2023-09-25T22:55:37,903 Created temporary directory: /tmp/pip-build-tracker-k2h3s1oe 2023-09-25T22:55:37,905 Initialized build tracking at /tmp/pip-build-tracker-k2h3s1oe 2023-09-25T22:55:37,905 Created build tracker: /tmp/pip-build-tracker-k2h3s1oe 2023-09-25T22:55:37,906 Entered build tracker: /tmp/pip-build-tracker-k2h3s1oe 2023-09-25T22:55:37,906 Created temporary directory: /tmp/pip-wheel-vudk3flt 2023-09-25T22:55:37,910 Created temporary directory: /tmp/pip-ephem-wheel-cache-x3olechn 2023-09-25T22:55:37,935 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-25T22:55:37,939 2 location(s) to search for versions of pyft: 2023-09-25T22:55:37,939 * https://pypi.org/simple/pyft/ 2023-09-25T22:55:37,939 * https://www.piwheels.org/simple/pyft/ 2023-09-25T22:55:37,940 Fetching project page and analyzing links: https://pypi.org/simple/pyft/ 2023-09-25T22:55:37,941 Getting page https://pypi.org/simple/pyft/ 2023-09-25T22:55:37,942 Found index url https://pypi.org/simple/ 2023-09-25T22:55:38,194 Fetched page https://pypi.org/simple/pyft/ as application/vnd.pypi.simple.v1+json 2023-09-25T22:55:38,199 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/d7/62/f180b758be35243ef8a74361f533c974f7294541f16c9bc82cdcc29983e0/pyft-0.1.0-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-09-25T22:55:38,200 Found link https://files.pythonhosted.org/packages/c5/b3/4729bed033d7a353ec71381fa9e1ade1bf7a186a837ed3627b31265ddede/pyft-0.1.0.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.0 2023-09-25T22:55:38,201 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/cb/27/9e42da52a20d9b691ef37a8828764cd904af507b9107a386d55614566304/pyft-0.1.1-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-09-25T22:55:38,201 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/42/ec/1bf1615986fee7e2940dcd8902ef14457658d94208b01d95549253b62843/pyft-0.1.2-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-09-25T22:55:38,202 Found link https://files.pythonhosted.org/packages/0a/0b/139d65d937bc185b68d3eff484ce5c3ca5e3bfc3150b2020d0b604b64d66/pyft-0.1.2.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.2 2023-09-25T22:55:38,203 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/04/9b/b53f6e949dabc348f4bf60f9d11a473764e589d6041be074cbcf20a42900/pyft-0.1.3-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-09-25T22:55:38,204 Found link https://files.pythonhosted.org/packages/ab/26/5c78ed72341a5f6b18d9f84a1e9bc91739519c613d9051f732bf902f363d/pyft-0.1.3.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.3 2023-09-25T22:55:38,205 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/5f/76/cfcbbab37550bc51a7e8ea1bc59451ae618fb3eab2f20f7aa097bc615268/pyft-0.1.4-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-09-25T22:55:38,206 Found link https://files.pythonhosted.org/packages/c0/f0/c6f569449c4bbc95ba0281b2423d2c22fd957a7279f33b74ebd6aa94fefb/pyft-0.1.4.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.4 2023-09-25T22:55:38,206 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/b3/d8/e0bcc1d4dda64ccb39a697d7a2cf2f0afc1edddea2f97aa3b7351ada002d/pyft-0.1.5-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-09-25T22:55:38,207 Found link https://files.pythonhosted.org/packages/02/93/e6e05f3380af83b5c4b010925934d31dba5527b59d0f256aef8bd6b6b0d1/pyft-0.1.5.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.5 2023-09-25T22:55:38,208 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/7f/54/78d366d8c40d15e7e6ea673715003e9d3a1799bec389136fd3646cd2ee41/pyft-0.1.6-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-09-25T22:55:38,209 Found link https://files.pythonhosted.org/packages/a3/a5/862a667ea22060468fbb9a217ce8d25c4eda9ff6c64b79f5887e7d4123be/pyft-0.1.6.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.6 2023-09-25T22:55:38,210 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/ba/62/742233e64de296bde6230c31c8ac312c38ca40fa09f10cb36f8c3da3ba1b/pyft-0.1.7-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-09-25T22:55:38,211 Found link https://files.pythonhosted.org/packages/26/f9/bfc6b3b66cd901649cf13ea23361c69321e46ed3b1fe73981863371c14ea/pyft-0.1.7.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.7 2023-09-25T22:55:38,211 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/0b/b9/8bdacd074d2a6f38e3c2c3508cb1ddd1d1c00963e365f44c979bbd8c4df0/pyft-0.1.8-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-09-25T22:55:38,212 Found link https://files.pythonhosted.org/packages/ce/e7/c55525cdea4a7421cd6f08f16b85d094a3f95578f8d410ae6849e20ae1aa/pyft-0.1.8.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.8 2023-09-25T22:55:38,213 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/aa/81/12871893127d02cf1d8ad68c808878816523e038fbd8fc69ef390b2d3069/pyft-0.1.9-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-09-25T22:55:38,214 Found link https://files.pythonhosted.org/packages/1e/7e/215d26ce7f6964e59e74252153d7c41d6ffa58f372bc2180bf9365f86a70/pyft-0.1.9.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.9 2023-09-25T22:55:38,215 Fetching project page and analyzing links: https://www.piwheels.org/simple/pyft/ 2023-09-25T22:55:38,216 Getting page https://www.piwheels.org/simple/pyft/ 2023-09-25T22:55:38,217 Found index url https://www.piwheels.org/simple/ 2023-09-25T22:55:38,375 Fetched page https://www.piwheels.org/simple/pyft/ as text/html 2023-09-25T22:55:38,376 Skipping link: not a file: https://www.piwheels.org/simple/pyft/ 2023-09-25T22:55:38,377 Skipping link: not a file: https://pypi.org/simple/pyft/ 2023-09-25T22:55:38,396 Given no hashes to check 1 links for project 'pyft': discarding no candidates 2023-09-25T22:55:38,414 Collecting pyft==0.1.0 2023-09-25T22:55:38,416 Created temporary directory: /tmp/pip-unpack-ues_ohgb 2023-09-25T22:55:38,650 Downloading pyft-0.1.0.tar.gz (8.3 MB) 2023-09-25T22:55:41,327 Added pyft==0.1.0 from https://files.pythonhosted.org/packages/c5/b3/4729bed033d7a353ec71381fa9e1ade1bf7a186a837ed3627b31265ddede/pyft-0.1.0.tar.gz to build tracker '/tmp/pip-build-tracker-k2h3s1oe' 2023-09-25T22:55:41,332 Created temporary directory: /tmp/pip-build-env-bajv9rsu 2023-09-25T22:55:41,336 Installing build dependencies: started 2023-09-25T22:55:41,337 Running command pip subprocess to install build dependencies 2023-09-25T22:55:42,476 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-09-25T22:55:42,976 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-25T22:55:44,272 Collecting maturin<2.0,>=1.1 2023-09-25T22:55:44,273 Obtaining dependency information for maturin<2.0,>=1.1 from https://files.pythonhosted.org/packages/c1/22/4e716c0dfe799391176605ee4175c9dd1562dd057bb44f0358a365b6d8ce/maturin-1.2.3-py3-none-manylinux_2_17_armv7l.manylinux2014_armv7l.musllinux_1_1_armv7l.whl.metadata 2023-09-25T22:55:44,279 Using cached maturin-1.2.3-py3-none-manylinux_2_17_armv7l.manylinux2014_armv7l.musllinux_1_1_armv7l.whl.metadata (18 kB) 2023-09-25T22:55:44,431 Using cached maturin-1.2.3-py3-none-manylinux_2_17_armv7l.manylinux2014_armv7l.musllinux_1_1_armv7l.whl (9.2 MB) 2023-09-25T22:55:48,308 Installing collected packages: maturin 2023-09-25T22:55:49,024 Successfully installed maturin-1.2.3 2023-09-25T22:55:49,614 Installing build dependencies: finished with status 'done' 2023-09-25T22:55:49,618 Getting requirements to build wheel: started 2023-09-25T22:55:49,619 Running command Getting requirements to build wheel 2023-09-25T22:55:49,835 Getting requirements to build wheel: finished with status 'done' 2023-09-25T22:55:49,838 Created temporary directory: /tmp/pip-modern-metadata-guftknul 2023-09-25T22:55:49,840 Preparing metadata (pyproject.toml): started 2023-09-25T22:55:49,841 Running command Preparing metadata (pyproject.toml) 2023-09-25T22:55:50,499 Updating crates.io index 2023-09-25T22:55:54,186 Downloading crates ... 2023-09-25T22:55:55,214 Downloaded colored v2.0.4 2023-09-25T22:55:55,281 Downloaded clap v4.3.17 2023-09-25T22:55:56,215 Downloaded editdistancek v1.0.2 2023-09-25T22:55:56,345 Downloaded openssl-src v111.26.0+1.1.1u 2023-09-25T22:56:00,953 Downloaded gzp v0.11.3 2023-09-25T22:56:01,211 Downloaded curl-sys v0.4.63+curl-8.1.2 2023-09-25T22:56:06,338 Downloaded hts-sys v2.1.1 2023-09-25T22:56:07,947 Downloaded serde_derive v1.0.172 2023-09-25T22:56:08,011 Downloaded libz-sys v1.1.9 2023-09-25T22:56:08,907 Downloaded libdeflate-sys v0.12.0 2023-09-25T22:56:09,079 Downloaded ieee754 v0.2.6 2023-09-25T22:56:09,121 Downloaded rust-htslib v0.43.1 2023-09-25T22:56:09,201 Downloaded quick-error v1.2.3 2023-09-25T22:56:09,225 Downloaded portable-atomic v1.4.1 2023-09-25T22:56:09,542 Downloaded lzma-sys v0.1.20 2023-09-25T22:56:10,137 Downloaded fuchsia-cprng v0.1.1 2023-09-25T22:56:10,146 Downloaded serde v1.0.172 2023-09-25T22:56:10,197 Downloaded gbdt v0.1.1 2023-09-25T22:56:10,233 Downloaded bio-types v1.0.0 2023-09-25T22:56:10,262 Downloaded cloudabi v0.0.3 2023-09-25T22:56:10,273 Downloaded libdeflater v0.12.0 2023-09-25T22:56:10,306 Downloaded wide v0.7.11 2023-09-25T22:56:10,384 Downloaded terminal_size v0.2.6 2023-09-25T22:56:10,405 Downloaded strum v0.25.0 2023-09-25T22:56:10,415 Downloaded safe_arch v0.7.1 2023-09-25T22:56:10,498 Downloaded rustversion v1.0.14 2023-09-25T22:56:10,541 Downloaded rustix v0.38.4 2023-09-25T22:56:10,992 Downloaded rand_xorshift v0.1.1 2023-09-25T22:56:11,007 Downloaded rand_hc v0.1.0 2023-09-25T22:56:11,023 Downloaded rand_core v0.3.1 2023-09-25T22:56:11,043 Downloaded rand_chacha v0.1.1 2023-09-25T22:56:11,059 Downloaded rand_os v0.1.3 2023-09-25T22:56:11,092 Downloaded clap_mangen v0.2.12 2023-09-25T22:56:11,111 Downloaded rdrand v0.4.0 2023-09-25T22:56:11,128 Downloaded rand_jitter v0.1.4 2023-09-25T22:56:11,151 Downloaded ordered-float v3.7.0 2023-09-25T22:56:11,171 Downloaded core_affinity v0.8.0 2023-09-25T22:56:11,187 Downloaded anyhow v1.0.72 2023-09-25T22:56:11,250 Downloaded is-terminal v0.4.9 2023-09-25T22:56:11,264 Downloaded fs-utils v1.1.4 2023-09-25T22:56:11,276 Downloaded rand_core v0.4.2 2023-09-25T22:56:11,297 Downloaded linux-raw-sys v0.4.3 2023-09-25T22:56:11,926 Downloaded indicatif v0.17.5 2023-09-25T22:56:11,987 Downloaded clap_builder v4.3.17 2023-09-25T22:56:12,097 Downloaded bio v1.3.1 2023-09-25T22:56:12,239 Downloaded autocfg v0.1.8 2023-09-25T22:56:12,252 Downloaded env_logger v0.9.3 2023-09-25T22:56:12,288 Downloaded clap_complete v4.3.2 2023-09-25T22:56:12,323 Downloaded bitflags v2.3.3 2023-09-25T22:56:12,365 Downloaded clap_derive v4.3.12 2023-09-25T22:56:12,398 Downloaded linear-map v1.2.0 2023-09-25T22:56:12,421 Downloaded hermit-abi v0.1.19 2023-09-25T22:56:12,437 Downloaded roff v0.2.1 2023-09-25T22:56:12,450 Downloaded rand_pcg v0.1.2 2023-09-25T22:56:12,470 Downloaded rand_isaac v0.1.1 2023-09-25T22:56:12,493 Downloaded rand v0.6.5 2023-09-25T22:56:12,592 Downloaded atty v0.2.14 2023-09-25T22:56:12,702 🔗 Found pyo3 bindings 2023-09-25T22:56:12,977 🐍 Found CPython 3.11 at /usr/bin/python3 2023-09-25T22:56:12,978 📡 Using build options features from pyproject.toml 2023-09-25T22:56:12,989 pyft-0.1.0.dist-info 2023-09-25T22:56:12,990 Checking for Rust toolchain.... 2023-09-25T22:56:12,990 Running `maturin pep517 write-dist-info --metadata-directory /tmp/pip-modern-metadata-guftknul --interpreter /usr/bin/python3` 2023-09-25T22:56:13,012 Preparing metadata (pyproject.toml): finished with status 'done' 2023-09-25T22:56:13,017 Source in /tmp/pip-wheel-vudk3flt/pyft_411c486bebb143f088a9dae404e6a871 has version 0.1.0, which satisfies requirement pyft==0.1.0 from https://files.pythonhosted.org/packages/c5/b3/4729bed033d7a353ec71381fa9e1ade1bf7a186a837ed3627b31265ddede/pyft-0.1.0.tar.gz 2023-09-25T22:56:13,018 Removed pyft==0.1.0 from https://files.pythonhosted.org/packages/c5/b3/4729bed033d7a353ec71381fa9e1ade1bf7a186a837ed3627b31265ddede/pyft-0.1.0.tar.gz from build tracker '/tmp/pip-build-tracker-k2h3s1oe' 2023-09-25T22:56:13,022 Created temporary directory: /tmp/pip-unpack-l3qdmdh6 2023-09-25T22:56:13,023 Created temporary directory: /tmp/pip-unpack-s97vn2o4 2023-09-25T22:56:13,026 Building wheels for collected packages: pyft 2023-09-25T22:56:13,030 Created temporary directory: /tmp/pip-wheel-5hwdoy8j 2023-09-25T22:56:13,030 Destination directory: /tmp/pip-wheel-5hwdoy8j 2023-09-25T22:56:13,032 Building wheel for pyft (pyproject.toml): started 2023-09-25T22:56:13,033 Running command Building wheel for pyft (pyproject.toml) 2023-09-25T22:56:13,200 Running `maturin pep517 build-wheel -i /usr/bin/python3 --compatibility off` 2023-09-25T22:56:14,207 🔗 Found pyo3 bindings 2023-09-25T22:56:14,483 🐍 Found CPython 3.11 at /usr/bin/python3 2023-09-25T22:56:14,484 📡 Using build options features from pyproject.toml 2023-09-25T22:56:16,162 Compiling autocfg v1.1.0 2023-09-25T22:56:16,163 Compiling libc v0.2.147 2023-09-25T22:56:16,164 Compiling proc-macro2 v1.0.66 2023-09-25T22:56:16,164 Compiling unicode-ident v1.0.11 2023-09-25T22:56:19,120 Compiling cfg-if v1.0.0 2023-09-25T22:56:19,275 Compiling pkg-config v0.3.27 2023-09-25T22:56:25,250 Compiling quote v1.0.31 2023-09-25T22:56:25,418 Compiling syn v1.0.109 2023-09-25T22:56:27,415 Compiling syn v2.0.26 2023-09-25T22:56:28,287 Compiling jobserver v0.1.26 2023-09-25T22:56:31,478 Compiling cc v1.0.79 2023-09-25T22:56:42,552 Compiling libm v0.2.7 2023-09-25T22:56:43,671 Compiling num-traits v0.2.15 2023-09-25T22:56:43,828 Compiling memchr v2.5.0 2023-09-25T22:56:46,181 Compiling cmake v0.1.50 2023-09-25T22:56:49,738 Compiling libz-sys v1.1.9 2023-09-25T22:57:04,460 Compiling scopeguard v1.2.0 2023-09-25T22:57:07,258 Compiling getrandom v0.2.10 2023-09-25T22:57:08,938 Compiling openssl-src v111.26.0+1.1.1u 2023-09-25T22:57:10,758 Compiling autocfg v0.1.8 2023-09-25T22:57:10,938 Compiling heck v0.4.1 2023-09-25T22:57:12,409 Compiling target-lexicon v0.12.10 2023-09-25T22:57:16,547 Compiling rand_core v0.4.2 2023-09-25T22:57:18,244 Compiling rustix v0.38.4 2023-09-25T22:57:19,534 Compiling openssl-sys v0.9.90 2023-09-25T22:57:21,351 Compiling aho-corasick v1.0.2 2023-09-25T22:57:23,521 Compiling serde v1.0.172 2023-09-25T22:57:25,359 Compiling thiserror v1.0.43 2023-09-25T22:57:27,048 Compiling regex-syntax v0.7.4 2023-09-25T22:57:34,085 Compiling bitflags v2.3.3 2023-09-25T22:57:36,355 Compiling linux-raw-sys v0.4.3 2023-09-25T22:57:44,627 Compiling io-lifetimes v1.0.11 2023-09-25T22:57:46,632 Compiling lazy_static v1.4.0 2023-09-25T22:57:47,427 Compiling regex-automata v0.3.3 2023-09-25T22:58:06,089 Compiling serde_derive v1.0.172 2023-09-25T22:58:47,713 Compiling thiserror-impl v1.0.43 2023-09-25T22:58:51,928 Compiling memoffset v0.9.0 2023-09-25T22:58:53,106 Compiling lock_api v0.4.10 2023-09-25T22:58:54,295 Compiling rustversion v1.0.14 2023-09-25T22:58:56,558 Compiling version_check v0.9.4 2023-09-25T22:58:59,230 Compiling crossbeam-utils v0.8.16 2023-09-25T22:59:00,976 Compiling semver v0.1.20 2023-09-25T22:59:01,656 Compiling rustix v0.37.23 2023-09-25T22:59:03,576 Compiling rustc_version v0.1.7 2023-09-25T22:59:05,323 Compiling regex v1.9.1 2023-09-25T22:59:22,499 Compiling pyo3-build-config v0.19.1 2023-09-25T22:59:30,063 Compiling is-terminal v0.4.9 2023-09-25T22:59:30,857 Compiling bzip2-sys v0.1.11+1.0.8 2023-09-25T22:59:32,685 Compiling lzma-sys v0.1.20 2023-09-25T22:59:36,963 Compiling curl-sys v0.4.63+curl-8.1.2 2023-09-25T22:59:40,170 Compiling num-integer v0.1.45 2023-09-25T22:59:41,332 Compiling tinyvec_macros v0.1.1 2023-09-25T22:59:41,506 Compiling quick-error v1.2.3 2023-09-25T22:59:41,810 Compiling bitflags v1.3.2 2023-09-25T22:59:41,995 Compiling linux-raw-sys v0.3.8 2023-09-25T22:59:47,163 Compiling fs-utils v1.1.4 2023-09-25T22:59:48,304 Compiling tinyvec v1.6.0 2023-09-25T23:00:18,119 Compiling newtype_derive v0.1.6 2023-09-25T23:00:25,048 Compiling rand_core v0.3.1 2023-09-25T23:00:25,199 Compiling rand_core v0.6.4 2023-09-25T23:00:27,001 Compiling num_cpus v1.16.0 2023-09-25T23:00:30,709 Compiling matrixmultiply v0.3.7 2023-09-25T23:00:31,935 Compiling crossbeam-epoch v0.9.15 2023-09-25T23:00:33,687 Compiling once_cell v1.18.0 2023-09-25T23:00:38,230 Compiling bytemuck v1.13.1 2023-09-25T23:00:38,330 Compiling ppv-lite86 v0.2.17 2023-09-25T23:00:38,478 Compiling paste v1.0.14 2023-09-25T23:00:39,973 Compiling byteorder v1.4.3 2023-09-25T23:00:40,151 Compiling crc32fast v1.3.2 2023-09-25T23:00:41,344 Compiling glob v0.3.1 2023-09-25T23:00:41,942 Compiling utf8parse v0.2.1 2023-09-25T23:00:42,426 Compiling anstyle-parse v0.2.1 2023-09-25T23:00:42,800 Compiling rand_chacha v0.3.1 2023-09-25T23:00:44,067 Compiling safe_arch v0.7.1 2023-09-25T23:00:45,884 Compiling hts-sys v2.1.1 2023-09-25T23:00:48,623 Compiling strum_macros v0.24.3 2023-09-25T23:00:53,904 Compiling unicode-normalization v0.1.22 2023-09-25T23:00:54,855 Compiling proc-macro-error-attr v1.0.4 2023-09-25T23:00:56,014 Compiling derive-new v0.5.9 2023-09-25T23:00:59,410 Compiling num-complex v0.4.3 2023-09-25T23:01:01,782 Compiling libdeflate-sys v0.12.0 2023-09-25T23:01:03,514 Compiling num-rational v0.4.1 2023-09-25T23:01:04,682 Compiling colorchoice v1.0.0 2023-09-25T23:01:05,084 Compiling anstyle-query v1.0.0 2023-09-25T23:01:05,379 Compiling adler v1.0.2 2023-09-25T23:01:05,902 Compiling typenum v1.16.0 2023-09-25T23:01:06,410 Compiling percent-encoding v2.3.0 2023-09-25T23:01:07,186 Compiling either v1.8.1 2023-09-25T23:01:08,499 Compiling futures-core v0.3.28 2023-09-25T23:01:08,626 Compiling rawpointer v0.2.1 2023-09-25T23:01:08,987 Compiling unicode-bidi v0.3.13 2023-09-25T23:01:09,838 Compiling anstyle v1.0.1 2023-09-25T23:01:14,747 Compiling idna v0.4.0 2023-09-25T23:01:23,386 Compiling anstream v0.3.2 2023-09-25T23:01:26,710 Compiling bio-types v1.0.0 2023-09-25T23:01:27,571 Compiling form_urlencoded v1.2.0 2023-09-25T23:01:29,612 Compiling miniz_oxide v0.7.1 2023-09-25T23:01:37,260 Compiling rand v0.8.5 2023-09-25T23:01:37,499 Compiling wide v0.7.11 2023-09-25T23:01:51,102 Compiling terminal_size v0.2.6 2023-09-25T23:01:51,377 Compiling proc-macro-error v1.0.4 2023-09-25T23:01:51,755 Compiling pin-project-internal v1.1.2 2023-09-25T23:01:52,852 Compiling rand_pcg v0.1.2 2023-09-25T23:01:54,004 Compiling rand_chacha v0.1.1 2023-09-25T23:01:55,198 Compiling approx v0.5.1 2023-09-25T23:01:56,107 Compiling indexmap v1.9.3 2023-09-25T23:01:57,239 Compiling ryu v1.0.15 2023-09-25T23:01:59,730 Compiling feature-probe v0.1.1 2023-09-25T23:02:00,643 Compiling itoa v1.0.9 2023-09-25T23:02:03,373 Compiling anyhow v1.0.72 2023-09-25T23:02:05,227 Compiling rayon-core v1.11.0 2023-09-25T23:02:06,043 Compiling clap_lex v0.5.0 2023-09-25T23:02:06,362 Compiling strsim v0.10.0 2023-09-25T23:02:08,695 Compiling custom_derive v0.1.7 2023-09-25T23:02:08,866 Compiling clap_builder v4.3.17 2023-09-25T23:02:09,037 Compiling pin-project v1.1.2 2023-09-25T23:02:09,642 Compiling bv v0.11.1 2023-09-25T23:02:10,886 Compiling simba v0.6.0 2023-09-25T23:02:15,660 Compiling flate2 v1.0.26 2023-09-25T23:02:22,952 Compiling rand_distr v0.4.3 2023-09-25T23:02:28,383 Compiling crossbeam-deque v0.8.3 2023-09-25T23:02:49,023 Compiling url v2.4.0 2023-09-25T23:03:23,855 Compiling pyo3-ffi v0.19.1 2023-09-25T23:03:25,681 Compiling crossbeam-channel v0.5.8 2023-09-25T23:03:34,024 Compiling spin v0.9.8 2023-09-25T23:03:35,046 Compiling nalgebra-macros v0.1.0 2023-09-25T23:03:35,956 Compiling clap_derive v4.3.12 2023-09-25T23:03:39,783 Compiling rand v0.6.5 2023-09-25T23:03:41,093 Compiling nanorand v0.7.0 2023-09-25T23:03:44,048 Compiling ieee754 v0.2.6 2023-09-25T23:03:45,106 Compiling portable-atomic v1.4.1 2023-09-25T23:03:48,866 Compiling log v0.4.19 2023-09-25T23:03:51,439 Compiling parking_lot_core v0.9.8 2023-09-25T23:03:52,712 Compiling hashbrown v0.12.3 2023-09-25T23:03:59,459 Compiling serde_json v1.0.103 2023-09-25T23:04:00,222 Compiling futures-sink v0.3.28 2023-09-25T23:04:00,512 Compiling linear-map v1.2.0 2023-09-25T23:04:01,345 Compiling flume v0.10.14 2023-09-25T23:04:02,200 Compiling clap v4.3.17 2023-09-25T23:04:05,524 Compiling nalgebra v0.29.0 2023-09-25T23:04:28,621 Compiling itertools v0.10.5 2023-09-25T23:04:30,655 Compiling core_affinity v0.8.0 2023-09-25T23:04:31,429 Compiling rand_isaac v0.1.1 2023-09-25T23:04:34,154 Compiling rand_xorshift v0.1.1 2023-09-25T23:04:34,821 Compiling rand_hc v0.1.0 2023-09-25T23:04:37,875 Compiling enum-map-derive v0.6.0 2023-09-25T23:04:41,339 Compiling rand_os v0.1.3 2023-09-25T23:04:43,716 Compiling rand_jitter v0.1.4 2023-09-25T23:04:45,200 Compiling csv-core v0.1.10 2023-09-25T23:04:45,349 Compiling atty v0.2.14 2023-09-25T23:04:45,619 Compiling tempfile v3.6.0 2023-09-25T23:04:46,788 Compiling humantime v2.1.0 2023-09-25T23:04:49,595 Compiling bit-vec v0.6.3 2023-09-25T23:04:50,302 Compiling fixedbitset v0.4.2 2023-09-25T23:04:51,634 Compiling termcolor v1.2.0 2023-09-25T23:04:53,249 Compiling smallvec v1.11.0 2023-09-25T23:04:55,288 Compiling unicode-width v0.1.10 2023-09-25T23:04:55,636 Compiling bytes v1.4.0 2023-09-25T23:04:57,566 Compiling console v0.15.7 2023-09-25T23:05:07,657 Compiling env_logger v0.9.3 2023-09-25T23:05:15,242 Compiling petgraph v0.6.3 2023-09-25T23:05:29,131 Compiling bit-set v0.5.3 2023-09-25T23:05:30,249 Compiling csv v1.2.2 2023-09-25T23:05:41,070 Compiling enum-map v1.1.1 2023-09-25T23:05:51,695 Compiling statrs v0.16.0 2023-09-25T23:05:53,042 Compiling getset v0.1.2 2023-09-25T23:05:53,953 Compiling rayon v1.7.0 2023-09-25T23:06:25,585 Compiling niffler v2.5.0 2023-09-25T23:06:25,725 Compiling ndarray v0.15.6 2023-09-25T23:06:34,647 Compiling pyo3 v0.19.1 2023-09-25T23:06:36,030 Compiling fxhash v0.2.1 2023-09-25T23:06:40,439 Compiling vec_map v0.8.2 2023-09-25T23:06:42,017 Compiling multimap v0.8.3 2023-09-25T23:06:43,840 Compiling colored v2.0.4 2023-09-25T23:06:45,228 Compiling pyo3-macros-backend v0.19.1 2023-09-25T23:06:49,990 Compiling ordered-float v3.7.0 2023-09-25T23:06:53,573 Compiling itertools-num v0.1.3 2023-09-25T23:06:53,963 Compiling number_prefix v0.4.0 2023-09-25T23:06:54,674 Compiling triple_accel v0.4.0 2023-09-25T23:07:03,949 Compiling fibertools-rs v0.2.5 (/tmp/pip-wheel-vudk3flt/pyft_411c486bebb143f088a9dae404e6a871/local_dependencies/fibertools-rs) 2023-09-25T23:07:05,869 Compiling editdistancek v1.0.2 2023-09-25T23:07:06,894 Compiling fastrand v1.9.0 2023-09-25T23:07:09,612 Compiling roff v0.2.1 2023-09-25T23:07:09,750 Compiling cfg-if v0.1.10 2023-09-25T23:07:09,921 Compiling strum v0.25.0 2023-09-25T23:07:10,306 Compiling bytecount v0.6.3 2023-09-25T23:07:11,106 Compiling bio v1.3.1 2023-09-25T23:07:13,729 Compiling clap_mangen v0.2.12 2023-09-25T23:07:27,054 Compiling gbdt v0.1.1 2023-09-25T23:07:27,270 Compiling pyo3-macros v0.19.1 2023-09-25T23:07:43,408 Compiling indicatif v0.17.5 2023-09-25T23:08:15,804 Compiling parking_lot v0.12.1 2023-09-25T23:08:26,016 Compiling clap_complete v4.3.2 2023-09-25T23:08:27,712 Compiling unindent v0.1.11 2023-09-25T23:08:29,654 Compiling indoc v1.0.9 2023-09-25T23:09:45,102 Compiling libdeflater v0.12.0 2023-09-25T23:09:46,030 Compiling gzp v0.11.3 2023-09-25T23:10:50,660 Compiling rust-htslib v0.43.1 2023-09-25T23:10:52,403 error[E0308]: mismatched types 2023-09-25T23:10:52,404 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.43.1/src/bam/record.rs:154:16 2023-09-25T23:10:52,405 | 2023-09-25T23:10:52,405 154 | l: sam_copy.len() as u64, 2023-09-25T23:10:52,406 | ^^^^^^^^^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-09-25T23:10:52,411 error[E0308]: mismatched types 2023-09-25T23:10:52,412 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.43.1/src/bam/record.rs:155:16 2023-09-25T23:10:52,412 | 2023-09-25T23:10:52,413 155 | m: sam_copy.len() as u64, 2023-09-25T23:10:52,413 | ^^^^^^^^^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-09-25T23:10:52,945 error[E0308]: mismatched types 2023-09-25T23:10:52,946 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.43.1/src/bam/mod.rs:1128:29 2023-09-25T23:10:52,947 | 2023-09-25T23:10:52,948 1128 | (*rec).l_text = l_text as u64; 2023-09-25T23:10:52,948 | ------------- ^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-09-25T23:10:52,949 | | 2023-09-25T23:10:52,950 | expected due to the type of this binding 2023-09-25T23:10:52,990 error[E0308]: mismatched types 2023-09-25T23:10:52,991 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.43.1/src/bam/mod.rs:1393:45 2023-09-25T23:10:52,991 | 2023-09-25T23:10:52,992 1393 | let rec = htslib::sam_hdr_parse((l_text + 1) as u64, text as *const c_char); 2023-09-25T23:10:52,993 | --------------------- ^^^^^^^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-09-25T23:10:52,993 | | 2023-09-25T23:10:52,994 | arguments to this function are incorrect 2023-09-25T23:10:52,995 | 2023-09-25T23:10:52,995 note: function defined here 2023-09-25T23:10:52,996 --> /tmp/pip-wheel-vudk3flt/pyft_411c486bebb143f088a9dae404e6a871/target/release/build/hts-sys-82bf3d2c8804e649/out/bindings.rs:8520:12 2023-09-25T23:10:52,996 | 2023-09-25T23:10:52,997 8520 | pub fn sam_hdr_parse(l_text: size_t, text: *const ::std::os::raw::c_char) -> *mut sam_hdr_t; 2023-09-25T23:10:52,998 | ^^^^^^^^^^^^^ 2023-09-25T23:10:52,998 help: you can convert a `u64` to a `u32` and panic if the converted value doesn't fit 2023-09-25T23:10:52,999 | 2023-09-25T23:10:53,000 1393 | let rec = htslib::sam_hdr_parse(((l_text + 1) as u64).try_into().unwrap(), text as *const c_char); 2023-09-25T23:10:53,000 | + +++++++++++++++++++++ 2023-09-25T23:10:53,002 error[E0308]: mismatched types 2023-09-25T23:10:53,003 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.43.1/src/bam/mod.rs:1395:29 2023-09-25T23:10:53,003 | 2023-09-25T23:10:53,004 1395 | (*rec).l_text = l_text as u64; 2023-09-25T23:10:53,005 | ------------- ^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-09-25T23:10:53,006 | | 2023-09-25T23:10:53,006 | expected due to the type of this binding 2023-09-25T23:10:53,243 error[E0308]: mismatched types 2023-09-25T23:10:53,243 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.43.1/src/bcf/record.rs:1011:48 2023-09-25T23:10:53,244 | 2023-09-25T23:10:53,244 1011 | let rm_set = unsafe { htslib::kbs_init(remove.len() as u64) }; 2023-09-25T23:10:53,245 | ---------------- ^^^^^^^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-09-25T23:10:53,246 | | 2023-09-25T23:10:53,246 | arguments to this function are incorrect 2023-09-25T23:10:53,247 | 2023-09-25T23:10:53,248 note: function defined here 2023-09-25T23:10:53,248 --> /tmp/pip-wheel-vudk3flt/pyft_411c486bebb143f088a9dae404e6a871/target/release/build/hts-sys-82bf3d2c8804e649/out/bindings.rs:11642:12 2023-09-25T23:10:53,249 | 2023-09-25T23:10:53,250 11642 | pub fn kbs_init(ni: size_t) -> *mut kbitset_t; 2023-09-25T23:10:53,250 | ^^^^^^^^ 2023-09-25T23:10:53,251 help: you can convert a `u64` to a `u32` and panic if the converted value doesn't fit 2023-09-25T23:10:53,252 | 2023-09-25T23:10:53,252 1011 | let rm_set = unsafe { htslib::kbs_init((remove.len() as u64).try_into().unwrap()) }; 2023-09-25T23:10:53,253 | + +++++++++++++++++++++ 2023-09-25T23:10:53,473 error[E0308]: mismatched types 2023-09-25T23:10:53,475 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.43.1/src/bgzf/mod.rs:118:17 2023-09-25T23:10:53,476 | 2023-09-25T23:10:53,477 115 | htslib::bgzf_read( 2023-09-25T23:10:53,479 | ----------------- arguments to this function are incorrect 2023-09-25T23:10:53,480 ... 2023-09-25T23:10:53,482 118 | buf.len() as u64, 2023-09-25T23:10:53,483 | ^^^^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-09-25T23:10:53,484 | 2023-09-25T23:10:53,486 note: function defined here 2023-09-25T23:10:53,487 --> /tmp/pip-wheel-vudk3flt/pyft_411c486bebb143f088a9dae404e6a871/target/release/build/hts-sys-82bf3d2c8804e649/out/bindings.rs:10097:12 2023-09-25T23:10:53,488 | 2023-09-25T23:10:53,490 10097 | pub fn bgzf_read(fp: *mut BGZF, data: *mut ::std::os::raw::c_void, length: size_t) -> ssize_t; 2023-09-25T23:10:53,491 | ^^^^^^^^^ 2023-09-25T23:10:53,493 help: you can convert a `u64` to a `u32` and panic if the converted value doesn't fit 2023-09-25T23:10:53,525 | 2023-09-25T23:10:53,526 118 | (buf.len() as u64).try_into().unwrap(), 2023-09-25T23:10:53,527 | + +++++++++++++++++++++ 2023-09-25T23:10:53,528 error[E0308]: mismatched types 2023-09-25T23:10:53,529 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.43.1/src/bgzf/mod.rs:264:17 2023-09-25T23:10:53,529 | 2023-09-25T23:10:53,530 261 | htslib::bgzf_write( 2023-09-25T23:10:53,531 | ------------------ arguments to this function are incorrect 2023-09-25T23:10:53,532 ... 2023-09-25T23:10:53,532 264 | buf.len() as u64, 2023-09-25T23:10:53,533 | ^^^^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-09-25T23:10:53,534 | 2023-09-25T23:10:53,535 note: function defined here 2023-09-25T23:10:53,535 --> /tmp/pip-wheel-vudk3flt/pyft_411c486bebb143f088a9dae404e6a871/target/release/build/hts-sys-82bf3d2c8804e649/out/bindings.rs:10100:12 2023-09-25T23:10:53,536 | 2023-09-25T23:10:53,537 10100 | pub fn bgzf_write( 2023-09-25T23:10:53,538 | ^^^^^^^^^^ 2023-09-25T23:10:53,538 help: you can convert a `u64` to a `u32` and panic if the converted value doesn't fit 2023-09-25T23:10:53,539 | 2023-09-25T23:10:53,540 264 | (buf.len() as u64).try_into().unwrap(), 2023-09-25T23:10:53,540 | + +++++++++++++++++++++ 2023-09-25T23:10:53,682 For more information about this error, try `rustc --explain E0308`. 2023-09-25T23:10:53,696 error: could not compile `rust-htslib` (lib) due to 8 previous errors 2023-09-25T23:10:53,723 💥 maturin failed 2023-09-25T23:10:53,723 Caused by: Failed to build a native library through cargo 2023-09-25T23:10:53,724 Caused by: Cargo build finished with "exit status: 101": `"cargo" "rustc" "--features" "pyo3/extension-module" "--message-format" "json-render-diagnostics" "--manifest-path" "/tmp/pip-wheel-vudk3flt/pyft_411c486bebb143f088a9dae404e6a871/Cargo.toml" "--release" "--lib"` 2023-09-25T23:10:53,724 Error: command ['maturin', 'pep517', 'build-wheel', '-i', '/usr/bin/python3', '--compatibility', 'off'] returned non-zero exit status 1 2023-09-25T23:10:53,747 ERROR: [present-rich] Building wheel for pyft (pyproject.toml) exited with 1 2023-09-25T23:10:53,761 [bold magenta]full command[/]: [blue]/usr/bin/python3 /usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py build_wheel /tmp/tmpkd5nnv5s[/] 2023-09-25T23:10:53,761 [bold magenta]cwd[/]: /tmp/pip-wheel-vudk3flt/pyft_411c486bebb143f088a9dae404e6a871 2023-09-25T23:10:53,762 Building wheel for pyft (pyproject.toml): finished with status 'error' 2023-09-25T23:10:53,765 ERROR: Failed building wheel for pyft 2023-09-25T23:10:53,767 Failed to build pyft 2023-09-25T23:10:53,768 ERROR: Failed to build one or more wheels 2023-09-25T23:10:53,769 Exception information: 2023-09-25T23:10:53,769 Traceback (most recent call last): 2023-09-25T23:10:53,769 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper 2023-09-25T23:10:53,769 status = run_func(*args) 2023-09-25T23:10:53,769 ^^^^^^^^^^^^^^^ 2023-09-25T23:10:53,769 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper 2023-09-25T23:10:53,769 return func(self, options, args) 2023-09-25T23:10:53,769 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-25T23:10:53,769 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 181, in run 2023-09-25T23:10:53,769 raise CommandError("Failed to build one or more wheels") 2023-09-25T23:10:53,769 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2023-09-25T23:10:53,774 Removed build tracker: '/tmp/pip-build-tracker-k2h3s1oe'