2023-09-26T02:33:20,068 Created temporary directory: /tmp/pip-build-tracker-2lvoko8x 2023-09-26T02:33:20,069 Initialized build tracking at /tmp/pip-build-tracker-2lvoko8x 2023-09-26T02:33:20,069 Created build tracker: /tmp/pip-build-tracker-2lvoko8x 2023-09-26T02:33:20,070 Entered build tracker: /tmp/pip-build-tracker-2lvoko8x 2023-09-26T02:33:20,071 Created temporary directory: /tmp/pip-wheel-gh6cs3or 2023-09-26T02:33:20,074 Created temporary directory: /tmp/pip-ephem-wheel-cache-60_1ws61 2023-09-26T02:33:20,095 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-26T02:33:20,099 2 location(s) to search for versions of pyft: 2023-09-26T02:33:20,099 * https://pypi.org/simple/pyft/ 2023-09-26T02:33:20,099 * https://www.piwheels.org/simple/pyft/ 2023-09-26T02:33:20,100 Fetching project page and analyzing links: https://pypi.org/simple/pyft/ 2023-09-26T02:33:20,101 Getting page https://pypi.org/simple/pyft/ 2023-09-26T02:33:20,102 Found index url https://pypi.org/simple/ 2023-09-26T02:33:20,240 Fetched page https://pypi.org/simple/pyft/ as application/vnd.pypi.simple.v1+json 2023-09-26T02:33:20,245 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/d7/62/f180b758be35243ef8a74361f533c974f7294541f16c9bc82cdcc29983e0/pyft-0.1.0-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-09-26T02:33:20,246 Found link https://files.pythonhosted.org/packages/c5/b3/4729bed033d7a353ec71381fa9e1ade1bf7a186a837ed3627b31265ddede/pyft-0.1.0.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.0 2023-09-26T02:33:20,246 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/cb/27/9e42da52a20d9b691ef37a8828764cd904af507b9107a386d55614566304/pyft-0.1.1-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-09-26T02:33:20,247 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/42/ec/1bf1615986fee7e2940dcd8902ef14457658d94208b01d95549253b62843/pyft-0.1.2-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-09-26T02:33:20,248 Found link https://files.pythonhosted.org/packages/0a/0b/139d65d937bc185b68d3eff484ce5c3ca5e3bfc3150b2020d0b604b64d66/pyft-0.1.2.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.2 2023-09-26T02:33:20,249 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/04/9b/b53f6e949dabc348f4bf60f9d11a473764e589d6041be074cbcf20a42900/pyft-0.1.3-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-09-26T02:33:20,250 Found link https://files.pythonhosted.org/packages/ab/26/5c78ed72341a5f6b18d9f84a1e9bc91739519c613d9051f732bf902f363d/pyft-0.1.3.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.3 2023-09-26T02:33:20,251 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/5f/76/cfcbbab37550bc51a7e8ea1bc59451ae618fb3eab2f20f7aa097bc615268/pyft-0.1.4-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-09-26T02:33:20,252 Found link https://files.pythonhosted.org/packages/c0/f0/c6f569449c4bbc95ba0281b2423d2c22fd957a7279f33b74ebd6aa94fefb/pyft-0.1.4.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.4 2023-09-26T02:33:20,252 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/b3/d8/e0bcc1d4dda64ccb39a697d7a2cf2f0afc1edddea2f97aa3b7351ada002d/pyft-0.1.5-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-09-26T02:33:20,253 Found link https://files.pythonhosted.org/packages/02/93/e6e05f3380af83b5c4b010925934d31dba5527b59d0f256aef8bd6b6b0d1/pyft-0.1.5.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.5 2023-09-26T02:33:20,254 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/7f/54/78d366d8c40d15e7e6ea673715003e9d3a1799bec389136fd3646cd2ee41/pyft-0.1.6-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-09-26T02:33:20,255 Found link https://files.pythonhosted.org/packages/a3/a5/862a667ea22060468fbb9a217ce8d25c4eda9ff6c64b79f5887e7d4123be/pyft-0.1.6.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.6 2023-09-26T02:33:20,256 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/ba/62/742233e64de296bde6230c31c8ac312c38ca40fa09f10cb36f8c3da3ba1b/pyft-0.1.7-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-09-26T02:33:20,257 Found link https://files.pythonhosted.org/packages/26/f9/bfc6b3b66cd901649cf13ea23361c69321e46ed3b1fe73981863371c14ea/pyft-0.1.7.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.7 2023-09-26T02:33:20,257 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/0b/b9/8bdacd074d2a6f38e3c2c3508cb1ddd1d1c00963e365f44c979bbd8c4df0/pyft-0.1.8-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-09-26T02:33:20,258 Found link https://files.pythonhosted.org/packages/ce/e7/c55525cdea4a7421cd6f08f16b85d094a3f95578f8d410ae6849e20ae1aa/pyft-0.1.8.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.8 2023-09-26T02:33:20,259 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/aa/81/12871893127d02cf1d8ad68c808878816523e038fbd8fc69ef390b2d3069/pyft-0.1.9-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-09-26T02:33:20,259 Found link https://files.pythonhosted.org/packages/1e/7e/215d26ce7f6964e59e74252153d7c41d6ffa58f372bc2180bf9365f86a70/pyft-0.1.9.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.9 2023-09-26T02:33:20,260 Fetching project page and analyzing links: https://www.piwheels.org/simple/pyft/ 2023-09-26T02:33:20,261 Getting page https://www.piwheels.org/simple/pyft/ 2023-09-26T02:33:20,262 Found index url https://www.piwheels.org/simple/ 2023-09-26T02:33:20,418 Fetched page https://www.piwheels.org/simple/pyft/ as text/html 2023-09-26T02:33:20,419 Skipping link: not a file: https://www.piwheels.org/simple/pyft/ 2023-09-26T02:33:20,420 Skipping link: not a file: https://pypi.org/simple/pyft/ 2023-09-26T02:33:20,439 Given no hashes to check 1 links for project 'pyft': discarding no candidates 2023-09-26T02:33:20,457 Collecting pyft==0.1.9 2023-09-26T02:33:20,459 Created temporary directory: /tmp/pip-unpack-24zp27ij 2023-09-26T02:33:20,940 Downloading pyft-0.1.9.tar.gz (8.3 MB) 2023-09-26T02:33:23,015 Added pyft==0.1.9 from https://files.pythonhosted.org/packages/1e/7e/215d26ce7f6964e59e74252153d7c41d6ffa58f372bc2180bf9365f86a70/pyft-0.1.9.tar.gz to build tracker '/tmp/pip-build-tracker-2lvoko8x' 2023-09-26T02:33:23,019 Created temporary directory: /tmp/pip-build-env-wcogyje4 2023-09-26T02:33:23,024 Installing build dependencies: started 2023-09-26T02:33:23,025 Running command pip subprocess to install build dependencies 2023-09-26T02:33:24,473 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-09-26T02:33:25,005 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-26T02:33:26,319 Collecting maturin<2.0,>=1.1 2023-09-26T02:33:26,321 Obtaining dependency information for maturin<2.0,>=1.1 from https://files.pythonhosted.org/packages/c1/22/4e716c0dfe799391176605ee4175c9dd1562dd057bb44f0358a365b6d8ce/maturin-1.2.3-py3-none-manylinux_2_17_armv7l.manylinux2014_armv7l.musllinux_1_1_armv7l.whl.metadata 2023-09-26T02:33:26,327 Using cached maturin-1.2.3-py3-none-manylinux_2_17_armv7l.manylinux2014_armv7l.musllinux_1_1_armv7l.whl.metadata (18 kB) 2023-09-26T02:33:26,479 Using cached maturin-1.2.3-py3-none-manylinux_2_17_armv7l.manylinux2014_armv7l.musllinux_1_1_armv7l.whl (9.2 MB) 2023-09-26T02:33:28,962 Installing collected packages: maturin 2023-09-26T02:33:29,767 Successfully installed maturin-1.2.3 2023-09-26T02:33:30,338 Installing build dependencies: finished with status 'done' 2023-09-26T02:33:30,342 Getting requirements to build wheel: started 2023-09-26T02:33:30,343 Running command Getting requirements to build wheel 2023-09-26T02:33:30,540 Getting requirements to build wheel: finished with status 'done' 2023-09-26T02:33:30,543 Created temporary directory: /tmp/pip-modern-metadata-h3rnlqw1 2023-09-26T02:33:30,545 Preparing metadata (pyproject.toml): started 2023-09-26T02:33:30,546 Running command Preparing metadata (pyproject.toml) 2023-09-26T02:33:31,196 Updating crates.io index 2023-09-26T02:33:33,714 Downloading crates ... 2023-09-26T02:33:34,967 Downloaded cmake v0.1.50 2023-09-26T02:33:34,993 Downloaded gzp v0.11.3 2023-09-26T02:33:35,251 Downloaded hts-sys v2.1.1 2023-09-26T02:33:36,611 Downloaded bio v1.3.1 2023-09-26T02:33:36,784 Downloaded curl-sys v0.4.63+curl-8.1.2 2023-09-26T02:33:41,660 Downloaded console v0.15.7 2023-09-26T02:33:41,707 Downloaded csv v1.2.2 2023-09-26T02:33:42,014 Downloaded bzip2-sys v0.1.11+1.0.8 2023-09-26T02:33:42,194 Downloaded bio-types v1.0.0 2023-09-26T02:33:42,223 Downloaded flume v0.10.14 2023-09-26T02:33:42,283 Downloaded custom_derive v0.1.7 2023-09-26T02:33:42,302 Downloaded wide v0.7.11 2023-09-26T02:33:42,385 Downloaded vec_map v0.8.2 2023-09-26T02:33:42,400 Downloaded triple_accel v0.4.0 2023-09-26T02:33:42,434 Downloaded tempfile v3.6.0 2023-09-26T02:33:42,475 Downloaded strum v0.25.0 2023-09-26T02:33:42,485 Downloaded statrs v0.16.0 2023-09-26T02:33:42,640 Downloaded spin v0.9.8 2023-09-26T02:33:42,689 Downloaded simba v0.6.0 2023-09-26T02:33:42,744 Downloaded serde_derive v1.0.172 2023-09-26T02:33:42,865 Downloaded serde v1.0.172 2023-09-26T02:33:42,918 Downloaded semver v0.1.20 2023-09-26T02:33:42,935 Downloaded safe_arch v0.7.1 2023-09-26T02:33:43,021 Downloaded rustix v0.37.23 2023-09-26T02:33:43,415 Downloaded rustc_version v0.1.7 2023-09-26T02:33:43,427 Downloaded rust-htslib v0.44.1 2023-09-26T02:33:43,514 Downloaded quick-error v1.2.3 2023-09-26T02:33:43,540 Downloaded portable-atomic v1.4.1 2023-09-26T02:33:43,684 Downloaded paste v1.0.14 2023-09-26T02:33:43,748 Downloaded ordered-float v3.7.0 2023-09-26T02:33:43,768 Downloaded number_prefix v0.4.0 2023-09-26T02:33:43,782 Downloaded niffler v2.5.0 2023-09-26T02:33:43,825 Downloaded newtype_derive v0.1.6 2023-09-26T02:33:43,843 Downloaded nanorand v0.7.0 2023-09-26T02:33:43,882 Downloaded nalgebra-macros v0.1.0 2023-09-26T02:33:43,898 Downloaded nalgebra v0.29.0 2023-09-26T02:33:44,338 Downloaded lzma-sys v0.1.20 2023-09-26T02:33:45,042 Downloaded linux-raw-sys v0.3.8 2023-09-26T02:33:45,370 Downloaded linear-map v1.2.0 2023-09-26T02:33:45,394 Downloaded libdeflater v0.12.0 2023-09-26T02:33:45,429 Downloaded libdeflate-sys v0.12.0 2023-09-26T02:33:45,587 Downloaded itertools-num v0.1.3 2023-09-26T02:33:45,605 Downloaded io-lifetimes v1.0.11 2023-09-26T02:33:45,646 Downloaded indicatif v0.17.5 2023-09-26T02:33:45,711 Downloaded ieee754 v0.2.6 2023-09-26T02:33:45,739 Downloaded fxhash v0.2.1 2023-09-26T02:33:45,750 Downloaded fs-utils v1.1.4 2023-09-26T02:33:45,763 Downloaded fastrand v1.9.0 2023-09-26T02:33:45,784 Downloaded enum-map-derive v0.6.0 2023-09-26T02:33:45,793 Downloaded enum-map v1.1.1 2023-09-26T02:33:45,813 Downloaded encode_unicode v0.3.6 2023-09-26T02:33:45,855 Downloaded editdistancek v1.0.2 2023-09-26T02:33:45,873 Downloaded derive-new v0.5.9 2023-09-26T02:33:45,889 Downloaded csv-core v0.1.10 2023-09-26T02:33:45,910 Downloaded core_affinity v0.8.0 2023-09-26T02:33:46,010 🔗 Found pyo3 bindings 2023-09-26T02:33:46,284 🐍 Found CPython 3.11 at /usr/bin/python3 2023-09-26T02:33:46,285 📡 Using build options features from pyproject.toml 2023-09-26T02:33:46,294 pyft-0.1.9.dist-info 2023-09-26T02:33:46,295 Checking for Rust toolchain.... 2023-09-26T02:33:46,295 Running `maturin pep517 write-dist-info --metadata-directory /tmp/pip-modern-metadata-h3rnlqw1 --interpreter /usr/bin/python3` 2023-09-26T02:33:46,318 Preparing metadata (pyproject.toml): finished with status 'done' 2023-09-26T02:33:46,322 Source in /tmp/pip-wheel-gh6cs3or/pyft_a991e766d9ed48469e06181d6f5eeff7 has version 0.1.9, which satisfies requirement pyft==0.1.9 from https://files.pythonhosted.org/packages/1e/7e/215d26ce7f6964e59e74252153d7c41d6ffa58f372bc2180bf9365f86a70/pyft-0.1.9.tar.gz 2023-09-26T02:33:46,323 Removed pyft==0.1.9 from https://files.pythonhosted.org/packages/1e/7e/215d26ce7f6964e59e74252153d7c41d6ffa58f372bc2180bf9365f86a70/pyft-0.1.9.tar.gz from build tracker '/tmp/pip-build-tracker-2lvoko8x' 2023-09-26T02:33:46,328 Created temporary directory: /tmp/pip-unpack-_92o275u 2023-09-26T02:33:46,329 Created temporary directory: /tmp/pip-unpack-3edtgv71 2023-09-26T02:33:46,331 Building wheels for collected packages: pyft 2023-09-26T02:33:46,335 Created temporary directory: /tmp/pip-wheel-fjkapiq3 2023-09-26T02:33:46,336 Destination directory: /tmp/pip-wheel-fjkapiq3 2023-09-26T02:33:46,338 Building wheel for pyft (pyproject.toml): started 2023-09-26T02:33:46,339 Running command Building wheel for pyft (pyproject.toml) 2023-09-26T02:33:46,503 Running `maturin pep517 build-wheel -i /usr/bin/python3 --compatibility off` 2023-09-26T02:33:47,714 🔗 Found pyo3 bindings 2023-09-26T02:33:47,985 🐍 Found CPython 3.11 at /usr/bin/python3 2023-09-26T02:33:47,986 📡 Using build options features from pyproject.toml 2023-09-26T02:33:49,595 Compiling autocfg v1.1.0 2023-09-26T02:33:49,596 Compiling libc v0.2.147 2023-09-26T02:33:49,597 Compiling proc-macro2 v1.0.66 2023-09-26T02:33:49,597 Compiling unicode-ident v1.0.11 2023-09-26T02:33:52,558 Compiling cfg-if v1.0.0 2023-09-26T02:33:52,725 Compiling pkg-config v0.3.27 2023-09-26T02:33:57,877 Compiling quote v1.0.31 2023-09-26T02:33:59,185 Compiling syn v1.0.109 2023-09-26T02:34:00,920 Compiling jobserver v0.1.26 2023-09-26T02:34:01,081 Compiling syn v2.0.26 2023-09-26T02:34:04,054 Compiling cc v1.0.79 2023-09-26T02:34:15,160 Compiling libm v0.2.7 2023-09-26T02:34:16,206 Compiling num-traits v0.2.15 2023-09-26T02:34:16,472 Compiling memchr v2.5.0 2023-09-26T02:34:18,673 Compiling cmake v0.1.50 2023-09-26T02:34:22,290 Compiling libz-sys v1.1.9 2023-09-26T02:34:37,618 Compiling scopeguard v1.2.0 2023-09-26T02:34:38,964 Compiling getrandom v0.2.10 2023-09-26T02:34:40,595 Compiling openssl-src v111.26.0+1.1.1u 2023-09-26T02:34:42,416 Compiling target-lexicon v0.12.10 2023-09-26T02:34:46,708 Compiling openssl-sys v0.9.90 2023-09-26T02:34:50,434 Compiling aho-corasick v1.0.2 2023-09-26T02:34:53,006 Compiling lazy_static v1.4.0 2023-09-26T02:34:53,305 Compiling thiserror v1.0.43 2023-09-26T02:34:55,187 Compiling regex-syntax v0.7.4 2023-09-26T02:35:05,351 Compiling thiserror-impl v1.0.43 2023-09-26T02:35:19,420 Compiling regex-automata v0.3.3 2023-09-26T02:35:31,730 Compiling lock_api v0.4.10 2023-09-26T02:35:32,798 Compiling memoffset v0.9.0 2023-09-26T02:35:34,001 Compiling rustversion v1.0.14 2023-09-26T02:35:36,438 Compiling version_check v0.9.4 2023-09-26T02:35:39,089 Compiling crossbeam-utils v0.8.16 2023-09-26T02:35:40,799 Compiling semver v0.1.20 2023-09-26T02:35:43,453 Compiling regex v1.9.1 2023-09-26T02:35:59,635 Compiling rustc_version v0.1.7 2023-09-26T02:36:01,591 Compiling pyo3-build-config v0.19.1 2023-09-26T02:36:09,394 Compiling lzma-sys v0.1.20 2023-09-26T02:36:11,902 Compiling curl-sys v0.4.63+curl-8.1.2 2023-09-26T02:36:14,714 Compiling bzip2-sys v0.1.11+1.0.8 2023-09-26T02:36:16,304 Compiling num-integer v0.1.45 2023-09-26T02:36:17,374 Compiling quick-error v1.2.3 2023-09-26T02:36:17,853 Compiling tinyvec_macros v0.1.1 2023-09-26T02:36:18,004 Compiling serde v1.0.172 2023-09-26T02:36:19,838 Compiling tinyvec v1.6.0 2023-09-26T02:36:24,546 Compiling fs-utils v1.1.4 2023-09-26T02:36:36,171 Compiling newtype_derive v0.1.6 2023-09-26T02:36:37,255 Compiling serde_derive v1.0.172 2023-09-26T02:36:40,090 Compiling rand_core v0.6.4 2023-09-26T02:36:42,036 Compiling num_cpus v1.16.0 2023-09-26T02:36:51,012 Compiling matrixmultiply v0.3.7 2023-09-26T02:36:52,175 Compiling crossbeam-epoch v0.9.15 2023-09-26T02:36:53,703 Compiling either v1.8.1 2023-09-26T02:36:55,145 Compiling ppv-lite86 v0.2.17 2023-09-26T02:36:58,269 Compiling crc32fast v1.3.2 2023-09-26T02:37:00,049 Compiling once_cell v1.18.0 2023-09-26T02:37:01,704 Compiling glob v0.3.1 2023-09-26T02:37:05,474 Compiling bytemuck v1.13.1 2023-09-26T02:37:07,357 Compiling paste v1.0.14 2023-09-26T02:37:09,014 Compiling byteorder v1.4.3 2023-09-26T02:37:11,446 Compiling heck v0.4.1 2023-09-26T02:37:13,018 Compiling rustix v0.38.4 2023-09-26T02:37:15,554 Compiling strum_macros v0.24.3 2023-09-26T02:37:34,179 Compiling safe_arch v0.7.1 2023-09-26T02:37:34,346 Compiling hts-sys v2.1.1 2023-09-26T02:37:46,794 Compiling rand_chacha v0.3.1 2023-09-26T02:37:53,938 Compiling unicode-normalization v0.1.22 2023-09-26T02:37:59,671 Compiling proc-macro-error-attr v1.0.4 2023-09-26T02:37:59,852 Compiling derive-new v0.5.9 2023-09-26T02:38:01,058 Compiling num-complex v0.4.3 2023-09-26T02:38:03,987 Compiling libdeflate-sys v0.12.0 2023-09-26T02:38:05,320 Compiling num-rational v0.4.1 2023-09-26T02:38:05,848 Compiling rawpointer v0.2.1 2023-09-26T02:38:06,163 Compiling linux-raw-sys v0.4.3 2023-09-26T02:38:06,526 Compiling unicode-bidi v0.3.13 2023-09-26T02:38:06,806 Compiling adler v1.0.2 2023-09-26T02:38:07,661 Compiling percent-encoding v2.3.0 2023-09-26T02:38:09,771 Compiling typenum v1.16.0 2023-09-26T02:38:14,179 Compiling bitflags v2.3.3 2023-09-26T02:38:14,488 Compiling futures-core v0.3.28 2023-09-26T02:38:16,649 Compiling idna v0.4.0 2023-09-26T02:38:22,603 Compiling form_urlencoded v1.2.0 2023-09-26T02:38:24,485 Compiling miniz_oxide v0.7.1 2023-09-26T02:38:35,122 Compiling bio-types v1.0.0 2023-09-26T02:38:40,273 Compiling rand v0.8.5 2023-09-26T02:38:45,957 Compiling wide v0.7.11 2023-09-26T02:38:52,126 Compiling proc-macro-error v1.0.4 2023-09-26T02:38:52,949 Compiling pin-project-internal v1.1.2 2023-09-26T02:38:53,370 Compiling approx v0.5.1 2023-09-26T02:38:54,321 Compiling indexmap v1.9.3 2023-09-26T02:38:55,466 Compiling anyhow v1.0.72 2023-09-26T02:38:57,738 Compiling log v0.4.19 2023-09-26T02:39:00,338 Compiling io-lifetimes v1.0.11 2023-09-26T02:39:02,412 Compiling rayon-core v1.11.0 2023-09-26T02:39:03,406 Compiling feature-probe v0.1.1 2023-09-26T02:39:04,435 Compiling custom_derive v0.1.7 2023-09-26T02:39:04,612 Compiling bv v0.11.1 2023-09-26T02:39:06,850 Compiling rand_distr v0.4.3 2023-09-26T02:39:07,201 Compiling pin-project v1.1.2 2023-09-26T02:39:07,422 Compiling flate2 v1.0.26 2023-09-26T02:39:11,397 Compiling simba v0.6.0 2023-09-26T02:39:14,247 Compiling crossbeam-deque v0.8.3 2023-09-26T02:39:18,879 Compiling is-terminal v0.4.9 2023-09-26T02:39:19,085 Compiling url v2.4.0 2023-09-26T02:39:38,677 Compiling pyo3-ffi v0.19.1 2023-09-26T02:39:40,341 Compiling itertools v0.10.5 2023-09-26T02:39:47,437 Compiling crossbeam-channel v0.5.8 2023-09-26T02:39:56,030 Compiling spin v0.9.8 2023-09-26T02:39:57,815 Compiling nalgebra-macros v0.1.0 2023-09-26T02:39:58,697 Compiling nanorand v0.7.0 2023-09-26T02:40:02,061 Compiling humantime v2.1.0 2023-09-26T02:40:02,652 Compiling ieee754 v0.2.6 2023-09-26T02:40:03,377 Compiling rustix v0.37.23 2023-09-26T02:40:05,668 Compiling termcolor v1.2.0 2023-09-26T02:40:05,802 Compiling portable-atomic v1.4.1 2023-09-26T02:40:09,383 Compiling hashbrown v0.12.3 2023-09-26T02:40:11,609 Compiling futures-sink v0.3.28 2023-09-26T02:40:11,889 Compiling parking_lot_core v0.9.8 2023-09-26T02:40:13,278 Compiling linear-map v1.2.0 2023-09-26T02:40:14,924 Compiling flume v0.10.14 2023-09-26T02:40:29,791 Compiling core_affinity v0.8.0 2023-09-26T02:40:30,543 Compiling enum-map-derive v0.6.0 2023-09-26T02:40:34,011 Compiling nalgebra v0.29.0 2023-09-26T02:40:37,542 Compiling csv-core v0.1.10 2023-09-26T02:40:41,579 Compiling atty v0.2.14 2023-09-26T02:40:41,854 Compiling tempfile v3.6.0 2023-09-26T02:40:42,146 Compiling smallvec v1.11.0 2023-09-26T02:40:42,909 Compiling bytes v1.4.0 2023-09-26T02:40:44,052 Compiling fixedbitset v0.4.2 2023-09-26T02:40:46,960 Compiling bitflags v1.3.2 2023-09-26T02:40:47,148 Compiling ryu v1.0.15 2023-09-26T02:40:49,623 Compiling bit-vec v0.6.3 2023-09-26T02:40:51,528 Compiling itoa v1.0.9 2023-09-26T02:40:51,726 Compiling linux-raw-sys v0.3.8 2023-09-26T02:40:52,322 Compiling unicode-width v0.1.10 2023-09-26T02:40:52,685 Compiling console v0.15.7 2023-09-26T02:41:08,325 Compiling csv v1.2.2 2023-09-26T02:41:19,267 Compiling bit-set v0.5.3 2023-09-26T02:41:20,317 Compiling petgraph v0.6.3 2023-09-26T02:41:38,627 Compiling env_logger v0.9.3 2023-09-26T02:41:43,510 Compiling enum-map v1.1.1 2023-09-26T02:41:55,887 Compiling rayon v1.7.0 2023-09-26T02:42:01,638 Compiling getset v0.1.2 2023-09-26T02:42:12,707 Compiling colored v2.0.4 2023-09-26T02:42:18,880 Compiling statrs v0.16.0 2023-09-26T02:42:19,872 Compiling niffler v2.5.0 2023-09-26T02:42:26,116 Compiling ndarray v0.15.6 2023-09-26T02:42:35,722 Compiling multimap v0.8.3 2023-09-26T02:42:37,030 Compiling vec_map v0.8.2 2023-09-26T02:42:38,568 Compiling pyo3 v0.19.1 2023-09-26T02:42:39,888 Compiling fxhash v0.2.1 2023-09-26T02:42:40,547 Compiling itertools-num v0.1.3 2023-09-26T02:42:40,938 Compiling ordered-float v3.7.0 2023-09-26T02:42:44,744 Compiling pyo3-macros-backend v0.19.1 2023-09-26T02:42:51,143 Compiling fibertools-rs v0.2.6 (/tmp/pip-wheel-gh6cs3or/pyft_a991e766d9ed48469e06181d6f5eeff7/local_dependencies/fibertools-rs) 2023-09-26T02:42:52,753 Compiling number_prefix v0.4.0 2023-09-26T02:42:53,456 Compiling editdistancek v1.0.2 2023-09-26T02:42:54,466 Compiling triple_accel v0.4.0 2023-09-26T02:43:03,366 Compiling strum v0.25.0 2023-09-26T02:43:03,738 Compiling bytecount v0.6.3 2023-09-26T02:43:04,557 Compiling fastrand v1.9.0 2023-09-26T02:43:15,545 Compiling bio v1.3.1 2023-09-26T02:43:17,475 Compiling indicatif v0.17.5 2023-09-26T02:43:25,827 Compiling pyo3-macros v0.19.1 2023-09-26T02:43:31,056 Compiling parking_lot v0.12.1 2023-09-26T02:43:47,457 Compiling unindent v0.1.11 2023-09-26T02:43:49,580 Compiling indoc v1.0.9 2023-09-26T02:43:53,557 Compiling anstyle v1.0.1 2023-09-26T02:43:55,937 Compiling env_logger v0.10.0 2023-09-26T02:45:52,280 Compiling libdeflater v0.12.0 2023-09-26T02:45:53,109 Compiling gzp v0.11.3 2023-09-26T02:46:45,218 Compiling rust-htslib v0.44.1 2023-09-26T02:46:46,994 error[E0308]: mismatched types 2023-09-26T02:46:46,996 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bam/record.rs:154:16 2023-09-26T02:46:46,998 | 2023-09-26T02:46:46,999 154 | l: sam_copy.len() as u64, 2023-09-26T02:46:47,001 | ^^^^^^^^^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-09-26T02:46:47,005 error[E0308]: mismatched types 2023-09-26T02:46:47,006 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bam/record.rs:155:16 2023-09-26T02:46:47,008 | 2023-09-26T02:46:47,010 155 | m: sam_copy.len() as u64, 2023-09-26T02:46:47,011 | ^^^^^^^^^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-09-26T02:46:47,400 error[E0308]: mismatched types 2023-09-26T02:46:47,401 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bam/record.rs:2324:17 2023-09-26T02:46:47,402 | 2023-09-26T02:46:47,402 2319 | let ret = hts_sys::bam_mods_query_type( 2023-09-26T02:46:47,402 | ---------------------------- arguments to this function are incorrect 2023-09-26T02:46:47,403 ... 2023-09-26T02:46:47,403 2324 | &mut canonical, 2023-09-26T02:46:47,404 | ^^^^^^^^^^^^^^ expected `*mut u8`, found `&mut i8` 2023-09-26T02:46:47,404 | 2023-09-26T02:46:47,405 = note: expected raw pointer `*mut u8` 2023-09-26T02:46:47,406 found mutable reference `&mut i8` 2023-09-26T02:46:47,406 note: function defined here 2023-09-26T02:46:47,407 --> /tmp/pip-wheel-gh6cs3or/pyft_a991e766d9ed48469e06181d6f5eeff7/target/release/build/hts-sys-82bf3d2c8804e649/out/bindings.rs:9439:12 2023-09-26T02:46:47,407 | 2023-09-26T02:46:47,408 9439 | pub fn bam_mods_query_type( 2023-09-26T02:46:47,408 | ^^^^^^^^^^^^^^^^^^^ 2023-09-26T02:46:47,582 error[E0308]: mismatched types 2023-09-26T02:46:47,583 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bam/mod.rs:1128:29 2023-09-26T02:46:47,583 | 2023-09-26T02:46:47,584 1128 | (*rec).l_text = l_text as u64; 2023-09-26T02:46:47,584 | ------------- ^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-09-26T02:46:47,585 | | 2023-09-26T02:46:47,586 | expected due to the type of this binding 2023-09-26T02:46:47,625 error[E0308]: mismatched types 2023-09-26T02:46:47,626 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bam/mod.rs:1393:45 2023-09-26T02:46:47,627 | 2023-09-26T02:46:47,628 1393 | let rec = htslib::sam_hdr_parse((l_text + 1) as u64, text as *const c_char); 2023-09-26T02:46:47,628 | --------------------- ^^^^^^^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-09-26T02:46:47,629 | | 2023-09-26T02:46:47,630 | arguments to this function are incorrect 2023-09-26T02:46:47,630 | 2023-09-26T02:46:47,631 note: function defined here 2023-09-26T02:46:47,631 --> /tmp/pip-wheel-gh6cs3or/pyft_a991e766d9ed48469e06181d6f5eeff7/target/release/build/hts-sys-82bf3d2c8804e649/out/bindings.rs:8520:12 2023-09-26T02:46:47,632 | 2023-09-26T02:46:47,633 8520 | pub fn sam_hdr_parse(l_text: size_t, text: *const ::std::os::raw::c_char) -> *mut sam_hdr_t; 2023-09-26T02:46:47,634 | ^^^^^^^^^^^^^ 2023-09-26T02:46:47,634 help: you can convert a `u64` to a `u32` and panic if the converted value doesn't fit 2023-09-26T02:46:47,635 | 2023-09-26T02:46:47,635 1393 | let rec = htslib::sam_hdr_parse(((l_text + 1) as u64).try_into().unwrap(), text as *const c_char); 2023-09-26T02:46:47,636 | + +++++++++++++++++++++ 2023-09-26T02:46:47,639 error[E0308]: mismatched types 2023-09-26T02:46:47,640 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bam/mod.rs:1395:29 2023-09-26T02:46:47,640 | 2023-09-26T02:46:47,641 1395 | (*rec).l_text = l_text as u64; 2023-09-26T02:46:47,642 | ------------- ^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-09-26T02:46:47,642 | | 2023-09-26T02:46:47,643 | expected due to the type of this binding 2023-09-26T02:46:47,886 error[E0308]: mismatched types 2023-09-26T02:46:47,887 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bcf/record.rs:1011:48 2023-09-26T02:46:47,887 | 2023-09-26T02:46:47,888 1011 | let rm_set = unsafe { htslib::kbs_init(remove.len() as u64) }; 2023-09-26T02:46:47,889 | ---------------- ^^^^^^^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-09-26T02:46:47,889 | | 2023-09-26T02:46:47,890 | arguments to this function are incorrect 2023-09-26T02:46:47,891 | 2023-09-26T02:46:47,891 note: function defined here 2023-09-26T02:46:47,892 --> /tmp/pip-wheel-gh6cs3or/pyft_a991e766d9ed48469e06181d6f5eeff7/target/release/build/hts-sys-82bf3d2c8804e649/out/bindings.rs:11642:12 2023-09-26T02:46:47,892 | 2023-09-26T02:46:47,893 11642 | pub fn kbs_init(ni: size_t) -> *mut kbitset_t; 2023-09-26T02:46:47,893 | ^^^^^^^^ 2023-09-26T02:46:47,894 help: you can convert a `u64` to a `u32` and panic if the converted value doesn't fit 2023-09-26T02:46:47,895 | 2023-09-26T02:46:47,895 1011 | let rm_set = unsafe { htslib::kbs_init((remove.len() as u64).try_into().unwrap()) }; 2023-09-26T02:46:47,896 | + +++++++++++++++++++++ 2023-09-26T02:46:48,119 error[E0308]: mismatched types 2023-09-26T02:46:48,120 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bgzf/mod.rs:118:17 2023-09-26T02:46:48,120 | 2023-09-26T02:46:48,121 115 | htslib::bgzf_read( 2023-09-26T02:46:48,121 | ----------------- arguments to this function are incorrect 2023-09-26T02:46:48,122 ... 2023-09-26T02:46:48,123 118 | buf.len() as u64, 2023-09-26T02:46:48,123 | ^^^^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-09-26T02:46:48,124 | 2023-09-26T02:46:48,125 note: function defined here 2023-09-26T02:46:48,126 --> /tmp/pip-wheel-gh6cs3or/pyft_a991e766d9ed48469e06181d6f5eeff7/target/release/build/hts-sys-82bf3d2c8804e649/out/bindings.rs:10097:12 2023-09-26T02:46:48,127 | 2023-09-26T02:46:48,127 10097 | pub fn bgzf_read(fp: *mut BGZF, data: *mut ::std::os::raw::c_void, length: size_t) -> ssize_t; 2023-09-26T02:46:48,128 | ^^^^^^^^^ 2023-09-26T02:46:48,129 help: you can convert a `u64` to a `u32` and panic if the converted value doesn't fit 2023-09-26T02:46:48,130 | 2023-09-26T02:46:48,131 118 | (buf.len() as u64).try_into().unwrap(), 2023-09-26T02:46:48,131 | + +++++++++++++++++++++ 2023-09-26T02:46:48,151 error[E0308]: mismatched types 2023-09-26T02:46:48,152 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bgzf/mod.rs:264:17 2023-09-26T02:46:48,153 | 2023-09-26T02:46:48,153 261 | htslib::bgzf_write( 2023-09-26T02:46:48,154 | ------------------ arguments to this function are incorrect 2023-09-26T02:46:48,155 ... 2023-09-26T02:46:48,155 264 | buf.len() as u64, 2023-09-26T02:46:48,156 | ^^^^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-09-26T02:46:48,156 | 2023-09-26T02:46:48,157 note: function defined here 2023-09-26T02:46:48,158 --> /tmp/pip-wheel-gh6cs3or/pyft_a991e766d9ed48469e06181d6f5eeff7/target/release/build/hts-sys-82bf3d2c8804e649/out/bindings.rs:10100:12 2023-09-26T02:46:48,158 | 2023-09-26T02:46:48,159 10100 | pub fn bgzf_write( 2023-09-26T02:46:48,160 | ^^^^^^^^^^ 2023-09-26T02:46:48,161 help: you can convert a `u64` to a `u32` and panic if the converted value doesn't fit 2023-09-26T02:46:48,161 | 2023-09-26T02:46:48,162 264 | (buf.len() as u64).try_into().unwrap(), 2023-09-26T02:46:48,163 | + +++++++++++++++++++++ 2023-09-26T02:46:48,340 For more information about this error, try `rustc --explain E0308`. 2023-09-26T02:46:48,354 error: could not compile `rust-htslib` (lib) due to 9 previous errors 2023-09-26T02:46:48,376 💥 maturin failed 2023-09-26T02:46:48,377 Caused by: Failed to build a native library through cargo 2023-09-26T02:46:48,378 Caused by: Cargo build finished with "exit status: 101": `"cargo" "rustc" "--features" "pyo3/extension-module" "--message-format" "json-render-diagnostics" "--manifest-path" "/tmp/pip-wheel-gh6cs3or/pyft_a991e766d9ed48469e06181d6f5eeff7/Cargo.toml" "--release" "--lib"` 2023-09-26T02:46:48,378 Error: command ['maturin', 'pep517', 'build-wheel', '-i', '/usr/bin/python3', '--compatibility', 'off'] returned non-zero exit status 1 2023-09-26T02:46:48,402 ERROR: [present-rich] Building wheel for pyft (pyproject.toml) exited with 1 2023-09-26T02:46:48,415 [bold magenta]full command[/]: [blue]/usr/bin/python3 /usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py build_wheel /tmp/tmpun1fwaqp[/] 2023-09-26T02:46:48,416 [bold magenta]cwd[/]: /tmp/pip-wheel-gh6cs3or/pyft_a991e766d9ed48469e06181d6f5eeff7 2023-09-26T02:46:48,416 Building wheel for pyft (pyproject.toml): finished with status 'error' 2023-09-26T02:46:48,418 ERROR: Failed building wheel for pyft 2023-09-26T02:46:48,421 Failed to build pyft 2023-09-26T02:46:48,422 ERROR: Failed to build one or more wheels 2023-09-26T02:46:48,423 Exception information: 2023-09-26T02:46:48,423 Traceback (most recent call last): 2023-09-26T02:46:48,423 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper 2023-09-26T02:46:48,423 status = run_func(*args) 2023-09-26T02:46:48,423 ^^^^^^^^^^^^^^^ 2023-09-26T02:46:48,423 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper 2023-09-26T02:46:48,423 return func(self, options, args) 2023-09-26T02:46:48,423 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-26T02:46:48,423 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 181, in run 2023-09-26T02:46:48,423 raise CommandError("Failed to build one or more wheels") 2023-09-26T02:46:48,423 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2023-09-26T02:46:48,428 Removed build tracker: '/tmp/pip-build-tracker-2lvoko8x'