2023-09-25T23:18:46,477 Created temporary directory: /tmp/pip-build-tracker-bhxnm14g
2023-09-25T23:18:46,479 Initialized build tracking at /tmp/pip-build-tracker-bhxnm14g
2023-09-25T23:18:46,479 Created build tracker: /tmp/pip-build-tracker-bhxnm14g
2023-09-25T23:18:46,479 Entered build tracker: /tmp/pip-build-tracker-bhxnm14g
2023-09-25T23:18:46,480 Created temporary directory: /tmp/pip-wheel-vk4ae3jl
2023-09-25T23:18:46,483 Created temporary directory: /tmp/pip-ephem-wheel-cache-e_rkcdqd
2023-09-25T23:18:46,505 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-25T23:18:46,508 2 location(s) to search for versions of pyft:
2023-09-25T23:18:46,508 * https://pypi.org/simple/pyft/
2023-09-25T23:18:46,508 * https://www.piwheels.org/simple/pyft/
2023-09-25T23:18:46,509 Fetching project page and analyzing links: https://pypi.org/simple/pyft/
2023-09-25T23:18:46,510 Getting page https://pypi.org/simple/pyft/
2023-09-25T23:18:46,511 Found index url https://pypi.org/simple/
2023-09-25T23:18:46,653 Fetched page https://pypi.org/simple/pyft/ as application/vnd.pypi.simple.v1+json
2023-09-25T23:18:46,658   Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/d7/62/f180b758be35243ef8a74361f533c974f7294541f16c9bc82cdcc29983e0/pyft-0.1.0-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7)
2023-09-25T23:18:46,659   Found link https://files.pythonhosted.org/packages/c5/b3/4729bed033d7a353ec71381fa9e1ade1bf7a186a837ed3627b31265ddede/pyft-0.1.0.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.0
2023-09-25T23:18:46,659   Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/cb/27/9e42da52a20d9b691ef37a8828764cd904af507b9107a386d55614566304/pyft-0.1.1-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7)
2023-09-25T23:18:46,660   Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/42/ec/1bf1615986fee7e2940dcd8902ef14457658d94208b01d95549253b62843/pyft-0.1.2-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7)
2023-09-25T23:18:46,661   Found link https://files.pythonhosted.org/packages/0a/0b/139d65d937bc185b68d3eff484ce5c3ca5e3bfc3150b2020d0b604b64d66/pyft-0.1.2.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.2
2023-09-25T23:18:46,662   Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/04/9b/b53f6e949dabc348f4bf60f9d11a473764e589d6041be074cbcf20a42900/pyft-0.1.3-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7)
2023-09-25T23:18:46,663   Found link https://files.pythonhosted.org/packages/ab/26/5c78ed72341a5f6b18d9f84a1e9bc91739519c613d9051f732bf902f363d/pyft-0.1.3.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.3
2023-09-25T23:18:46,663   Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/5f/76/cfcbbab37550bc51a7e8ea1bc59451ae618fb3eab2f20f7aa097bc615268/pyft-0.1.4-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7)
2023-09-25T23:18:46,664   Found link https://files.pythonhosted.org/packages/c0/f0/c6f569449c4bbc95ba0281b2423d2c22fd957a7279f33b74ebd6aa94fefb/pyft-0.1.4.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.4
2023-09-25T23:18:46,665   Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/b3/d8/e0bcc1d4dda64ccb39a697d7a2cf2f0afc1edddea2f97aa3b7351ada002d/pyft-0.1.5-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7)
2023-09-25T23:18:46,666   Found link https://files.pythonhosted.org/packages/02/93/e6e05f3380af83b5c4b010925934d31dba5527b59d0f256aef8bd6b6b0d1/pyft-0.1.5.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.5
2023-09-25T23:18:46,667   Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/7f/54/78d366d8c40d15e7e6ea673715003e9d3a1799bec389136fd3646cd2ee41/pyft-0.1.6-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7)
2023-09-25T23:18:46,667   Found link https://files.pythonhosted.org/packages/a3/a5/862a667ea22060468fbb9a217ce8d25c4eda9ff6c64b79f5887e7d4123be/pyft-0.1.6.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.6
2023-09-25T23:18:46,668   Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/ba/62/742233e64de296bde6230c31c8ac312c38ca40fa09f10cb36f8c3da3ba1b/pyft-0.1.7-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7)
2023-09-25T23:18:46,669   Found link https://files.pythonhosted.org/packages/26/f9/bfc6b3b66cd901649cf13ea23361c69321e46ed3b1fe73981863371c14ea/pyft-0.1.7.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.7
2023-09-25T23:18:46,670   Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/0b/b9/8bdacd074d2a6f38e3c2c3508cb1ddd1d1c00963e365f44c979bbd8c4df0/pyft-0.1.8-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7)
2023-09-25T23:18:46,671   Found link https://files.pythonhosted.org/packages/ce/e7/c55525cdea4a7421cd6f08f16b85d094a3f95578f8d410ae6849e20ae1aa/pyft-0.1.8.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.8
2023-09-25T23:18:46,671   Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/aa/81/12871893127d02cf1d8ad68c808878816523e038fbd8fc69ef390b2d3069/pyft-0.1.9-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7)
2023-09-25T23:18:46,672   Found link https://files.pythonhosted.org/packages/1e/7e/215d26ce7f6964e59e74252153d7c41d6ffa58f372bc2180bf9365f86a70/pyft-0.1.9.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.9
2023-09-25T23:18:46,673 Fetching project page and analyzing links: https://www.piwheels.org/simple/pyft/
2023-09-25T23:18:46,673 Getting page https://www.piwheels.org/simple/pyft/
2023-09-25T23:18:46,675 Found index url https://www.piwheels.org/simple/
2023-09-25T23:18:46,848 Fetched page https://www.piwheels.org/simple/pyft/ as text/html
2023-09-25T23:18:46,849 Skipping link: not a file: https://www.piwheels.org/simple/pyft/
2023-09-25T23:18:46,850 Skipping link: not a file: https://pypi.org/simple/pyft/
2023-09-25T23:18:46,870 Given no hashes to check 1 links for project 'pyft': discarding no candidates
2023-09-25T23:18:46,888 Collecting pyft==0.1.3
2023-09-25T23:18:46,890   Created temporary directory: /tmp/pip-unpack-07im6qvf
2023-09-25T23:18:47,133   Downloading pyft-0.1.3.tar.gz (8.3 MB)
2023-09-25T23:18:48,705   Added pyft==0.1.3 from https://files.pythonhosted.org/packages/ab/26/5c78ed72341a5f6b18d9f84a1e9bc91739519c613d9051f732bf902f363d/pyft-0.1.3.tar.gz to build tracker '/tmp/pip-build-tracker-bhxnm14g'
2023-09-25T23:18:48,709   Created temporary directory: /tmp/pip-build-env-1u1co60u
2023-09-25T23:18:48,714   Installing build dependencies: started
2023-09-25T23:18:48,715   Running command pip subprocess to install build dependencies
2023-09-25T23:18:49,878   Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2023-09-25T23:18:50,402   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-25T23:18:51,697   Collecting maturin<2.0,>=1.1
2023-09-25T23:18:51,699     Obtaining dependency information for maturin<2.0,>=1.1 from https://files.pythonhosted.org/packages/c1/22/4e716c0dfe799391176605ee4175c9dd1562dd057bb44f0358a365b6d8ce/maturin-1.2.3-py3-none-manylinux_2_17_armv7l.manylinux2014_armv7l.musllinux_1_1_armv7l.whl.metadata
2023-09-25T23:18:51,706     Using cached maturin-1.2.3-py3-none-manylinux_2_17_armv7l.manylinux2014_armv7l.musllinux_1_1_armv7l.whl.metadata (18 kB)
2023-09-25T23:18:51,857   Using cached maturin-1.2.3-py3-none-manylinux_2_17_armv7l.manylinux2014_armv7l.musllinux_1_1_armv7l.whl (9.2 MB)
2023-09-25T23:18:54,448   Installing collected packages: maturin
2023-09-25T23:18:55,166   Successfully installed maturin-1.2.3
2023-09-25T23:18:55,772   Installing build dependencies: finished with status 'done'
2023-09-25T23:18:55,776   Getting requirements to build wheel: started
2023-09-25T23:18:55,777   Running command Getting requirements to build wheel
2023-09-25T23:18:55,987   Getting requirements to build wheel: finished with status 'done'
2023-09-25T23:18:55,991   Created temporary directory: /tmp/pip-modern-metadata-e88fcri1
2023-09-25T23:18:55,994   Preparing metadata (pyproject.toml): started
2023-09-25T23:18:55,995   Running command Preparing metadata (pyproject.toml)
2023-09-25T23:18:56,675       Updating crates.io index
2023-09-25T23:19:01,630    Downloading crates ...
2023-09-25T23:19:06,375     Downloaded anstyle v1.0.1
2023-09-25T23:19:06,417     Downloaded rust-htslib v0.44.1
2023-09-25T23:19:06,493     Downloaded hts-sys v2.1.1
2023-09-25T23:19:08,445     Downloaded openssl-src v111.26.0+1.1.1u
2023-09-25T23:19:12,471     Downloaded libz-sys v1.1.9
2023-09-25T23:19:13,322     Downloaded gzp v0.11.3
2023-09-25T23:19:13,569     Downloaded curl-sys v0.4.63+curl-8.1.2
2023-09-25T23:19:19,954     Downloaded bio v1.3.1
2023-09-25T23:19:20,124     Downloaded anyhow v1.0.72
2023-09-25T23:19:20,188     Downloaded wide v0.7.11
2023-09-25T23:19:20,284     Downloaded vec_map v0.8.2
2023-09-25T23:19:20,299     Downloaded triple_accel v0.4.0
2023-09-25T23:19:20,333     Downloaded terminal_size v0.2.6
2023-09-25T23:19:20,354     Downloaded strum v0.25.0
2023-09-25T23:19:20,364     Downloaded serde_derive v1.0.172
2023-09-25T23:19:20,445     Downloaded serde v1.0.172
2023-09-25T23:19:20,577     Downloaded semver v0.1.20
2023-09-25T23:19:20,594     Downloaded safe_arch v0.7.1
2023-09-25T23:19:20,754     Downloaded rustversion v1.0.14
2023-09-25T23:19:20,799     Downloaded rustix v0.38.4
2023-09-25T23:19:21,684     Downloaded rustc_version v0.1.7
2023-09-25T23:19:21,701     Downloaded roff v0.2.1
2023-09-25T23:19:21,720     Downloaded rdrand v0.4.0
2023-09-25T23:19:21,746     Downloaded rand_xorshift v0.1.1
2023-09-25T23:19:21,770     Downloaded rand_pcg v0.1.2
2023-09-25T23:19:21,799     Downloaded rand_os v0.1.3
2023-09-25T23:19:21,837     Downloaded rand_jitter v0.1.4
2023-09-25T23:19:21,860     Downloaded rand_isaac v0.1.1
2023-09-25T23:19:21,878     Downloaded rand_hc v0.1.0
2023-09-25T23:19:21,894     Downloaded rand_core v0.4.2
2023-09-25T23:19:21,914     Downloaded rand_core v0.3.1
2023-09-25T23:19:21,935     Downloaded rand_chacha v0.1.1
2023-09-25T23:19:21,952     Downloaded rand v0.6.5
2023-09-25T23:19:22,034     Downloaded portable-atomic v1.4.1
2023-09-25T23:19:22,133     Downloaded pin-project-internal v1.1.2
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2023-09-25T23:19:22,393     Downloaded ordered-float v3.7.0
2023-09-25T23:19:22,413     Downloaded niffler v2.5.0
2023-09-25T23:19:22,457     Downloaded newtype_derive v0.1.6
2023-09-25T23:19:22,475     Downloaded lzma-sys v0.1.20
2023-09-25T23:19:23,098     Downloaded linux-raw-sys v0.4.3
2023-09-25T23:19:23,467     Downloaded linear-map v1.2.0
2023-09-25T23:19:23,493     Downloaded libdeflater v0.12.0
2023-09-25T23:19:23,530     Downloaded libdeflate-sys v0.12.0
2023-09-25T23:19:23,709     Downloaded itertools-num v0.1.3
2023-09-25T23:19:23,727     Downloaded is-terminal v0.4.9
2023-09-25T23:19:23,741     Downloaded indicatif v0.17.5
2023-09-25T23:19:23,802     Downloaded ieee754 v0.2.6
2023-09-25T23:19:23,829     Downloaded gbdt v0.1.1
2023-09-25T23:19:23,865     Downloaded fuchsia-cprng v0.1.1
2023-09-25T23:19:23,876     Downloaded fs-utils v1.1.4
2023-09-25T23:19:23,888     Downloaded feature-probe v0.1.1
2023-09-25T23:19:23,904     Downloaded env_logger v0.9.3
2023-09-25T23:19:23,943     Downloaded enum-map-derive v0.6.0
2023-09-25T23:19:23,952     Downloaded enum-map v1.1.1
2023-09-25T23:19:23,972     Downloaded editdistancek v1.0.2
2023-09-25T23:19:23,988     Downloaded derive-new v0.5.9
2023-09-25T23:19:24,003     Downloaded custom_derive v0.1.7
2023-09-25T23:19:24,021     Downloaded core_affinity v0.8.0
2023-09-25T23:19:24,036     Downloaded colored v2.0.4
2023-09-25T23:19:24,071     Downloaded cmake v0.1.50
2023-09-25T23:19:24,088     Downloaded cloudabi v0.0.3
2023-09-25T23:19:24,100     Downloaded clap_mangen v0.2.12
2023-09-25T23:19:24,119     Downloaded clap_complete v4.3.2
2023-09-25T23:19:24,157     Downloaded clap_builder v4.3.17
2023-09-25T23:19:24,265     Downloaded clap v4.3.17
2023-09-25T23:19:24,426     Downloaded cfg-if v0.1.10
2023-09-25T23:19:24,446     Downloaded bv v0.11.1
2023-09-25T23:19:24,517     Downloaded bitflags v2.3.3
2023-09-25T23:19:24,564     Downloaded bio-types v1.0.0
2023-09-25T23:19:24,593     Downloaded autocfg v0.1.8
2023-09-25T23:19:24,606     Downloaded anstyle-parse v0.2.1
2023-09-25T23:19:24,730   🔗 Found pyo3 bindings
2023-09-25T23:19:25,002   🐍 Found CPython 3.11 at /usr/bin/python3
2023-09-25T23:19:25,002   📡 Using build options features from pyproject.toml
2023-09-25T23:19:25,013   pyft-0.1.3.dist-info
2023-09-25T23:19:25,013   Checking for Rust toolchain....
2023-09-25T23:19:25,014   Running `maturin pep517 write-dist-info --metadata-directory /tmp/pip-modern-metadata-e88fcri1 --interpreter /usr/bin/python3`
2023-09-25T23:19:25,036   Preparing metadata (pyproject.toml): finished with status 'done'
2023-09-25T23:19:25,041   Source in /tmp/pip-wheel-vk4ae3jl/pyft_b54a59961a8b423bafb3d476db315fc1 has version 0.1.3, which satisfies requirement pyft==0.1.3 from https://files.pythonhosted.org/packages/ab/26/5c78ed72341a5f6b18d9f84a1e9bc91739519c613d9051f732bf902f363d/pyft-0.1.3.tar.gz
2023-09-25T23:19:25,042   Removed pyft==0.1.3 from https://files.pythonhosted.org/packages/ab/26/5c78ed72341a5f6b18d9f84a1e9bc91739519c613d9051f732bf902f363d/pyft-0.1.3.tar.gz from build tracker '/tmp/pip-build-tracker-bhxnm14g'
2023-09-25T23:19:25,047 Created temporary directory: /tmp/pip-unpack-jrja56z1
2023-09-25T23:19:25,048 Created temporary directory: /tmp/pip-unpack-k3474k1a
2023-09-25T23:19:25,050 Building wheels for collected packages: pyft
2023-09-25T23:19:25,054   Created temporary directory: /tmp/pip-wheel-1tld8fs6
2023-09-25T23:19:25,055   Destination directory: /tmp/pip-wheel-1tld8fs6
2023-09-25T23:19:25,057   Building wheel for pyft (pyproject.toml): started
2023-09-25T23:19:25,058   Running command Building wheel for pyft (pyproject.toml)
2023-09-25T23:19:25,223   Running `maturin pep517 build-wheel -i /usr/bin/python3 --compatibility off`
2023-09-25T23:19:26,207   🔗 Found pyo3 bindings
2023-09-25T23:19:26,480   🐍 Found CPython 3.11 at /usr/bin/python3
2023-09-25T23:19:26,482   📡 Using build options features from pyproject.toml
2023-09-25T23:19:27,765      Compiling autocfg v1.1.0
2023-09-25T23:19:27,766      Compiling libc v0.2.147
2023-09-25T23:19:27,766      Compiling proc-macro2 v1.0.66
2023-09-25T23:19:27,767      Compiling unicode-ident v1.0.11
2023-09-25T23:19:31,203      Compiling cfg-if v1.0.0
2023-09-25T23:19:31,370      Compiling pkg-config v0.3.27
2023-09-25T23:19:36,339      Compiling quote v1.0.31
2023-09-25T23:19:38,910      Compiling syn v2.0.26
2023-09-25T23:19:39,424      Compiling syn v1.0.109
2023-09-25T23:19:40,694      Compiling jobserver v0.1.26
2023-09-25T23:19:43,777      Compiling cc v1.0.79
2023-09-25T23:19:54,797      Compiling memchr v2.5.0
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2023-09-25T23:20:13,054      Compiling libz-sys v1.1.9
2023-09-25T23:20:15,560      Compiling scopeguard v1.2.0
2023-09-25T23:20:26,056      Compiling getrandom v0.2.10
2023-09-25T23:20:27,847      Compiling rustix v0.38.4
2023-09-25T23:20:30,979      Compiling aho-corasick v1.0.2
2023-09-25T23:20:31,760      Compiling openssl-src v111.26.0+1.1.1u
2023-09-25T23:20:33,746      Compiling autocfg v0.1.8
2023-09-25T23:20:34,010      Compiling regex-syntax v0.7.4
2023-09-25T23:20:44,531      Compiling bitflags v2.3.3
2023-09-25T23:20:46,693      Compiling target-lexicon v0.12.10
2023-09-25T23:20:50,695      Compiling heck v0.4.1
2023-09-25T23:20:52,232      Compiling linux-raw-sys v0.4.3
2023-09-25T23:20:59,902      Compiling rand_core v0.4.2
2023-09-25T23:21:01,595      Compiling regex-automata v0.3.3
2023-09-25T23:21:10,033      Compiling openssl-sys v0.9.90
2023-09-25T23:21:13,989      Compiling lazy_static v1.4.0
2023-09-25T23:21:14,254      Compiling thiserror v1.0.43
2023-09-25T23:21:15,225      Compiling serde v1.0.172
2023-09-25T23:21:16,107      Compiling io-lifetimes v1.0.11
2023-09-25T23:21:21,576      Compiling is-terminal v0.4.9
2023-09-25T23:21:22,253      Compiling serde_derive v1.0.172
2023-09-25T23:21:58,339      Compiling regex v1.9.1
2023-09-25T23:22:03,607      Compiling thiserror-impl v1.0.43
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2023-09-25T23:30:18,206      Compiling cfg-if v0.1.10
2023-09-25T23:30:18,381      Compiling roff v0.2.1
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2023-09-25T23:30:23,935      Compiling bytecount v0.6.3
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2023-09-25T23:30:37,475      Compiling bio v1.3.1
2023-09-25T23:30:37,676      Compiling gbdt v0.1.1
2023-09-25T23:30:41,411      Compiling pyo3-macros v0.19.1
2023-09-25T23:30:46,517      Compiling indicatif v0.17.5
2023-09-25T23:31:31,792      Compiling parking_lot v0.12.1
2023-09-25T23:31:44,778      Compiling clap_complete v4.3.2
2023-09-25T23:31:45,378      Compiling unindent v0.1.11
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2023-09-25T23:33:08,425      Compiling libdeflater v0.12.0
2023-09-25T23:33:09,437      Compiling gzp v0.11.3
2023-09-25T23:34:03,045      Compiling rust-htslib v0.44.1
2023-09-25T23:34:04,828   error[E0308]: mismatched types
2023-09-25T23:34:04,829      --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bam/record.rs:154:16
2023-09-25T23:34:04,830       |
2023-09-25T23:34:04,830   154 |             l: sam_copy.len() as u64,
2023-09-25T23:34:04,831       |                ^^^^^^^^^^^^^^^^^^^^^ expected `u32`, found `u64`

2023-09-25T23:34:04,836   error[E0308]: mismatched types
2023-09-25T23:34:04,837      --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bam/record.rs:155:16
2023-09-25T23:34:04,838       |
2023-09-25T23:34:04,838   155 |             m: sam_copy.len() as u64,
2023-09-25T23:34:04,839       |                ^^^^^^^^^^^^^^^^^^^^^ expected `u32`, found `u64`

2023-09-25T23:34:05,234   error[E0308]: mismatched types
2023-09-25T23:34:05,235       --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bam/record.rs:2324:17
2023-09-25T23:34:05,235        |
2023-09-25T23:34:05,236   2319 |             let ret = hts_sys::bam_mods_query_type(
2023-09-25T23:34:05,237        |                       ---------------------------- arguments to this function are incorrect
2023-09-25T23:34:05,238   ...
2023-09-25T23:34:05,238   2324 |                 &mut canonical,
2023-09-25T23:34:05,239        |                 ^^^^^^^^^^^^^^ expected `*mut u8`, found `&mut i8`
2023-09-25T23:34:05,240        |
2023-09-25T23:34:05,240        = note:    expected raw pointer `*mut u8`
2023-09-25T23:34:05,241                found mutable reference `&mut i8`
2023-09-25T23:34:05,242   note: function defined here
2023-09-25T23:34:05,242       --> /tmp/pip-wheel-vk4ae3jl/pyft_b54a59961a8b423bafb3d476db315fc1/target/release/build/hts-sys-82bf3d2c8804e649/out/bindings.rs:9439:12
2023-09-25T23:34:05,243        |
2023-09-25T23:34:05,244   9439 |     pub fn bam_mods_query_type(
2023-09-25T23:34:05,245        |            ^^^^^^^^^^^^^^^^^^^

2023-09-25T23:34:05,413   error[E0308]: mismatched types
2023-09-25T23:34:05,414       --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bam/mod.rs:1128:29
2023-09-25T23:34:05,415        |
2023-09-25T23:34:05,416   1128 |             (*rec).l_text = l_text as u64;
2023-09-25T23:34:05,417        |             -------------   ^^^^^^^^^^^^^ expected `u32`, found `u64`
2023-09-25T23:34:05,417        |             |
2023-09-25T23:34:05,418        |             expected due to the type of this binding

2023-09-25T23:34:05,455   error[E0308]: mismatched types
2023-09-25T23:34:05,456       --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bam/mod.rs:1393:45
2023-09-25T23:34:05,456        |
2023-09-25T23:34:05,457   1393 |             let rec = htslib::sam_hdr_parse((l_text + 1) as u64, text as *const c_char);
2023-09-25T23:34:05,457        |                       --------------------- ^^^^^^^^^^^^^^^^^^^ expected `u32`, found `u64`
2023-09-25T23:34:05,458        |                       |
2023-09-25T23:34:05,458        |                       arguments to this function are incorrect
2023-09-25T23:34:05,459        |
2023-09-25T23:34:05,459   note: function defined here
2023-09-25T23:34:05,460       --> /tmp/pip-wheel-vk4ae3jl/pyft_b54a59961a8b423bafb3d476db315fc1/target/release/build/hts-sys-82bf3d2c8804e649/out/bindings.rs:8520:12
2023-09-25T23:34:05,460        |
2023-09-25T23:34:05,461   8520 |     pub fn sam_hdr_parse(l_text: size_t, text: *const ::std::os::raw::c_char) -> *mut sam_hdr_t;
2023-09-25T23:34:05,461        |            ^^^^^^^^^^^^^
2023-09-25T23:34:05,462   help: you can convert a `u64` to a `u32` and panic if the converted value doesn't fit
2023-09-25T23:34:05,462        |
2023-09-25T23:34:05,463   1393 |             let rec = htslib::sam_hdr_parse(((l_text + 1) as u64).try_into().unwrap(), text as *const c_char);
2023-09-25T23:34:05,464        |                                             +                   +++++++++++++++++++++

2023-09-25T23:34:05,465   error[E0308]: mismatched types
2023-09-25T23:34:05,466       --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bam/mod.rs:1395:29
2023-09-25T23:34:05,467        |
2023-09-25T23:34:05,467   1395 |             (*rec).l_text = l_text as u64;
2023-09-25T23:34:05,468        |             -------------   ^^^^^^^^^^^^^ expected `u32`, found `u64`
2023-09-25T23:34:05,469        |             |
2023-09-25T23:34:05,470        |             expected due to the type of this binding

2023-09-25T23:34:05,708   error[E0308]: mismatched types
2023-09-25T23:34:05,709        --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bcf/record.rs:1011:48
2023-09-25T23:34:05,710         |
2023-09-25T23:34:05,710   1011  |         let rm_set = unsafe { htslib::kbs_init(remove.len() as u64) };
2023-09-25T23:34:05,711         |                               ---------------- ^^^^^^^^^^^^^^^^^^^ expected `u32`, found `u64`
2023-09-25T23:34:05,712         |                               |
2023-09-25T23:34:05,713         |                               arguments to this function are incorrect
2023-09-25T23:34:05,714         |
2023-09-25T23:34:05,714   note: function defined here
2023-09-25T23:34:05,715        --> /tmp/pip-wheel-vk4ae3jl/pyft_b54a59961a8b423bafb3d476db315fc1/target/release/build/hts-sys-82bf3d2c8804e649/out/bindings.rs:11642:12
2023-09-25T23:34:05,716         |
2023-09-25T23:34:05,716   11642 |     pub fn kbs_init(ni: size_t) -> *mut kbitset_t;
2023-09-25T23:34:05,717         |            ^^^^^^^^
2023-09-25T23:34:05,718   help: you can convert a `u64` to a `u32` and panic if the converted value doesn't fit
2023-09-25T23:34:05,718         |
2023-09-25T23:34:05,719   1011  |         let rm_set = unsafe { htslib::kbs_init((remove.len() as u64).try_into().unwrap()) };
2023-09-25T23:34:05,720         |                                                +                   +++++++++++++++++++++

2023-09-25T23:34:05,941   error[E0308]: mismatched types
2023-09-25T23:34:05,942        --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bgzf/mod.rs:118:17
2023-09-25T23:34:05,943         |
2023-09-25T23:34:05,944   115   |             htslib::bgzf_read(
2023-09-25T23:34:05,945         |             ----------------- arguments to this function are incorrect
2023-09-25T23:34:05,945   ...
2023-09-25T23:34:05,946   118   |                 buf.len() as u64,
2023-09-25T23:34:05,947         |                 ^^^^^^^^^^^^^^^^ expected `u32`, found `u64`
2023-09-25T23:34:05,947         |
2023-09-25T23:34:05,948   note: function defined here
2023-09-25T23:34:05,948        --> /tmp/pip-wheel-vk4ae3jl/pyft_b54a59961a8b423bafb3d476db315fc1/target/release/build/hts-sys-82bf3d2c8804e649/out/bindings.rs:10097:12
2023-09-25T23:34:05,949         |
2023-09-25T23:34:05,949   10097 |     pub fn bgzf_read(fp: *mut BGZF, data: *mut ::std::os::raw::c_void, length: size_t) -> ssize_t;
2023-09-25T23:34:05,950         |            ^^^^^^^^^
2023-09-25T23:34:05,950   help: you can convert a `u64` to a `u32` and panic if the converted value doesn't fit
2023-09-25T23:34:05,951         |
2023-09-25T23:34:05,952   118   |                 (buf.len() as u64).try_into().unwrap(),
2023-09-25T23:34:05,952         |                 +                +++++++++++++++++++++

2023-09-25T23:34:05,972   error[E0308]: mismatched types
2023-09-25T23:34:05,973        --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bgzf/mod.rs:264:17
2023-09-25T23:34:05,973         |
2023-09-25T23:34:05,974   261   |             htslib::bgzf_write(
2023-09-25T23:34:05,975         |             ------------------ arguments to this function are incorrect
2023-09-25T23:34:05,975   ...
2023-09-25T23:34:05,976   264   |                 buf.len() as u64,
2023-09-25T23:34:05,976         |                 ^^^^^^^^^^^^^^^^ expected `u32`, found `u64`
2023-09-25T23:34:05,977         |
2023-09-25T23:34:05,978   note: function defined here
2023-09-25T23:34:05,979        --> /tmp/pip-wheel-vk4ae3jl/pyft_b54a59961a8b423bafb3d476db315fc1/target/release/build/hts-sys-82bf3d2c8804e649/out/bindings.rs:10100:12
2023-09-25T23:34:05,979         |
2023-09-25T23:34:05,980   10100 |     pub fn bgzf_write(
2023-09-25T23:34:05,981         |            ^^^^^^^^^^
2023-09-25T23:34:05,982   help: you can convert a `u64` to a `u32` and panic if the converted value doesn't fit
2023-09-25T23:34:05,982         |
2023-09-25T23:34:05,983   264   |                 (buf.len() as u64).try_into().unwrap(),
2023-09-25T23:34:05,984         |                 +                +++++++++++++++++++++

2023-09-25T23:34:06,152   For more information about this error, try `rustc --explain E0308`.
2023-09-25T23:34:06,168   error: could not compile `rust-htslib` (lib) due to 9 previous errors
2023-09-25T23:34:06,194   💥 maturin failed
2023-09-25T23:34:06,195     Caused by: Failed to build a native library through cargo
2023-09-25T23:34:06,195     Caused by: Cargo build finished with "exit status: 101": `"cargo" "rustc" "--features" "pyo3/extension-module" "--message-format" "json-render-diagnostics" "--manifest-path" "/tmp/pip-wheel-vk4ae3jl/pyft_b54a59961a8b423bafb3d476db315fc1/Cargo.toml" "--release" "--lib"`
2023-09-25T23:34:06,199   Error: command ['maturin', 'pep517', 'build-wheel', '-i', '/usr/bin/python3', '--compatibility', 'off'] returned non-zero exit status 1
2023-09-25T23:34:06,219   ERROR: [present-rich] Building wheel for pyft (pyproject.toml) exited with 1
2023-09-25T23:34:06,232   [bold magenta]full command[/]: [blue]/usr/bin/python3 /usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py build_wheel /tmp/tmpugvtyief[/]
2023-09-25T23:34:06,233   [bold magenta]cwd[/]: /tmp/pip-wheel-vk4ae3jl/pyft_b54a59961a8b423bafb3d476db315fc1
2023-09-25T23:34:06,234   Building wheel for pyft (pyproject.toml): finished with status 'error'
2023-09-25T23:34:06,236   ERROR: Failed building wheel for pyft
2023-09-25T23:34:06,239 Failed to build pyft
2023-09-25T23:34:06,240 ERROR: Failed to build one or more wheels
2023-09-25T23:34:06,241 Exception information:
2023-09-25T23:34:06,241 Traceback (most recent call last):
2023-09-25T23:34:06,241   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper
2023-09-25T23:34:06,241     status = run_func(*args)
2023-09-25T23:34:06,241              ^^^^^^^^^^^^^^^
2023-09-25T23:34:06,241   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper
2023-09-25T23:34:06,241     return func(self, options, args)
2023-09-25T23:34:06,241            ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-25T23:34:06,241   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 181, in run
2023-09-25T23:34:06,241     raise CommandError("Failed to build one or more wheels")
2023-09-25T23:34:06,241 pip._internal.exceptions.CommandError: Failed to build one or more wheels
2023-09-25T23:34:06,246 Removed build tracker: '/tmp/pip-build-tracker-bhxnm14g'