2023-09-26T00:27:11,004 Created temporary directory: /tmp/pip-build-tracker-nmvl6zhl 2023-09-26T00:27:11,006 Initialized build tracking at /tmp/pip-build-tracker-nmvl6zhl 2023-09-26T00:27:11,006 Created build tracker: /tmp/pip-build-tracker-nmvl6zhl 2023-09-26T00:27:11,007 Entered build tracker: /tmp/pip-build-tracker-nmvl6zhl 2023-09-26T00:27:11,008 Created temporary directory: /tmp/pip-wheel-a17hmpql 2023-09-26T00:27:11,011 Created temporary directory: /tmp/pip-ephem-wheel-cache-emxjz3ai 2023-09-26T00:27:11,033 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-26T00:27:11,037 2 location(s) to search for versions of pyft: 2023-09-26T00:27:11,037 * https://pypi.org/simple/pyft/ 2023-09-26T00:27:11,037 * https://www.piwheels.org/simple/pyft/ 2023-09-26T00:27:11,038 Fetching project page and analyzing links: https://pypi.org/simple/pyft/ 2023-09-26T00:27:11,039 Getting page https://pypi.org/simple/pyft/ 2023-09-26T00:27:11,040 Found index url https://pypi.org/simple/ 2023-09-26T00:27:11,179 Fetched page https://pypi.org/simple/pyft/ as application/vnd.pypi.simple.v1+json 2023-09-26T00:27:11,184 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/d7/62/f180b758be35243ef8a74361f533c974f7294541f16c9bc82cdcc29983e0/pyft-0.1.0-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-09-26T00:27:11,185 Found link https://files.pythonhosted.org/packages/c5/b3/4729bed033d7a353ec71381fa9e1ade1bf7a186a837ed3627b31265ddede/pyft-0.1.0.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.0 2023-09-26T00:27:11,185 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/cb/27/9e42da52a20d9b691ef37a8828764cd904af507b9107a386d55614566304/pyft-0.1.1-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-09-26T00:27:11,186 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/42/ec/1bf1615986fee7e2940dcd8902ef14457658d94208b01d95549253b62843/pyft-0.1.2-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-09-26T00:27:11,187 Found link https://files.pythonhosted.org/packages/0a/0b/139d65d937bc185b68d3eff484ce5c3ca5e3bfc3150b2020d0b604b64d66/pyft-0.1.2.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.2 2023-09-26T00:27:11,187 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/04/9b/b53f6e949dabc348f4bf60f9d11a473764e589d6041be074cbcf20a42900/pyft-0.1.3-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-09-26T00:27:11,188 Found link https://files.pythonhosted.org/packages/ab/26/5c78ed72341a5f6b18d9f84a1e9bc91739519c613d9051f732bf902f363d/pyft-0.1.3.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.3 2023-09-26T00:27:11,189 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/5f/76/cfcbbab37550bc51a7e8ea1bc59451ae618fb3eab2f20f7aa097bc615268/pyft-0.1.4-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-09-26T00:27:11,190 Found link https://files.pythonhosted.org/packages/c0/f0/c6f569449c4bbc95ba0281b2423d2c22fd957a7279f33b74ebd6aa94fefb/pyft-0.1.4.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.4 2023-09-26T00:27:11,191 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/b3/d8/e0bcc1d4dda64ccb39a697d7a2cf2f0afc1edddea2f97aa3b7351ada002d/pyft-0.1.5-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-09-26T00:27:11,192 Found link https://files.pythonhosted.org/packages/02/93/e6e05f3380af83b5c4b010925934d31dba5527b59d0f256aef8bd6b6b0d1/pyft-0.1.5.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.5 2023-09-26T00:27:11,193 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/7f/54/78d366d8c40d15e7e6ea673715003e9d3a1799bec389136fd3646cd2ee41/pyft-0.1.6-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-09-26T00:27:11,193 Found link https://files.pythonhosted.org/packages/a3/a5/862a667ea22060468fbb9a217ce8d25c4eda9ff6c64b79f5887e7d4123be/pyft-0.1.6.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.6 2023-09-26T00:27:11,194 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/ba/62/742233e64de296bde6230c31c8ac312c38ca40fa09f10cb36f8c3da3ba1b/pyft-0.1.7-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-09-26T00:27:11,195 Found link https://files.pythonhosted.org/packages/26/f9/bfc6b3b66cd901649cf13ea23361c69321e46ed3b1fe73981863371c14ea/pyft-0.1.7.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.7 2023-09-26T00:27:11,196 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/0b/b9/8bdacd074d2a6f38e3c2c3508cb1ddd1d1c00963e365f44c979bbd8c4df0/pyft-0.1.8-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-09-26T00:27:11,196 Found link https://files.pythonhosted.org/packages/ce/e7/c55525cdea4a7421cd6f08f16b85d094a3f95578f8d410ae6849e20ae1aa/pyft-0.1.8.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.8 2023-09-26T00:27:11,197 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/aa/81/12871893127d02cf1d8ad68c808878816523e038fbd8fc69ef390b2d3069/pyft-0.1.9-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-09-26T00:27:11,198 Found link https://files.pythonhosted.org/packages/1e/7e/215d26ce7f6964e59e74252153d7c41d6ffa58f372bc2180bf9365f86a70/pyft-0.1.9.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.9 2023-09-26T00:27:11,199 Fetching project page and analyzing links: https://www.piwheels.org/simple/pyft/ 2023-09-26T00:27:11,199 Getting page https://www.piwheels.org/simple/pyft/ 2023-09-26T00:27:11,201 Found index url https://www.piwheels.org/simple/ 2023-09-26T00:27:11,357 Fetched page https://www.piwheels.org/simple/pyft/ as text/html 2023-09-26T00:27:11,358 Skipping link: not a file: https://www.piwheels.org/simple/pyft/ 2023-09-26T00:27:11,359 Skipping link: not a file: https://pypi.org/simple/pyft/ 2023-09-26T00:27:11,378 Given no hashes to check 1 links for project 'pyft': discarding no candidates 2023-09-26T00:27:11,396 Collecting pyft==0.1.5 2023-09-26T00:27:11,399 Created temporary directory: /tmp/pip-unpack-am5pn2ce 2023-09-26T00:27:11,623 Downloading pyft-0.1.5.tar.gz (8.3 MB) 2023-09-26T00:27:13,530 Added pyft==0.1.5 from https://files.pythonhosted.org/packages/02/93/e6e05f3380af83b5c4b010925934d31dba5527b59d0f256aef8bd6b6b0d1/pyft-0.1.5.tar.gz to build tracker '/tmp/pip-build-tracker-nmvl6zhl' 2023-09-26T00:27:13,534 Created temporary directory: /tmp/pip-build-env-2i_gy108 2023-09-26T00:27:13,539 Installing build dependencies: started 2023-09-26T00:27:13,541 Running command pip subprocess to install build dependencies 2023-09-26T00:27:14,696 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-09-26T00:27:15,209 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-26T00:27:16,498 Collecting maturin<2.0,>=1.1 2023-09-26T00:27:16,499 Obtaining dependency information for maturin<2.0,>=1.1 from https://files.pythonhosted.org/packages/c1/22/4e716c0dfe799391176605ee4175c9dd1562dd057bb44f0358a365b6d8ce/maturin-1.2.3-py3-none-manylinux_2_17_armv7l.manylinux2014_armv7l.musllinux_1_1_armv7l.whl.metadata 2023-09-26T00:27:16,506 Using cached maturin-1.2.3-py3-none-manylinux_2_17_armv7l.manylinux2014_armv7l.musllinux_1_1_armv7l.whl.metadata (18 kB) 2023-09-26T00:27:16,658 Using cached maturin-1.2.3-py3-none-manylinux_2_17_armv7l.manylinux2014_armv7l.musllinux_1_1_armv7l.whl (9.2 MB) 2023-09-26T00:27:19,167 Installing collected packages: maturin 2023-09-26T00:27:19,882 Successfully installed maturin-1.2.3 2023-09-26T00:27:20,465 Installing build dependencies: finished with status 'done' 2023-09-26T00:27:20,468 Getting requirements to build wheel: started 2023-09-26T00:27:20,469 Running command Getting requirements to build wheel 2023-09-26T00:27:20,663 Getting requirements to build wheel: finished with status 'done' 2023-09-26T00:27:20,666 Created temporary directory: /tmp/pip-modern-metadata-pc9lcmn5 2023-09-26T00:27:20,668 Preparing metadata (pyproject.toml): started 2023-09-26T00:27:20,670 Running command Preparing metadata (pyproject.toml) 2023-09-26T00:27:21,321 Updating crates.io index 2023-09-26T00:27:24,574 Downloading crates ... 2023-09-26T00:27:26,094 Downloaded encode_unicode v0.3.6 2023-09-26T00:27:26,199 Downloaded gzp v0.11.3 2023-09-26T00:27:26,487 Downloaded wide v0.7.11 2023-09-26T00:27:26,566 Downloaded openssl-src v111.26.0+1.1.1u 2023-09-26T00:27:29,848 Downloaded vec_map v0.8.2 2023-09-26T00:27:29,863 Downloaded triple_accel v0.4.0 2023-09-26T00:27:29,897 Downloaded statrs v0.16.0 2023-09-26T00:27:30,009 Downloaded serde v1.0.172 2023-09-26T00:27:30,058 Downloaded ryu v1.0.15 2023-09-26T00:27:30,125 Downloaded rustc_version v0.1.7 2023-09-26T00:27:30,140 Downloaded rust-htslib v0.44.1 2023-09-26T00:27:30,216 Downloaded ordered-float v3.7.0 2023-09-26T00:27:30,237 Downloaded newtype_derive v0.1.6 2023-09-26T00:27:30,255 Downloaded linux-raw-sys v0.4.3 2023-09-26T00:27:30,635 Downloaded linear-map v1.2.0 2023-09-26T00:27:30,658 Downloaded is-terminal v0.4.9 2023-09-26T00:27:30,672 Downloaded hts-sys v2.1.1 2023-09-26T00:27:32,012 Downloaded bv v0.11.1 2023-09-26T00:27:32,069 Downloaded curl-sys v0.4.63+curl-8.1.2 2023-09-26T00:27:36,892 Downloaded libz-sys v1.1.9 2023-09-26T00:27:37,698 Downloaded derive-new v0.5.9 2023-09-26T00:27:37,713 Downloaded core_affinity v0.8.0 2023-09-26T00:27:37,728 Downloaded bytemuck v1.13.1 2023-09-26T00:27:37,776 Downloaded bytecount v0.6.3 2023-09-26T00:27:37,803 Downloaded env_logger v0.9.3 2023-09-26T00:27:37,841 Downloaded spin v0.9.8 2023-09-26T00:27:37,880 Downloaded simba v0.6.0 2023-09-26T00:27:37,926 Downloaded serde_derive v1.0.172 2023-09-26T00:27:38,910 Downloaded semver v0.1.20 2023-09-26T00:27:38,939 Downloaded safe_arch v0.7.1 2023-09-26T00:27:39,043 Downloaded rustversion v1.0.14 2023-09-26T00:27:39,091 Downloaded rustix v0.38.4 2023-09-26T00:27:39,524 Downloaded rustix v0.37.23 2023-09-26T00:27:39,972 Downloaded regex-syntax v0.7.4 2023-09-26T00:27:40,108 Downloaded regex-automata v0.3.3 2023-09-26T00:27:40,414 Downloaded rand_distr v0.4.3 2023-09-26T00:27:40,469 Downloaded quick-error v1.2.3 2023-09-26T00:27:40,490 Downloaded portable-atomic v1.4.1 2023-09-26T00:27:40,582 Downloaded pin-project-internal v1.1.2 2023-09-26T00:27:40,604 Downloaded pin-project v1.1.2 2023-09-26T00:27:40,847 Downloaded paste v1.0.14 2023-09-26T00:27:40,902 Downloaded openssl-sys v0.9.90 2023-09-26T00:27:41,002 Downloaded number_prefix v0.4.0 2023-09-26T00:27:41,022 Downloaded niffler v2.5.0 2023-09-26T00:27:41,079 Downloaded nanorand v0.7.0 2023-09-26T00:27:41,122 Downloaded nalgebra-macros v0.1.0 2023-09-26T00:27:41,140 Downloaded nalgebra v0.29.0 2023-09-26T00:27:41,558 Downloaded lzma-sys v0.1.20 2023-09-26T00:27:42,158 Downloaded libdeflater v0.12.0 2023-09-26T00:27:42,195 Downloaded libdeflate-sys v0.12.0 2023-09-26T00:27:42,348 Downloaded itoa v1.0.9 2023-09-26T00:27:42,370 Downloaded itertools-num v0.1.3 2023-09-26T00:27:42,389 Downloaded indicatif v0.17.5 2023-09-26T00:27:42,451 Downloaded ieee754 v0.2.6 2023-09-26T00:27:42,478 Downloaded getset v0.1.2 2023-09-26T00:27:42,511 Downloaded fs-utils v1.1.4 2023-09-26T00:27:42,524 Downloaded flume v0.10.14 2023-09-26T00:27:42,586 Downloaded feature-probe v0.1.1 2023-09-26T00:27:42,607 Downloaded enum-map-derive v0.6.0 2023-09-26T00:27:42,623 Downloaded enum-map v1.1.1 2023-09-26T00:27:42,649 Downloaded editdistancek v1.0.2 2023-09-26T00:27:42,671 Downloaded console v0.15.7 2023-09-26T00:27:42,725 Downloaded colored v2.0.4 2023-09-26T00:27:42,760 Downloaded bitflags v2.3.3 2023-09-26T00:27:42,804 Downloaded bio-types v1.0.0 2023-09-26T00:27:42,833 Downloaded bio v1.3.1 2023-09-26T00:27:43,067 🔗 Found pyo3 bindings 2023-09-26T00:27:43,343 🐍 Found CPython 3.11 at /usr/bin/python3 2023-09-26T00:27:43,343 📡 Using build options features from pyproject.toml 2023-09-26T00:27:43,353 pyft-0.1.5.dist-info 2023-09-26T00:27:43,354 Checking for Rust toolchain.... 2023-09-26T00:27:43,355 Running `maturin pep517 write-dist-info --metadata-directory /tmp/pip-modern-metadata-pc9lcmn5 --interpreter /usr/bin/python3` 2023-09-26T00:27:43,378 Preparing metadata (pyproject.toml): finished with status 'done' 2023-09-26T00:27:43,382 Source in /tmp/pip-wheel-a17hmpql/pyft_02dd6a981e8c40cf92d233b53ba560e5 has version 0.1.5, which satisfies requirement pyft==0.1.5 from https://files.pythonhosted.org/packages/02/93/e6e05f3380af83b5c4b010925934d31dba5527b59d0f256aef8bd6b6b0d1/pyft-0.1.5.tar.gz 2023-09-26T00:27:43,383 Removed pyft==0.1.5 from https://files.pythonhosted.org/packages/02/93/e6e05f3380af83b5c4b010925934d31dba5527b59d0f256aef8bd6b6b0d1/pyft-0.1.5.tar.gz from build tracker '/tmp/pip-build-tracker-nmvl6zhl' 2023-09-26T00:27:43,388 Created temporary directory: /tmp/pip-unpack-rwavfx2z 2023-09-26T00:27:43,389 Created temporary directory: /tmp/pip-unpack-s8x4m_u7 2023-09-26T00:27:43,391 Building wheels for collected packages: pyft 2023-09-26T00:27:43,396 Created temporary directory: /tmp/pip-wheel-ojskxv53 2023-09-26T00:27:43,396 Destination directory: /tmp/pip-wheel-ojskxv53 2023-09-26T00:27:43,399 Building wheel for pyft (pyproject.toml): started 2023-09-26T00:27:43,401 Running command Building wheel for pyft (pyproject.toml) 2023-09-26T00:27:43,593 Running `maturin pep517 build-wheel -i /usr/bin/python3 --compatibility off` 2023-09-26T00:27:44,718 🔗 Found pyo3 bindings 2023-09-26T00:27:45,261 🐍 Found CPython 3.11 at /usr/bin/python3 2023-09-26T00:27:45,262 📡 Using build options features from pyproject.toml 2023-09-26T00:27:46,669 Compiling autocfg v1.1.0 2023-09-26T00:27:46,670 Compiling libc v0.2.147 2023-09-26T00:27:46,671 Compiling proc-macro2 v1.0.66 2023-09-26T00:27:46,673 Compiling unicode-ident v1.0.11 2023-09-26T00:27:49,631 Compiling cfg-if v1.0.0 2023-09-26T00:27:49,777 Compiling pkg-config v0.3.27 2023-09-26T00:27:54,798 Compiling quote v1.0.31 2023-09-26T00:27:56,868 Compiling syn v1.0.109 2023-09-26T00:27:57,944 Compiling jobserver v0.1.26 2023-09-26T00:27:57,945 Compiling syn v2.0.26 2023-09-26T00:27:59,749 Compiling cc v1.0.79 2023-09-26T00:28:11,837 Compiling libm v0.2.7 2023-09-26T00:28:11,893 Compiling num-traits v0.2.15 2023-09-26T00:28:13,114 Compiling memchr v2.5.0 2023-09-26T00:28:15,806 Compiling cmake v0.1.50 2023-09-26T00:28:19,395 Compiling libz-sys v1.1.9 2023-09-26T00:28:34,599 Compiling scopeguard v1.2.0 2023-09-26T00:28:35,036 Compiling getrandom v0.2.10 2023-09-26T00:28:36,738 Compiling openssl-src v111.26.0+1.1.1u 2023-09-26T00:28:38,774 Compiling target-lexicon v0.12.10 2023-09-26T00:28:43,448 Compiling openssl-sys v0.9.90 2023-09-26T00:28:47,380 Compiling aho-corasick v1.0.2 2023-09-26T00:28:51,535 Compiling thiserror v1.0.43 2023-09-26T00:28:53,267 Compiling regex-syntax v0.7.4 2023-09-26T00:29:08,106 Compiling lazy_static v1.4.0 2023-09-26T00:29:08,549 Compiling thiserror-impl v1.0.43 2023-09-26T00:29:16,488 Compiling regex-automata v0.3.3 2023-09-26T00:29:29,422 Compiling memoffset v0.9.0 2023-09-26T00:29:30,609 Compiling lock_api v0.4.10 2023-09-26T00:29:31,695 Compiling semver v0.1.20 2023-09-26T00:29:34,283 Compiling crossbeam-utils v0.8.16 2023-09-26T00:29:36,090 Compiling version_check v0.9.4 2023-09-26T00:29:38,809 Compiling rustversion v1.0.14 2023-09-26T00:29:41,439 Compiling regex v1.9.1 2023-09-26T00:29:58,101 Compiling rustc_version v0.1.7 2023-09-26T00:29:59,898 Compiling pyo3-build-config v0.19.1 2023-09-26T00:30:07,802 Compiling bzip2-sys v0.1.11+1.0.8 2023-09-26T00:30:09,520 Compiling curl-sys v0.4.63+curl-8.1.2 2023-09-26T00:30:12,554 Compiling lzma-sys v0.1.20 2023-09-26T00:30:15,125 Compiling num-integer v0.1.45 2023-09-26T00:30:16,262 Compiling tinyvec_macros v0.1.1 2023-09-26T00:30:16,402 Compiling serde v1.0.172 2023-09-26T00:30:18,274 Compiling quick-error v1.2.3 2023-09-26T00:30:18,539 Compiling fs-utils v1.1.4 2023-09-26T00:30:19,792 Compiling tinyvec v1.6.0 2023-09-26T00:31:00,491 Compiling newtype_derive v0.1.6 2023-09-26T00:31:07,656 Compiling serde_derive v1.0.172 2023-09-26T00:31:08,194 Compiling rand_core v0.6.4 2023-09-26T00:31:10,168 Compiling num_cpus v1.16.0 2023-09-26T00:31:15,406 Compiling matrixmultiply v0.3.7 2023-09-26T00:31:16,668 Compiling crossbeam-epoch v0.9.15 2023-09-26T00:31:17,502 Compiling glob v0.3.1 2023-09-26T00:31:18,247 Compiling ppv-lite86 v0.2.17 2023-09-26T00:31:21,192 Compiling byteorder v1.4.3 2023-09-26T00:31:21,520 Compiling heck v0.4.1 2023-09-26T00:31:23,041 Compiling bytemuck v1.13.1 2023-09-26T00:31:23,518 Compiling either v1.8.1 2023-09-26T00:31:24,859 Compiling crc32fast v1.3.2 2023-09-26T00:31:24,909 Compiling once_cell v1.18.0 2023-09-26T00:31:26,567 Compiling paste v1.0.14 2023-09-26T00:31:26,617 Compiling rustix v0.38.4 2023-09-26T00:31:29,278 Compiling safe_arch v0.7.1 2023-09-26T00:31:29,446 Compiling strum_macros v0.24.3 2023-09-26T00:31:38,051 Compiling hts-sys v2.1.1 2023-09-26T00:31:40,829 Compiling rand_chacha v0.3.1 2023-09-26T00:31:47,829 Compiling unicode-normalization v0.1.22 2023-09-26T00:31:53,164 Compiling proc-macro-error-attr v1.0.4 2023-09-26T00:31:53,670 Compiling derive-new v0.5.9 2023-09-26T00:31:54,394 Compiling num-complex v0.4.3 2023-09-26T00:31:59,193 Compiling libdeflate-sys v0.12.0 2023-09-26T00:32:00,027 Compiling num-rational v0.4.1 2023-09-26T00:32:00,911 Compiling typenum v1.16.0 2023-09-26T00:32:01,178 Compiling bitflags v2.3.3 2023-09-26T00:32:03,346 Compiling unicode-bidi v0.3.13 2023-09-26T00:32:06,436 Compiling futures-core v0.3.28 2023-09-26T00:32:07,735 Compiling adler v1.0.2 2023-09-26T00:32:08,707 Compiling rawpointer v0.2.1 2023-09-26T00:32:08,976 Compiling percent-encoding v2.3.0 2023-09-26T00:32:11,045 Compiling linux-raw-sys v0.4.3 2023-09-26T00:32:20,392 Compiling form_urlencoded v1.2.0 2023-09-26T00:32:27,254 Compiling miniz_oxide v0.7.1 2023-09-26T00:32:33,104 Compiling idna v0.4.0 2023-09-26T00:32:35,487 Compiling bio-types v1.0.0 2023-09-26T00:32:46,298 Compiling rand v0.8.5 2023-09-26T00:32:48,011 Compiling wide v0.7.11 2023-09-26T00:32:55,874 Compiling proc-macro-error v1.0.4 2023-09-26T00:32:57,079 Compiling pin-project-internal v1.1.2 2023-09-26T00:32:59,070 Compiling approx v0.5.1 2023-09-26T00:32:59,964 Compiling indexmap v1.9.3 2023-09-26T00:33:01,165 Compiling custom_derive v0.1.7 2023-09-26T00:33:01,331 Compiling rayon-core v1.11.0 2023-09-26T00:33:02,347 Compiling log v0.4.19 2023-09-26T00:33:05,011 Compiling anyhow v1.0.72 2023-09-26T00:33:07,011 Compiling io-lifetimes v1.0.11 2023-09-26T00:33:09,092 Compiling feature-probe v0.1.1 2023-09-26T00:33:10,094 Compiling bv v0.11.1 2023-09-26T00:33:10,989 Compiling pin-project v1.1.2 2023-09-26T00:33:11,206 Compiling simba v0.6.0 2023-09-26T00:33:12,234 Compiling rand_distr v0.4.3 2023-09-26T00:33:16,573 Compiling flate2 v1.0.26 2023-09-26T00:33:20,054 Compiling crossbeam-deque v0.8.3 2023-09-26T00:33:24,000 Compiling url v2.4.0 2023-09-26T00:33:47,632 Compiling is-terminal v0.4.9 2023-09-26T00:33:47,845 Compiling pyo3-ffi v0.19.1 2023-09-26T00:33:49,736 Compiling itertools v0.10.5 2023-09-26T00:33:50,869 Compiling crossbeam-channel v0.5.8 2023-09-26T00:33:59,312 Compiling spin v0.9.8 2023-09-26T00:34:01,044 Compiling nalgebra-macros v0.1.0 2023-09-26T00:34:05,797 Compiling nanorand v0.7.0 2023-09-26T00:34:08,945 Compiling parking_lot_core v0.9.8 2023-09-26T00:34:09,526 Compiling humantime v2.1.0 2023-09-26T00:34:10,564 Compiling termcolor v1.2.0 2023-09-26T00:34:13,341 Compiling portable-atomic v1.4.1 2023-09-26T00:34:16,357 Compiling hashbrown v0.12.3 2023-09-26T00:34:17,263 Compiling ieee754 v0.2.6 2023-09-26T00:34:18,000 Compiling linear-map v1.2.0 2023-09-26T00:34:19,617 Compiling futures-sink v0.3.28 2023-09-26T00:34:19,890 Compiling rustix v0.37.23 2023-09-26T00:34:22,942 Compiling flume v0.10.14 2023-09-26T00:34:34,977 Compiling nalgebra v0.29.0 2023-09-26T00:34:39,241 Compiling core_affinity v0.8.0 2023-09-26T00:34:39,993 Compiling enum-map-derive v0.6.0 2023-09-26T00:34:43,704 Compiling csv-core v0.1.10 2023-09-26T00:34:47,687 Compiling atty v0.2.14 2023-09-26T00:34:47,983 Compiling tempfile v3.6.0 2023-09-26T00:34:49,134 Compiling itoa v1.0.9 2023-09-26T00:34:49,984 Compiling bit-vec v0.6.3 2023-09-26T00:34:50,341 Compiling linux-raw-sys v0.3.8 2023-09-26T00:34:51,968 Compiling ryu v1.0.15 2023-09-26T00:34:54,287 Compiling smallvec v1.11.0 2023-09-26T00:34:56,397 Compiling fixedbitset v0.4.2 2023-09-26T00:34:59,382 Compiling unicode-width v0.1.10 2023-09-26T00:34:59,809 Compiling bytes v1.4.0 2023-09-26T00:35:04,168 Compiling bitflags v1.3.2 2023-09-26T00:35:08,731 Compiling console v0.15.7 2023-09-26T00:35:24,327 Compiling petgraph v0.6.3 2023-09-26T00:35:39,332 Compiling csv v1.2.2 2023-09-26T00:35:47,216 Compiling bit-set v0.5.3 2023-09-26T00:35:48,719 Compiling env_logger v0.9.3 2023-09-26T00:35:50,336 Compiling enum-map v1.1.1 2023-09-26T00:36:02,509 Compiling rayon v1.7.0 2023-09-26T00:36:10,628 Compiling getset v0.1.2 2023-09-26T00:36:22,119 Compiling statrs v0.16.0 2023-09-26T00:36:23,526 Compiling colored v2.0.4 2023-09-26T00:36:29,719 Compiling niffler v2.5.0 2023-09-26T00:36:33,390 Compiling ndarray v0.15.6 2023-09-26T00:36:44,573 Compiling multimap v0.8.3 2023-09-26T00:36:45,844 Compiling vec_map v0.8.2 2023-09-26T00:36:47,381 Compiling pyo3 v0.19.1 2023-09-26T00:36:48,788 Compiling fxhash v0.2.1 2023-09-26T00:36:49,437 Compiling pyo3-macros-backend v0.19.1 2023-09-26T00:36:53,903 Compiling itertools-num v0.1.3 2023-09-26T00:36:54,287 Compiling ordered-float v3.7.0 2023-09-26T00:36:57,858 Compiling number_prefix v0.4.0 2023-09-26T00:36:58,579 Compiling triple_accel v0.4.0 2023-09-26T00:37:07,396 Compiling fastrand v1.9.0 2023-09-26T00:37:10,006 Compiling editdistancek v1.0.2 2023-09-26T00:37:11,044 Compiling bytecount v0.6.3 2023-09-26T00:37:11,873 Compiling fibertools-rs v0.2.6 (/tmp/pip-wheel-a17hmpql/pyft_02dd6a981e8c40cf92d233b53ba560e5/local_dependencies/fibertools-rs) 2023-09-26T00:37:13,408 Compiling strum v0.25.0 2023-09-26T00:37:24,926 Compiling bio v1.3.1 2023-09-26T00:37:25,169 Compiling indicatif v0.17.5 2023-09-26T00:37:30,312 Compiling pyo3-macros v0.19.1 2023-09-26T00:37:35,439 Compiling parking_lot v0.12.1 2023-09-26T00:37:51,391 Compiling unindent v0.1.11 2023-09-26T00:37:53,767 Compiling anstyle v1.0.1 2023-09-26T00:37:56,071 Compiling indoc v1.0.9 2023-09-26T00:38:00,959 Compiling env_logger v0.10.0 2023-09-26T00:38:50,560 Compiling libdeflater v0.12.0 2023-09-26T00:38:51,455 Compiling gzp v0.11.3 2023-09-26T00:40:45,236 Compiling rust-htslib v0.44.1 2023-09-26T00:40:47,173 error[E0308]: mismatched types 2023-09-26T00:40:47,174 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bam/record.rs:154:16 2023-09-26T00:40:47,175 | 2023-09-26T00:40:47,175 154 | l: sam_copy.len() as u64, 2023-09-26T00:40:47,176 | ^^^^^^^^^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-09-26T00:40:47,181 error[E0308]: mismatched types 2023-09-26T00:40:47,182 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bam/record.rs:155:16 2023-09-26T00:40:47,182 | 2023-09-26T00:40:47,183 155 | m: sam_copy.len() as u64, 2023-09-26T00:40:47,183 | ^^^^^^^^^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-09-26T00:40:47,575 error[E0308]: mismatched types 2023-09-26T00:40:47,576 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bam/record.rs:2324:17 2023-09-26T00:40:47,577 | 2023-09-26T00:40:47,577 2319 | let ret = hts_sys::bam_mods_query_type( 2023-09-26T00:40:47,578 | ---------------------------- arguments to this function are incorrect 2023-09-26T00:40:47,578 ... 2023-09-26T00:40:47,579 2324 | &mut canonical, 2023-09-26T00:40:47,580 | ^^^^^^^^^^^^^^ expected `*mut u8`, found `&mut i8` 2023-09-26T00:40:47,580 | 2023-09-26T00:40:47,581 = note: expected raw pointer `*mut u8` 2023-09-26T00:40:47,581 found mutable reference `&mut i8` 2023-09-26T00:40:47,582 note: function defined here 2023-09-26T00:40:47,583 --> /tmp/pip-wheel-a17hmpql/pyft_02dd6a981e8c40cf92d233b53ba560e5/target/release/build/hts-sys-82bf3d2c8804e649/out/bindings.rs:9439:12 2023-09-26T00:40:47,583 | 2023-09-26T00:40:47,584 9439 | pub fn bam_mods_query_type( 2023-09-26T00:40:47,585 | ^^^^^^^^^^^^^^^^^^^ 2023-09-26T00:40:47,754 error[E0308]: mismatched types 2023-09-26T00:40:47,755 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bam/mod.rs:1128:29 2023-09-26T00:40:47,757 | 2023-09-26T00:40:47,758 1128 | (*rec).l_text = l_text as u64; 2023-09-26T00:40:47,759 | ------------- ^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-09-26T00:40:47,761 | | 2023-09-26T00:40:47,762 | expected due to the type of this binding 2023-09-26T00:40:47,796 error[E0308]: mismatched types 2023-09-26T00:40:47,797 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bam/mod.rs:1393:45 2023-09-26T00:40:47,797 | 2023-09-26T00:40:47,798 1393 | let rec = htslib::sam_hdr_parse((l_text + 1) as u64, text as *const c_char); 2023-09-26T00:40:47,799 | --------------------- ^^^^^^^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-09-26T00:40:47,800 | | 2023-09-26T00:40:47,801 | arguments to this function are incorrect 2023-09-26T00:40:47,802 | 2023-09-26T00:40:47,803 note: function defined here 2023-09-26T00:40:47,804 --> /tmp/pip-wheel-a17hmpql/pyft_02dd6a981e8c40cf92d233b53ba560e5/target/release/build/hts-sys-82bf3d2c8804e649/out/bindings.rs:8520:12 2023-09-26T00:40:47,806 | 2023-09-26T00:40:47,807 8520 | pub fn sam_hdr_parse(l_text: size_t, text: *const ::std::os::raw::c_char) -> *mut sam_hdr_t; 2023-09-26T00:40:47,808 | ^^^^^^^^^^^^^ 2023-09-26T00:40:47,809 help: you can convert a `u64` to a `u32` and panic if the converted value doesn't fit 2023-09-26T00:40:47,810 | 2023-09-26T00:40:47,811 1393 | let rec = htslib::sam_hdr_parse(((l_text + 1) as u64).try_into().unwrap(), text as *const c_char); 2023-09-26T00:40:47,813 | + +++++++++++++++++++++ 2023-09-26T00:40:47,815 error[E0308]: mismatched types 2023-09-26T00:40:47,816 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bam/mod.rs:1395:29 2023-09-26T00:40:47,817 | 2023-09-26T00:40:47,818 1395 | (*rec).l_text = l_text as u64; 2023-09-26T00:40:47,819 | ------------- ^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-09-26T00:40:47,819 | | 2023-09-26T00:40:47,820 | expected due to the type of this binding 2023-09-26T00:40:48,048 error[E0308]: mismatched types 2023-09-26T00:40:48,048 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bcf/record.rs:1011:48 2023-09-26T00:40:48,049 | 2023-09-26T00:40:48,049 1011 | let rm_set = unsafe { htslib::kbs_init(remove.len() as u64) }; 2023-09-26T00:40:48,050 | ---------------- ^^^^^^^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-09-26T00:40:48,051 | | 2023-09-26T00:40:48,051 | arguments to this function are incorrect 2023-09-26T00:40:48,052 | 2023-09-26T00:40:48,052 note: function defined here 2023-09-26T00:40:48,053 --> /tmp/pip-wheel-a17hmpql/pyft_02dd6a981e8c40cf92d233b53ba560e5/target/release/build/hts-sys-82bf3d2c8804e649/out/bindings.rs:11642:12 2023-09-26T00:40:48,054 | 2023-09-26T00:40:48,054 11642 | pub fn kbs_init(ni: size_t) -> *mut kbitset_t; 2023-09-26T00:40:48,055 | ^^^^^^^^ 2023-09-26T00:40:48,055 help: you can convert a `u64` to a `u32` and panic if the converted value doesn't fit 2023-09-26T00:40:48,056 | 2023-09-26T00:40:48,057 1011 | let rm_set = unsafe { htslib::kbs_init((remove.len() as u64).try_into().unwrap()) }; 2023-09-26T00:40:48,057 | + +++++++++++++++++++++ 2023-09-26T00:40:48,278 error[E0308]: mismatched types 2023-09-26T00:40:48,279 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bgzf/mod.rs:118:17 2023-09-26T00:40:48,280 | 2023-09-26T00:40:48,280 115 | htslib::bgzf_read( 2023-09-26T00:40:48,281 | ----------------- arguments to this function are incorrect 2023-09-26T00:40:48,282 ... 2023-09-26T00:40:48,283 118 | buf.len() as u64, 2023-09-26T00:40:48,283 | ^^^^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-09-26T00:40:48,284 | 2023-09-26T00:40:48,285 note: function defined here 2023-09-26T00:40:48,286 --> /tmp/pip-wheel-a17hmpql/pyft_02dd6a981e8c40cf92d233b53ba560e5/target/release/build/hts-sys-82bf3d2c8804e649/out/bindings.rs:10097:12 2023-09-26T00:40:48,286 | 2023-09-26T00:40:48,287 10097 | pub fn bgzf_read(fp: *mut BGZF, data: *mut ::std::os::raw::c_void, length: size_t) -> ssize_t; 2023-09-26T00:40:48,287 | ^^^^^^^^^ 2023-09-26T00:40:48,288 help: you can convert a `u64` to a `u32` and panic if the converted value doesn't fit 2023-09-26T00:40:48,289 | 2023-09-26T00:40:48,289 118 | (buf.len() as u64).try_into().unwrap(), 2023-09-26T00:40:48,290 | + +++++++++++++++++++++ 2023-09-26T00:40:48,309 error[E0308]: mismatched types 2023-09-26T00:40:48,310 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bgzf/mod.rs:264:17 2023-09-26T00:40:48,311 | 2023-09-26T00:40:48,311 261 | htslib::bgzf_write( 2023-09-26T00:40:48,312 | ------------------ arguments to this function are incorrect 2023-09-26T00:40:48,313 ... 2023-09-26T00:40:48,314 264 | buf.len() as u64, 2023-09-26T00:40:48,315 | ^^^^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-09-26T00:40:48,315 | 2023-09-26T00:40:48,316 note: function defined here 2023-09-26T00:40:48,317 --> /tmp/pip-wheel-a17hmpql/pyft_02dd6a981e8c40cf92d233b53ba560e5/target/release/build/hts-sys-82bf3d2c8804e649/out/bindings.rs:10100:12 2023-09-26T00:40:48,318 | 2023-09-26T00:40:48,319 10100 | pub fn bgzf_write( 2023-09-26T00:40:48,319 | ^^^^^^^^^^ 2023-09-26T00:40:48,320 help: you can convert a `u64` to a `u32` and panic if the converted value doesn't fit 2023-09-26T00:40:48,320 | 2023-09-26T00:40:48,321 264 | (buf.len() as u64).try_into().unwrap(), 2023-09-26T00:40:48,322 | + +++++++++++++++++++++ 2023-09-26T00:40:48,488 For more information about this error, try `rustc --explain E0308`. 2023-09-26T00:40:48,503 error: could not compile `rust-htslib` (lib) due to 9 previous errors 2023-09-26T00:40:48,525 💥 maturin failed 2023-09-26T00:40:48,526 Caused by: Failed to build a native library through cargo 2023-09-26T00:40:48,533 Caused by: Cargo build finished with "exit status: 101": `"cargo" "rustc" "--features" "pyo3/extension-module" "--message-format" "json-render-diagnostics" "--manifest-path" "/tmp/pip-wheel-a17hmpql/pyft_02dd6a981e8c40cf92d233b53ba560e5/Cargo.toml" "--release" "--lib"` 2023-09-26T00:40:48,533 Error: command ['maturin', 'pep517', 'build-wheel', '-i', '/usr/bin/python3', '--compatibility', 'off'] returned non-zero exit status 1 2023-09-26T00:40:48,550 ERROR: [present-rich] Building wheel for pyft (pyproject.toml) exited with 1 2023-09-26T00:40:48,563 [bold magenta]full command[/]: [blue]/usr/bin/python3 /usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py build_wheel /tmp/tmpv9rkfs0z[/] 2023-09-26T00:40:48,563 [bold magenta]cwd[/]: /tmp/pip-wheel-a17hmpql/pyft_02dd6a981e8c40cf92d233b53ba560e5 2023-09-26T00:40:48,564 Building wheel for pyft (pyproject.toml): finished with status 'error' 2023-09-26T00:40:48,567 ERROR: Failed building wheel for pyft 2023-09-26T00:40:48,569 Failed to build pyft 2023-09-26T00:40:48,570 ERROR: Failed to build one or more wheels 2023-09-26T00:40:48,572 Exception information: 2023-09-26T00:40:48,572 Traceback (most recent call last): 2023-09-26T00:40:48,572 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper 2023-09-26T00:40:48,572 status = run_func(*args) 2023-09-26T00:40:48,572 ^^^^^^^^^^^^^^^ 2023-09-26T00:40:48,572 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper 2023-09-26T00:40:48,572 return func(self, options, args) 2023-09-26T00:40:48,572 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-26T00:40:48,572 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 181, in run 2023-09-26T00:40:48,572 raise CommandError("Failed to build one or more wheels") 2023-09-26T00:40:48,572 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2023-09-26T00:40:48,576 Removed build tracker: '/tmp/pip-build-tracker-nmvl6zhl'