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp39-cp39-linux_armv6l.whl#sha256=0d0004615c5da8823417816aa8e72f2ac2a2993c01c9ffa07540521dd44cdeb9 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,816   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp37-cp37m-linux_armv7l.whl#sha256=66dbff1fb6cecaa00851b6b78480b3d8eb3f5f5d9aae539ad9397ec3dc9b22d8 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,817   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp37-cp37m-linux_armv6l.whl#sha256=66dbff1fb6cecaa00851b6b78480b3d8eb3f5f5d9aae539ad9397ec3dc9b22d8 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,817   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp39-cp39-linux_armv7l.whl#sha256=72aada7099cf1c7fbed38107b64c08622659cb763f35e5f2b75052a08f5cb853 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,818   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp39-cp39-linux_armv6l.whl#sha256=72aada7099cf1c7fbed38107b64c08622659cb763f35e5f2b75052a08f5cb853 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,819   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp37-cp37m-linux_armv7l.whl#sha256=e8d8fc1d3f31a50afae4252a2c403fb5b928eff4452d3954322d0d9b2d5383c5 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,819   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp37-cp37m-linux_armv6l.whl#sha256=e8d8fc1d3f31a50afae4252a2c403fb5b928eff4452d3954322d0d9b2d5383c5 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,820   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp39-cp39-linux_armv7l.whl#sha256=b1bfb9de96ef11fdd768cccd1b894300c470a7389f83c8cca3f42ac636f3dcb7 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,820   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp39-cp39-linux_armv6l.whl#sha256=b1bfb9de96ef11fdd768cccd1b894300c470a7389f83c8cca3f42ac636f3dcb7 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,820   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp37-cp37m-linux_armv7l.whl#sha256=8e98ed7e4f43a05739fbb98f22bc0aeabe5d6a76673b8883a4fa88c3762ba080 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,821   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp37-cp37m-linux_armv6l.whl#sha256=8e98ed7e4f43a05739fbb98f22bc0aeabe5d6a76673b8883a4fa88c3762ba080 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,821   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp39-cp39-linux_armv7l.whl#sha256=de2e9946d86d3e6deb732605b7b9804d3ee229e0d1e869093c26731ff1cf6e49 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,822   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp39-cp39-linux_armv6l.whl#sha256=de2e9946d86d3e6deb732605b7b9804d3ee229e0d1e869093c26731ff1cf6e49 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,823   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp37-cp37m-linux_armv7l.whl#sha256=881a09b6497cca181f77a3388648b0ec90974f79d8c81513666ac38dbed69842 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,823   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp37-cp37m-linux_armv6l.whl#sha256=881a09b6497cca181f77a3388648b0ec90974f79d8c81513666ac38dbed69842 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,824   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp39-cp39-linux_armv7l.whl#sha256=f42eb6c315d3242355c8e36090f1f77ed92b768cefb595178e81eb89fa5a79d5 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,824   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp39-cp39-linux_armv6l.whl#sha256=f42eb6c315d3242355c8e36090f1f77ed92b768cefb595178e81eb89fa5a79d5 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,825   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp37-cp37m-linux_armv7l.whl#sha256=30013f87dd3dc0c9b99cc9862ac0d0be618fe63faa7c7c4623be9cdd86396624 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,826   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp37-cp37m-linux_armv6l.whl#sha256=30013f87dd3dc0c9b99cc9862ac0d0be618fe63faa7c7c4623be9cdd86396624 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,827   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp39-cp39-linux_armv7l.whl#sha256=e123a257574ee84a677c70d154c26fb75cdf29cfb3f9491b309d8ad47e37f3c0 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,827   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp39-cp39-linux_armv6l.whl#sha256=e123a257574ee84a677c70d154c26fb75cdf29cfb3f9491b309d8ad47e37f3c0 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,827   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp37-cp37m-linux_armv7l.whl#sha256=a30adf43b2972eb0763ce00b18dc4dffb61a74ac1da2391652cf53f73dba67ce (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,828   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp37-cp37m-linux_armv6l.whl#sha256=a30adf43b2972eb0763ce00b18dc4dffb61a74ac1da2391652cf53f73dba67ce (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,828   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp39-cp39-linux_armv7l.whl#sha256=c666ea91f79ecf6c6d99ca251e7f938e7e82208a01a91d39b827ba64eee4ce41 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,829   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp39-cp39-linux_armv6l.whl#sha256=c666ea91f79ecf6c6d99ca251e7f938e7e82208a01a91d39b827ba64eee4ce41 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,829   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp37-cp37m-linux_armv7l.whl#sha256=286faceca4683f35ce8e9aeefefdecee1c02150dfc9b7deb62015ce17f3f557c (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,830   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp37-cp37m-linux_armv6l.whl#sha256=286faceca4683f35ce8e9aeefefdecee1c02150dfc9b7deb62015ce17f3f557c (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,831   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp39-cp39-linux_armv7l.whl#sha256=390edc2399f77605c97d9fc8db3b63f282ba297c67fe9514db91ebec945fa2d7 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,832   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp39-cp39-linux_armv6l.whl#sha256=390edc2399f77605c97d9fc8db3b63f282ba297c67fe9514db91ebec945fa2d7 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,832   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp37-cp37m-linux_armv7l.whl#sha256=e7e709fde2552ca5cb602bf420ed89d740b1e75bd32c879ee33ffe3b747b109a (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,833   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp37-cp37m-linux_armv6l.whl#sha256=e7e709fde2552ca5cb602bf420ed89d740b1e75bd32c879ee33ffe3b747b109a (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,833   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp39-cp39-linux_armv7l.whl#sha256=aed227f0c49804421d71b6c949c0d24367a74207b8f855c59e4e73a89b5a93ed (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,834   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp39-cp39-linux_armv6l.whl#sha256=aed227f0c49804421d71b6c949c0d24367a74207b8f855c59e4e73a89b5a93ed (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,835   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp37-cp37m-linux_armv7l.whl#sha256=ad67f1f622d2a2a49358691e3e784e48277aa09cf1f984ed60e847892a3413d7 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,835   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp37-cp37m-linux_armv6l.whl#sha256=ad67f1f622d2a2a49358691e3e784e48277aa09cf1f984ed60e847892a3413d7 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,836   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp39-cp39-linux_armv7l.whl#sha256=7f76858d50e6bb4611f32f053be82003c583d01ad83aa44b6f220dce89a7856f (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,836   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp39-cp39-linux_armv6l.whl#sha256=7f76858d50e6bb4611f32f053be82003c583d01ad83aa44b6f220dce89a7856f (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,836   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp37-cp37m-linux_armv7l.whl#sha256=ab05d1bc06d0d249cbb4871d51e6dca4b9e8474288d86326bd7dd603b9b99820 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,837   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp37-cp37m-linux_armv6l.whl#sha256=ab05d1bc06d0d249cbb4871d51e6dca4b9e8474288d86326bd7dd603b9b99820 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,838   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp39-cp39-linux_armv7l.whl#sha256=0f20a256b92c66dbaac370cf1a01b885b10f1371beacaec65ec35ce8ac935afb (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,838   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp39-cp39-linux_armv6l.whl#sha256=0f20a256b92c66dbaac370cf1a01b885b10f1371beacaec65ec35ce8ac935afb (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,839   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp37-cp37m-linux_armv7l.whl#sha256=34809734c61c1fcc4c4de1857dadfb84e726cbfe0dd0b60fce249166d29a3bb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,839   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp37-cp37m-linux_armv6l.whl#sha256=34809734c61c1fcc4c4de1857dadfb84e726cbfe0dd0b60fce249166d29a3bb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,840   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp39-cp39-linux_armv7l.whl#sha256=a8a1cb7f5b851f5f58273e5d12aa871e5086f6bfd844f33f0b4bf20c83f429ec (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,841   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp39-cp39-linux_armv6l.whl#sha256=a8a1cb7f5b851f5f58273e5d12aa871e5086f6bfd844f33f0b4bf20c83f429ec (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,841   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp37-cp37m-linux_armv7l.whl#sha256=93f57ab9c01697fb9f28ed39e4c5c32828e862bf410f556fdbc43c7a72825cb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,842   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp37-cp37m-linux_armv6l.whl#sha256=93f57ab9c01697fb9f28ed39e4c5c32828e862bf410f556fdbc43c7a72825cb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,843   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp39-cp39-linux_armv7l.whl#sha256=de79a8099ce28793ecc89cf8dfbcb6542a270d00290c96903280f704e2ec22e7 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,843   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp39-cp39-linux_armv6l.whl#sha256=de79a8099ce28793ecc89cf8dfbcb6542a270d00290c96903280f704e2ec22e7 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,843   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp37-cp37m-linux_armv7l.whl#sha256=25d1bdfd25f377e21e8a522d9f3cd2ce3896cf857957c8ec876c69f4de8d53f5 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,844   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp37-cp37m-linux_armv6l.whl#sha256=25d1bdfd25f377e21e8a522d9f3cd2ce3896cf857957c8ec876c69f4de8d53f5 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,844   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp39-cp39-linux_armv7l.whl#sha256=c1983524eecc8638287c4a1e09dda961635e861bf6f9342dc566a9f9a4c0b771 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,845   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp39-cp39-linux_armv6l.whl#sha256=c1983524eecc8638287c4a1e09dda961635e861bf6f9342dc566a9f9a4c0b771 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,845   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp37-cp37m-linux_armv7l.whl#sha256=2d64935710bb05965f486f3bd9f258d8d479dc5c00dc1535ba5e285c8786dcf1 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,846   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp37-cp37m-linux_armv6l.whl#sha256=2d64935710bb05965f486f3bd9f258d8d479dc5c00dc1535ba5e285c8786dcf1 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,846   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp39-cp39-linux_armv7l.whl#sha256=24cfa04ff95ecb68f6d261ba4176e979846a0424ba781a1e314ca233c5206ae7 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,847   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp39-cp39-linux_armv6l.whl#sha256=24cfa04ff95ecb68f6d261ba4176e979846a0424ba781a1e314ca233c5206ae7 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,848   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp37-cp37m-linux_armv7l.whl#sha256=3fa03496ffbd230b85c032f9e1ba3129efbd4c37f6509c6cfef258ce69ed6925 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,848   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp37-cp37m-linux_armv6l.whl#sha256=3fa03496ffbd230b85c032f9e1ba3129efbd4c37f6509c6cfef258ce69ed6925 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,849   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp39-cp39-linux_armv7l.whl#sha256=41b03e81b9cd75c716643741a53b8d4d5aeb1633b5e07091c1a7355b6b44d233 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,849   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp39-cp39-linux_armv6l.whl#sha256=41b03e81b9cd75c716643741a53b8d4d5aeb1633b5e07091c1a7355b6b44d233 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,850   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp37-cp37m-linux_armv7l.whl#sha256=584155aa2ddfa324fcd872934f8b25a296c40b34797209bb754f4a641a5b27eb (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,851   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp37-cp37m-linux_armv6l.whl#sha256=584155aa2ddfa324fcd872934f8b25a296c40b34797209bb754f4a641a5b27eb (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,851   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp39-cp39-linux_armv7l.whl#sha256=1b6361e98ea6ec0f3a7a4cce9ec9569a117c26deb95d0ce2bcea9d6f1f38d503 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,851   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp39-cp39-linux_armv6l.whl#sha256=1b6361e98ea6ec0f3a7a4cce9ec9569a117c26deb95d0ce2bcea9d6f1f38d503 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,852   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp37-cp37m-linux_armv7l.whl#sha256=b0ac5fea57fee9d962de25688ffde053c705daa15588886ea6aa7d5ab0986077 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,852   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp37-cp37m-linux_armv6l.whl#sha256=b0ac5fea57fee9d962de25688ffde053c705daa15588886ea6aa7d5ab0986077 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,853   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.9-cp39-cp39-linux_armv7l.whl#sha256=223cbac9f53d732be3d157f8e68c124c79439d057ec079594c681d7c5327f342 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,854   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.9-cp39-cp39-linux_armv6l.whl#sha256=223cbac9f53d732be3d157f8e68c124c79439d057ec079594c681d7c5327f342 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,854   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.9-cp37-cp37m-linux_armv7l.whl#sha256=a6ee5c9ac5b2648bb87ca08a6491d955004770b58180224d6d24bdb8cec17458 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,855   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.9-cp37-cp37m-linux_armv6l.whl#sha256=a6ee5c9ac5b2648bb87ca08a6491d955004770b58180224d6d24bdb8cec17458 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,855   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp39-cp39-linux_armv7l.whl#sha256=c18e44dbd9cf047134d440ff4fbb18722a3fdb0f348d431e8b7bed7dd398bd6e (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,856   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp39-cp39-linux_armv6l.whl#sha256=c18e44dbd9cf047134d440ff4fbb18722a3fdb0f348d431e8b7bed7dd398bd6e (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,857   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp37-cp37m-linux_armv7l.whl#sha256=19e3b710f4af1a0cb530060979c4216d87f0bd8a71e9f41824cf3565abbcbbdb (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,857   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp37-cp37m-linux_armv6l.whl#sha256=19e3b710f4af1a0cb530060979c4216d87f0bd8a71e9f41824cf3565abbcbbdb (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,858   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.7-cp39-cp39-linux_armv7l.whl#sha256=53a48e2a1781a9ae00e1f905778bad58715b08cff2ed4605148de1e481c9d50e (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,858   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.7-cp39-cp39-linux_armv6l.whl#sha256=53a48e2a1781a9ae00e1f905778bad58715b08cff2ed4605148de1e481c9d50e (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,859   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.7-cp37-cp37m-linux_armv7l.whl#sha256=8e63b6afb6715f46aae20e77b81958cdc652a7b1b6d294c5d559f7f06d5a5106 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,859   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.7-cp37-cp37m-linux_armv6l.whl#sha256=8e63b6afb6715f46aae20e77b81958cdc652a7b1b6d294c5d559f7f06d5a5106 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,860   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.6-cp39-cp39-linux_armv7l.whl#sha256=d5e470ed8514697a92a69cccdc99ddf6da22ddde2cc24b3e6ed949645778116f (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,860   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.6-cp39-cp39-linux_armv6l.whl#sha256=d5e470ed8514697a92a69cccdc99ddf6da22ddde2cc24b3e6ed949645778116f (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,861   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.6-cp37-cp37m-linux_armv7l.whl#sha256=a85d0cfa7da9e3593e97f1c63822eb0a9733744fdeb19c3bbd09e1f4242e1d91 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,861   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.6-cp37-cp37m-linux_armv6l.whl#sha256=a85d0cfa7da9e3593e97f1c63822eb0a9733744fdeb19c3bbd09e1f4242e1d91 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,862   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp311-cp311-linux_armv7l.whl#sha256=901c091adc4fc8b89c9de8f139d92aeffbfb6dc91799f2f9019f61646044ddd7 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,863   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp311-cp311-linux_armv6l.whl#sha256=901c091adc4fc8b89c9de8f139d92aeffbfb6dc91799f2f9019f61646044ddd7 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,863   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp39-cp39-linux_armv7l.whl#sha256=55bb6252b29c31ce9b46ca6dc68ed50a4fbe0e44a1b3f8f6f57b13faf1c939c1 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,864   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp39-cp39-linux_armv6l.whl#sha256=55bb6252b29c31ce9b46ca6dc68ed50a4fbe0e44a1b3f8f6f57b13faf1c939c1 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,864   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp37-cp37m-linux_armv7l.whl#sha256=2670c23b960766e0d52c54881bf4a8a663345f17190e380f84a273d51c8cdb3f (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,865   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp37-cp37m-linux_armv6l.whl#sha256=2670c23b960766e0d52c54881bf4a8a663345f17190e380f84a273d51c8cdb3f (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,866   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.4-cp39-cp39-linux_armv7l.whl#sha256=8c575ac103cbab0a21e8ac9ee5d64f45634da6dcfa639e87f54e4afd333fe22f (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,866   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.4-cp39-cp39-linux_armv6l.whl#sha256=8c575ac103cbab0a21e8ac9ee5d64f45634da6dcfa639e87f54e4afd333fe22f (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,867   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.4-cp37-cp37m-linux_armv7l.whl#sha256=c59aab79b14443a5c4194c3a08c69a2f1a98abedfda3217c0b15e5f694cb8dc3 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,867   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.4-cp37-cp37m-linux_armv6l.whl#sha256=c59aab79b14443a5c4194c3a08c69a2f1a98abedfda3217c0b15e5f694cb8dc3 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,868   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.6.7-cp39-cp39-linux_armv7l.whl#sha256=6975400d079ca432444a3145d286b6b9c52b60c61acfbb1ad67be92f2b7a4585 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,868   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.6.7-cp39-cp39-linux_armv6l.whl#sha256=6975400d079ca432444a3145d286b6b9c52b60c61acfbb1ad67be92f2b7a4585 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,869   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.6.7-cp37-cp37m-linux_armv7l.whl#sha256=e6497cd1fa524aee3c9d431fc1556e29e1ff896a6c49eca8572fb6ffc399cd6c (from https://www.piwheels.org/simple/moleculekit/)
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2023-09-25T20:55:19,873   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.4.6-py3-none-any.whl#sha256=aa0c660454f157d45a5709a2fe3ec7e6c79af7be1dc5866ab3497475f2197d8d (from https://www.piwheels.org/simple/moleculekit/)
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2023-09-25T20:55:19,876   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.3.1-py3-none-any.whl#sha256=b5d47dfce102b3af0001276b5d6fda0f055e2ef4f0076a06286d3b5e4f2361b4 (from https://www.piwheels.org/simple/moleculekit/)
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2023-09-25T20:55:19,877   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.2.9-py3-none-any.whl#sha256=76a22c44b710351a9d3c94d7e7c1d96c61e90251004b2a34cdcc92280d423a09 (from https://www.piwheels.org/simple/moleculekit/)
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2023-09-25T20:55:19,888   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.21-py3-none-any.whl#sha256=3f591427a4c43521256cd46422de7c64268ec392e356b7ff3dbb8c0bc5e0c686 (from https://www.piwheels.org/simple/moleculekit/)
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2023-09-25T20:55:19,889   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.17-py3-none-any.whl#sha256=cd99998c6c3ee48df7148cec7161f3696beede842d4e93bb9da19fa9e2c6c459 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,890   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.16-py3-none-any.whl#sha256=8045990a2fc7c805a4ab8244abe9eae67ac92495cbce12f1c9e8b0daa26a77b1 (from https://www.piwheels.org/simple/moleculekit/)
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2023-09-25T20:55:19,891   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.12-py3-none-any.whl#sha256=8d96fbe0cf32ec0d217201a2f3274aedc42fb18f06b218394d4be0bfee25181a (from https://www.piwheels.org/simple/moleculekit/)
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2023-09-25T20:55:19,892   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.7-py3-none-any.whl#sha256=899ef09b80e1ad2e3931cb2023fae09cfeecd45b83fade6c8e8739126ca67a20 (from https://www.piwheels.org/simple/moleculekit/)
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2023-09-25T20:55:19,894   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.5-py3-none-any.whl#sha256=2f111e31b3f90e63ca0154c528585208b8bd41a065aa0078325683f4b36eacec (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,894   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.4-py3-none-any.whl#sha256=5784491ff294e145a00311f8239aaa0b92c12605db0508ee3e10469b80d4cadd (from https://www.piwheels.org/simple/moleculekit/)
2023-09-25T20:55:19,895 Skipping link: not a file: https://www.piwheels.org/simple/moleculekit/
2023-09-25T20:55:19,896 Skipping link: not a file: https://pypi.org/simple/moleculekit/
2023-09-25T20:55:19,935 Given no hashes to check 1 links for project 'moleculekit': discarding no candidates
2023-09-25T20:55:19,953 Collecting moleculekit==1.7.4
2023-09-25T20:55:19,956   Created temporary directory: /tmp/pip-unpack-tj8ba5fy
2023-09-25T20:55:20,196   Downloading moleculekit-1.7.4.tar.gz (6.1 MB)
2023-09-25T20:55:22,808   Added moleculekit==1.7.4 from https://files.pythonhosted.org/packages/6f/9e/2bce5993679a3666fd12803b93bb9a4daa59922f0ecdd26e9726df5d7f73/moleculekit-1.7.4.tar.gz to build tracker '/tmp/pip-build-tracker-2401rora'
2023-09-25T20:55:22,816   Created temporary directory: /tmp/pip-build-env-l1o8vx8g
2023-09-25T20:55:22,821   Installing build dependencies: started
2023-09-25T20:55:22,822   Running command pip subprocess to install build dependencies
2023-09-25T20:55:24,014   Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2023-09-25T20:55:24,499   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-25T20:55:26,041   Collecting setuptools
2023-09-25T20:55:26,042     Obtaining dependency information for setuptools from https://files.pythonhosted.org/packages/bb/26/7945080113158354380a12ce26873dd6c1ebd88d47f5bc24e2c5bb38c16a/setuptools-68.2.2-py3-none-any.whl.metadata
2023-09-25T20:55:26,048     Using cached setuptools-68.2.2-py3-none-any.whl.metadata (6.3 kB)
2023-09-25T20:55:26,759     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/3a/be/650f9c091ef71cb01d735775d554e068752d3ff63d7943b26316dc401749/numpy-1.21.2.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2023-09-25T20:55:26,767     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/5f/d6/ad58ded26556eaeaa8c971e08b6466f17c4ac4d786cd3d800e26ce59cc01/numpy-1.21.3.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2023-09-25T20:55:26,774     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/fb/48/b0708ebd7718a8933f0d3937513ef8ef2f4f04529f1f66ca86d873043921/numpy-1.21.4.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2023-09-25T20:55:26,780     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/c2/a8/a924a09492bdfee8c2ec3094d0a13f2799800b4fdc9c890738aeeb12c72e/numpy-1.21.5.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2023-09-25T20:55:26,787     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/45/b7/de7b8e67f2232c26af57c205aaad29fe17754f793404f59c8a730c7a191a/numpy-1.21.6.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2023-09-25T20:55:27,164   Collecting numpy>=1.18.5
2023-09-25T20:55:28,035     Using cached https://www.piwheels.org/simple/numpy/numpy-1.25.2-cp311-cp311-linux_armv7l.whl (12.5 MB)
2023-09-25T20:55:29,775   Collecting Cython>=0.29.21
2023-09-25T20:55:29,776     Obtaining dependency information for Cython>=0.29.21 from https://files.pythonhosted.org/packages/03/e9/9cc0c4f0d8a566089d096254cd25168a0db02dd047863a7f995d8d3eefa7/Cython-3.0.2-py2.py3-none-any.whl.metadata
2023-09-25T20:55:29,782     Using cached Cython-3.0.2-py2.py3-none-any.whl.metadata (3.1 kB)
2023-09-25T20:55:29,852   Collecting toml
2023-09-25T20:55:29,866     Using cached https://www.piwheels.org/simple/toml/toml-0.10.2-py2.py3-none-any.whl (16 kB)
2023-09-25T20:55:29,961   Collecting versioneer[toml]==0.28
2023-09-25T20:55:29,975     Downloading https://www.piwheels.org/simple/versioneer/versioneer-0.28-py3-none-any.whl (45 kB)
2023-09-25T20:55:29,993        ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 45.3/45.3 kB 4.2 MB/s eta 0:00:00
2023-09-25T20:55:30,259   Using cached setuptools-68.2.2-py3-none-any.whl (807 kB)
2023-09-25T20:55:30,294   Using cached Cython-3.0.2-py2.py3-none-any.whl (1.2 MB)
2023-09-25T20:55:32,961   Installing collected packages: versioneer, toml, setuptools, numpy, Cython
2023-09-25T20:55:32,991     Creating /tmp/pip-build-env-l1o8vx8g/overlay/local/bin
2023-09-25T20:55:32,994     changing mode of /tmp/pip-build-env-l1o8vx8g/overlay/local/bin/versioneer to 755
2023-09-25T20:55:44,778     changing mode of /tmp/pip-build-env-l1o8vx8g/overlay/local/bin/f2py to 755
2023-09-25T20:55:44,780     changing mode of /tmp/pip-build-env-l1o8vx8g/overlay/local/bin/f2py3 to 755
2023-09-25T20:55:44,782     changing mode of /tmp/pip-build-env-l1o8vx8g/overlay/local/bin/f2py3.11 to 755
2023-09-25T20:55:48,225     changing mode of /tmp/pip-build-env-l1o8vx8g/overlay/local/bin/cygdb to 755
2023-09-25T20:55:48,228     changing mode of /tmp/pip-build-env-l1o8vx8g/overlay/local/bin/cython to 755
2023-09-25T20:55:48,230     changing mode of /tmp/pip-build-env-l1o8vx8g/overlay/local/bin/cythonize to 755
2023-09-25T20:55:48,275   Successfully installed Cython-3.0.2 numpy-1.25.2 setuptools-68.2.2 toml-0.10.2 versioneer-0.28
2023-09-25T20:55:48,970   Installing build dependencies: finished with status 'done'
2023-09-25T20:55:48,973   Getting requirements to build wheel: started
2023-09-25T20:55:48,974   Running command Getting requirements to build wheel
2023-09-25T20:56:48,209   Compiling moleculekit/interactions/hbonds/hbonds.pyx because it changed.
2023-09-25T20:56:48,209   Compiling moleculekit/interactions/pipi/pipi.pyx because it changed.
2023-09-25T20:56:48,210   Compiling moleculekit/interactions/cationpi/cationpi.pyx because it changed.
2023-09-25T20:56:48,210   Compiling moleculekit/interactions/sigmahole/sigmahole.pyx because it changed.
2023-09-25T20:56:48,210   Compiling moleculekit/wrapping/wrapping.pyx because it changed.
2023-09-25T20:56:48,211   Compiling moleculekit/bondguesser_utils/bondguesser_utils.pyx because it changed.
2023-09-25T20:56:48,211   Compiling moleculekit/atomselect_utils/atomselect_utils.pyx because it changed.
2023-09-25T20:56:48,212   Compiling moleculekit/distance_utils/distance_utils.pyx because it changed.
2023-09-25T20:56:48,212   Compiling moleculekit/occupancy_utils/occupancy_utils.pyx because it changed.
2023-09-25T20:56:48,213   Compiling moleculekit/xtc_utils/xtc.pyx because it changed.
2023-09-25T20:56:48,213   Compiling moleculekit/tmalign/tmalign_util.pyx because it changed.
2023-09-25T20:56:48,214   [ 1/11] Cythonizing moleculekit/atomselect_utils/atomselect_utils.pyx
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2023-09-25T20:56:48,476   running egg_info
2023-09-25T20:56:48,481   writing moleculekit.egg-info/PKG-INFO
2023-09-25T20:56:48,484   writing dependency_links to moleculekit.egg-info/dependency_links.txt
2023-09-25T20:56:48,486   writing requirements to moleculekit.egg-info/requires.txt
2023-09-25T20:56:48,488   writing top-level names to moleculekit.egg-info/top_level.txt
2023-09-25T20:56:48,509   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,509   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,510   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,510   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,511   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,512   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,513   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,513   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,513   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,514   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,514   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,515   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,515   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,516   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,516   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,517   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,517   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,518   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,518   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,519   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,519   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,520   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,520   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,521   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,522   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,522   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,522   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,523   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,523   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,524   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,524   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,524   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,525   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,526   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,527   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,528   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,529   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,529   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,530   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,530   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,531   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,532   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,532   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,533   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,533   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,534   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,534   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,534   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,535   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,535   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,536   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,536   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,537   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,537   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,538   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:48,538   reading manifest file 'moleculekit.egg-info/SOURCES.txt'
2023-09-25T20:56:48,566   reading manifest template 'MANIFEST.in'
2023-09-25T20:56:48,779   no previously-included directories found matching 'moleculekit/test-data'
2023-09-25T20:56:48,781   no previously-included directories found matching 'moleculekit/tests'
2023-09-25T20:56:48,782   no previously-included directories found matching 'package'
2023-09-25T20:56:48,782   adding license file 'LICENSE'
2023-09-25T20:56:48,796   writing manifest file 'moleculekit.egg-info/SOURCES.txt'
2023-09-25T20:56:49,804   Getting requirements to build wheel: finished with status 'done'
2023-09-25T20:56:49,817   Installing backend dependencies: started
2023-09-25T20:56:49,819   Running command pip subprocess to install backend dependencies
2023-09-25T20:56:51,031   Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2023-09-25T20:56:51,575   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-25T20:56:52,081   Collecting wheel
2023-09-25T20:56:52,098     Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB)
2023-09-25T20:56:54,288   Installing collected packages: wheel
2023-09-25T20:56:54,508     Creating /tmp/pip-build-env-l1o8vx8g/normal/local/bin
2023-09-25T20:56:54,510     changing mode of /tmp/pip-build-env-l1o8vx8g/normal/local/bin/wheel to 755
2023-09-25T20:56:54,521   Successfully installed wheel-0.41.2
2023-09-25T20:56:55,034   Installing backend dependencies: finished with status 'done'
2023-09-25T20:56:55,036   Created temporary directory: /tmp/pip-modern-metadata-m4i118xy
2023-09-25T20:56:55,038   Preparing metadata (pyproject.toml): started
2023-09-25T20:56:55,039   Running command Preparing metadata (pyproject.toml)
2023-09-25T20:56:57,279   running dist_info
2023-09-25T20:56:57,280   creating /tmp/pip-modern-metadata-m4i118xy/moleculekit.egg-info
2023-09-25T20:56:57,286   writing /tmp/pip-modern-metadata-m4i118xy/moleculekit.egg-info/PKG-INFO
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2023-09-25T20:56:57,316   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,316   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,317   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,317   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,318   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
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2023-09-25T20:56:57,320   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,321   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,321   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
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2023-09-25T20:56:57,324   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,325   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,325   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,326   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,326   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,327   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,327   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,328   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,328   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,329   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,330   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,330   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,331   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,331   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,332   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,333   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,333   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,334   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,334   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,335   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,335   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,335   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,336   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,336   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,337   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,337   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,338   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,338   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,339   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,339   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,340   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,340   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,340   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,341   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,342   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,342   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,343   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,343   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,343   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,344   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:56:57,344   reading manifest file '/tmp/pip-modern-metadata-m4i118xy/moleculekit.egg-info/SOURCES.txt'
2023-09-25T20:56:57,345   reading manifest template 'MANIFEST.in'
2023-09-25T20:56:57,569   no previously-included directories found matching 'moleculekit/test-data'
2023-09-25T20:56:57,569   no previously-included directories found matching 'moleculekit/tests'
2023-09-25T20:56:57,570   no previously-included directories found matching 'package'
2023-09-25T20:56:57,571   adding license file 'LICENSE'
2023-09-25T20:56:57,581   writing manifest file '/tmp/pip-modern-metadata-m4i118xy/moleculekit.egg-info/SOURCES.txt'
2023-09-25T20:56:57,588   creating '/tmp/pip-modern-metadata-m4i118xy/moleculekit-1.7.4.dist-info'
2023-09-25T20:56:57,807   Preparing metadata (pyproject.toml): finished with status 'done'
2023-09-25T20:56:57,813   Source in /tmp/pip-wheel-qaaza5_5/moleculekit_a494eae7f9a94a6f848589b08d3ead77 has version 1.7.4, which satisfies requirement moleculekit==1.7.4 from https://files.pythonhosted.org/packages/6f/9e/2bce5993679a3666fd12803b93bb9a4daa59922f0ecdd26e9726df5d7f73/moleculekit-1.7.4.tar.gz
2023-09-25T20:56:57,814   Removed moleculekit==1.7.4 from https://files.pythonhosted.org/packages/6f/9e/2bce5993679a3666fd12803b93bb9a4daa59922f0ecdd26e9726df5d7f73/moleculekit-1.7.4.tar.gz from build tracker '/tmp/pip-build-tracker-2401rora'
2023-09-25T20:56:57,819 Created temporary directory: /tmp/pip-unpack-eqoiawwc
2023-09-25T20:56:57,821 Created temporary directory: /tmp/pip-unpack-ndkt3g50
2023-09-25T20:56:57,828 Building wheels for collected packages: moleculekit
2023-09-25T20:56:57,833   Created temporary directory: /tmp/pip-wheel-w1s5b0mk
2023-09-25T20:56:57,833   Destination directory: /tmp/pip-wheel-w1s5b0mk
2023-09-25T20:56:57,835   Building wheel for moleculekit (pyproject.toml): started
2023-09-25T20:56:57,837   Running command Building wheel for moleculekit (pyproject.toml)
2023-09-25T20:56:59,962   running bdist_wheel
2023-09-25T20:56:59,977   running build
2023-09-25T20:56:59,978   running build_py
2023-09-25T20:56:59,985   creating build
2023-09-25T20:56:59,986   creating build/lib.linux-armv7l-cpython-311
2023-09-25T20:56:59,987   creating build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-25T20:56:59,988   copying moleculekit/periodictable.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-25T20:56:59,992   copying moleculekit/home.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-25T20:56:59,993   copying moleculekit/rcsb.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-25T20:56:59,995   copying moleculekit/pymolgraphics.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-25T20:56:59,997   copying moleculekit/bondguesser.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-25T20:56:59,999   copying moleculekit/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-25T20:57:00,000   copying moleculekit/molecule.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-25T20:57:00,004   copying moleculekit/version.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-25T20:57:00,006   copying moleculekit/writers.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-25T20:57:00,008   copying moleculekit/distance.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-25T20:57:00,010   copying moleculekit/vmdviewer.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-25T20:57:00,012   copying moleculekit/vmdgraphics.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-25T20:57:00,014   copying moleculekit/util.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-25T20:57:00,017   copying moleculekit/readers.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-25T20:57:00,021   copying moleculekit/dihedral.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-25T20:57:00,022   copying moleculekit/align.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-25T20:57:00,024   copying moleculekit/viewer.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-25T20:57:00,026   copying moleculekit/config.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-25T20:57:00,028   copying moleculekit/rdkitintegration.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-25T20:57:00,030   copying moleculekit/_version.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-25T20:57:00,031   copying moleculekit/opm.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-25T20:57:00,034   creating build/lib.linux-armv7l-cpython-311/moleculekit/ply
2023-09-25T20:57:00,035   copying moleculekit/ply/yacc.py -> build/lib.linux-armv7l-cpython-311/moleculekit/ply
2023-09-25T20:57:00,039   copying moleculekit/ply/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/ply
2023-09-25T20:57:00,040   copying moleculekit/ply/lex.py -> build/lib.linux-armv7l-cpython-311/moleculekit/ply
2023-09-25T20:57:00,044   creating build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-09-25T20:57:00,045   copying moleculekit/tools/atomtyper.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-09-25T20:57:00,047   copying moleculekit/tools/voxeldescriptors.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-09-25T20:57:00,050   copying moleculekit/tools/preparation.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-09-25T20:57:00,053   copying moleculekit/tools/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-09-25T20:57:00,055   copying moleculekit/tools/docking.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-09-25T20:57:00,057   copying moleculekit/tools/sequencestructuralalignment.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-09-25T20:57:00,059   copying moleculekit/tools/detect.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-09-25T20:57:00,061   copying moleculekit/tools/autosegment.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-09-25T20:57:00,063   copying moleculekit/tools/graphalignment.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-09-25T20:57:00,065   copying moleculekit/tools/crystalpacking.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-09-25T20:57:00,068   copying moleculekit/tools/preparation_customres.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-09-25T20:57:00,070   copying moleculekit/tools/moleculechecks.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-09-25T20:57:00,072   copying moleculekit/tools/hhblitsprofile.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-09-25T20:57:00,075   creating build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-25T20:57:00,076   copying moleculekit/projections/projection.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-25T20:57:00,078   copying moleculekit/projections/metriccoordinate.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-25T20:57:00,080   copying moleculekit/projections/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-25T20:57:00,081   copying moleculekit/projections/metrictmscore.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-25T20:57:00,083   copying moleculekit/projections/metricgyration.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-25T20:57:00,085   copying moleculekit/projections/metricshell.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-25T20:57:00,087   copying moleculekit/projections/util.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-25T20:57:00,089   copying moleculekit/projections/metricdihedral.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-25T20:57:00,091   copying moleculekit/projections/metricplumed2.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-25T20:57:00,094   copying moleculekit/projections/metricdistance.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-25T20:57:00,096   copying moleculekit/projections/metricsecondarystructure.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-25T20:57:00,098   copying moleculekit/projections/metricrmsd.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-25T20:57:00,100   copying moleculekit/projections/metricsasa.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-25T20:57:00,102   copying moleculekit/projections/metricsphericalcoordinate.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-25T20:57:00,104   copying moleculekit/projections/metricfluctuation.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-25T20:57:00,107   creating build/lib.linux-armv7l-cpython-311/moleculekit/pdbx
2023-09-25T20:57:00,108   copying moleculekit/pdbx/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx
2023-09-25T20:57:00,110   creating build/lib.linux-armv7l-cpython-311/moleculekit/interactions
2023-09-25T20:57:00,111   copying moleculekit/interactions/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions
2023-09-25T20:57:00,113   copying moleculekit/interactions/interactions.py -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions
2023-09-25T20:57:00,117   creating build/lib.linux-armv7l-cpython-311/moleculekit/atomselect
2023-09-25T20:57:00,117   copying moleculekit/atomselect/languageparser.py -> build/lib.linux-armv7l-cpython-311/moleculekit/atomselect
2023-09-25T20:57:00,120   copying moleculekit/atomselect/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/atomselect
2023-09-25T20:57:00,121   copying moleculekit/atomselect/analyze.py -> build/lib.linux-armv7l-cpython-311/moleculekit/atomselect
2023-09-25T20:57:00,123   copying moleculekit/atomselect/atomselect.py -> build/lib.linux-armv7l-cpython-311/moleculekit/atomselect
2023-09-25T20:57:00,126   creating build/lib.linux-armv7l-cpython-311/moleculekit/smallmol
2023-09-25T20:57:00,127   copying moleculekit/smallmol/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol
2023-09-25T20:57:00,129   copying moleculekit/smallmol/smallmollib.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol
2023-09-25T20:57:00,132   copying moleculekit/smallmol/smallmol.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol
2023-09-25T20:57:00,134   copying moleculekit/smallmol/util.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol
2023-09-25T20:57:00,136   copying moleculekit/smallmol/test_smallmollib.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol
2023-09-25T20:57:00,138   copying moleculekit/smallmol/test_smallmol.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol
2023-09-25T20:57:00,141   creating build/lib.linux-armv7l-cpython-311/moleculekit/tools/obabel_tools
2023-09-25T20:57:00,142   copying moleculekit/tools/obabel_tools/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools/obabel_tools
2023-09-25T20:57:00,144   copying moleculekit/tools/obabel_tools/obabel_cli.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools/obabel_tools
2023-09-25T20:57:00,146   creating build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests
2023-09-25T20:57:00,147   copying moleculekit/pdbx/tests/PdbxReaderTests.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests
2023-09-25T20:57:00,149   copying moleculekit/pdbx/tests/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests
2023-09-25T20:57:00,150   copying moleculekit/pdbx/tests/PdbxWriterTests.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests
2023-09-25T20:57:00,152   copying moleculekit/pdbx/tests/PdbxReadWriteTests.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests
2023-09-25T20:57:00,155   creating build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/writer
2023-09-25T20:57:00,155   copying moleculekit/pdbx/writer/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/writer
2023-09-25T20:57:00,157   copying moleculekit/pdbx/writer/PdbxWriter.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/writer
2023-09-25T20:57:00,159   creating build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader
2023-09-25T20:57:00,160   copying moleculekit/pdbx/reader/PdbxReader.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader
2023-09-25T20:57:00,163   copying moleculekit/pdbx/reader/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader
2023-09-25T20:57:00,165   copying moleculekit/pdbx/reader/PdbxContainers.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader
2023-09-25T20:57:00,168   copying moleculekit/pdbx/reader/PdbxParser.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader
2023-09-25T20:57:00,171   creating build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools
2023-09-25T20:57:00,172   copying moleculekit/smallmol/tools/clustering.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools
2023-09-25T20:57:00,175   copying moleculekit/smallmol/tools/restrainedembed.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools
2023-09-25T20:57:00,177   copying moleculekit/smallmol/tools/test_tools.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools
2023-09-25T20:57:00,180   copying moleculekit/smallmol/tools/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools
2023-09-25T20:57:00,181   running egg_info
2023-09-25T20:57:00,187   writing moleculekit.egg-info/PKG-INFO
2023-09-25T20:57:00,190   writing dependency_links to moleculekit.egg-info/dependency_links.txt
2023-09-25T20:57:00,191   writing requirements to moleculekit.egg-info/requires.txt
2023-09-25T20:57:00,192   writing top-level names to moleculekit.egg-info/top_level.txt
2023-09-25T20:57:00,204   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,204   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,205   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,205   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,206   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,207   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,208   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,208   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,209   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,209   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,210   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,210   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,210   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,211   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,211   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,212   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,213   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,213   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,214   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,214   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,215   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,216   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,216   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,217   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,218   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,218   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,219   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,219   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,219   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,220   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,220   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,221   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,221   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,222   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,222   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,223   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,223   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,224   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,224   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,225   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,226   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,226   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,227   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,227   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,228   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,228   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,229   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,229   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,229   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,230   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,231   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,231   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,232   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,232   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,233   dependency /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-25T20:57:00,233   reading manifest file 'moleculekit.egg-info/SOURCES.txt'
2023-09-25T20:57:00,234   reading manifest template 'MANIFEST.in'
2023-09-25T20:57:00,436   no previously-included directories found matching 'moleculekit/test-data'
2023-09-25T20:57:00,437   no previously-included directories found matching 'moleculekit/tests'
2023-09-25T20:57:00,438   no previously-included directories found matching 'package'
2023-09-25T20:57:00,438   adding license file 'LICENSE'
2023-09-25T20:57:00,452   writing manifest file 'moleculekit.egg-info/SOURCES.txt'
2023-09-25T20:57:00,460   /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.atomselect_utils' is absent from the `packages` configuration.
2023-09-25T20:57:00,461   !!

2023-09-25T20:57:00,462           ********************************************************************************
2023-09-25T20:57:00,463           ############################
2023-09-25T20:57:00,463           # Package would be ignored #
2023-09-25T20:57:00,464           ############################
2023-09-25T20:57:00,465           Python recognizes 'moleculekit.atomselect_utils' as an importable package[^1],
2023-09-25T20:57:00,465           but it is absent from setuptools' `packages` configuration.

2023-09-25T20:57:00,467           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-25T20:57:00,467           package, please make sure that 'moleculekit.atomselect_utils' is explicitly added
2023-09-25T20:57:00,467           to the `packages` configuration field.

2023-09-25T20:57:00,468           Alternatively, you can also rely on setuptools' discovery methods
2023-09-25T20:57:00,469           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-25T20:57:00,469           instead of `find_packages(...)`/`find:`).

2023-09-25T20:57:00,470           You can read more about "package discovery" on setuptools documentation page:

2023-09-25T20:57:00,471           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-25T20:57:00,471           If you don't want 'moleculekit.atomselect_utils' to be distributed and are
2023-09-25T20:57:00,472           already explicitly excluding 'moleculekit.atomselect_utils' via
2023-09-25T20:57:00,472           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-25T20:57:00,473           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-25T20:57:00,473           combination with a more fine grained `package-data` configuration.

2023-09-25T20:57:00,474           You can read more about "package data files" on setuptools documentation page:

2023-09-25T20:57:00,475           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-25T20:57:00,477           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-25T20:57:00,478                 even if it does not contain any `.py` files.
2023-09-25T20:57:00,478                 On the other hand, currently there is no concept of package data
2023-09-25T20:57:00,479                 directory, all directories are treated like packages.
2023-09-25T20:57:00,479           ********************************************************************************

2023-09-25T20:57:00,481   !!
2023-09-25T20:57:00,481     check.warn(importable)
2023-09-25T20:57:00,482   /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.bondguesser_utils' is absent from the `packages` configuration.
2023-09-25T20:57:00,483   !!

2023-09-25T20:57:00,484           ********************************************************************************
2023-09-25T20:57:00,484           ############################
2023-09-25T20:57:00,485           # Package would be ignored #
2023-09-25T20:57:00,485           ############################
2023-09-25T20:57:00,486           Python recognizes 'moleculekit.bondguesser_utils' as an importable package[^1],
2023-09-25T20:57:00,487           but it is absent from setuptools' `packages` configuration.

2023-09-25T20:57:00,488           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-25T20:57:00,488           package, please make sure that 'moleculekit.bondguesser_utils' is explicitly added
2023-09-25T20:57:00,489           to the `packages` configuration field.

2023-09-25T20:57:00,490           Alternatively, you can also rely on setuptools' discovery methods
2023-09-25T20:57:00,490           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-25T20:57:00,491           instead of `find_packages(...)`/`find:`).

2023-09-25T20:57:00,492           You can read more about "package discovery" on setuptools documentation page:

2023-09-25T20:57:00,493           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-25T20:57:00,495           If you don't want 'moleculekit.bondguesser_utils' to be distributed and are
2023-09-25T20:57:00,495           already explicitly excluding 'moleculekit.bondguesser_utils' via
2023-09-25T20:57:00,496           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-25T20:57:00,496           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-25T20:57:00,497           combination with a more fine grained `package-data` configuration.

2023-09-25T20:57:00,497           You can read more about "package data files" on setuptools documentation page:

2023-09-25T20:57:00,498           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-25T20:57:00,499           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-25T20:57:00,500                 even if it does not contain any `.py` files.
2023-09-25T20:57:00,500                 On the other hand, currently there is no concept of package data
2023-09-25T20:57:00,500                 directory, all directories are treated like packages.
2023-09-25T20:57:00,501           ********************************************************************************

2023-09-25T20:57:00,501   !!
2023-09-25T20:57:00,502     check.warn(importable)
2023-09-25T20:57:00,502   /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.distance_utils' is absent from the `packages` configuration.
2023-09-25T20:57:00,502   !!

2023-09-25T20:57:00,503           ********************************************************************************
2023-09-25T20:57:00,504           ############################
2023-09-25T20:57:00,504           # Package would be ignored #
2023-09-25T20:57:00,505           ############################
2023-09-25T20:57:00,505           Python recognizes 'moleculekit.distance_utils' as an importable package[^1],
2023-09-25T20:57:00,506           but it is absent from setuptools' `packages` configuration.

2023-09-25T20:57:00,507           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-25T20:57:00,507           package, please make sure that 'moleculekit.distance_utils' is explicitly added
2023-09-25T20:57:00,508           to the `packages` configuration field.

2023-09-25T20:57:00,509           Alternatively, you can also rely on setuptools' discovery methods
2023-09-25T20:57:00,509           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-25T20:57:00,510           instead of `find_packages(...)`/`find:`).

2023-09-25T20:57:00,511           You can read more about "package discovery" on setuptools documentation page:

2023-09-25T20:57:00,512           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-25T20:57:00,513           If you don't want 'moleculekit.distance_utils' to be distributed and are
2023-09-25T20:57:00,513           already explicitly excluding 'moleculekit.distance_utils' via
2023-09-25T20:57:00,514           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-25T20:57:00,514           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-25T20:57:00,515           combination with a more fine grained `package-data` configuration.

2023-09-25T20:57:00,516           You can read more about "package data files" on setuptools documentation page:

2023-09-25T20:57:00,517           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-25T20:57:00,519           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-25T20:57:00,520                 even if it does not contain any `.py` files.
2023-09-25T20:57:00,520                 On the other hand, currently there is no concept of package data
2023-09-25T20:57:00,521                 directory, all directories are treated like packages.
2023-09-25T20:57:00,521           ********************************************************************************

2023-09-25T20:57:00,528   !!
2023-09-25T20:57:00,537     check.warn(importable)
2023-09-25T20:57:00,542   /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.interactions.cationpi' is absent from the `packages` configuration.
2023-09-25T20:57:00,542   !!

2023-09-25T20:57:00,543           ********************************************************************************
2023-09-25T20:57:00,543           ############################
2023-09-25T20:57:00,544           # Package would be ignored #
2023-09-25T20:57:00,544           ############################
2023-09-25T20:57:00,545           Python recognizes 'moleculekit.interactions.cationpi' as an importable package[^1],
2023-09-25T20:57:00,545           but it is absent from setuptools' `packages` configuration.

2023-09-25T20:57:00,546           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-25T20:57:00,546           package, please make sure that 'moleculekit.interactions.cationpi' is explicitly added
2023-09-25T20:57:00,547           to the `packages` configuration field.

2023-09-25T20:57:00,548           Alternatively, you can also rely on setuptools' discovery methods
2023-09-25T20:57:00,548           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-25T20:57:00,548           instead of `find_packages(...)`/`find:`).

2023-09-25T20:57:00,549           You can read more about "package discovery" on setuptools documentation page:

2023-09-25T20:57:00,550           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-25T20:57:00,551           If you don't want 'moleculekit.interactions.cationpi' to be distributed and are
2023-09-25T20:57:00,552           already explicitly excluding 'moleculekit.interactions.cationpi' via
2023-09-25T20:57:00,554           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-25T20:57:00,555           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-25T20:57:00,561           combination with a more fine grained `package-data` configuration.

2023-09-25T20:57:00,566           You can read more about "package data files" on setuptools documentation page:

2023-09-25T20:57:00,567           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-25T20:57:00,569           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-25T20:57:00,570                 even if it does not contain any `.py` files.
2023-09-25T20:57:00,571                 On the other hand, currently there is no concept of package data
2023-09-25T20:57:00,575                 directory, all directories are treated like packages.
2023-09-25T20:57:00,576           ********************************************************************************

2023-09-25T20:57:00,580   !!
2023-09-25T20:57:00,582     check.warn(importable)
2023-09-25T20:57:00,582   /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.interactions.hbonds' is absent from the `packages` configuration.
2023-09-25T20:57:00,583   !!

2023-09-25T20:57:00,585           ********************************************************************************
2023-09-25T20:57:00,586           ############################
2023-09-25T20:57:00,586           # Package would be ignored #
2023-09-25T20:57:00,587           ############################
2023-09-25T20:57:00,588           Python recognizes 'moleculekit.interactions.hbonds' as an importable package[^1],
2023-09-25T20:57:00,589           but it is absent from setuptools' `packages` configuration.

2023-09-25T20:57:00,590           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-25T20:57:00,591           package, please make sure that 'moleculekit.interactions.hbonds' is explicitly added
2023-09-25T20:57:00,591           to the `packages` configuration field.

2023-09-25T20:57:00,593           Alternatively, you can also rely on setuptools' discovery methods
2023-09-25T20:57:00,594           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-25T20:57:00,597           instead of `find_packages(...)`/`find:`).

2023-09-25T20:57:00,600           You can read more about "package discovery" on setuptools documentation page:

2023-09-25T20:57:00,600           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-25T20:57:00,601           If you don't want 'moleculekit.interactions.hbonds' to be distributed and are
2023-09-25T20:57:00,602           already explicitly excluding 'moleculekit.interactions.hbonds' via
2023-09-25T20:57:00,602           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-25T20:57:00,603           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-25T20:57:00,603           combination with a more fine grained `package-data` configuration.

2023-09-25T20:57:00,604           You can read more about "package data files" on setuptools documentation page:

2023-09-25T20:57:00,605           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-25T20:57:00,606           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-25T20:57:00,607                 even if it does not contain any `.py` files.
2023-09-25T20:57:00,607                 On the other hand, currently there is no concept of package data
2023-09-25T20:57:00,608                 directory, all directories are treated like packages.
2023-09-25T20:57:00,608           ********************************************************************************

2023-09-25T20:57:00,609   !!
2023-09-25T20:57:00,611     check.warn(importable)
2023-09-25T20:57:00,615   /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.interactions.pipi' is absent from the `packages` configuration.
2023-09-25T20:57:00,621   !!

2023-09-25T20:57:00,623           ********************************************************************************
2023-09-25T20:57:00,624           ############################
2023-09-25T20:57:00,624           # Package would be ignored #
2023-09-25T20:57:00,625           ############################
2023-09-25T20:57:00,625           Python recognizes 'moleculekit.interactions.pipi' as an importable package[^1],
2023-09-25T20:57:00,626           but it is absent from setuptools' `packages` configuration.

2023-09-25T20:57:00,627           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-25T20:57:00,627           package, please make sure that 'moleculekit.interactions.pipi' is explicitly added
2023-09-25T20:57:00,628           to the `packages` configuration field.

2023-09-25T20:57:00,629           Alternatively, you can also rely on setuptools' discovery methods
2023-09-25T20:57:00,629           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-25T20:57:00,630           instead of `find_packages(...)`/`find:`).

2023-09-25T20:57:00,631           You can read more about "package discovery" on setuptools documentation page:

2023-09-25T20:57:00,632           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-25T20:57:00,633           If you don't want 'moleculekit.interactions.pipi' to be distributed and are
2023-09-25T20:57:00,633           already explicitly excluding 'moleculekit.interactions.pipi' via
2023-09-25T20:57:00,634           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-25T20:57:00,634           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-25T20:57:00,635           combination with a more fine grained `package-data` configuration.

2023-09-25T20:57:00,636           You can read more about "package data files" on setuptools documentation page:

2023-09-25T20:57:00,637           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-25T20:57:00,639           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-25T20:57:00,640                 even if it does not contain any `.py` files.
2023-09-25T20:57:00,640                 On the other hand, currently there is no concept of package data
2023-09-25T20:57:00,641                 directory, all directories are treated like packages.
2023-09-25T20:57:00,641           ********************************************************************************

2023-09-25T20:57:00,642   !!
2023-09-25T20:57:00,642     check.warn(importable)
2023-09-25T20:57:00,643   /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.interactions.sigmahole' is absent from the `packages` configuration.
2023-09-25T20:57:00,643   !!

2023-09-25T20:57:00,644           ********************************************************************************
2023-09-25T20:57:00,644           ############################
2023-09-25T20:57:00,645           # Package would be ignored #
2023-09-25T20:57:00,645           ############################
2023-09-25T20:57:00,646           Python recognizes 'moleculekit.interactions.sigmahole' as an importable package[^1],
2023-09-25T20:57:00,646           but it is absent from setuptools' `packages` configuration.

2023-09-25T20:57:00,647           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-25T20:57:00,648           package, please make sure that 'moleculekit.interactions.sigmahole' is explicitly added
2023-09-25T20:57:00,648           to the `packages` configuration field.

2023-09-25T20:57:00,649           Alternatively, you can also rely on setuptools' discovery methods
2023-09-25T20:57:00,650           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-25T20:57:00,650           instead of `find_packages(...)`/`find:`).

2023-09-25T20:57:00,652           You can read more about "package discovery" on setuptools documentation page:

2023-09-25T20:57:00,653           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-25T20:57:00,654           If you don't want 'moleculekit.interactions.sigmahole' to be distributed and are
2023-09-25T20:57:00,655           already explicitly excluding 'moleculekit.interactions.sigmahole' via
2023-09-25T20:57:00,656           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-25T20:57:00,656           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-25T20:57:00,657           combination with a more fine grained `package-data` configuration.

2023-09-25T20:57:00,658           You can read more about "package data files" on setuptools documentation page:

2023-09-25T20:57:00,659           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-25T20:57:00,661           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-25T20:57:00,661                 even if it does not contain any `.py` files.
2023-09-25T20:57:00,662                 On the other hand, currently there is no concept of package data
2023-09-25T20:57:00,662                 directory, all directories are treated like packages.
2023-09-25T20:57:00,663           ********************************************************************************

2023-09-25T20:57:00,664   !!
2023-09-25T20:57:00,665     check.warn(importable)
2023-09-25T20:57:00,665   /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.occupancy_utils' is absent from the `packages` configuration.
2023-09-25T20:57:00,666   !!

2023-09-25T20:57:00,667           ********************************************************************************
2023-09-25T20:57:00,668           ############################
2023-09-25T20:57:00,668           # Package would be ignored #
2023-09-25T20:57:00,669           ############################
2023-09-25T20:57:00,669           Python recognizes 'moleculekit.occupancy_utils' as an importable package[^1],
2023-09-25T20:57:00,670           but it is absent from setuptools' `packages` configuration.

2023-09-25T20:57:00,671           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-25T20:57:00,671           package, please make sure that 'moleculekit.occupancy_utils' is explicitly added
2023-09-25T20:57:00,672           to the `packages` configuration field.

2023-09-25T20:57:00,672           Alternatively, you can also rely on setuptools' discovery methods
2023-09-25T20:57:00,673           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-25T20:57:00,673           instead of `find_packages(...)`/`find:`).

2023-09-25T20:57:00,674           You can read more about "package discovery" on setuptools documentation page:

2023-09-25T20:57:00,675           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-25T20:57:00,676           If you don't want 'moleculekit.occupancy_utils' to be distributed and are
2023-09-25T20:57:00,676           already explicitly excluding 'moleculekit.occupancy_utils' via
2023-09-25T20:57:00,677           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-25T20:57:00,677           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-25T20:57:00,678           combination with a more fine grained `package-data` configuration.

2023-09-25T20:57:00,679           You can read more about "package data files" on setuptools documentation page:

2023-09-25T20:57:00,679           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-25T20:57:00,681           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-25T20:57:00,682                 even if it does not contain any `.py` files.
2023-09-25T20:57:00,683                 On the other hand, currently there is no concept of package data
2023-09-25T20:57:00,683                 directory, all directories are treated like packages.
2023-09-25T20:57:00,684           ********************************************************************************

2023-09-25T20:57:00,685   !!
2023-09-25T20:57:00,686     check.warn(importable)
2023-09-25T20:57:00,687   /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.share' is absent from the `packages` configuration.
2023-09-25T20:57:00,687   !!

2023-09-25T20:57:00,688           ********************************************************************************
2023-09-25T20:57:00,689           ############################
2023-09-25T20:57:00,690           # Package would be ignored #
2023-09-25T20:57:00,690           ############################
2023-09-25T20:57:00,691           Python recognizes 'moleculekit.share' as an importable package[^1],
2023-09-25T20:57:00,691           but it is absent from setuptools' `packages` configuration.

2023-09-25T20:57:00,693           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-25T20:57:00,693           package, please make sure that 'moleculekit.share' is explicitly added
2023-09-25T20:57:00,694           to the `packages` configuration field.

2023-09-25T20:57:00,695           Alternatively, you can also rely on setuptools' discovery methods
2023-09-25T20:57:00,695           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-25T20:57:00,696           instead of `find_packages(...)`/`find:`).

2023-09-25T20:57:00,697           You can read more about "package discovery" on setuptools documentation page:

2023-09-25T20:57:00,698           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-25T20:57:00,700           If you don't want 'moleculekit.share' to be distributed and are
2023-09-25T20:57:00,700           already explicitly excluding 'moleculekit.share' via
2023-09-25T20:57:00,701           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-25T20:57:00,702           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-25T20:57:00,702           combination with a more fine grained `package-data` configuration.

2023-09-25T20:57:00,703           You can read more about "package data files" on setuptools documentation page:

2023-09-25T20:57:00,704           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-25T20:57:00,705           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-25T20:57:00,706                 even if it does not contain any `.py` files.
2023-09-25T20:57:00,706                 On the other hand, currently there is no concept of package data
2023-09-25T20:57:00,706                 directory, all directories are treated like packages.
2023-09-25T20:57:00,707           ********************************************************************************

2023-09-25T20:57:00,708   !!
2023-09-25T20:57:00,708     check.warn(importable)
2023-09-25T20:57:00,709   /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.share.atomselect' is absent from the `packages` configuration.
2023-09-25T20:57:00,709   !!

2023-09-25T20:57:00,710           ********************************************************************************
2023-09-25T20:57:00,711           ############################
2023-09-25T20:57:00,711           # Package would be ignored #
2023-09-25T20:57:00,712           ############################
2023-09-25T20:57:00,712           Python recognizes 'moleculekit.share.atomselect' as an importable package[^1],
2023-09-25T20:57:00,713           but it is absent from setuptools' `packages` configuration.

2023-09-25T20:57:00,714           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-25T20:57:00,714           package, please make sure that 'moleculekit.share.atomselect' is explicitly added
2023-09-25T20:57:00,715           to the `packages` configuration field.

2023-09-25T20:57:00,716           Alternatively, you can also rely on setuptools' discovery methods
2023-09-25T20:57:00,716           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-25T20:57:00,717           instead of `find_packages(...)`/`find:`).

2023-09-25T20:57:00,718           You can read more about "package discovery" on setuptools documentation page:

2023-09-25T20:57:00,719           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-25T20:57:00,720           If you don't want 'moleculekit.share.atomselect' to be distributed and are
2023-09-25T20:57:00,721           already explicitly excluding 'moleculekit.share.atomselect' via
2023-09-25T20:57:00,721           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-25T20:57:00,722           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-25T20:57:00,722           combination with a more fine grained `package-data` configuration.

2023-09-25T20:57:00,723           You can read more about "package data files" on setuptools documentation page:

2023-09-25T20:57:00,725           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-25T20:57:00,726           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-25T20:57:00,727                 even if it does not contain any `.py` files.
2023-09-25T20:57:00,728                 On the other hand, currently there is no concept of package data
2023-09-25T20:57:00,740                 directory, all directories are treated like packages.
2023-09-25T20:57:00,745           ********************************************************************************

2023-09-25T20:57:00,753   !!
2023-09-25T20:57:00,762     check.warn(importable)
2023-09-25T20:57:00,793   /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.share.pdb2pqr.residues' is absent from the `packages` configuration.
2023-09-25T20:57:00,806   !!

2023-09-25T20:57:00,857           ********************************************************************************
2023-09-25T20:57:00,869           ############################
2023-09-25T20:57:00,874           # Package would be ignored #
2023-09-25T20:57:00,874           ############################
2023-09-25T20:57:00,875           Python recognizes 'moleculekit.share.pdb2pqr.residues' as an importable package[^1],
2023-09-25T20:57:00,875           but it is absent from setuptools' `packages` configuration.

2023-09-25T20:57:00,876           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-25T20:57:00,877           package, please make sure that 'moleculekit.share.pdb2pqr.residues' is explicitly added
2023-09-25T20:57:00,877           to the `packages` configuration field.

2023-09-25T20:57:00,878           Alternatively, you can also rely on setuptools' discovery methods
2023-09-25T20:57:00,878           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-25T20:57:00,879           instead of `find_packages(...)`/`find:`).

2023-09-25T20:57:00,880           You can read more about "package discovery" on setuptools documentation page:

2023-09-25T20:57:00,881           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-25T20:57:00,882           If you don't want 'moleculekit.share.pdb2pqr.residues' to be distributed and are
2023-09-25T20:57:00,882           already explicitly excluding 'moleculekit.share.pdb2pqr.residues' via
2023-09-25T20:57:00,882           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-25T20:57:00,883           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-25T20:57:00,884           combination with a more fine grained `package-data` configuration.

2023-09-25T20:57:00,885           You can read more about "package data files" on setuptools documentation page:

2023-09-25T20:57:00,886           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-25T20:57:00,887           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-25T20:57:00,888                 even if it does not contain any `.py` files.
2023-09-25T20:57:00,888                 On the other hand, currently there is no concept of package data
2023-09-25T20:57:00,889                 directory, all directories are treated like packages.
2023-09-25T20:57:00,889           ********************************************************************************

2023-09-25T20:57:00,890   !!
2023-09-25T20:57:00,891     check.warn(importable)
2023-09-25T20:57:00,891   /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.tmalign' is absent from the `packages` configuration.
2023-09-25T20:57:00,892   !!

2023-09-25T20:57:00,893           ********************************************************************************
2023-09-25T20:57:00,893           ############################
2023-09-25T20:57:00,894           # Package would be ignored #
2023-09-25T20:57:00,895           ############################
2023-09-25T20:57:00,895           Python recognizes 'moleculekit.tmalign' as an importable package[^1],
2023-09-25T20:57:00,896           but it is absent from setuptools' `packages` configuration.

2023-09-25T20:57:00,897           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-25T20:57:00,897           package, please make sure that 'moleculekit.tmalign' is explicitly added
2023-09-25T20:57:00,898           to the `packages` configuration field.

2023-09-25T20:57:00,899           Alternatively, you can also rely on setuptools' discovery methods
2023-09-25T20:57:00,900           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-25T20:57:00,900           instead of `find_packages(...)`/`find:`).

2023-09-25T20:57:00,901           You can read more about "package discovery" on setuptools documentation page:

2023-09-25T20:57:00,902           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-25T20:57:00,903           If you don't want 'moleculekit.tmalign' to be distributed and are
2023-09-25T20:57:00,903           already explicitly excluding 'moleculekit.tmalign' via
2023-09-25T20:57:00,904           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-25T20:57:00,904           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-25T20:57:00,905           combination with a more fine grained `package-data` configuration.

2023-09-25T20:57:00,906           You can read more about "package data files" on setuptools documentation page:

2023-09-25T20:57:00,907           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-25T20:57:00,908           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-25T20:57:00,908                 even if it does not contain any `.py` files.
2023-09-25T20:57:00,909                 On the other hand, currently there is no concept of package data
2023-09-25T20:57:00,909                 directory, all directories are treated like packages.
2023-09-25T20:57:00,910           ********************************************************************************

2023-09-25T20:57:00,910   !!
2023-09-25T20:57:00,911     check.warn(importable)
2023-09-25T20:57:00,912   /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.tmalign.include' is absent from the `packages` configuration.
2023-09-25T20:57:00,912   !!

2023-09-25T20:57:00,913           ********************************************************************************
2023-09-25T20:57:00,914           ############################
2023-09-25T20:57:00,915           # Package would be ignored #
2023-09-25T20:57:00,916           ############################
2023-09-25T20:57:00,916           Python recognizes 'moleculekit.tmalign.include' as an importable package[^1],
2023-09-25T20:57:00,917           but it is absent from setuptools' `packages` configuration.

2023-09-25T20:57:00,918           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-25T20:57:00,919           package, please make sure that 'moleculekit.tmalign.include' is explicitly added
2023-09-25T20:57:00,919           to the `packages` configuration field.

2023-09-25T20:57:00,921           Alternatively, you can also rely on setuptools' discovery methods
2023-09-25T20:57:00,922           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-25T20:57:00,922           instead of `find_packages(...)`/`find:`).

2023-09-25T20:57:00,924           You can read more about "package discovery" on setuptools documentation page:

2023-09-25T20:57:00,925           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-25T20:57:00,926           If you don't want 'moleculekit.tmalign.include' to be distributed and are
2023-09-25T20:57:00,927           already explicitly excluding 'moleculekit.tmalign.include' via
2023-09-25T20:57:00,928           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-25T20:57:00,928           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-25T20:57:00,929           combination with a more fine grained `package-data` configuration.

2023-09-25T20:57:00,930           You can read more about "package data files" on setuptools documentation page:

2023-09-25T20:57:00,932           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-25T20:57:00,935           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-25T20:57:00,935                 even if it does not contain any `.py` files.
2023-09-25T20:57:00,936                 On the other hand, currently there is no concept of package data
2023-09-25T20:57:00,937                 directory, all directories are treated like packages.
2023-09-25T20:57:00,937           ********************************************************************************

2023-09-25T20:57:00,938   !!
2023-09-25T20:57:00,939     check.warn(importable)
2023-09-25T20:57:00,939   /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.tmalign.src' is absent from the `packages` configuration.
2023-09-25T20:57:00,940   !!

2023-09-25T20:57:00,942           ********************************************************************************
2023-09-25T20:57:00,942           ############################
2023-09-25T20:57:00,943           # Package would be ignored #
2023-09-25T20:57:00,943           ############################
2023-09-25T20:57:00,944           Python recognizes 'moleculekit.tmalign.src' as an importable package[^1],
2023-09-25T20:57:00,945           but it is absent from setuptools' `packages` configuration.

2023-09-25T20:57:00,946           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-25T20:57:00,947           package, please make sure that 'moleculekit.tmalign.src' is explicitly added
2023-09-25T20:57:00,948           to the `packages` configuration field.

2023-09-25T20:57:00,950           Alternatively, you can also rely on setuptools' discovery methods
2023-09-25T20:57:00,950           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-25T20:57:00,951           instead of `find_packages(...)`/`find:`).

2023-09-25T20:57:00,952           You can read more about "package discovery" on setuptools documentation page:

2023-09-25T20:57:00,953           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-25T20:57:00,955           If you don't want 'moleculekit.tmalign.src' to be distributed and are
2023-09-25T20:57:00,956           already explicitly excluding 'moleculekit.tmalign.src' via
2023-09-25T20:57:00,956           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-25T20:57:00,957           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-25T20:57:00,957           combination with a more fine grained `package-data` configuration.

2023-09-25T20:57:00,958           You can read more about "package data files" on setuptools documentation page:

2023-09-25T20:57:00,960           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-25T20:57:00,961           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-25T20:57:00,962                 even if it does not contain any `.py` files.
2023-09-25T20:57:00,962                 On the other hand, currently there is no concept of package data
2023-09-25T20:57:00,962                 directory, all directories are treated like packages.
2023-09-25T20:57:00,963           ********************************************************************************

2023-09-25T20:57:00,964   !!
2023-09-25T20:57:00,965     check.warn(importable)
2023-09-25T20:57:00,965   /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.wrapping' is absent from the `packages` configuration.
2023-09-25T20:57:00,966   !!

2023-09-25T20:57:00,967           ********************************************************************************
2023-09-25T20:57:00,967           ############################
2023-09-25T20:57:00,968           # Package would be ignored #
2023-09-25T20:57:00,968           ############################
2023-09-25T20:57:00,969           Python recognizes 'moleculekit.wrapping' as an importable package[^1],
2023-09-25T20:57:00,969           but it is absent from setuptools' `packages` configuration.

2023-09-25T20:57:00,970           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-25T20:57:00,971           package, please make sure that 'moleculekit.wrapping' is explicitly added
2023-09-25T20:57:00,971           to the `packages` configuration field.

2023-09-25T20:57:00,972           Alternatively, you can also rely on setuptools' discovery methods
2023-09-25T20:57:00,973           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-25T20:57:00,973           instead of `find_packages(...)`/`find:`).

2023-09-25T20:57:00,974           You can read more about "package discovery" on setuptools documentation page:

2023-09-25T20:57:00,974           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-25T20:57:00,975           If you don't want 'moleculekit.wrapping' to be distributed and are
2023-09-25T20:57:00,976           already explicitly excluding 'moleculekit.wrapping' via
2023-09-25T20:57:00,976           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-25T20:57:00,977           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-25T20:57:00,977           combination with a more fine grained `package-data` configuration.

2023-09-25T20:57:00,978           You can read more about "package data files" on setuptools documentation page:

2023-09-25T20:57:00,979           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-25T20:57:00,980           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-25T20:57:00,981                 even if it does not contain any `.py` files.
2023-09-25T20:57:00,981                 On the other hand, currently there is no concept of package data
2023-09-25T20:57:00,981                 directory, all directories are treated like packages.
2023-09-25T20:57:00,982           ********************************************************************************

2023-09-25T20:57:00,983   !!
2023-09-25T20:57:00,983     check.warn(importable)
2023-09-25T20:57:00,984   /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.xtc_utils' is absent from the `packages` configuration.
2023-09-25T20:57:00,984   !!

2023-09-25T20:57:00,985           ********************************************************************************
2023-09-25T20:57:00,986           ############################
2023-09-25T20:57:00,987           # Package would be ignored #
2023-09-25T20:57:00,987           ############################
2023-09-25T20:57:00,988           Python recognizes 'moleculekit.xtc_utils' as an importable package[^1],
2023-09-25T20:57:00,988           but it is absent from setuptools' `packages` configuration.

2023-09-25T20:57:00,989           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-25T20:57:00,990           package, please make sure that 'moleculekit.xtc_utils' is explicitly added
2023-09-25T20:57:00,990           to the `packages` configuration field.

2023-09-25T20:57:00,991           Alternatively, you can also rely on setuptools' discovery methods
2023-09-25T20:57:00,992           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-25T20:57:00,992           instead of `find_packages(...)`/`find:`).

2023-09-25T20:57:00,993           You can read more about "package discovery" on setuptools documentation page:

2023-09-25T20:57:00,995           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-25T20:57:00,996           If you don't want 'moleculekit.xtc_utils' to be distributed and are
2023-09-25T20:57:00,996           already explicitly excluding 'moleculekit.xtc_utils' via
2023-09-25T20:57:00,997           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-25T20:57:00,997           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-25T20:57:00,998           combination with a more fine grained `package-data` configuration.

2023-09-25T20:57:00,999           You can read more about "package data files" on setuptools documentation page:

2023-09-25T20:57:01,000           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-25T20:57:01,002           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-25T20:57:01,002                 even if it does not contain any `.py` files.
2023-09-25T20:57:01,002                 On the other hand, currently there is no concept of package data
2023-09-25T20:57:01,003                 directory, all directories are treated like packages.
2023-09-25T20:57:01,003           ********************************************************************************

2023-09-25T20:57:01,004   !!
2023-09-25T20:57:01,005     check.warn(importable)
2023-09-25T20:57:01,005   /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.xtc_utils.include' is absent from the `packages` configuration.
2023-09-25T20:57:01,006   !!

2023-09-25T20:57:01,007           ********************************************************************************
2023-09-25T20:57:01,007           ############################
2023-09-25T20:57:01,008           # Package would be ignored #
2023-09-25T20:57:01,008           ############################
2023-09-25T20:57:01,009           Python recognizes 'moleculekit.xtc_utils.include' as an importable package[^1],
2023-09-25T20:57:01,009           but it is absent from setuptools' `packages` configuration.

2023-09-25T20:57:01,010           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-25T20:57:01,011           package, please make sure that 'moleculekit.xtc_utils.include' is explicitly added
2023-09-25T20:57:01,011           to the `packages` configuration field.

2023-09-25T20:57:01,012           Alternatively, you can also rely on setuptools' discovery methods
2023-09-25T20:57:01,013           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-25T20:57:01,013           instead of `find_packages(...)`/`find:`).

2023-09-25T20:57:01,014           You can read more about "package discovery" on setuptools documentation page:

2023-09-25T20:57:01,015           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-25T20:57:01,016           If you don't want 'moleculekit.xtc_utils.include' to be distributed and are
2023-09-25T20:57:01,017           already explicitly excluding 'moleculekit.xtc_utils.include' via
2023-09-25T20:57:01,017           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-25T20:57:01,018           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-25T20:57:01,018           combination with a more fine grained `package-data` configuration.

2023-09-25T20:57:01,020           You can read more about "package data files" on setuptools documentation page:

2023-09-25T20:57:01,021           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-25T20:57:01,022           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-25T20:57:01,023                 even if it does not contain any `.py` files.
2023-09-25T20:57:01,023                 On the other hand, currently there is no concept of package data
2023-09-25T20:57:01,024                 directory, all directories are treated like packages.
2023-09-25T20:57:01,024           ********************************************************************************

2023-09-25T20:57:01,025   !!
2023-09-25T20:57:01,026     check.warn(importable)
2023-09-25T20:57:01,026   /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.xtc_utils.src' is absent from the `packages` configuration.
2023-09-25T20:57:01,027   !!

2023-09-25T20:57:01,028           ********************************************************************************
2023-09-25T20:57:01,029           ############################
2023-09-25T20:57:01,029           # Package would be ignored #
2023-09-25T20:57:01,030           ############################
2023-09-25T20:57:01,030           Python recognizes 'moleculekit.xtc_utils.src' as an importable package[^1],
2023-09-25T20:57:01,031           but it is absent from setuptools' `packages` configuration.

2023-09-25T20:57:01,032           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-25T20:57:01,032           package, please make sure that 'moleculekit.xtc_utils.src' is explicitly added
2023-09-25T20:57:01,032           to the `packages` configuration field.

2023-09-25T20:57:01,033           Alternatively, you can also rely on setuptools' discovery methods
2023-09-25T20:57:01,034           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-25T20:57:01,034           instead of `find_packages(...)`/`find:`).

2023-09-25T20:57:01,035           You can read more about "package discovery" on setuptools documentation page:

2023-09-25T20:57:01,036           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-25T20:57:01,037           If you don't want 'moleculekit.xtc_utils.src' to be distributed and are
2023-09-25T20:57:01,037           already explicitly excluding 'moleculekit.xtc_utils.src' via
2023-09-25T20:57:01,038           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-25T20:57:01,038           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-25T20:57:01,039           combination with a more fine grained `package-data` configuration.

2023-09-25T20:57:01,040           You can read more about "package data files" on setuptools documentation page:

2023-09-25T20:57:01,041           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-25T20:57:01,043           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-25T20:57:01,043                 even if it does not contain any `.py` files.
2023-09-25T20:57:01,043                 On the other hand, currently there is no concept of package data
2023-09-25T20:57:01,044                 directory, all directories are treated like packages.
2023-09-25T20:57:01,045           ********************************************************************************

2023-09-25T20:57:01,046   !!
2023-09-25T20:57:01,046     check.warn(importable)
2023-09-25T20:57:01,046   copying moleculekit/logging.ini -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-25T20:57:01,047   copying moleculekit/vmd_wrapper -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-25T20:57:01,047   creating build/lib.linux-armv7l-cpython-311/moleculekit/atomselect_utils
2023-09-25T20:57:01,048   copying moleculekit/atomselect_utils/atomselect_utils.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/atomselect_utils
2023-09-25T20:57:01,049   copying moleculekit/atomselect_utils/atomselect_utils.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/atomselect_utils
2023-09-25T20:57:01,049   creating build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser_utils
2023-09-25T20:57:01,050   copying moleculekit/bondguesser_utils/bondguesser_utils.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser_utils
2023-09-25T20:57:01,050   copying moleculekit/bondguesser_utils/bondguesser_utils.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser_utils
2023-09-25T20:57:01,051   creating build/lib.linux-armv7l-cpython-311/moleculekit/distance_utils
2023-09-25T20:57:01,051   copying moleculekit/distance_utils/distance_utils.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/distance_utils
2023-09-25T20:57:01,052   copying moleculekit/distance_utils/distance_utils.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/distance_utils
2023-09-25T20:57:01,053   creating build/lib.linux-armv7l-cpython-311/moleculekit/occupancy_utils
2023-09-25T20:57:01,053   copying moleculekit/occupancy_utils/occupancy_utils.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/occupancy_utils
2023-09-25T20:57:01,054   copying moleculekit/occupancy_utils/occupancy_utils.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/occupancy_utils
2023-09-25T20:57:01,054   creating build/lib.linux-armv7l-cpython-311/moleculekit/share
2023-09-25T20:57:01,055   copying moleculekit/share/ALA.cif -> build/lib.linux-armv7l-cpython-311/moleculekit/share
2023-09-25T20:57:01,055   copying moleculekit/share/backbone.cif -> build/lib.linux-armv7l-cpython-311/moleculekit/share
2023-09-25T20:57:01,056   copying moleculekit/share/opm_sequences.json -> build/lib.linux-armv7l-cpython-311/moleculekit/share
2023-09-25T20:57:01,056   creating build/lib.linux-armv7l-cpython-311/moleculekit/share/atomselect
2023-09-25T20:57:01,057   copying moleculekit/share/atomselect/atomselect.json -> build/lib.linux-armv7l-cpython-311/moleculekit/share/atomselect
2023-09-25T20:57:01,057   creating build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr
2023-09-25T20:57:01,058   creating build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,058   copying moleculekit/share/pdb2pqr/residues/.gitkeep -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,059   copying moleculekit/share/pdb2pqr/residues/004.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,059   copying moleculekit/share/pdb2pqr/residues/004.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,060   copying moleculekit/share/pdb2pqr/residues/03Y.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,060   copying moleculekit/share/pdb2pqr/residues/03Y.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,061   copying moleculekit/share/pdb2pqr/residues/0A1.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,061   copying moleculekit/share/pdb2pqr/residues/0A1.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,062   copying moleculekit/share/pdb2pqr/residues/0AF.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,062   copying moleculekit/share/pdb2pqr/residues/0AF.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,063   copying moleculekit/share/pdb2pqr/residues/0BN.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,063   copying moleculekit/share/pdb2pqr/residues/0BN.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,064   copying moleculekit/share/pdb2pqr/residues/1MH.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,064   copying moleculekit/share/pdb2pqr/residues/1MH.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,065   copying moleculekit/share/pdb2pqr/residues/2AS.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,065   copying moleculekit/share/pdb2pqr/residues/2AS.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,066   copying moleculekit/share/pdb2pqr/residues/2GX.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,067   copying moleculekit/share/pdb2pqr/residues/2GX.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,067   copying moleculekit/share/pdb2pqr/residues/2ML.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,068   copying moleculekit/share/pdb2pqr/residues/2ML.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,068   copying moleculekit/share/pdb2pqr/residues/2MR.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,069   copying moleculekit/share/pdb2pqr/residues/2MR.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,070   copying moleculekit/share/pdb2pqr/residues/4IN.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,070   copying moleculekit/share/pdb2pqr/residues/4IN.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,071   copying moleculekit/share/pdb2pqr/residues/4PH.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,071   copying moleculekit/share/pdb2pqr/residues/4PH.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,072   copying moleculekit/share/pdb2pqr/residues/4PQ.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,072   copying moleculekit/share/pdb2pqr/residues/4PQ.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,073   copying moleculekit/share/pdb2pqr/residues/5JP.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,073   copying moleculekit/share/pdb2pqr/residues/5JP.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,074   copying moleculekit/share/pdb2pqr/residues/AA4.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,074   copying moleculekit/share/pdb2pqr/residues/AA4.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,075   copying moleculekit/share/pdb2pqr/residues/ABA.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,075   copying moleculekit/share/pdb2pqr/residues/ABA.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,076   copying moleculekit/share/pdb2pqr/residues/AHP.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,076   copying moleculekit/share/pdb2pqr/residues/AHP.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,077   copying moleculekit/share/pdb2pqr/residues/ALC.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,077   copying moleculekit/share/pdb2pqr/residues/ALC.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,078   copying moleculekit/share/pdb2pqr/residues/ALN.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,078   copying moleculekit/share/pdb2pqr/residues/ALN.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,079   copying moleculekit/share/pdb2pqr/residues/ALY.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,079   copying moleculekit/share/pdb2pqr/residues/ALY.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,080   copying moleculekit/share/pdb2pqr/residues/APD.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,080   copying moleculekit/share/pdb2pqr/residues/APD.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,081   copying moleculekit/share/pdb2pqr/residues/BB8.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,082   copying moleculekit/share/pdb2pqr/residues/BB8.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,082   copying moleculekit/share/pdb2pqr/residues/BCS.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,083   copying moleculekit/share/pdb2pqr/residues/BCS.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,083   copying moleculekit/share/pdb2pqr/residues/BTK.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,084   copying moleculekit/share/pdb2pqr/residues/BTK.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,084   copying moleculekit/share/pdb2pqr/residues/CCS.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,085   copying moleculekit/share/pdb2pqr/residues/CCS.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,085   copying moleculekit/share/pdb2pqr/residues/CGU.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,086   copying moleculekit/share/pdb2pqr/residues/CGU.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,086   copying moleculekit/share/pdb2pqr/residues/CSA.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,087   copying moleculekit/share/pdb2pqr/residues/CSA.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,087   copying moleculekit/share/pdb2pqr/residues/CSO.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,088   copying moleculekit/share/pdb2pqr/residues/CSO.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,088   copying moleculekit/share/pdb2pqr/residues/CSP.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,089   copying moleculekit/share/pdb2pqr/residues/CSP.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,089   copying moleculekit/share/pdb2pqr/residues/CSS.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,090   copying moleculekit/share/pdb2pqr/residues/CSS.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,090   copying moleculekit/share/pdb2pqr/residues/D4P.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,091   copying moleculekit/share/pdb2pqr/residues/D4P.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,091   copying moleculekit/share/pdb2pqr/residues/DA2.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,092   copying moleculekit/share/pdb2pqr/residues/DA2.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,092   copying moleculekit/share/pdb2pqr/residues/DAB.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,093   copying moleculekit/share/pdb2pqr/residues/DAB.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,093   copying moleculekit/share/pdb2pqr/residues/DAH.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,094   copying moleculekit/share/pdb2pqr/residues/DAH.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,094   copying moleculekit/share/pdb2pqr/residues/DPP.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,095   copying moleculekit/share/pdb2pqr/residues/DPP.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,095   copying moleculekit/share/pdb2pqr/residues/ESC.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,096   copying moleculekit/share/pdb2pqr/residues/ESC.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,096   copying moleculekit/share/pdb2pqr/residues/FGL.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,097   copying moleculekit/share/pdb2pqr/residues/FGL.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,097   copying moleculekit/share/pdb2pqr/residues/GHG.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,098   copying moleculekit/share/pdb2pqr/residues/GHG.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,098   copying moleculekit/share/pdb2pqr/residues/GME.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,099   copying moleculekit/share/pdb2pqr/residues/GME.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,099   copying moleculekit/share/pdb2pqr/residues/GNC.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,099   copying moleculekit/share/pdb2pqr/residues/GNC.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,100   copying moleculekit/share/pdb2pqr/residues/HHK.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,100   copying moleculekit/share/pdb2pqr/residues/HHK.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,101   copying moleculekit/share/pdb2pqr/residues/HLU.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,101   copying moleculekit/share/pdb2pqr/residues/HLU.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,102   copying moleculekit/share/pdb2pqr/residues/HLX.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,102   copying moleculekit/share/pdb2pqr/residues/HLX.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,103   copying moleculekit/share/pdb2pqr/residues/HOX.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,105   copying moleculekit/share/pdb2pqr/residues/HOX.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,107   copying moleculekit/share/pdb2pqr/residues/HPE.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,109   copying moleculekit/share/pdb2pqr/residues/HPE.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,111   copying moleculekit/share/pdb2pqr/residues/HQA.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,113   copying moleculekit/share/pdb2pqr/residues/HQA.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,115   copying moleculekit/share/pdb2pqr/residues/HTR.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,117   copying moleculekit/share/pdb2pqr/residues/HTR.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,119   copying moleculekit/share/pdb2pqr/residues/HYP.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,121   copying moleculekit/share/pdb2pqr/residues/HYP.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,123   copying moleculekit/share/pdb2pqr/residues/I2M.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,125   copying moleculekit/share/pdb2pqr/residues/I2M.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,127   copying moleculekit/share/pdb2pqr/residues/IGL.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,129   copying moleculekit/share/pdb2pqr/residues/IGL.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,131   copying moleculekit/share/pdb2pqr/residues/IIL.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,133   copying moleculekit/share/pdb2pqr/residues/IIL.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,135   copying moleculekit/share/pdb2pqr/residues/IML.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,136   copying moleculekit/share/pdb2pqr/residues/IML.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,138   copying moleculekit/share/pdb2pqr/residues/KYN.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,140   copying moleculekit/share/pdb2pqr/residues/KYN.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,142   copying moleculekit/share/pdb2pqr/residues/LME.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,144   copying moleculekit/share/pdb2pqr/residues/LME.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,146   copying moleculekit/share/pdb2pqr/residues/LMQ.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,148   copying moleculekit/share/pdb2pqr/residues/LMQ.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,149   copying moleculekit/share/pdb2pqr/residues/LYZ.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,151   copying moleculekit/share/pdb2pqr/residues/LYZ.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,153   copying moleculekit/share/pdb2pqr/residues/M3L.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,155   copying moleculekit/share/pdb2pqr/residues/M3L.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,158   copying moleculekit/share/pdb2pqr/residues/ME0.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,160   copying moleculekit/share/pdb2pqr/residues/ME0.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,162   copying moleculekit/share/pdb2pqr/residues/MEA.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,164   copying moleculekit/share/pdb2pqr/residues/MEA.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,166   copying moleculekit/share/pdb2pqr/residues/MEN.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,168   copying moleculekit/share/pdb2pqr/residues/MEN.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,170   copying moleculekit/share/pdb2pqr/residues/MEQ.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,172   copying moleculekit/share/pdb2pqr/residues/MEQ.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,174   copying moleculekit/share/pdb2pqr/residues/MLE.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,176   copying moleculekit/share/pdb2pqr/residues/MLE.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,178   copying moleculekit/share/pdb2pqr/residues/MLY.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,180   copying moleculekit/share/pdb2pqr/residues/MLY.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,182   copying moleculekit/share/pdb2pqr/residues/MLZ.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,184   copying moleculekit/share/pdb2pqr/residues/MLZ.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,186   copying moleculekit/share/pdb2pqr/residues/MME.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,188   copying moleculekit/share/pdb2pqr/residues/MME.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,190   copying moleculekit/share/pdb2pqr/residues/MMO.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,192   copying moleculekit/share/pdb2pqr/residues/MMO.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,193   copying moleculekit/share/pdb2pqr/residues/MVA.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,195   copying moleculekit/share/pdb2pqr/residues/MVA.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,197   copying moleculekit/share/pdb2pqr/residues/NAL.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,199   copying moleculekit/share/pdb2pqr/residues/NAL.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,201   copying moleculekit/share/pdb2pqr/residues/NCY.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,203   copying moleculekit/share/pdb2pqr/residues/NCY.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,205   copying moleculekit/share/pdb2pqr/residues/NLE.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,207   copying moleculekit/share/pdb2pqr/residues/NLE.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,209   copying moleculekit/share/pdb2pqr/residues/NVA.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,211   copying moleculekit/share/pdb2pqr/residues/NVA.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,213   copying moleculekit/share/pdb2pqr/residues/NZC.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,215   copying moleculekit/share/pdb2pqr/residues/NZC.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,218   copying moleculekit/share/pdb2pqr/residues/OCY.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,220   copying moleculekit/share/pdb2pqr/residues/OCY.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,222   copying moleculekit/share/pdb2pqr/residues/OMX.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,224   copying moleculekit/share/pdb2pqr/residues/OMX.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,226   copying moleculekit/share/pdb2pqr/residues/ONL.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,228   copying moleculekit/share/pdb2pqr/residues/ONL.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,230   copying moleculekit/share/pdb2pqr/residues/ORM.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,232   copying moleculekit/share/pdb2pqr/residues/ORM.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,234   copying moleculekit/share/pdb2pqr/residues/P1L.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,236   copying moleculekit/share/pdb2pqr/residues/P1L.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,238   copying moleculekit/share/pdb2pqr/residues/PCA.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,240   copying moleculekit/share/pdb2pqr/residues/PCA.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,242   copying moleculekit/share/pdb2pqr/residues/PRK.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,244   copying moleculekit/share/pdb2pqr/residues/PRK.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,246   copying moleculekit/share/pdb2pqr/residues/PTR.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,248   copying moleculekit/share/pdb2pqr/residues/PTR.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,249   copying moleculekit/share/pdb2pqr/residues/SEP.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,251   copying moleculekit/share/pdb2pqr/residues/SEP.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,253   copying moleculekit/share/pdb2pqr/residues/TPO.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,255   copying moleculekit/share/pdb2pqr/residues/TPO.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,257   copying moleculekit/share/pdb2pqr/residues/TRO.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,259   copying moleculekit/share/pdb2pqr/residues/TRO.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,261   copying moleculekit/share/pdb2pqr/residues/TY2.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,263   copying moleculekit/share/pdb2pqr/residues/TY2.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,265   copying moleculekit/share/pdb2pqr/residues/TYQ.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,266   copying moleculekit/share/pdb2pqr/residues/TYQ.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,269   copying moleculekit/share/pdb2pqr/residues/YCM.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,270   copying moleculekit/share/pdb2pqr/residues/YCM.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,272   copying moleculekit/share/pdb2pqr/residues/YNM.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,274   copying moleculekit/share/pdb2pqr/residues/YNM.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-25T20:57:01,276   creating build/lib.linux-armv7l-cpython-311/moleculekit/tmalign
2023-09-25T20:57:01,277   copying moleculekit/tmalign/tmalign_util.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/tmalign
2023-09-25T20:57:01,297   copying moleculekit/tmalign/tmalign_util.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/tmalign
2023-09-25T20:57:01,299   copying moleculekit/tmalign/tmalignlib.pxd -> build/lib.linux-armv7l-cpython-311/moleculekit/tmalign
2023-09-25T20:57:01,301   creating build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/include
2023-09-25T20:57:01,302   copying moleculekit/tmalign/include/TMAlign.h -> build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/include
2023-09-25T20:57:01,304   creating build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/src
2023-09-25T20:57:01,305   copying moleculekit/tmalign/src/TMAlign.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/src
2023-09-25T20:57:01,310   creating build/lib.linux-armv7l-cpython-311/moleculekit/wrapping
2023-09-25T20:57:01,311   copying moleculekit/wrapping/wrapping.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/wrapping
2023-09-25T20:57:01,338   copying moleculekit/wrapping/wrapping.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/wrapping
2023-09-25T20:57:01,340   creating build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils
2023-09-25T20:57:01,341   copying moleculekit/xtc_utils/xtc.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils
2023-09-25T20:57:01,368   copying moleculekit/xtc_utils/xtc.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils
2023-09-25T20:57:01,369   copying moleculekit/xtc_utils/xtclib.pxd -> build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils
2023-09-25T20:57:01,371   creating build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/include
2023-09-25T20:57:01,372   copying moleculekit/xtc_utils/include/xdrfile.h -> build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/include
2023-09-25T20:57:01,375   copying moleculekit/xtc_utils/include/xdrfile_xtc.h -> build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/include
2023-09-25T20:57:01,376   copying moleculekit/xtc_utils/include/xtc.h -> build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/include
2023-09-25T20:57:01,378   creating build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/src
2023-09-25T20:57:01,379   copying moleculekit/xtc_utils/src/xdrfile.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/src
2023-09-25T20:57:01,382   copying moleculekit/xtc_utils/src/xdrfile_xtc.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/src
2023-09-25T20:57:01,384   copying moleculekit/xtc_utils/src/xtc.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/src
2023-09-25T20:57:01,387   creating build/lib.linux-armv7l-cpython-311/moleculekit/interactions/cationpi
2023-09-25T20:57:01,388   copying moleculekit/interactions/cationpi/cationpi.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/cationpi
2023-09-25T20:57:01,408   copying moleculekit/interactions/cationpi/cationpi.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/cationpi
2023-09-25T20:57:01,411   creating build/lib.linux-armv7l-cpython-311/moleculekit/interactions/hbonds
2023-09-25T20:57:01,412   copying moleculekit/interactions/hbonds/hbonds.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/hbonds
2023-09-25T20:57:01,445   copying moleculekit/interactions/hbonds/hbonds.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/hbonds
2023-09-25T20:57:01,448   creating build/lib.linux-armv7l-cpython-311/moleculekit/interactions/pipi
2023-09-25T20:57:01,450   copying moleculekit/interactions/pipi/pipi.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/pipi
2023-09-25T20:57:01,479   copying moleculekit/interactions/pipi/pipi.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/pipi
2023-09-25T20:57:01,481   creating build/lib.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole
2023-09-25T20:57:01,482   copying moleculekit/interactions/sigmahole/sigmahole.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole
2023-09-25T20:57:01,511   copying moleculekit/interactions/sigmahole/sigmahole.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole
2023-09-25T20:57:01,525   UPDATING build/lib.linux-armv7l-cpython-311/moleculekit/_version.py
2023-09-25T20:57:01,525   set build/lib.linux-armv7l-cpython-311/moleculekit/_version.py to '1.7.4'
2023-09-25T20:57:01,526   running build_ext
2023-09-25T20:57:01,538   building 'moleculekit.interactions.hbonds' extension
2023-09-25T20:57:01,539   creating build/temp.linux-armv7l-cpython-311
2023-09-25T20:57:01,540   creating build/temp.linux-armv7l-cpython-311/moleculekit
2023-09-25T20:57:01,541   creating build/temp.linux-armv7l-cpython-311/moleculekit/interactions
2023-09-25T20:57:01,542   creating build/temp.linux-armv7l-cpython-311/moleculekit/interactions/hbonds
2023-09-25T20:57:01,544   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/interactions/hbonds/hbonds.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/interactions/hbonds/hbonds.o -O3
2023-09-25T20:57:01,904   In file included from /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-09-25T20:57:01,905                    from /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-09-25T20:57:01,906                    from /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-09-25T20:57:01,906                    from moleculekit/interactions/hbonds/hbonds.cpp:1192:
2023-09-25T20:57:01,906   /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-09-25T20:57:01,907      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-09-25T20:57:01,907         |  ^~~~~~~
2023-09-25T20:57:32,162   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/interactions/hbonds/hbonds.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/interactions/hbonds.cpython-311-arm-linux-gnueabihf.so
2023-09-25T20:57:32,444   building 'moleculekit.interactions.pipi' extension
2023-09-25T20:57:32,445   creating build/temp.linux-armv7l-cpython-311/moleculekit/interactions/pipi
2023-09-25T20:57:32,445   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/interactions/pipi/pipi.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/interactions/pipi/pipi.o -O3
2023-09-25T20:57:32,753   In file included from /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-09-25T20:57:32,753                    from /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-09-25T20:57:32,754                    from /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-09-25T20:57:32,755                    from moleculekit/interactions/pipi/pipi.cpp:1192:
2023-09-25T20:57:32,755   /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-09-25T20:57:32,756      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-09-25T20:57:32,756         |  ^~~~~~~
2023-09-25T20:58:05,274   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/interactions/pipi/pipi.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/interactions/pipi.cpython-311-arm-linux-gnueabihf.so
2023-09-25T20:58:05,554   building 'moleculekit.interactions.cationpi' extension
2023-09-25T20:58:05,555   creating build/temp.linux-armv7l-cpython-311/moleculekit/interactions/cationpi
2023-09-25T20:58:05,555   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/interactions/cationpi/cationpi.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/interactions/cationpi/cationpi.o -O3
2023-09-25T20:58:05,860   In file included from /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-09-25T20:58:05,861                    from /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-09-25T20:58:05,862                    from /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-09-25T20:58:05,862                    from moleculekit/interactions/cationpi/cationpi.cpp:1192:
2023-09-25T20:58:05,862   /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-09-25T20:58:05,863      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-09-25T20:58:05,863         |  ^~~~~~~
2023-09-25T20:58:38,341   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/interactions/cationpi/cationpi.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/interactions/cationpi.cpython-311-arm-linux-gnueabihf.so
2023-09-25T20:58:38,631   building 'moleculekit.interactions.sigmahole' extension
2023-09-25T20:58:38,632   creating build/temp.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole
2023-09-25T20:58:38,632   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/interactions/sigmahole/sigmahole.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole/sigmahole.o -O3
2023-09-25T20:58:38,930   In file included from /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-09-25T20:58:38,930                    from /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-09-25T20:58:38,931                    from /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-09-25T20:58:38,932                    from moleculekit/interactions/sigmahole/sigmahole.cpp:1192:
2023-09-25T20:58:38,932   /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-09-25T20:58:38,933      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-09-25T20:58:38,934         |  ^~~~~~~
2023-09-25T20:59:10,822   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole/sigmahole.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole.cpython-311-arm-linux-gnueabihf.so
2023-09-25T20:59:11,125   building 'moleculekit.wrapping' extension
2023-09-25T20:59:11,126   creating build/temp.linux-armv7l-cpython-311/moleculekit/wrapping
2023-09-25T20:59:11,127   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/wrapping/wrapping.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/wrapping/wrapping.o -O3
2023-09-25T20:59:11,493   In file included from /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-09-25T20:59:11,494                    from /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-09-25T20:59:11,495                    from /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-09-25T20:59:11,497                    from moleculekit/wrapping/wrapping.cpp:1192:
2023-09-25T20:59:11,498   /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-09-25T20:59:11,499      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-09-25T20:59:11,500         |  ^~~~~~~
2023-09-25T20:59:39,624   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/wrapping/wrapping.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/wrapping.cpython-311-arm-linux-gnueabihf.so
2023-09-25T20:59:39,809   building 'moleculekit.bondguesser_utils' extension
2023-09-25T20:59:39,810   creating build/temp.linux-armv7l-cpython-311/moleculekit/bondguesser_utils
2023-09-25T20:59:39,811   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/bondguesser_utils/bondguesser_utils.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/bondguesser_utils/bondguesser_utils.o -O3
2023-09-25T20:59:40,112   In file included from /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-09-25T20:59:40,113                    from /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-09-25T20:59:40,113                    from /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-09-25T20:59:40,114                    from moleculekit/bondguesser_utils/bondguesser_utils.cpp:1192:
2023-09-25T20:59:40,114   /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-09-25T20:59:40,115      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-09-25T20:59:40,116         |  ^~~~~~~
2023-09-25T20:59:42,413   moleculekit/bondguesser_utils/bondguesser_utils.cpp: In function ‘PyObject* __pyx_pf_11moleculekit_17bondguesser_utils_make_grid_neighborlist_nonperiodic(PyObject*, __Pyx_memviewslice, __pyx_t_11moleculekit_17bondguesser_utils_UINT32_t, __pyx_t_11moleculekit_17bondguesser_utils_UINT32_t, __pyx_t_11moleculekit_17bondguesser_utils_UINT32_t)’:
2023-09-25T20:59:42,413   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19831:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} [-Wsign-compare]
2023-09-25T20:59:42,414   19831 |   for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) {
2023-09-25T20:59:42,415         |                       ~~~~~~~~~~^~~~~~~~~~~
2023-09-25T20:59:42,415   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19843:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} [-Wsign-compare]
2023-09-25T20:59:42,416   19843 |     for (__pyx_t_6 = 0; __pyx_t_6 < __pyx_t_5; __pyx_t_6+=1) {
2023-09-25T20:59:42,416         |                         ~~~~~~~~~~^~~~~~~~~~~
2023-09-25T20:59:42,417   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19855:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} [-Wsign-compare]
2023-09-25T20:59:42,418   19855 |       for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_8; __pyx_t_9+=1) {
2023-09-25T20:59:42,419         |                           ~~~~~~~~~~^~~~~~~~~~~
2023-09-25T20:59:42,419   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19894:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-25T20:59:42,420   19894 |         __pyx_t_12 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-09-25T20:59:42,420         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-25T20:59:42,421   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19933:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-25T20:59:42,421   19933 |         __pyx_t_12 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2023-09-25T20:59:42,422         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-25T20:59:42,422   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19972:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-25T20:59:42,423   19972 |         __pyx_t_12 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-09-25T20:59:42,423         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-25T20:59:42,424   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20011:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-25T20:59:42,424   20011 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-09-25T20:59:42,425         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-25T20:59:42,425   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20017:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-25T20:59:42,426   20017 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2023-09-25T20:59:42,427         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-25T20:59:42,427   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20058:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-25T20:59:42,428   20058 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-09-25T20:59:42,429         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-25T20:59:42,429   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20064:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-25T20:59:42,430   20064 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-09-25T20:59:42,431         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-25T20:59:42,431   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20105:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-25T20:59:42,432   20105 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2023-09-25T20:59:42,433         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-25T20:59:42,433   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20111:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-25T20:59:42,434   20111 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-09-25T20:59:42,434         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-25T20:59:42,435   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20152:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-25T20:59:42,436   20152 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-09-25T20:59:42,437         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-25T20:59:42,437   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20205:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-25T20:59:42,438   20205 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-09-25T20:59:42,439         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-25T20:59:42,439   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20252:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-25T20:59:42,440   20252 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-09-25T20:59:42,440         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-25T20:59:42,441   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20293:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-25T20:59:42,441   20293 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-09-25T20:59:42,442         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-25T20:59:42,442   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20299:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-25T20:59:42,443   20299 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2023-09-25T20:59:42,444         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-25T20:59:42,444   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20305:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-25T20:59:42,445   20305 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-09-25T20:59:42,445         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-25T20:59:42,446   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20352:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-25T20:59:42,447   20352 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2023-09-25T20:59:42,448         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-25T20:59:42,448   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20358:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-25T20:59:42,449   20358 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-09-25T20:59:42,450         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-25T20:59:42,451   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20399:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-25T20:59:42,451   20399 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-09-25T20:59:42,452         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-25T20:59:42,453   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20411:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-25T20:59:42,453   20411 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-09-25T20:59:42,454         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-25T20:59:42,455   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20464:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-25T20:59:42,455   20464 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-09-25T20:59:42,456         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-25T20:59:42,464   moleculekit/bondguesser_utils/bondguesser_utils.cpp: In function ‘PyObject* __pyx_pf_11moleculekit_17bondguesser_utils_2grid_bonds(PyObject*, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, float, int, __Pyx_memviewslice, __Pyx_memviewslice)’:
2023-09-25T20:59:42,464   moleculekit/bondguesser_utils/bondguesser_utils.cpp:21089:37: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-09-25T20:59:42,465   21089 |       __pyx_t_6 = (__pyx_v_boxneigh == __pyx_v_n_boxes);
2023-09-25T20:59:42,466         |                    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
2023-09-25T20:59:42,466   moleculekit/bondguesser_utils/bondguesser_utils.cpp:21126:37: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-09-25T20:59:42,467   21126 |       __pyx_t_6 = (__pyx_v_boxneigh == __pyx_v_boxidx);
2023-09-25T20:59:42,467         |                    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2023-09-25T21:00:08,821   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/bondguesser_utils/bondguesser_utils.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser_utils.cpython-311-arm-linux-gnueabihf.so
2023-09-25T21:00:09,093   building 'moleculekit.atomselect_utils' extension
2023-09-25T21:00:09,094   creating build/temp.linux-armv7l-cpython-311/moleculekit/atomselect_utils
2023-09-25T21:00:09,094   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/atomselect_utils/atomselect_utils.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/atomselect_utils/atomselect_utils.o -O3
2023-09-25T21:00:09,394   In file included from /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-09-25T21:00:09,394                    from /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-09-25T21:00:09,395                    from /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-09-25T21:00:09,396                    from moleculekit/atomselect_utils/atomselect_utils.cpp:1209:
2023-09-25T21:00:09,396   /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-09-25T21:00:09,397      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-09-25T21:00:09,398         |  ^~~~~~~
2023-09-25T21:00:11,908   moleculekit/atomselect_utils/atomselect_utils.cpp: In function ‘bool __pyx_f_11moleculekit_16atomselect_utils__find_connected_subfragment(int, int, const char*, const char*, const char*, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, std::vector<std::__cxx11::basic_string<char> >&, __Pyx_memviewslice, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&)’:
2023-09-25T21:00:11,909   moleculekit/atomselect_utils/atomselect_utils.cpp:23820:161: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_16atomselect_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-09-25T21:00:11,910   23820 |       __pyx_t_3 = ((*((__pyx_t_11moleculekit_16atomselect_utils_UINT32_t *) ( /* dim=0 */ (__pyx_v_uq_resid.data + __pyx_t_2 * __pyx_v_uq_resid.strides[0]) ))) != __pyx_v_resnum);
2023-09-25T21:00:11,911         |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2023-09-25T21:00:11,916   moleculekit/atomselect_utils/atomselect_utils.cpp: In function ‘bool __pyx_f_11moleculekit_16atomselect_utils__find_subfragments(int, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, std::vector<std::__cxx11::basic_string<char> >&, __Pyx_memviewslice, std::vector<std::vector<int> >&)’:
2023-09-25T21:00:11,917   moleculekit/atomselect_utils/atomselect_utils.cpp:24075:163: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_16atomselect_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-09-25T21:00:11,917   24075 |         __pyx_t_6 = ((*((__pyx_t_11moleculekit_16atomselect_utils_UINT32_t *) ( /* dim=0 */ (__pyx_v_uq_resid.data + __pyx_t_5 * __pyx_v_uq_resid.strides[0]) ))) != __pyx_v_i);
2023-09-25T21:00:11,918         |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-09-25T21:00:11,923   moleculekit/atomselect_utils/atomselect_utils.cpp: In function ‘bool __pyx_f_11moleculekit_16atomselect_utils__find_subfragments_topologically(int, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, std::vector<std::__cxx11::basic_string<char> >&, __Pyx_memviewslice, std::vector<std::vector<int> >&)’:
2023-09-25T21:00:11,924   moleculekit/atomselect_utils/atomselect_utils.cpp:24345:163: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_16atomselect_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-09-25T21:00:11,925   24345 |         __pyx_t_6 = ((*((__pyx_t_11moleculekit_16atomselect_utils_UINT32_t *) ( /* dim=0 */ (__pyx_v_uq_resid.data + __pyx_t_5 * __pyx_v_uq_resid.strides[0]) ))) != __pyx_v_i);
2023-09-25T21:00:11,925         |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-09-25T21:00:46,404   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/atomselect_utils/atomselect_utils.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/atomselect_utils.cpython-311-arm-linux-gnueabihf.so
2023-09-25T21:00:46,693   building 'moleculekit.distance_utils' extension
2023-09-25T21:00:46,693   creating build/temp.linux-armv7l-cpython-311/moleculekit/distance_utils
2023-09-25T21:00:46,694   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/distance_utils/distance_utils.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/distance_utils/distance_utils.o -O3
2023-09-25T21:00:47,010   In file included from /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-09-25T21:00:47,011                    from /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-09-25T21:00:47,012                    from /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-09-25T21:00:47,012                    from moleculekit/distance_utils/distance_utils.cpp:1192:
2023-09-25T21:00:47,013   /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-09-25T21:00:47,013      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-09-25T21:00:47,014         |  ^~~~~~~
2023-09-25T21:01:23,907   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/distance_utils/distance_utils.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/distance_utils.cpython-311-arm-linux-gnueabihf.so
2023-09-25T21:01:24,197   building 'moleculekit.occupancy_utils' extension
2023-09-25T21:01:24,198   creating build/temp.linux-armv7l-cpython-311/moleculekit/occupancy_utils
2023-09-25T21:01:24,198   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/occupancy_utils/occupancy_utils.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/occupancy_utils/occupancy_utils.o -O3
2023-09-25T21:01:24,502   In file included from /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-09-25T21:01:24,503                    from /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-09-25T21:01:24,503                    from /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-09-25T21:01:24,504                    from moleculekit/occupancy_utils/occupancy_utils.cpp:1192:
2023-09-25T21:01:24,504   /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-09-25T21:01:24,505      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-09-25T21:01:24,505         |  ^~~~~~~
2023-09-25T21:01:51,597   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/occupancy_utils/occupancy_utils.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/occupancy_utils.cpython-311-arm-linux-gnueabihf.so
2023-09-25T21:01:51,791   building 'moleculekit.xtc' extension
2023-09-25T21:01:51,791   creating build/temp.linux-armv7l-cpython-311/moleculekit/xtc_utils
2023-09-25T21:01:51,792   creating build/temp.linux-armv7l-cpython-311/moleculekit/xtc_utils/src
2023-09-25T21:01:51,793   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/xtc_utils/src/xdrfile.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/xtc_utils/src/xdrfile.o
2023-09-25T21:01:52,430   moleculekit/xtc_utils/src/xdrfile.cpp:66:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-09-25T21:01:52,431      66 |         "OK",
2023-09-25T21:01:52,432         |         ^~~~
2023-09-25T21:01:52,432   moleculekit/xtc_utils/src/xdrfile.cpp:67:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-09-25T21:01:52,433      67 |         "Header",
2023-09-25T21:01:52,434         |         ^~~~~~~~
2023-09-25T21:01:52,434   moleculekit/xtc_utils/src/xdrfile.cpp:68:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-09-25T21:01:52,435      68 |         "String",
2023-09-25T21:01:52,436         |         ^~~~~~~~
2023-09-25T21:01:52,436   moleculekit/xtc_utils/src/xdrfile.cpp:69:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-09-25T21:01:52,437      69 |         "Double",
2023-09-25T21:01:52,438         |         ^~~~~~~~
2023-09-25T21:01:52,438   moleculekit/xtc_utils/src/xdrfile.cpp:70:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-09-25T21:01:52,439      70 |         "Integer",
2023-09-25T21:01:52,440         |         ^~~~~~~~~
2023-09-25T21:01:52,440   moleculekit/xtc_utils/src/xdrfile.cpp:71:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-09-25T21:01:52,441      71 |         "Float",
2023-09-25T21:01:52,441         |         ^~~~~~~
2023-09-25T21:01:52,442   moleculekit/xtc_utils/src/xdrfile.cpp:72:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-09-25T21:01:52,442      72 |         "Unsigned integer",
2023-09-25T21:01:52,443         |         ^~~~~~~~~~~~~~~~~~
2023-09-25T21:01:52,443   moleculekit/xtc_utils/src/xdrfile.cpp:73:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-09-25T21:01:52,443      73 |         "Compressed 3D coordinate",
2023-09-25T21:01:52,444         |         ^~~~~~~~~~~~~~~~~~~~~~~~~~
2023-09-25T21:01:52,444   moleculekit/xtc_utils/src/xdrfile.cpp:74:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-09-25T21:01:52,445      74 |         "Closing file",
2023-09-25T21:01:52,446         |         ^~~~~~~~~~~~~~
2023-09-25T21:01:52,446   moleculekit/xtc_utils/src/xdrfile.cpp:75:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-09-25T21:01:52,447      75 |         "Magic number",
2023-09-25T21:01:52,447         |         ^~~~~~~~~~~~~~
2023-09-25T21:01:52,448   moleculekit/xtc_utils/src/xdrfile.cpp:76:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-09-25T21:01:52,449      76 |         "Not enough memory",
2023-09-25T21:01:52,449         |         ^~~~~~~~~~~~~~~~~~~
2023-09-25T21:01:52,450   moleculekit/xtc_utils/src/xdrfile.cpp:77:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-09-25T21:01:52,451      77 |         "End of file",
2023-09-25T21:01:52,451         |         ^~~~~~~~~~~~~
2023-09-25T21:01:52,452   moleculekit/xtc_utils/src/xdrfile.cpp:78:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-09-25T21:01:52,453      78 |         "File not found"
2023-09-25T21:01:52,453         |         ^~~~~~~~~~~~~~~~
2023-09-25T21:01:52,459   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int sizeofint(int)’:
2023-09-25T21:01:52,460   moleculekit/xtc_utils/src/xdrfile.cpp:459:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-25T21:01:52,461     459 |     while (size >= num && num_of_bits < 32)
2023-09-25T21:01:52,461         |            ~~~~~^~~~~~
2023-09-25T21:01:52,462   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int sizeofints(int, unsigned int*)’:
2023-09-25T21:01:52,463   moleculekit/xtc_utils/src/xdrfile.cpp:505:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-09-25T21:01:52,463     505 |     while (bytes[num_of_bytes] >= num)
2023-09-25T21:01:52,464         |            ~~~~~~~~~~~~~~~~~~~~^~~~~~
2023-09-25T21:01:52,467   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘void encodeints(int*, int, int, unsigned int*, unsigned int*)’:
2023-09-25T21:01:52,468   moleculekit/xtc_utils/src/xdrfile.cpp:614:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-25T21:01:52,468     614 |     if (num_of_bits >= num_of_bytes * 8)
2023-09-25T21:01:52,469         |         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
2023-09-25T21:01:52,470   moleculekit/xtc_utils/src/xdrfile.cpp:616:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-25T21:01:52,470     616 |                 for (i = 0; i < num_of_bytes; i++)
2023-09-25T21:01:52,471         |                             ~~^~~~~~~~~~~~~~
2023-09-25T21:01:52,472   moleculekit/xtc_utils/src/xdrfile.cpp:624:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-25T21:01:52,473     624 |                 for (i = 0; i < num_of_bytes-1; i++)
2023-09-25T21:01:52,473         |                             ~~^~~~~~~~~~~~~~~~
2023-09-25T21:01:52,473   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int decodebits(int*, int)’:
2023-09-25T21:01:52,474   moleculekit/xtc_utils/src/xdrfile.cpp:664:30: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-09-25T21:01:52,474     664 |                 if (lastbits < num_of_bits)
2023-09-25T21:01:52,475         |                     ~~~~~~~~~^~~~~~~~~~~~~
2023-09-25T21:01:52,479   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_decompress_coord_float(float*, int*, float*, XDRFILE*)’:
2023-09-25T21:01:52,480   moleculekit/xtc_utils/src/xdrfile.cpp:785:17: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-09-25T21:01:52,480     785 |         if(size3>xfp->buf1size)
2023-09-25T21:01:52,481         |            ~~~~~^~~~~~~~~~~~~~
2023-09-25T21:01:52,483   moleculekit/xtc_utils/src/xdrfile.cpp:842:26: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-09-25T21:01:52,484     842 |         maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-09-25T21:01:52,485         |                          ^
2023-09-25T21:01:52,488   moleculekit/xtc_utils/src/xdrfile.cpp:932:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-25T21:01:52,489     932 |                                 if(countmjh >= size3 ) { return -1; }
2023-09-25T21:01:52,489         |                                    ~~~~~~~~~^~~~~~~~
2023-09-25T21:01:52,490   moleculekit/xtc_utils/src/xdrfile.cpp:935:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-25T21:01:52,491     935 |                                 if(countmjh >= size3 ) { return -1; }
2023-09-25T21:01:52,492         |                                    ~~~~~~~~~^~~~~~~~
2023-09-25T21:01:52,492   moleculekit/xtc_utils/src/xdrfile.cpp:938:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-25T21:01:52,493     938 |                                 if(countmjh >= size3 ) { return -1; }
2023-09-25T21:01:52,494         |                                    ~~~~~~~~~^~~~~~~~
2023-09-25T21:01:52,494   moleculekit/xtc_utils/src/xdrfile.cpp:945:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-25T21:01:52,495     945 |                                 if(countmjh >= size3 ) { return -1; }
2023-09-25T21:01:52,496         |                                    ~~~~~~~~~^~~~~~~~
2023-09-25T21:01:52,497   moleculekit/xtc_utils/src/xdrfile.cpp:948:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-25T21:01:52,497     948 |                                 if(countmjh >= size3 ) { return -1; }
2023-09-25T21:01:52,498         |                                    ~~~~~~~~~^~~~~~~~
2023-09-25T21:01:52,498   moleculekit/xtc_utils/src/xdrfile.cpp:951:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-25T21:01:52,499     951 |                                 if(countmjh >= size3 ) { return -1; }
2023-09-25T21:01:52,500         |                                    ~~~~~~~~~^~~~~~~~
2023-09-25T21:01:52,501   moleculekit/xtc_utils/src/xdrfile.cpp:756:24: warning: variable ‘minidx’ set but not used [-Wunused-but-set-variable]
2023-09-25T21:01:52,501     756 |         int smallidx,  minidx, maxidx;
2023-09-25T21:01:52,502         |                        ^~~~~~
2023-09-25T21:01:52,503   moleculekit/xtc_utils/src/xdrfile.cpp:759:32: warning: variable ‘larger’ set but not used [-Wunused-but-set-variable]
2023-09-25T21:01:52,503     759 |         int smallnum, smaller, larger, i, is_smaller, run;
2023-09-25T21:01:52,504         |                                ^~~~~~
2023-09-25T21:01:52,504   moleculekit/xtc_utils/src/xdrfile.cpp:763:13: warning: unused variable ‘errval’ [-Wunused-variable]
2023-09-25T21:01:52,505     763 |         int errval=1;
2023-09-25T21:01:52,505         |             ^~~~~~
2023-09-25T21:01:52,506   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_compress_coord_float(float*, int, float, XDRFILE*)’:
2023-09-25T21:01:52,506   moleculekit/xtc_utils/src/xdrfile.cpp:1011:17: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-09-25T21:01:52,507    1011 |         if(size3>xfp->buf1size)
2023-09-25T21:01:52,507         |            ~~~~~^~~~~~~~~~~~~~
2023-09-25T21:01:52,508   moleculekit/xtc_utils/src/xdrfile.cpp:1068:41: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-25T21:01:52,508    1068 |                 countmjh++; if( countmjh> size3) { return -1; }
2023-09-25T21:01:52,509         |                                 ~~~~~~~~^~~~~~~
2023-09-25T21:01:52,509   moleculekit/xtc_utils/src/xdrfile.cpp:1084:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-25T21:01:52,510    1084 |           countmjh++; if( countmjh> size3) { return -1; }
2023-09-25T21:01:52,510         |                           ~~~~~~~~^~~~~~~
2023-09-25T21:01:52,511   moleculekit/xtc_utils/src/xdrfile.cpp:1098:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-25T21:01:52,512    1098 |           countmjh++; if( countmjh> size3) { return -1; }
2023-09-25T21:01:52,513         |                           ~~~~~~~~^~~~~~~
2023-09-25T21:01:52,513   moleculekit/xtc_utils/src/xdrfile.cpp:1137:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-25T21:01:52,514    1137 |         while (smallidx < LASTIDX && magicints[smallidx] < mindiff)
2023-09-25T21:01:52,515         |                         ^
2023-09-25T21:01:52,515   moleculekit/xtc_utils/src/xdrfile.cpp:1143:26: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-09-25T21:01:52,516    1143 |         maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-09-25T21:01:52,517         |                          ^
2023-09-25T21:01:52,517   moleculekit/xtc_utils/src/xdrfile.cpp:1275:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-25T21:01:52,518    1275 |         if(tmp==(unsigned int)buf2[0])
2023-09-25T21:01:52,518         |            ~~~^~~~~~~~~~~~~~~~~~~~~~~
2023-09-25T21:01:52,519   moleculekit/xtc_utils/src/xdrfile.cpp:1001:13: warning: variable ‘errval’ set but not used [-Wunused-but-set-variable]
2023-09-25T21:01:52,520    1001 |         int errval;
2023-09-25T21:01:52,520         |             ^~~~~~
2023-09-25T21:01:52,521   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_decompress_coord_double(double*, int*, double*, XDRFILE*)’:
2023-09-25T21:01:52,521   moleculekit/xtc_utils/src/xdrfile.cpp:1316:17: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-09-25T21:01:52,522    1316 |         if(size3>xfp->buf1size)
2023-09-25T21:01:52,523         |            ~~~~~^~~~~~~~~~~~~~
2023-09-25T21:01:52,524   moleculekit/xtc_utils/src/xdrfile.cpp:1377:26: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-09-25T21:01:52,524    1377 |         maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-09-25T21:01:52,526         |                          ^
2023-09-25T21:01:52,526   moleculekit/xtc_utils/src/xdrfile.cpp:1289:32: warning: variable ‘minidx’ set but not used [-Wunused-but-set-variable]
2023-09-25T21:01:52,527    1289 |         int smallidx,  maxidx, minidx;
2023-09-25T21:01:52,527         |                                ^~~~~~
2023-09-25T21:01:52,527   moleculekit/xtc_utils/src/xdrfile.cpp:1292:32: warning: variable ‘larger’ set but not used [-Wunused-but-set-variable]
2023-09-25T21:01:52,528    1292 |         int smallnum, smaller, larger, i, is_smaller, run;
2023-09-25T21:01:52,528         |                                ^~~~~~
2023-09-25T21:01:52,529   moleculekit/xtc_utils/src/xdrfile.cpp:1297:13: warning: unused variable ‘errval’ [-Wunused-variable]
2023-09-25T21:01:52,529    1297 |         int errval=1;
2023-09-25T21:01:52,530         |             ^~~~~~
2023-09-25T21:01:52,530   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_compress_coord_double(double*, int, double, XDRFILE*)’:
2023-09-25T21:01:52,531   moleculekit/xtc_utils/src/xdrfile.cpp:1513:17: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-09-25T21:01:52,531    1513 |         if(size3>xfp->buf1size) {
2023-09-25T21:01:52,532         |            ~~~~~^~~~~~~~~~~~~~
2023-09-25T21:01:52,532   moleculekit/xtc_utils/src/xdrfile.cpp:1628:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-25T21:01:52,533    1628 |         while (smallidx < LASTIDX && magicints[smallidx] < mindiff) {
2023-09-25T21:01:52,534         |                         ^
2023-09-25T21:01:52,534   moleculekit/xtc_utils/src/xdrfile.cpp:1633:26: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-09-25T21:01:52,535    1633 |         maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-09-25T21:01:52,536         |                          ^
2023-09-25T21:01:52,536   moleculekit/xtc_utils/src/xdrfile.cpp:1743:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-25T21:01:52,537    1743 |         if(tmp==(unsigned int)buf2[0])
2023-09-25T21:01:52,537         |            ~~~^~~~~~~~~~~~~~~~~~~~~~~
2023-09-25T21:01:52,538   moleculekit/xtc_utils/src/xdrfile.cpp:1504:13: warning: variable ‘errval’ set but not used [-Wunused-but-set-variable]
2023-09-25T21:01:52,539    1504 |         int errval=1;
2023-09-25T21:01:52,539         |             ^~~~~~
2023-09-25T21:01:55,360   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/xtc_utils/src/xdrfile_xtc.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/xtc_utils/src/xdrfile_xtc.o
2023-09-25T21:01:55,624   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/xtc_utils/src/xtc.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/xtc_utils/src/xtc.o
2023-09-25T21:01:56,397   moleculekit/xtc_utils/src/xtc.cpp: In function ‘void xtc_read_new(char*, float*, float*, float*, int*, int, int)’:
2023-09-25T21:01:56,398   moleculekit/xtc_utils/src/xtc.cpp:207:13: warning: unused variable ‘nf3’ [-Wunused-variable]
2023-09-25T21:01:56,399     207 |         int nf3 = nframes * 3; // Precalculate 3 * nframes for the coordinate lookup macro
2023-09-25T21:01:56,401         |             ^~~
2023-09-25T21:01:56,408   moleculekit/xtc_utils/src/xtc.cpp: In function ‘int xtc_write(char*, int, int, int*, float*, float*, float*)’:
2023-09-25T21:01:56,409   moleculekit/xtc_utils/src/xtc.cpp:418:13: warning: unused variable ‘nf3’ [-Wunused-variable]
2023-09-25T21:01:56,410     418 |         int nf3 = nframes * 3;
2023-09-25T21:01:56,410         |             ^~~
2023-09-25T21:01:56,416   moleculekit/xtc_utils/src/xtc.cpp: In function ‘void xtc_read_frame(char*, float*, float*, float*, int*, int, int, int, int)’:
2023-09-25T21:01:56,417   moleculekit/xtc_utils/src/xtc.cpp:491:13: warning: unused variable ‘reading_index’ [-Wunused-variable]
2023-09-25T21:01:56,418     491 |         int reading_index = 0;
2023-09-25T21:01:56,418         |             ^~~~~~~~~~~~~
2023-09-25T21:01:56,419   moleculekit/xtc_utils/src/xtc.cpp:492:13: warning: unused variable ‘writing_index’ [-Wunused-variable]
2023-09-25T21:01:56,419     492 |         int writing_index = 0;
2023-09-25T21:01:56,420         |             ^~~~~~~~~~~~~
2023-09-25T21:01:57,296   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/xtc_utils/xtc.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/xtc_utils/xtc.o
2023-09-25T21:01:57,602   In file included from /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-09-25T21:01:57,603                    from /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-09-25T21:01:57,603                    from /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-09-25T21:01:57,604                    from moleculekit/xtc_utils/xtc.cpp:1196:
2023-09-25T21:01:57,604   /tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-09-25T21:01:57,605      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-09-25T21:01:57,605         |  ^~~~~~~
2023-09-25T21:02:21,556   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/xtc_utils/src/xdrfile.o build/temp.linux-armv7l-cpython-311/moleculekit/xtc_utils/src/xdrfile_xtc.o build/temp.linux-armv7l-cpython-311/moleculekit/xtc_utils/src/xtc.o build/temp.linux-armv7l-cpython-311/moleculekit/xtc_utils/xtc.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/xtc.cpython-311-arm-linux-gnueabihf.so
2023-09-25T21:02:21,838   building 'moleculekit.tmalign' extension
2023-09-25T21:02:21,839   creating build/temp.linux-armv7l-cpython-311/moleculekit/tmalign
2023-09-25T21:02:21,840   creating build/temp.linux-armv7l-cpython-311/moleculekit/tmalign/src
2023-09-25T21:02:21,842   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/tmalign -Imoleculekit/tmalign/include/ -Imoleculekit/tmalign/ -I/tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/tmalign/src/TMAlign.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/tmalign/src/TMAlign.o -w
2023-09-25T21:02:55,590   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/tmalign -Imoleculekit/tmalign/include/ -Imoleculekit/tmalign/ -I/tmp/pip-build-env-l1o8vx8g/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/tmalign/tmalign_util.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/tmalign/tmalign_util.o -w
2023-09-25T21:03:18,152   In file included from /usr/include/c++/12/vector:70,
2023-09-25T21:03:18,152                    from moleculekit/tmalign/tmalign_util.cpp:1207:
2023-09-25T21:03:18,153   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]’:
2023-09-25T21:03:18,153   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2023-09-25T21:03:18,154     439 |       vector<_Tp, _Alloc>::
2023-09-25T21:03:18,154         |       ^~~~~~~~~~~~~~~~~~~
2023-09-25T21:03:18,957   In file included from /usr/include/c++/12/vector:64:
2023-09-25T21:03:18,958   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2023-09-25T21:03:18,958       inlined from ‘PyObject* __pyx_pf_11moleculekit_7tmalign_tmalign(PyObject*, __Pyx_memviewslice, __Pyx_memviewslice, std::string, std::string)’ at moleculekit/tmalign/tmalign_util.cpp:20812:32,
2023-09-25T21:03:18,959       inlined from ‘PyObject* __pyx_pw_11moleculekit_7tmalign_1tmalign(PyObject*, PyObject* const*, Py_ssize_t, PyObject*)’ at moleculekit/tmalign/tmalign_util.cpp:20297:52:
2023-09-25T21:03:18,959   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2023-09-25T21:03:18,960    1287 |           _M_realloc_insert(end(), __x);
2023-09-25T21:03:18,960         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-09-25T21:03:18,961   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2023-09-25T21:03:18,962       inlined from ‘PyObject* __pyx_pf_11moleculekit_7tmalign_tmalign(PyObject*, __Pyx_memviewslice, __Pyx_memviewslice, std::string, std::string)’ at moleculekit/tmalign/tmalign_util.cpp:20826:33,
2023-09-25T21:03:18,962       inlined from ‘PyObject* __pyx_pw_11moleculekit_7tmalign_1tmalign(PyObject*, PyObject* const*, Py_ssize_t, PyObject*)’ at moleculekit/tmalign/tmalign_util.cpp:20297:52:
2023-09-25T21:03:18,963   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2023-09-25T21:03:18,964    1287 |           _M_realloc_insert(end(), __x);
2023-09-25T21:03:18,964         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-09-25T21:03:18,965   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2023-09-25T21:03:18,966       inlined from ‘PyObject* __pyx_pf_11moleculekit_7tmalign_tmalign(PyObject*, __Pyx_memviewslice, __Pyx_memviewslice, std::string, std::string)’ at moleculekit/tmalign/tmalign_util.cpp:20911:34,
2023-09-25T21:03:18,966       inlined from ‘PyObject* __pyx_pw_11moleculekit_7tmalign_1tmalign(PyObject*, PyObject* const*, Py_ssize_t, PyObject*)’ at moleculekit/tmalign/tmalign_util.cpp:20297:52:
2023-09-25T21:03:18,967   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2023-09-25T21:03:18,968    1287 |           _M_realloc_insert(end(), __x);
2023-09-25T21:03:18,968         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-09-25T21:03:21,354   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/tmalign/src/TMAlign.o build/temp.linux-armv7l-cpython-311/moleculekit/tmalign/tmalign_util.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/tmalign.cpython-311-arm-linux-gnueabihf.so
2023-09-25T21:03:21,735   UPDATING build/lib.linux-armv7l-cpython-311/moleculekit/_version.py
2023-09-25T21:03:21,736   set build/lib.linux-armv7l-cpython-311/moleculekit/_version.py to '1.7.4'
2023-09-25T21:03:21,737   installing to build/bdist.linux-armv7l/wheel
2023-09-25T21:03:21,737   running install
2023-09-25T21:03:21,761   running install_lib
2023-09-25T21:03:21,767   creating build/bdist.linux-armv7l
2023-09-25T21:03:21,768   creating build/bdist.linux-armv7l/wheel
2023-09-25T21:03:21,770   creating build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:21,772   creating build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-09-25T21:03:21,773   copying build/lib.linux-armv7l-cpython-311/moleculekit/ply/yacc.py -> build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-09-25T21:03:21,777   copying build/lib.linux-armv7l-cpython-311/moleculekit/ply/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-09-25T21:03:21,779   copying build/lib.linux-armv7l-cpython-311/moleculekit/ply/lex.py -> build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-09-25T21:03:21,782   copying build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser_utils.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:21,809   copying build/lib.linux-armv7l-cpython-311/moleculekit/periodictable.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:21,811   copying build/lib.linux-armv7l-cpython-311/moleculekit/home.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:21,813   copying build/lib.linux-armv7l-cpython-311/moleculekit/occupancy_utils.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:21,830   copying build/lib.linux-armv7l-cpython-311/moleculekit/rcsb.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:21,832   copying build/lib.linux-armv7l-cpython-311/moleculekit/pymolgraphics.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:21,833   copying build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:21,836   creating build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-09-25T21:03:21,837   copying build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/tmalign_util.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-09-25T21:03:21,839   creating build/bdist.linux-armv7l/wheel/moleculekit/tmalign/include
2023-09-25T21:03:21,840   copying build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/include/TMAlign.h -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign/include
2023-09-25T21:03:21,842   copying build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/tmalign_util.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-09-25T21:03:21,861   copying build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/tmalignlib.pxd -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-09-25T21:03:21,864   creating build/bdist.linux-armv7l/wheel/moleculekit/tmalign/src
2023-09-25T21:03:21,865   copying build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/src/TMAlign.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign/src
2023-09-25T21:03:21,870   copying build/lib.linux-armv7l-cpython-311/moleculekit/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:21,872   creating build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-09-25T21:03:21,874   creating build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-09-25T21:03:21,875   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/include/xdrfile.h -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-09-25T21:03:21,877   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/include/xdrfile_xtc.h -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-09-25T21:03:21,879   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/include/xtc.h -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-09-25T21:03:21,881   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/xtc.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-09-25T21:03:21,883   creating build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-09-25T21:03:21,884   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/src/xdrfile.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-09-25T21:03:21,887   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/src/xtc.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-09-25T21:03:21,889   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/src/xdrfile_xtc.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-09-25T21:03:21,891   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/xtc.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-09-25T21:03:21,910   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/xtclib.pxd -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-09-25T21:03:21,912   copying build/lib.linux-armv7l-cpython-311/moleculekit/wrapping.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:21,929   copying build/lib.linux-armv7l-cpython-311/moleculekit/molecule.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:21,933   copying build/lib.linux-armv7l-cpython-311/moleculekit/version.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:21,935   copying build/lib.linux-armv7l-cpython-311/moleculekit/writers.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:21,938   copying build/lib.linux-armv7l-cpython-311/moleculekit/distance.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:21,939   copying build/lib.linux-armv7l-cpython-311/moleculekit/vmdviewer.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:21,942   creating build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-09-25T21:03:21,943   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/atomtyper.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-09-25T21:03:21,945   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/voxeldescriptors.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-09-25T21:03:21,948   creating build/bdist.linux-armv7l/wheel/moleculekit/tools/obabel_tools
2023-09-25T21:03:21,949   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/obabel_tools/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools/obabel_tools
2023-09-25T21:03:21,951   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/obabel_tools/obabel_cli.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools/obabel_tools
2023-09-25T21:03:21,953   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/preparation.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-09-25T21:03:21,956   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-09-25T21:03:21,958   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/docking.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-09-25T21:03:21,960   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/sequencestructuralalignment.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-09-25T21:03:21,962   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/detect.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-09-25T21:03:21,965   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/autosegment.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-09-25T21:03:21,967   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/graphalignment.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-09-25T21:03:21,969   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/crystalpacking.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-09-25T21:03:21,972   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/preparation_customres.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-09-25T21:03:21,974   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/moleculechecks.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-09-25T21:03:21,976   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/hhblitsprofile.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-09-25T21:03:21,978   creating build/bdist.linux-armv7l/wheel/moleculekit/share
2023-09-25T21:03:21,979   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/ALA.cif -> build/bdist.linux-armv7l/wheel/moleculekit/share
2023-09-25T21:03:21,981   creating build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr
2023-09-25T21:03:21,986   creating build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:21,987   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/5JP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:21,989   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NAL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:21,990   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MMO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:21,992   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/03Y.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:21,994   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TPO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:21,996   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/OCY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:21,997   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/PRK.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,000   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MEN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,001   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/FGL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,003   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/M3L.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,005   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HTR.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,007   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MEN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,009   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HLX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,010   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/5JP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,012   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/D4P.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,014   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/IIL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,016   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ALN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,018   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,019   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NVA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,021   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/LME.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,023   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/GME.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,024   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/AHP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,026   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NCY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,028   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/M3L.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,029   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/YCM.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,031   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/OMX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,032   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/IML.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,034   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/1MH.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,036   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TY2.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,037   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/DAH.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,039   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CGU.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,040   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/0AF.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,042   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/4IN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,044   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/LMQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,046   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/IGL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,047   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,049   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HQA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,051   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NCY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,053   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/1MH.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,054   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/4PH.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,056   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HHK.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,058   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,060   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MEA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,061   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/LYZ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,063   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NLE.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,065   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,066   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/BCS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,068   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MLY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,069   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HYP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,071   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/0AF.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,073   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/2ML.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,075   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MLZ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,076   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/FGL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,078   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/4PH.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,080   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/GHG.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,082   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ESC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,084   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,086   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MME.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,087   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/2GX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,089   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/GNC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,091   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/PRK.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,092   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TRO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,094   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/2MR.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,096   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/I2M.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,098   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/BB8.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,099   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/4PQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,101   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ONL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,102   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ALY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,104   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/BCS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,106   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/0BN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,107   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/IML.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,109   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/BTK.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,111   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TYQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,113   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/2AS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,114   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/4PQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,116   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TPO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,118   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NZC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,119   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ONL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,121   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/GNC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,123   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HQA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,125   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/PTR.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,126   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HHK.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,128   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NLE.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,130   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/DA2.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,132   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MLZ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,134   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/IIL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,136   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,137   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/PTR.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,139   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ABA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,140   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MME.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,142   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,144   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MEQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,145   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ME0.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,147   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MLE.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,148   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MVA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,150   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/004.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,152   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/AA4.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,153   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ABA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,155   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HLX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,156   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/BTK.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,158   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/03Y.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,160   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NZC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,161   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/SEP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,163   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TYQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,165   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NVA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,166   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ORM.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,168   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/LMQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,170   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/BB8.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,172   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CCS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,173   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CCS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,175   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/.gitkeep -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,176   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/2GX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,178   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TY2.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,180   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HOX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,181   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ESC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,183   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/0A1.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,185   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MLE.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,187   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MEQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,188   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/YCM.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,190   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/2ML.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,192   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/GME.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,193   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HTR.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,195   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/DAB.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,197   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/KYN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,199   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HOX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,201   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MEA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,202   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ORM.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,204   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/PCA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,206   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/P1L.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,208   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/YNM.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,210   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/004.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,212   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/0BN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,214   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/OMX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,215   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/YNM.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,217   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/DAH.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,219   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/DAB.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,220   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MLY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,222   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/OCY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,224   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/I2M.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,226   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HPE.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,227   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/KYN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,229   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/DA2.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,231   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HYP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,232   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/LME.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,234   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ALC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,236   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/0A1.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,238   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/APD.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,240   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/DPP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,241   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NAL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,243   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/2MR.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,245   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/4IN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,247   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HLU.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,249   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/2AS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,250   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/GHG.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,253   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/AA4.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,254   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/LYZ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,256   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ALY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,258   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/P1L.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,259   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ALC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,261   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/PCA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,263   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MMO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,264   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/APD.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,266   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MVA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,268   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CGU.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,270   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,272   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ALN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,273   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/DPP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,275   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ME0.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,277   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/IGL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,279   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/SEP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,280   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HLU.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,282   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/D4P.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,284   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/AHP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,286   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HPE.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,288   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TRO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-25T21:03:22,289   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/backbone.cif -> build/bdist.linux-armv7l/wheel/moleculekit/share
2023-09-25T21:03:22,291   creating build/bdist.linux-armv7l/wheel/moleculekit/share/atomselect
2023-09-25T21:03:22,293   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/atomselect/atomselect.json -> build/bdist.linux-armv7l/wheel/moleculekit/share/atomselect
2023-09-25T21:03:22,294   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/opm_sequences.json -> build/bdist.linux-armv7l/wheel/moleculekit/share
2023-09-25T21:03:22,513   copying build/lib.linux-armv7l-cpython-311/moleculekit/vmd_wrapper -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:22,515   copying build/lib.linux-armv7l-cpython-311/moleculekit/vmdgraphics.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:22,517   copying build/lib.linux-armv7l-cpython-311/moleculekit/util.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:22,520   creating build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-25T21:03:22,521   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/projection.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-25T21:03:22,523   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metriccoordinate.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-25T21:03:22,526   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-25T21:03:22,528   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metrictmscore.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-25T21:03:22,530   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricgyration.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-25T21:03:22,533   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricshell.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-25T21:03:22,535   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/util.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-25T21:03:22,538   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricdihedral.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-25T21:03:22,541   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricplumed2.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-25T21:03:22,544   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricdistance.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-25T21:03:22,548   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricsecondarystructure.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-25T21:03:22,550   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricrmsd.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-25T21:03:22,553   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricsasa.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-25T21:03:22,555   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricsphericalcoordinate.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-25T21:03:22,558   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricfluctuation.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-25T21:03:22,560   copying build/lib.linux-armv7l-cpython-311/moleculekit/logging.ini -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:22,563   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx
2023-09-25T21:03:22,565   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-09-25T21:03:22,566   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests/PdbxReaderTests.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-09-25T21:03:22,569   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-09-25T21:03:22,571   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests/PdbxWriterTests.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-09-25T21:03:22,573   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests/PdbxReadWriteTests.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-09-25T21:03:22,576   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx
2023-09-25T21:03:22,578   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx/writer
2023-09-25T21:03:22,579   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/writer/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/writer
2023-09-25T21:03:22,581   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/writer/PdbxWriter.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/writer
2023-09-25T21:03:22,584   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-09-25T21:03:22,585   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader/PdbxReader.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-09-25T21:03:22,588   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-09-25T21:03:22,589   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader/PdbxContainers.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-09-25T21:03:22,592   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader/PdbxParser.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-09-25T21:03:22,595   copying build/lib.linux-armv7l-cpython-311/moleculekit/readers.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:22,600   creating build/bdist.linux-armv7l/wheel/moleculekit/occupancy_utils
2023-09-25T21:03:22,601   copying build/lib.linux-armv7l-cpython-311/moleculekit/occupancy_utils/occupancy_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/occupancy_utils
2023-09-25T21:03:22,603   copying build/lib.linux-armv7l-cpython-311/moleculekit/occupancy_utils/occupancy_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/occupancy_utils
2023-09-25T21:03:22,631   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:22,651   creating build/bdist.linux-armv7l/wheel/moleculekit/atomselect_utils
2023-09-25T21:03:22,652   copying build/lib.linux-armv7l-cpython-311/moleculekit/atomselect_utils/atomselect_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect_utils
2023-09-25T21:03:22,674   copying build/lib.linux-armv7l-cpython-311/moleculekit/atomselect_utils/atomselect_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect_utils
2023-09-25T21:03:22,677   copying build/lib.linux-armv7l-cpython-311/moleculekit/dihedral.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:22,678   copying build/lib.linux-armv7l-cpython-311/moleculekit/align.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:22,681   copying build/lib.linux-armv7l-cpython-311/moleculekit/atomselect_utils.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:22,707   copying build/lib.linux-armv7l-cpython-311/moleculekit/viewer.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:22,709   copying build/lib.linux-armv7l-cpython-311/moleculekit/tmalign.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:22,753   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-09-25T21:03:22,754   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-09-25T21:03:22,757   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/hbonds
2023-09-25T21:03:22,757   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/hbonds/hbonds.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/hbonds
2023-09-25T21:03:22,779   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/hbonds/hbonds.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/hbonds
2023-09-25T21:03:22,781   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/hbonds.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-09-25T21:03:22,804   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/sigmahole
2023-09-25T21:03:22,805   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole/sigmahole.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/sigmahole
2023-09-25T21:03:22,807   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole/sigmahole.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/sigmahole
2023-09-25T21:03:22,828   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/pipi
2023-09-25T21:03:22,829   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/pipi/pipi.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/pipi
2023-09-25T21:03:22,831   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/pipi/pipi.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/pipi
2023-09-25T21:03:22,852   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/interactions.py -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-09-25T21:03:22,854   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/pipi.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-09-25T21:03:22,876   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/cationpi
2023-09-25T21:03:22,877   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/cationpi/cationpi.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/cationpi
2023-09-25T21:03:22,879   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/cationpi/cationpi.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/cationpi
2023-09-25T21:03:22,899   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-09-25T21:03:22,918   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/cationpi.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-09-25T21:03:22,940   copying build/lib.linux-armv7l-cpython-311/moleculekit/config.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:22,942   creating build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-09-25T21:03:22,943   copying build/lib.linux-armv7l-cpython-311/moleculekit/atomselect/languageparser.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-09-25T21:03:22,945   copying build/lib.linux-armv7l-cpython-311/moleculekit/atomselect/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-09-25T21:03:22,947   copying build/lib.linux-armv7l-cpython-311/moleculekit/atomselect/analyze.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-09-25T21:03:22,949   copying build/lib.linux-armv7l-cpython-311/moleculekit/atomselect/atomselect.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-09-25T21:03:22,952   creating build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-09-25T21:03:22,953   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-09-25T21:03:22,956   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/smallmollib.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-09-25T21:03:22,959   creating build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-09-25T21:03:22,960   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools/clustering.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-09-25T21:03:22,963   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools/restrainedembed.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-09-25T21:03:22,965   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools/test_tools.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-09-25T21:03:22,968   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-09-25T21:03:22,970   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/smallmol.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-09-25T21:03:22,972   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/util.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-09-25T21:03:22,975   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/test_smallmollib.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-09-25T21:03:22,977   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/test_smallmol.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-09-25T21:03:22,979   creating build/bdist.linux-armv7l/wheel/moleculekit/wrapping
2023-09-25T21:03:22,980   copying build/lib.linux-armv7l-cpython-311/moleculekit/wrapping/wrapping.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/wrapping
2023-09-25T21:03:22,982   copying build/lib.linux-armv7l-cpython-311/moleculekit/wrapping/wrapping.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/wrapping
2023-09-25T21:03:23,008   copying build/lib.linux-armv7l-cpython-311/moleculekit/rdkitintegration.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:23,010   copying build/lib.linux-armv7l-cpython-311/moleculekit/_version.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:23,011   creating build/bdist.linux-armv7l/wheel/moleculekit/bondguesser_utils
2023-09-25T21:03:23,012   copying build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser_utils/bondguesser_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/bondguesser_utils
2023-09-25T21:03:23,032   copying build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser_utils/bondguesser_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/bondguesser_utils
2023-09-25T21:03:23,034   copying build/lib.linux-armv7l-cpython-311/moleculekit/opm.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:23,036   copying build/lib.linux-armv7l-cpython-311/moleculekit/distance_utils.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-25T21:03:23,059   creating build/bdist.linux-armv7l/wheel/moleculekit/distance_utils
2023-09-25T21:03:23,060   copying build/lib.linux-armv7l-cpython-311/moleculekit/distance_utils/distance_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/distance_utils
2023-09-25T21:03:23,081   copying build/lib.linux-armv7l-cpython-311/moleculekit/distance_utils/distance_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/distance_utils
2023-09-25T21:03:23,083   running install_egg_info
2023-09-25T21:03:23,089   Copying moleculekit.egg-info to build/bdist.linux-armv7l/wheel/moleculekit-1.7.4-py3.11.egg-info
2023-09-25T21:03:23,100   running install_scripts
2023-09-25T21:03:23,149   creating build/bdist.linux-armv7l/wheel/moleculekit-1.7.4.dist-info/WHEEL
2023-09-25T21:03:23,151   creating '/tmp/pip-wheel-w1s5b0mk/.tmp-3mi0k_dg/moleculekit-1.7.4-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-09-25T21:03:23,154   adding 'moleculekit/__init__.py'
2023-09-25T21:03:23,155   adding 'moleculekit/_version.py'
2023-09-25T21:03:23,157   adding 'moleculekit/align.py'
2023-09-25T21:03:23,481   adding 'moleculekit/atomselect_utils.cpython-311-arm-linux-gnueabihf.so'
2023-09-25T21:03:23,495   adding 'moleculekit/bondguesser.py'
2023-09-25T21:03:23,749   adding 'moleculekit/bondguesser_utils.cpython-311-arm-linux-gnueabihf.so'
2023-09-25T21:03:23,759   adding 'moleculekit/config.py'
2023-09-25T21:03:23,761   adding 'moleculekit/dihedral.py'
2023-09-25T21:03:23,762   adding 'moleculekit/distance.py'
2023-09-25T21:03:24,059   adding 'moleculekit/distance_utils.cpython-311-arm-linux-gnueabihf.so'
2023-09-25T21:03:24,071   adding 'moleculekit/home.py'
2023-09-25T21:03:24,073   adding 'moleculekit/logging.ini'
2023-09-25T21:03:24,085   adding 'moleculekit/molecule.py'
2023-09-25T21:03:24,312   adding 'moleculekit/occupancy_utils.cpython-311-arm-linux-gnueabihf.so'
2023-09-25T21:03:24,322   adding 'moleculekit/opm.py'
2023-09-25T21:03:24,324   adding 'moleculekit/periodictable.py'
2023-09-25T21:03:24,325   adding 'moleculekit/pymolgraphics.py'
2023-09-25T21:03:24,326   adding 'moleculekit/rcsb.py'
2023-09-25T21:03:24,328   adding 'moleculekit/rdkitintegration.py'
2023-09-25T21:03:24,339   adding 'moleculekit/readers.py'
2023-09-25T21:03:24,931   adding 'moleculekit/tmalign.cpython-311-arm-linux-gnueabihf.so'
2023-09-25T21:03:24,958   adding 'moleculekit/util.py'
2023-09-25T21:03:24,959   adding 'moleculekit/version.py'
2023-09-25T21:03:24,961   adding 'moleculekit/viewer.py'
2023-09-25T21:03:24,962   adding 'moleculekit/vmd_wrapper'
2023-09-25T21:03:24,964   adding 'moleculekit/vmdgraphics.py'
2023-09-25T21:03:24,966   adding 'moleculekit/vmdviewer.py'
2023-09-25T21:03:25,200   adding 'moleculekit/wrapping.cpython-311-arm-linux-gnueabihf.so'
2023-09-25T21:03:25,214   adding 'moleculekit/writers.py'
2023-09-25T21:03:25,473   adding 'moleculekit/xtc.cpython-311-arm-linux-gnueabihf.so'
2023-09-25T21:03:25,484   adding 'moleculekit/atomselect/__init__.py'
2023-09-25T21:03:25,485   adding 'moleculekit/atomselect/analyze.py'
2023-09-25T21:03:25,487   adding 'moleculekit/atomselect/atomselect.py'
2023-09-25T21:03:25,489   adding 'moleculekit/atomselect/languageparser.py'
2023-09-25T21:03:25,592   adding 'moleculekit/atomselect_utils/atomselect_utils.cpp'
2023-09-25T21:03:25,606   adding 'moleculekit/atomselect_utils/atomselect_utils.pyx'
2023-09-25T21:03:25,695   adding 'moleculekit/bondguesser_utils/bondguesser_utils.cpp'
2023-09-25T21:03:25,706   adding 'moleculekit/bondguesser_utils/bondguesser_utils.pyx'
2023-09-25T21:03:25,803   adding 'moleculekit/distance_utils/distance_utils.cpp'
2023-09-25T21:03:25,815   adding 'moleculekit/distance_utils/distance_utils.pyx'
2023-09-25T21:03:25,817   adding 'moleculekit/interactions/__init__.py'
2023-09-25T21:03:26,095   adding 'moleculekit/interactions/cationpi.cpython-311-arm-linux-gnueabihf.so'
2023-09-25T21:03:26,361   adding 'moleculekit/interactions/hbonds.cpython-311-arm-linux-gnueabihf.so'
2023-09-25T21:03:26,373   adding 'moleculekit/interactions/interactions.py'
2023-09-25T21:03:26,648   adding 'moleculekit/interactions/pipi.cpython-311-arm-linux-gnueabihf.so'
2023-09-25T21:03:26,932   adding 'moleculekit/interactions/sigmahole.cpython-311-arm-linux-gnueabihf.so'
2023-09-25T21:03:27,035   adding 'moleculekit/interactions/cationpi/cationpi.cpp'
2023-09-25T21:03:27,046   adding 'moleculekit/interactions/cationpi/cationpi.pyx'
2023-09-25T21:03:27,136   adding 'moleculekit/interactions/hbonds/hbonds.cpp'
2023-09-25T21:03:27,146   adding 'moleculekit/interactions/hbonds/hbonds.pyx'
2023-09-25T21:03:27,236   adding 'moleculekit/interactions/pipi/pipi.cpp'
2023-09-25T21:03:27,247   adding 'moleculekit/interactions/pipi/pipi.pyx'
2023-09-25T21:03:27,337   adding 'moleculekit/interactions/sigmahole/sigmahole.cpp'
2023-09-25T21:03:27,348   adding 'moleculekit/interactions/sigmahole/sigmahole.pyx'
2023-09-25T21:03:27,433   adding 'moleculekit/occupancy_utils/occupancy_utils.cpp'
2023-09-25T21:03:27,444   adding 'moleculekit/occupancy_utils/occupancy_utils.pyx'
2023-09-25T21:03:27,445   adding 'moleculekit/pdbx/__init__.py'
2023-09-25T21:03:27,449   adding 'moleculekit/pdbx/reader/PdbxContainers.py'
2023-09-25T21:03:27,451   adding 'moleculekit/pdbx/reader/PdbxParser.py'
2023-09-25T21:03:27,454   adding 'moleculekit/pdbx/reader/PdbxReader.py'
2023-09-25T21:03:27,455   adding 'moleculekit/pdbx/reader/__init__.py'
2023-09-25T21:03:27,457   adding 'moleculekit/pdbx/tests/PdbxReadWriteTests.py'
2023-09-25T21:03:27,458   adding 'moleculekit/pdbx/tests/PdbxReaderTests.py'
2023-09-25T21:03:27,460   adding 'moleculekit/pdbx/tests/PdbxWriterTests.py'
2023-09-25T21:03:27,461   adding 'moleculekit/pdbx/tests/__init__.py'
2023-09-25T21:03:27,462   adding 'moleculekit/pdbx/writer/PdbxWriter.py'
2023-09-25T21:03:27,463   adding 'moleculekit/pdbx/writer/__init__.py'
2023-09-25T21:03:27,465   adding 'moleculekit/ply/__init__.py'
2023-09-25T21:03:27,469   adding 'moleculekit/ply/lex.py'
2023-09-25T21:03:27,480   adding 'moleculekit/ply/yacc.py'
2023-09-25T21:03:27,483   adding 'moleculekit/projections/__init__.py'
2023-09-25T21:03:27,485   adding 'moleculekit/projections/metriccoordinate.py'
2023-09-25T21:03:27,488   adding 'moleculekit/projections/metricdihedral.py'
2023-09-25T21:03:27,492   adding 'moleculekit/projections/metricdistance.py'
2023-09-25T21:03:27,494   adding 'moleculekit/projections/metricfluctuation.py'
2023-09-25T21:03:27,495   adding 'moleculekit/projections/metricgyration.py'
2023-09-25T21:03:27,499   adding 'moleculekit/projections/metricplumed2.py'
2023-09-25T21:03:27,501   adding 'moleculekit/projections/metricrmsd.py'
2023-09-25T21:03:27,503   adding 'moleculekit/projections/metricsasa.py'
2023-09-25T21:03:27,505   adding 'moleculekit/projections/metricsecondarystructure.py'
2023-09-25T21:03:27,506   adding 'moleculekit/projections/metricshell.py'
2023-09-25T21:03:27,508   adding 'moleculekit/projections/metricsphericalcoordinate.py'
2023-09-25T21:03:27,509   adding 'moleculekit/projections/metrictmscore.py'
2023-09-25T21:03:27,510   adding 'moleculekit/projections/projection.py'
2023-09-25T21:03:27,512   adding 'moleculekit/projections/util.py'
2023-09-25T21:03:27,514   adding 'moleculekit/share/ALA.cif'
2023-09-25T21:03:27,515   adding 'moleculekit/share/backbone.cif'
2023-09-25T21:03:28,808   adding 'moleculekit/share/opm_sequences.json'
2023-09-25T21:03:28,917   adding 'moleculekit/share/atomselect/atomselect.json'
2023-09-25T21:03:28,922   adding 'moleculekit/share/pdb2pqr/residues/.gitkeep'
2023-09-25T21:03:28,923   adding 'moleculekit/share/pdb2pqr/residues/004.dat'
2023-09-25T21:03:28,924   adding 'moleculekit/share/pdb2pqr/residues/004.xml'
2023-09-25T21:03:28,925   adding 'moleculekit/share/pdb2pqr/residues/03Y.dat'
2023-09-25T21:03:28,927   adding 'moleculekit/share/pdb2pqr/residues/03Y.xml'
2023-09-25T21:03:28,928   adding 'moleculekit/share/pdb2pqr/residues/0A1.dat'
2023-09-25T21:03:28,929   adding 'moleculekit/share/pdb2pqr/residues/0A1.xml'
2023-09-25T21:03:28,930   adding 'moleculekit/share/pdb2pqr/residues/0AF.dat'
2023-09-25T21:03:28,932   adding 'moleculekit/share/pdb2pqr/residues/0AF.xml'
2023-09-25T21:03:28,933   adding 'moleculekit/share/pdb2pqr/residues/0BN.dat'
2023-09-25T21:03:28,934   adding 'moleculekit/share/pdb2pqr/residues/0BN.xml'
2023-09-25T21:03:28,935   adding 'moleculekit/share/pdb2pqr/residues/1MH.dat'
2023-09-25T21:03:28,936   adding 'moleculekit/share/pdb2pqr/residues/1MH.xml'
2023-09-25T21:03:28,938   adding 'moleculekit/share/pdb2pqr/residues/2AS.dat'
2023-09-25T21:03:28,939   adding 'moleculekit/share/pdb2pqr/residues/2AS.xml'
2023-09-25T21:03:28,940   adding 'moleculekit/share/pdb2pqr/residues/2GX.dat'
2023-09-25T21:03:28,941   adding 'moleculekit/share/pdb2pqr/residues/2GX.xml'
2023-09-25T21:03:28,943   adding 'moleculekit/share/pdb2pqr/residues/2ML.dat'
2023-09-25T21:03:28,944   adding 'moleculekit/share/pdb2pqr/residues/2ML.xml'
2023-09-25T21:03:28,945   adding 'moleculekit/share/pdb2pqr/residues/2MR.dat'
2023-09-25T21:03:28,946   adding 'moleculekit/share/pdb2pqr/residues/2MR.xml'
2023-09-25T21:03:28,947   adding 'moleculekit/share/pdb2pqr/residues/4IN.dat'
2023-09-25T21:03:28,949   adding 'moleculekit/share/pdb2pqr/residues/4IN.xml'
2023-09-25T21:03:28,950   adding 'moleculekit/share/pdb2pqr/residues/4PH.dat'
2023-09-25T21:03:28,951   adding 'moleculekit/share/pdb2pqr/residues/4PH.xml'
2023-09-25T21:03:28,952   adding 'moleculekit/share/pdb2pqr/residues/4PQ.dat'
2023-09-25T21:03:28,954   adding 'moleculekit/share/pdb2pqr/residues/4PQ.xml'
2023-09-25T21:03:28,955   adding 'moleculekit/share/pdb2pqr/residues/5JP.dat'
2023-09-25T21:03:28,956   adding 'moleculekit/share/pdb2pqr/residues/5JP.xml'
2023-09-25T21:03:28,957   adding 'moleculekit/share/pdb2pqr/residues/AA4.dat'
2023-09-25T21:03:28,958   adding 'moleculekit/share/pdb2pqr/residues/AA4.xml'
2023-09-25T21:03:28,959   adding 'moleculekit/share/pdb2pqr/residues/ABA.dat'
2023-09-25T21:03:28,960   adding 'moleculekit/share/pdb2pqr/residues/ABA.xml'
2023-09-25T21:03:28,961   adding 'moleculekit/share/pdb2pqr/residues/AHP.dat'
2023-09-25T21:03:28,962   adding 'moleculekit/share/pdb2pqr/residues/AHP.xml'
2023-09-25T21:03:28,964   adding 'moleculekit/share/pdb2pqr/residues/ALC.dat'
2023-09-25T21:03:28,965   adding 'moleculekit/share/pdb2pqr/residues/ALC.xml'
2023-09-25T21:03:28,966   adding 'moleculekit/share/pdb2pqr/residues/ALN.dat'
2023-09-25T21:03:28,967   adding 'moleculekit/share/pdb2pqr/residues/ALN.xml'
2023-09-25T21:03:28,968   adding 'moleculekit/share/pdb2pqr/residues/ALY.dat'
2023-09-25T21:03:28,970   adding 'moleculekit/share/pdb2pqr/residues/ALY.xml'
2023-09-25T21:03:28,971   adding 'moleculekit/share/pdb2pqr/residues/APD.dat'
2023-09-25T21:03:28,972   adding 'moleculekit/share/pdb2pqr/residues/APD.xml'
2023-09-25T21:03:28,973   adding 'moleculekit/share/pdb2pqr/residues/BB8.dat'
2023-09-25T21:03:28,974   adding 'moleculekit/share/pdb2pqr/residues/BB8.xml'
2023-09-25T21:03:28,975   adding 'moleculekit/share/pdb2pqr/residues/BCS.dat'
2023-09-25T21:03:28,977   adding 'moleculekit/share/pdb2pqr/residues/BCS.xml'
2023-09-25T21:03:28,978   adding 'moleculekit/share/pdb2pqr/residues/BTK.dat'
2023-09-25T21:03:28,979   adding 'moleculekit/share/pdb2pqr/residues/BTK.xml'
2023-09-25T21:03:28,980   adding 'moleculekit/share/pdb2pqr/residues/CCS.dat'
2023-09-25T21:03:28,981   adding 'moleculekit/share/pdb2pqr/residues/CCS.xml'
2023-09-25T21:03:28,982   adding 'moleculekit/share/pdb2pqr/residues/CGU.dat'
2023-09-25T21:03:28,984   adding 'moleculekit/share/pdb2pqr/residues/CGU.xml'
2023-09-25T21:03:28,985   adding 'moleculekit/share/pdb2pqr/residues/CSA.dat'
2023-09-25T21:03:28,986   adding 'moleculekit/share/pdb2pqr/residues/CSA.xml'
2023-09-25T21:03:28,987   adding 'moleculekit/share/pdb2pqr/residues/CSO.dat'
2023-09-25T21:03:28,989   adding 'moleculekit/share/pdb2pqr/residues/CSO.xml'
2023-09-25T21:03:28,990   adding 'moleculekit/share/pdb2pqr/residues/CSP.dat'
2023-09-25T21:03:28,991   adding 'moleculekit/share/pdb2pqr/residues/CSP.xml'
2023-09-25T21:03:28,992   adding 'moleculekit/share/pdb2pqr/residues/CSS.dat'
2023-09-25T21:03:28,994   adding 'moleculekit/share/pdb2pqr/residues/CSS.xml'
2023-09-25T21:03:28,995   adding 'moleculekit/share/pdb2pqr/residues/D4P.dat'
2023-09-25T21:03:28,996   adding 'moleculekit/share/pdb2pqr/residues/D4P.xml'
2023-09-25T21:03:28,997   adding 'moleculekit/share/pdb2pqr/residues/DA2.dat'
2023-09-25T21:03:28,999   adding 'moleculekit/share/pdb2pqr/residues/DA2.xml'
2023-09-25T21:03:29,000   adding 'moleculekit/share/pdb2pqr/residues/DAB.dat'
2023-09-25T21:03:29,001   adding 'moleculekit/share/pdb2pqr/residues/DAB.xml'
2023-09-25T21:03:29,002   adding 'moleculekit/share/pdb2pqr/residues/DAH.dat'
2023-09-25T21:03:29,004   adding 'moleculekit/share/pdb2pqr/residues/DAH.xml'
2023-09-25T21:03:29,005   adding 'moleculekit/share/pdb2pqr/residues/DPP.dat'
2023-09-25T21:03:29,006   adding 'moleculekit/share/pdb2pqr/residues/DPP.xml'
2023-09-25T21:03:29,008   adding 'moleculekit/share/pdb2pqr/residues/ESC.dat'
2023-09-25T21:03:29,010   adding 'moleculekit/share/pdb2pqr/residues/ESC.xml'
2023-09-25T21:03:29,011   adding 'moleculekit/share/pdb2pqr/residues/FGL.dat'
2023-09-25T21:03:29,013   adding 'moleculekit/share/pdb2pqr/residues/FGL.xml'
2023-09-25T21:03:29,014   adding 'moleculekit/share/pdb2pqr/residues/GHG.dat'
2023-09-25T21:03:29,015   adding 'moleculekit/share/pdb2pqr/residues/GHG.xml'
2023-09-25T21:03:29,017   adding 'moleculekit/share/pdb2pqr/residues/GME.dat'
2023-09-25T21:03:29,018   adding 'moleculekit/share/pdb2pqr/residues/GME.xml'
2023-09-25T21:03:29,019   adding 'moleculekit/share/pdb2pqr/residues/GNC.dat'
2023-09-25T21:03:29,020   adding 'moleculekit/share/pdb2pqr/residues/GNC.xml'
2023-09-25T21:03:29,021   adding 'moleculekit/share/pdb2pqr/residues/HHK.dat'
2023-09-25T21:03:29,022   adding 'moleculekit/share/pdb2pqr/residues/HHK.xml'
2023-09-25T21:03:29,023   adding 'moleculekit/share/pdb2pqr/residues/HLU.dat'
2023-09-25T21:03:29,025   adding 'moleculekit/share/pdb2pqr/residues/HLU.xml'
2023-09-25T21:03:29,026   adding 'moleculekit/share/pdb2pqr/residues/HLX.dat'
2023-09-25T21:03:29,027   adding 'moleculekit/share/pdb2pqr/residues/HLX.xml'
2023-09-25T21:03:29,028   adding 'moleculekit/share/pdb2pqr/residues/HOX.dat'
2023-09-25T21:03:29,029   adding 'moleculekit/share/pdb2pqr/residues/HOX.xml'
2023-09-25T21:03:29,030   adding 'moleculekit/share/pdb2pqr/residues/HPE.dat'
2023-09-25T21:03:29,031   adding 'moleculekit/share/pdb2pqr/residues/HPE.xml'
2023-09-25T21:03:29,032   adding 'moleculekit/share/pdb2pqr/residues/HQA.dat'
2023-09-25T21:03:29,034   adding 'moleculekit/share/pdb2pqr/residues/HQA.xml'
2023-09-25T21:03:29,035   adding 'moleculekit/share/pdb2pqr/residues/HTR.dat'
2023-09-25T21:03:29,036   adding 'moleculekit/share/pdb2pqr/residues/HTR.xml'
2023-09-25T21:03:29,037   adding 'moleculekit/share/pdb2pqr/residues/HYP.dat'
2023-09-25T21:03:29,038   adding 'moleculekit/share/pdb2pqr/residues/HYP.xml'
2023-09-25T21:03:29,039   adding 'moleculekit/share/pdb2pqr/residues/I2M.dat'
2023-09-25T21:03:29,042   adding 'moleculekit/share/pdb2pqr/residues/I2M.xml'
2023-09-25T21:03:29,044   adding 'moleculekit/share/pdb2pqr/residues/IGL.dat'
2023-09-25T21:03:29,045   adding 'moleculekit/share/pdb2pqr/residues/IGL.xml'
2023-09-25T21:03:29,046   adding 'moleculekit/share/pdb2pqr/residues/IIL.dat'
2023-09-25T21:03:29,047   adding 'moleculekit/share/pdb2pqr/residues/IIL.xml'
2023-09-25T21:03:29,048   adding 'moleculekit/share/pdb2pqr/residues/IML.dat'
2023-09-25T21:03:29,050   adding 'moleculekit/share/pdb2pqr/residues/IML.xml'
2023-09-25T21:03:29,051   adding 'moleculekit/share/pdb2pqr/residues/KYN.dat'
2023-09-25T21:03:29,052   adding 'moleculekit/share/pdb2pqr/residues/KYN.xml'
2023-09-25T21:03:29,053   adding 'moleculekit/share/pdb2pqr/residues/LME.dat'
2023-09-25T21:03:29,054   adding 'moleculekit/share/pdb2pqr/residues/LME.xml'
2023-09-25T21:03:29,055   adding 'moleculekit/share/pdb2pqr/residues/LMQ.dat'
2023-09-25T21:03:29,057   adding 'moleculekit/share/pdb2pqr/residues/LMQ.xml'
2023-09-25T21:03:29,058   adding 'moleculekit/share/pdb2pqr/residues/LYZ.dat'
2023-09-25T21:03:29,059   adding 'moleculekit/share/pdb2pqr/residues/LYZ.xml'
2023-09-25T21:03:29,060   adding 'moleculekit/share/pdb2pqr/residues/M3L.dat'
2023-09-25T21:03:29,062   adding 'moleculekit/share/pdb2pqr/residues/M3L.xml'
2023-09-25T21:03:29,063   adding 'moleculekit/share/pdb2pqr/residues/ME0.dat'
2023-09-25T21:03:29,064   adding 'moleculekit/share/pdb2pqr/residues/ME0.xml'
2023-09-25T21:03:29,065   adding 'moleculekit/share/pdb2pqr/residues/MEA.dat'
2023-09-25T21:03:29,066   adding 'moleculekit/share/pdb2pqr/residues/MEA.xml'
2023-09-25T21:03:29,068   adding 'moleculekit/share/pdb2pqr/residues/MEN.dat'
2023-09-25T21:03:29,069   adding 'moleculekit/share/pdb2pqr/residues/MEN.xml'
2023-09-25T21:03:29,070   adding 'moleculekit/share/pdb2pqr/residues/MEQ.dat'
2023-09-25T21:03:29,071   adding 'moleculekit/share/pdb2pqr/residues/MEQ.xml'
2023-09-25T21:03:29,072   adding 'moleculekit/share/pdb2pqr/residues/MLE.dat'
2023-09-25T21:03:29,074   adding 'moleculekit/share/pdb2pqr/residues/MLE.xml'
2023-09-25T21:03:29,075   adding 'moleculekit/share/pdb2pqr/residues/MLY.dat'
2023-09-25T21:03:29,076   adding 'moleculekit/share/pdb2pqr/residues/MLY.xml'
2023-09-25T21:03:29,077   adding 'moleculekit/share/pdb2pqr/residues/MLZ.dat'
2023-09-25T21:03:29,079   adding 'moleculekit/share/pdb2pqr/residues/MLZ.xml'
2023-09-25T21:03:29,080   adding 'moleculekit/share/pdb2pqr/residues/MME.dat'
2023-09-25T21:03:29,081   adding 'moleculekit/share/pdb2pqr/residues/MME.xml'
2023-09-25T21:03:29,082   adding 'moleculekit/share/pdb2pqr/residues/MMO.dat'
2023-09-25T21:03:29,084   adding 'moleculekit/share/pdb2pqr/residues/MMO.xml'
2023-09-25T21:03:29,085   adding 'moleculekit/share/pdb2pqr/residues/MVA.dat'
2023-09-25T21:03:29,086   adding 'moleculekit/share/pdb2pqr/residues/MVA.xml'
2023-09-25T21:03:29,087   adding 'moleculekit/share/pdb2pqr/residues/NAL.dat'
2023-09-25T21:03:29,088   adding 'moleculekit/share/pdb2pqr/residues/NAL.xml'
2023-09-25T21:03:29,089   adding 'moleculekit/share/pdb2pqr/residues/NCY.dat'
2023-09-25T21:03:29,090   adding 'moleculekit/share/pdb2pqr/residues/NCY.xml'
2023-09-25T21:03:29,091   adding 'moleculekit/share/pdb2pqr/residues/NLE.dat'
2023-09-25T21:03:29,093   adding 'moleculekit/share/pdb2pqr/residues/NLE.xml'
2023-09-25T21:03:29,094   adding 'moleculekit/share/pdb2pqr/residues/NVA.dat'
2023-09-25T21:03:29,095   adding 'moleculekit/share/pdb2pqr/residues/NVA.xml'
2023-09-25T21:03:29,096   adding 'moleculekit/share/pdb2pqr/residues/NZC.dat'
2023-09-25T21:03:29,097   adding 'moleculekit/share/pdb2pqr/residues/NZC.xml'
2023-09-25T21:03:29,098   adding 'moleculekit/share/pdb2pqr/residues/OCY.dat'
2023-09-25T21:03:29,099   adding 'moleculekit/share/pdb2pqr/residues/OCY.xml'
2023-09-25T21:03:29,101   adding 'moleculekit/share/pdb2pqr/residues/OMX.dat'
2023-09-25T21:03:29,102   adding 'moleculekit/share/pdb2pqr/residues/OMX.xml'
2023-09-25T21:03:29,103   adding 'moleculekit/share/pdb2pqr/residues/ONL.dat'
2023-09-25T21:03:29,104   adding 'moleculekit/share/pdb2pqr/residues/ONL.xml'
2023-09-25T21:03:29,105   adding 'moleculekit/share/pdb2pqr/residues/ORM.dat'
2023-09-25T21:03:29,106   adding 'moleculekit/share/pdb2pqr/residues/ORM.xml'
2023-09-25T21:03:29,108   adding 'moleculekit/share/pdb2pqr/residues/P1L.dat'
2023-09-25T21:03:29,109   adding 'moleculekit/share/pdb2pqr/residues/P1L.xml'
2023-09-25T21:03:29,110   adding 'moleculekit/share/pdb2pqr/residues/PCA.dat'
2023-09-25T21:03:29,111   adding 'moleculekit/share/pdb2pqr/residues/PCA.xml'
2023-09-25T21:03:29,113   adding 'moleculekit/share/pdb2pqr/residues/PRK.dat'
2023-09-25T21:03:29,114   adding 'moleculekit/share/pdb2pqr/residues/PRK.xml'
2023-09-25T21:03:29,115   adding 'moleculekit/share/pdb2pqr/residues/PTR.dat'
2023-09-25T21:03:29,116   adding 'moleculekit/share/pdb2pqr/residues/PTR.xml'
2023-09-25T21:03:29,117   adding 'moleculekit/share/pdb2pqr/residues/SEP.dat'
2023-09-25T21:03:29,119   adding 'moleculekit/share/pdb2pqr/residues/SEP.xml'
2023-09-25T21:03:29,120   adding 'moleculekit/share/pdb2pqr/residues/TPO.dat'
2023-09-25T21:03:29,121   adding 'moleculekit/share/pdb2pqr/residues/TPO.xml'
2023-09-25T21:03:29,122   adding 'moleculekit/share/pdb2pqr/residues/TRO.dat'
2023-09-25T21:03:29,124   adding 'moleculekit/share/pdb2pqr/residues/TRO.xml'
2023-09-25T21:03:29,125   adding 'moleculekit/share/pdb2pqr/residues/TY2.dat'
2023-09-25T21:03:29,126   adding 'moleculekit/share/pdb2pqr/residues/TY2.xml'
2023-09-25T21:03:29,127   adding 'moleculekit/share/pdb2pqr/residues/TYQ.dat'
2023-09-25T21:03:29,129   adding 'moleculekit/share/pdb2pqr/residues/TYQ.xml'
2023-09-25T21:03:29,130   adding 'moleculekit/share/pdb2pqr/residues/YCM.dat'
2023-09-25T21:03:29,131   adding 'moleculekit/share/pdb2pqr/residues/YCM.xml'
2023-09-25T21:03:29,132   adding 'moleculekit/share/pdb2pqr/residues/YNM.dat'
2023-09-25T21:03:29,134   adding 'moleculekit/share/pdb2pqr/residues/YNM.xml'
2023-09-25T21:03:29,135   adding 'moleculekit/smallmol/__init__.py'
2023-09-25T21:03:29,140   adding 'moleculekit/smallmol/smallmol.py'
2023-09-25T21:03:29,143   adding 'moleculekit/smallmol/smallmollib.py'
2023-09-25T21:03:29,145   adding 'moleculekit/smallmol/test_smallmol.py'
2023-09-25T21:03:29,147   adding 'moleculekit/smallmol/test_smallmollib.py'
2023-09-25T21:03:29,149   adding 'moleculekit/smallmol/util.py'
2023-09-25T21:03:29,150   adding 'moleculekit/smallmol/tools/__init__.py'
2023-09-25T21:03:29,152   adding 'moleculekit/smallmol/tools/clustering.py'
2023-09-25T21:03:29,154   adding 'moleculekit/smallmol/tools/restrainedembed.py'
2023-09-25T21:03:29,155   adding 'moleculekit/smallmol/tools/test_tools.py'
2023-09-25T21:03:29,243   adding 'moleculekit/tmalign/tmalign_util.cpp'
2023-09-25T21:03:29,254   adding 'moleculekit/tmalign/tmalign_util.pyx'
2023-09-25T21:03:29,255   adding 'moleculekit/tmalign/tmalignlib.pxd'
2023-09-25T21:03:29,257   adding 'moleculekit/tmalign/include/TMAlign.h'
2023-09-25T21:03:29,274   adding 'moleculekit/tmalign/src/TMAlign.cpp'
2023-09-25T21:03:29,277   adding 'moleculekit/tools/__init__.py'
2023-09-25T21:03:29,279   adding 'moleculekit/tools/atomtyper.py'
2023-09-25T21:03:29,281   adding 'moleculekit/tools/autosegment.py'
2023-09-25T21:03:29,283   adding 'moleculekit/tools/crystalpacking.py'
2023-09-25T21:03:29,285   adding 'moleculekit/tools/detect.py'
2023-09-25T21:03:29,287   adding 'moleculekit/tools/docking.py'
2023-09-25T21:03:29,289   adding 'moleculekit/tools/graphalignment.py'
2023-09-25T21:03:29,290   adding 'moleculekit/tools/hhblitsprofile.py'
2023-09-25T21:03:29,292   adding 'moleculekit/tools/moleculechecks.py'
2023-09-25T21:03:29,298   adding 'moleculekit/tools/preparation.py'
2023-09-25T21:03:29,300   adding 'moleculekit/tools/preparation_customres.py'
2023-09-25T21:03:29,302   adding 'moleculekit/tools/sequencestructuralalignment.py'
2023-09-25T21:03:29,305   adding 'moleculekit/tools/voxeldescriptors.py'
2023-09-25T21:03:29,307   adding 'moleculekit/tools/obabel_tools/__init__.py'
2023-09-25T21:03:29,308   adding 'moleculekit/tools/obabel_tools/obabel_cli.py'
2023-09-25T21:03:29,394   adding 'moleculekit/wrapping/wrapping.cpp'
2023-09-25T21:03:29,404   adding 'moleculekit/wrapping/wrapping.pyx'
2023-09-25T21:03:29,492   adding 'moleculekit/xtc_utils/xtc.cpp'
2023-09-25T21:03:29,502   adding 'moleculekit/xtc_utils/xtc.pyx'
2023-09-25T21:03:29,504   adding 'moleculekit/xtc_utils/xtclib.pxd'
2023-09-25T21:03:29,507   adding 'moleculekit/xtc_utils/include/xdrfile.h'
2023-09-25T21:03:29,508   adding 'moleculekit/xtc_utils/include/xdrfile_xtc.h'
2023-09-25T21:03:29,509   adding 'moleculekit/xtc_utils/include/xtc.h'
2023-09-25T21:03:29,516   adding 'moleculekit/xtc_utils/src/xdrfile.cpp'
2023-09-25T21:03:29,518   adding 'moleculekit/xtc_utils/src/xdrfile_xtc.cpp'
2023-09-25T21:03:29,520   adding 'moleculekit/xtc_utils/src/xtc.cpp'
2023-09-25T21:03:29,522   adding 'moleculekit-1.7.4.dist-info/LICENSE'
2023-09-25T21:03:29,523   adding 'moleculekit-1.7.4.dist-info/METADATA'
2023-09-25T21:03:29,524   adding 'moleculekit-1.7.4.dist-info/WHEEL'
2023-09-25T21:03:29,525   adding 'moleculekit-1.7.4.dist-info/top_level.txt'
2023-09-25T21:03:29,530   adding 'moleculekit-1.7.4.dist-info/RECORD'
2023-09-25T21:03:29,679   removing build/bdist.linux-armv7l/wheel
2023-09-25T21:03:29,954   Building wheel for moleculekit (pyproject.toml): finished with status 'done'
2023-09-25T21:03:30,305   Created wheel for moleculekit: filename=moleculekit-1.7.4-cp311-cp311-linux_armv7l.whl size=12836237 sha256=27adcded6091a46c83241ecb55d2a6b31825be09fc4a4a5e2db47c3a0bef20f3
2023-09-25T21:03:30,306   Stored in directory: /tmp/pip-ephem-wheel-cache-ywwf1efn/wheels/dc/63/c1/ec5b5165e5d52041b52f511acd6e0e4b66c3605a4413d4ddd5
2023-09-25T21:03:30,339 Successfully built moleculekit
2023-09-25T21:03:30,661 Removed build tracker: '/tmp/pip-build-tracker-2401rora'