2023-09-26T12:29:02,069 Created temporary directory: /tmp/pip-build-tracker-wqe732i0 2023-09-26T12:29:02,070 Initialized build tracking at /tmp/pip-build-tracker-wqe732i0 2023-09-26T12:29:02,071 Created build tracker: /tmp/pip-build-tracker-wqe732i0 2023-09-26T12:29:02,071 Entered build tracker: /tmp/pip-build-tracker-wqe732i0 2023-09-26T12:29:02,072 Created temporary directory: /tmp/pip-wheel-taizoeii 2023-09-26T12:29:02,075 Created temporary directory: /tmp/pip-ephem-wheel-cache-9_w2vz_s 2023-09-26T12:29:02,104 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-26T12:29:02,108 2 location(s) to search for versions of scikit-bio: 2023-09-26T12:29:02,108 * https://pypi.org/simple/scikit-bio/ 2023-09-26T12:29:02,108 * https://www.piwheels.org/simple/scikit-bio/ 2023-09-26T12:29:02,109 Fetching project page and analyzing links: https://pypi.org/simple/scikit-bio/ 2023-09-26T12:29:02,109 Getting page https://pypi.org/simple/scikit-bio/ 2023-09-26T12:29:02,111 Found index url https://pypi.org/simple/ 2023-09-26T12:29:02,327 Fetched page https://pypi.org/simple/scikit-bio/ as application/vnd.pypi.simple.v1+json 2023-09-26T12:29:02,332 Found link https://files.pythonhosted.org/packages/e0/4f/9e53704ce04a5e60511449a5e16511c6e20219ed0932e4aeea84fe2189fd/scikit-bio-0.1.0.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.0 2023-09-26T12:29:02,333 Found link https://files.pythonhosted.org/packages/91/8b/ea20137d6b84808b3dd6a7ad162dd80dcda40934428824d1ce87b8983b81/scikit-bio-0.1.1.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.1 2023-09-26T12:29:02,334 Found link https://files.pythonhosted.org/packages/5f/6e/adc704fa25e9789bfc17882261010320ea9c6148d9d2e28083a5e57a3e9f/scikit-bio-0.1.2.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.2 2023-09-26T12:29:02,334 Found link https://files.pythonhosted.org/packages/da/03/82ad31dc38265135b432b34b2cec0680fee841e0bdc5f90b5a4596beafb3/scikit-bio-0.1.3.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.3 2023-09-26T12:29:02,335 Found link https://files.pythonhosted.org/packages/b0/70/92b5bb9fc66ef4d54e1bf67626bda04a41ed723b5eb25c018154728e2b26/scikit-bio-0.1.4.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.4 2023-09-26T12:29:02,336 Found link https://files.pythonhosted.org/packages/5f/21/c6879978a222a04f1ac1b0a535a18111c84367ee22a5c93e6c0503f57e01/scikit-bio-0.1.5.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.5 2023-09-26T12:29:02,336 Found link https://files.pythonhosted.org/packages/99/76/0c0bd2d6d9973a001477535c68772ff35f543324e36afe21c4f7d6721327/scikit-bio-0.2.0.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.2.0 2023-09-26T12:29:02,337 Found link https://files.pythonhosted.org/packages/7b/74/77cf9b45ea0df4d3b8c3adcbd6f59e0b0603d1a3a2fed1b1ae6365232ac6/scikit-bio-0.2.1.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.2.1 2023-09-26T12:29:02,338 Found link https://files.pythonhosted.org/packages/bd/0a/6a5906fd53616c0763c5f445b5dc42907720f344318a1f07627986d22f33/scikit-bio-0.2.2.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.2.2 2023-09-26T12:29:02,338 Found link https://files.pythonhosted.org/packages/8e/70/559566c9dbde9435360058c420a819b4e8ce844f7ebd94daec9836f4be24/scikit-bio-0.2.3.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.2.3 2023-09-26T12:29:02,339 Found link https://files.pythonhosted.org/packages/d9/cb/c4684ce5c521de96411c2b88255feb45077e0b2df7ebbdf946abe5caaf25/scikit-bio-0.4.0.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.4.0 2023-09-26T12:29:02,340 Found link https://files.pythonhosted.org/packages/12/02/81edd2941d892cb4d0144be716c341b9a6fd255046c08d1b7bd6c70a0112/scikit-bio-0.4.1.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.4.1 2023-09-26T12:29:02,340 Found link https://files.pythonhosted.org/packages/a8/87/23635a6a9b6a1abdf78ccfc1e71929570be4c4ab4004eab66da9dd4a5c6a/scikit-bio-0.4.2.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.4.2 2023-09-26T12:29:02,341 Found link https://files.pythonhosted.org/packages/95/60/f4c269a6dfaf9d027adba6a81497e5d238cf5e604f53206b4ea50ed1145f/scikit-bio-0.5.0.zip (from https://pypi.org/simple/scikit-bio/), version: 0.5.0 2023-09-26T12:29:02,342 Found link https://files.pythonhosted.org/packages/e5/7e/cf03a7e53da18ae6a847894384838e9a36a98b48909a3f347ff6077c7304/scikit-bio-0.5.1.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.1 2023-09-26T12:29:02,342 Found link https://files.pythonhosted.org/packages/98/ee/08995b89efccf2bf8a0307a1eb7825dceb199e64a3db24cec832c0ca0baf/scikit-bio-0.5.2.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.2 2023-09-26T12:29:02,343 Found link https://files.pythonhosted.org/packages/39/07/4e3bcf7a7c254154ac445684d5f646ccc4a6ce6bfc3b0cc8030136215b8a/scikit-bio-0.5.3.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.3 2023-09-26T12:29:02,344 Found link https://files.pythonhosted.org/packages/ed/e0/3ae790c5c260be0968a6d41108e35f327365e5460c9d8672714fd136817d/scikit-bio-0.5.4.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.4 2023-09-26T12:29:02,344 Found link https://files.pythonhosted.org/packages/2d/ff/3a909ae8c212305846f7e87f86f3902408b55b958eccedf5d4349e76c671/scikit-bio-0.5.5.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.5 2023-09-26T12:29:02,345 Found link https://files.pythonhosted.org/packages/66/b0/054ef21e024d24422882958072973cd192b492e004a3ce4e9614ef173d9b/scikit-bio-0.5.6.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.6 2023-09-26T12:29:02,345 Found link https://files.pythonhosted.org/packages/8c/a4/6ec875ba9a56f7705529aecc745ca3eaee6d90b87cd103281be7a032b412/scikit-bio-0.5.7.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.7 2023-09-26T12:29:02,346 Found link https://files.pythonhosted.org/packages/f3/5b/7ae2c3cca0cee7825a24b9c68d7ba0893ef816c41e43aeccf9ca3bc63cb7/scikit-bio-0.5.8.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.8 2023-09-26T12:29:02,346 Found link https://files.pythonhosted.org/packages/0b/ff/c3ed458b9c7b1cfdaadfcab2e015f3e21672bd57a8e216a319442e4c8a1b/scikit-bio-0.5.9.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.9 2023-09-26T12:29:02,347 Fetching project page and analyzing links: https://www.piwheels.org/simple/scikit-bio/ 2023-09-26T12:29:02,348 Getting page https://www.piwheels.org/simple/scikit-bio/ 2023-09-26T12:29:02,349 Found index url https://www.piwheels.org/simple/ 2023-09-26T12:29:02,504 Fetched page https://www.piwheels.org/simple/scikit-bio/ as text/html 2023-09-26T12:29:02,509 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.9-cp39-cp39-linux_armv7l.whl#sha256=b248a90a5ed7214267889ad197585aa84aeb5ec25dd9bb63ddc064cbda00a971 (from https://www.piwheels.org/simple/scikit-bio/) 2023-09-26T12:29:02,509 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.9-cp39-cp39-linux_armv6l.whl#sha256=b248a90a5ed7214267889ad197585aa84aeb5ec25dd9bb63ddc064cbda00a971 (from https://www.piwheels.org/simple/scikit-bio/) 2023-09-26T12:29:02,510 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.9-cp37-cp37m-linux_armv7l.whl#sha256=8fa99b56c44c5c2b18355ef926d00cf7d1d651ab8d0eb367747d3806c4e716dc (from https://www.piwheels.org/simple/scikit-bio/) 2023-09-26T12:29:02,511 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.9-cp37-cp37m-linux_armv6l.whl#sha256=8fa99b56c44c5c2b18355ef926d00cf7d1d651ab8d0eb367747d3806c4e716dc (from https://www.piwheels.org/simple/scikit-bio/) 2023-09-26T12:29:02,511 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.8-cp39-cp39-linux_armv7l.whl#sha256=7692ae74dbd1b55f55796326c6f3ed2e17028eee9e09eecb0f58d7073e534c52 (from https://www.piwheels.org/simple/scikit-bio/) 2023-09-26T12:29:02,512 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.8-cp39-cp39-linux_armv6l.whl#sha256=7692ae74dbd1b55f55796326c6f3ed2e17028eee9e09eecb0f58d7073e534c52 (from https://www.piwheels.org/simple/scikit-bio/) 2023-09-26T12:29:02,512 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.8-cp37-cp37m-linux_armv7l.whl#sha256=6569ab2696b41bc41ae4e94547d0acd136512dab7753942df12b06931a5ed810 (from https://www.piwheels.org/simple/scikit-bio/) 2023-09-26T12:29:02,513 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.8-cp37-cp37m-linux_armv6l.whl#sha256=6569ab2696b41bc41ae4e94547d0acd136512dab7753942df12b06931a5ed810 (from https://www.piwheels.org/simple/scikit-bio/) 2023-09-26T12:29:02,514 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp39-cp39-linux_armv7l.whl#sha256=1fc89935500ef73303aef4292735583d83456271b51534e31497a2d5eb2b8d3b (from https://www.piwheels.org/simple/scikit-bio/) 2023-09-26T12:29:02,514 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp39-cp39-linux_armv6l.whl#sha256=1fc89935500ef73303aef4292735583d83456271b51534e31497a2d5eb2b8d3b (from https://www.piwheels.org/simple/scikit-bio/) 2023-09-26T12:29:02,515 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp37-cp37m-linux_armv7l.whl#sha256=fb1f612aaab958a170d467b2c9a6c1c6c2249bce52c095b7d7b7d8cc07c9ce31 (from https://www.piwheels.org/simple/scikit-bio/) 2023-09-26T12:29:02,515 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp37-cp37m-linux_armv6l.whl#sha256=fb1f612aaab958a170d467b2c9a6c1c6c2249bce52c095b7d7b7d8cc07c9ce31 (from https://www.piwheels.org/simple/scikit-bio/) 2023-09-26T12:29:02,515 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp35-cp35m-linux_armv7l.whl#sha256=3527865d97cf75cd55785b872d6e479bc2ee03250f6b71b9cc2d4a819d69c64c (from https://www.piwheels.org/simple/scikit-bio/) 2023-09-26T12:29:02,516 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp35-cp35m-linux_armv6l.whl#sha256=3527865d97cf75cd55785b872d6e479bc2ee03250f6b71b9cc2d4a819d69c64c (from https://www.piwheels.org/simple/scikit-bio/) 2023-09-26T12:29:02,517 Skipping link: not a file: https://www.piwheels.org/simple/scikit-bio/ 2023-09-26T12:29:02,518 Skipping link: not a file: https://pypi.org/simple/scikit-bio/ 2023-09-26T12:29:02,538 Given no hashes to check 1 links for project 'scikit-bio': discarding no candidates 2023-09-26T12:29:02,557 Collecting scikit-bio==0.5.9 2023-09-26T12:29:02,559 Created temporary directory: /tmp/pip-unpack-sji3qe_3 2023-09-26T12:29:02,696 Downloading scikit-bio-0.5.9.tar.gz (3.5 MB) 2023-09-26T12:29:04,564 Added scikit-bio==0.5.9 from https://files.pythonhosted.org/packages/0b/ff/c3ed458b9c7b1cfdaadfcab2e015f3e21672bd57a8e216a319442e4c8a1b/scikit-bio-0.5.9.tar.gz to build tracker '/tmp/pip-build-tracker-wqe732i0' 2023-09-26T12:29:04,570 Created temporary directory: /tmp/pip-build-env-sso_sb5z 2023-09-26T12:29:04,574 Installing build dependencies: started 2023-09-26T12:29:04,578 Running command pip subprocess to install build dependencies 2023-09-26T12:29:05,694 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-09-26T12:29:06,180 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-26T12:29:07,862 Collecting Cython>=0.29.32 2023-09-26T12:29:07,863 Obtaining dependency information for Cython>=0.29.32 from https://files.pythonhosted.org/packages/03/e9/9cc0c4f0d8a566089d096254cd25168a0db02dd047863a7f995d8d3eefa7/Cython-3.0.2-py2.py3-none-any.whl.metadata 2023-09-26T12:29:07,869 Using cached Cython-3.0.2-py2.py3-none-any.whl.metadata (3.1 kB) 2023-09-26T12:29:07,987 Collecting oldest-supported-numpy 2023-09-26T12:29:08,003 Using cached https://www.piwheels.org/simple/oldest-supported-numpy/oldest_supported_numpy-2023.8.3-py3-none-any.whl (4.8 kB) 2023-09-26T12:29:09,244 Collecting setuptools 2023-09-26T12:29:09,245 Obtaining dependency information for setuptools from https://files.pythonhosted.org/packages/bb/26/7945080113158354380a12ce26873dd6c1ebd88d47f5bc24e2c5bb38c16a/setuptools-68.2.2-py3-none-any.whl.metadata 2023-09-26T12:29:09,250 Using cached setuptools-68.2.2-py3-none-any.whl.metadata (6.3 kB) 2023-09-26T12:29:09,467 Collecting wheel 2023-09-26T12:29:09,482 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB) 2023-09-26T12:29:10,458 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/3a/be/650f9c091ef71cb01d735775d554e068752d3ff63d7943b26316dc401749/numpy-1.21.2.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2023-09-26T12:29:10,466 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/5f/d6/ad58ded26556eaeaa8c971e08b6466f17c4ac4d786cd3d800e26ce59cc01/numpy-1.21.3.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2023-09-26T12:29:10,473 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/fb/48/b0708ebd7718a8933f0d3937513ef8ef2f4f04529f1f66ca86d873043921/numpy-1.21.4.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2023-09-26T12:29:10,480 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/c2/a8/a924a09492bdfee8c2ec3094d0a13f2799800b4fdc9c890738aeeb12c72e/numpy-1.21.5.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2023-09-26T12:29:10,487 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/45/b7/de7b8e67f2232c26af57c205aaad29fe17754f793404f59c8a730c7a191a/numpy-1.21.6.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2023-09-26T12:29:10,873 Collecting numpy==1.23.2 (from oldest-supported-numpy) 2023-09-26T12:29:11,822 Using cached https://www.piwheels.org/simple/numpy/numpy-1.23.2-cp311-cp311-linux_armv7l.whl (12.4 MB) 2023-09-26T12:29:12,397 Using cached Cython-3.0.2-py2.py3-none-any.whl (1.2 MB) 2023-09-26T12:29:12,437 Using cached setuptools-68.2.2-py3-none-any.whl (807 kB) 2023-09-26T12:29:15,052 Installing collected packages: wheel, setuptools, numpy, Cython, oldest-supported-numpy 2023-09-26T12:29:15,271 Creating /tmp/pip-build-env-sso_sb5z/overlay/local/bin 2023-09-26T12:29:15,273 changing mode of /tmp/pip-build-env-sso_sb5z/overlay/local/bin/wheel to 755 2023-09-26T12:29:25,934 changing mode of /tmp/pip-build-env-sso_sb5z/overlay/local/bin/f2py to 755 2023-09-26T12:29:25,936 changing mode of /tmp/pip-build-env-sso_sb5z/overlay/local/bin/f2py3 to 755 2023-09-26T12:29:25,938 changing mode of /tmp/pip-build-env-sso_sb5z/overlay/local/bin/f2py3.11 to 755 2023-09-26T12:29:28,684 changing mode of /tmp/pip-build-env-sso_sb5z/overlay/local/bin/cygdb to 755 2023-09-26T12:29:28,686 changing mode of /tmp/pip-build-env-sso_sb5z/overlay/local/bin/cython to 755 2023-09-26T12:29:28,688 changing mode of /tmp/pip-build-env-sso_sb5z/overlay/local/bin/cythonize to 755 2023-09-26T12:29:28,744 Successfully installed Cython-3.0.2 numpy-1.23.2 oldest-supported-numpy-2023.8.3 setuptools-68.2.2 wheel-0.41.2 2023-09-26T12:29:29,365 Installing build dependencies: finished with status 'done' 2023-09-26T12:29:29,378 Getting requirements to build wheel: started 2023-09-26T12:29:29,379 Running command Getting requirements to build wheel 2023-09-26T12:29:30,493 running egg_info 2023-09-26T12:29:30,498 writing scikit_bio.egg-info/PKG-INFO 2023-09-26T12:29:30,502 writing dependency_links to scikit_bio.egg-info/dependency_links.txt 2023-09-26T12:29:30,504 writing requirements to scikit_bio.egg-info/requires.txt 2023-09-26T12:29:30,505 writing top-level names to scikit_bio.egg-info/top_level.txt 2023-09-26T12:29:30,751 reading manifest file 'scikit_bio.egg-info/SOURCES.txt' 2023-09-26T12:29:30,774 reading manifest template 'MANIFEST.in' 2023-09-26T12:29:30,814 no previously-included directories found matching 'doc/build' 2023-09-26T12:29:30,816 no previously-included directories found matching 'doc/source/generated' 2023-09-26T12:29:30,821 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2023-09-26T12:29:30,826 warning: no previously-included files matching '*.pyo' found anywhere in distribution 2023-09-26T12:29:30,831 warning: no previously-included files matching '*.so' found anywhere in distribution 2023-09-26T12:29:30,835 warning: no previously-included files matching '.*.swp' found anywhere in distribution 2023-09-26T12:29:30,839 warning: no previously-included files matching '.coverage' found anywhere in distribution 2023-09-26T12:29:30,839 adding license file 'LICENSE.txt' 2023-09-26T12:29:30,877 writing manifest file 'scikit_bio.egg-info/SOURCES.txt' 2023-09-26T12:29:31,006 Getting requirements to build wheel: finished with status 'done' 2023-09-26T12:29:31,018 Created temporary directory: /tmp/pip-modern-metadata-mcss61jo 2023-09-26T12:29:31,020 Preparing metadata (pyproject.toml): started 2023-09-26T12:29:31,022 Running command Preparing metadata (pyproject.toml) 2023-09-26T12:29:31,741 running dist_info 2023-09-26T12:29:31,761 creating /tmp/pip-modern-metadata-mcss61jo/scikit_bio.egg-info 2023-09-26T12:29:31,766 writing /tmp/pip-modern-metadata-mcss61jo/scikit_bio.egg-info/PKG-INFO 2023-09-26T12:29:31,770 writing dependency_links to /tmp/pip-modern-metadata-mcss61jo/scikit_bio.egg-info/dependency_links.txt 2023-09-26T12:29:31,771 writing requirements to /tmp/pip-modern-metadata-mcss61jo/scikit_bio.egg-info/requires.txt 2023-09-26T12:29:31,772 writing top-level names to /tmp/pip-modern-metadata-mcss61jo/scikit_bio.egg-info/top_level.txt 2023-09-26T12:29:31,774 writing manifest file '/tmp/pip-modern-metadata-mcss61jo/scikit_bio.egg-info/SOURCES.txt' 2023-09-26T12:29:32,004 reading manifest file '/tmp/pip-modern-metadata-mcss61jo/scikit_bio.egg-info/SOURCES.txt' 2023-09-26T12:29:32,006 reading manifest template 'MANIFEST.in' 2023-09-26T12:29:32,044 no previously-included directories found matching 'doc/build' 2023-09-26T12:29:32,045 no previously-included directories found matching 'doc/source/generated' 2023-09-26T12:29:32,048 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2023-09-26T12:29:32,052 warning: no previously-included files matching '*.pyo' found anywhere in distribution 2023-09-26T12:29:32,055 warning: no previously-included files matching '*.so' found anywhere in distribution 2023-09-26T12:29:32,058 warning: no previously-included files matching '.*.swp' found anywhere in distribution 2023-09-26T12:29:32,061 warning: no previously-included files matching '.coverage' found anywhere in distribution 2023-09-26T12:29:32,061 adding license file 'LICENSE.txt' 2023-09-26T12:29:32,091 writing manifest file '/tmp/pip-modern-metadata-mcss61jo/scikit_bio.egg-info/SOURCES.txt' 2023-09-26T12:29:32,093 creating '/tmp/pip-modern-metadata-mcss61jo/scikit_bio-0.5.9.dist-info' 2023-09-26T12:29:32,297 Preparing metadata (pyproject.toml): finished with status 'done' 2023-09-26T12:29:32,302 Source in /tmp/pip-wheel-taizoeii/scikit-bio_e0da6028b1a14c97aee800431d4d73e4 has version 0.5.9, which satisfies requirement scikit-bio==0.5.9 from https://files.pythonhosted.org/packages/0b/ff/c3ed458b9c7b1cfdaadfcab2e015f3e21672bd57a8e216a319442e4c8a1b/scikit-bio-0.5.9.tar.gz 2023-09-26T12:29:32,303 Removed scikit-bio==0.5.9 from https://files.pythonhosted.org/packages/0b/ff/c3ed458b9c7b1cfdaadfcab2e015f3e21672bd57a8e216a319442e4c8a1b/scikit-bio-0.5.9.tar.gz from build tracker '/tmp/pip-build-tracker-wqe732i0' 2023-09-26T12:29:32,308 Created temporary directory: /tmp/pip-unpack-7lj1kefa 2023-09-26T12:29:32,309 Created temporary directory: /tmp/pip-unpack-ujkgh3ax 2023-09-26T12:29:32,323 Building wheels for collected packages: scikit-bio 2023-09-26T12:29:32,327 Created temporary directory: /tmp/pip-wheel-u2jwcf7s 2023-09-26T12:29:32,328 Destination directory: /tmp/pip-wheel-u2jwcf7s 2023-09-26T12:29:32,330 Building wheel for scikit-bio (pyproject.toml): started 2023-09-26T12:29:32,331 Running command Building wheel for scikit-bio (pyproject.toml) 2023-09-26T12:29:33,069 running bdist_wheel 2023-09-26T12:29:33,244 running build 2023-09-26T12:29:33,244 running build_py 2023-09-26T12:29:33,252 creating build 2023-09-26T12:29:33,253 creating build/lib.linux-armv7l-cpython-311 2023-09-26T12:29:33,253 creating build/lib.linux-armv7l-cpython-311/skbio 2023-09-26T12:29:33,255 copying skbio/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio 2023-09-26T12:29:33,257 copying skbio/workflow.py -> build/lib.linux-armv7l-cpython-311/skbio 2023-09-26T12:29:33,259 copying skbio/_base.py -> build/lib.linux-armv7l-cpython-311/skbio 2023-09-26T12:29:33,261 copying skbio/test.py -> build/lib.linux-armv7l-cpython-311/skbio 2023-09-26T12:29:33,263 creating build/lib.linux-armv7l-cpython-311/skbio/tree 2023-09-26T12:29:33,264 copying skbio/tree/_exception.py -> build/lib.linux-armv7l-cpython-311/skbio/tree 2023-09-26T12:29:33,265 copying skbio/tree/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio/tree 2023-09-26T12:29:33,267 copying skbio/tree/_nj.py -> build/lib.linux-armv7l-cpython-311/skbio/tree 2023-09-26T12:29:33,270 copying skbio/tree/_majority_rule.py -> build/lib.linux-armv7l-cpython-311/skbio/tree 2023-09-26T12:29:33,272 copying skbio/tree/_tree.py -> build/lib.linux-armv7l-cpython-311/skbio/tree 2023-09-26T12:29:33,276 creating build/lib.linux-armv7l-cpython-311/skbio/util 2023-09-26T12:29:33,277 copying skbio/util/_exception.py -> build/lib.linux-armv7l-cpython-311/skbio/util 2023-09-26T12:29:33,279 copying skbio/util/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio/util 2023-09-26T12:29:33,281 copying skbio/util/_warning.py -> build/lib.linux-armv7l-cpython-311/skbio/util 2023-09-26T12:29:33,282 copying skbio/util/_testing.py -> build/lib.linux-armv7l-cpython-311/skbio/util 2023-09-26T12:29:33,285 copying skbio/util/_misc.py -> build/lib.linux-armv7l-cpython-311/skbio/util 2023-09-26T12:29:33,287 copying skbio/util/_decorator.py -> build/lib.linux-armv7l-cpython-311/skbio/util 2023-09-26T12:29:33,289 creating build/lib.linux-armv7l-cpython-311/skbio/sequence 2023-09-26T12:29:33,290 copying skbio/sequence/_rna.py -> build/lib.linux-armv7l-cpython-311/skbio/sequence 2023-09-26T12:29:33,293 copying skbio/sequence/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio/sequence 2023-09-26T12:29:33,295 copying skbio/sequence/_genetic_code.py -> build/lib.linux-armv7l-cpython-311/skbio/sequence 2023-09-26T12:29:33,298 copying skbio/sequence/_nucleotide_mixin.py -> build/lib.linux-armv7l-cpython-311/skbio/sequence 2023-09-26T12:29:33,300 copying skbio/sequence/_dna.py -> build/lib.linux-armv7l-cpython-311/skbio/sequence 2023-09-26T12:29:33,302 copying skbio/sequence/_repr.py -> build/lib.linux-armv7l-cpython-311/skbio/sequence 2023-09-26T12:29:33,304 copying skbio/sequence/_sequence.py -> build/lib.linux-armv7l-cpython-311/skbio/sequence 2023-09-26T12:29:33,307 copying skbio/sequence/_grammared_sequence.py -> build/lib.linux-armv7l-cpython-311/skbio/sequence 2023-09-26T12:29:33,309 copying skbio/sequence/distance.py -> build/lib.linux-armv7l-cpython-311/skbio/sequence 2023-09-26T12:29:33,312 copying skbio/sequence/_protein.py -> build/lib.linux-armv7l-cpython-311/skbio/sequence 2023-09-26T12:29:33,314 creating build/lib.linux-armv7l-cpython-311/skbio/alignment 2023-09-26T12:29:33,315 copying skbio/alignment/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio/alignment 2023-09-26T12:29:33,318 copying skbio/alignment/_repr.py -> build/lib.linux-armv7l-cpython-311/skbio/alignment 2023-09-26T12:29:33,319 copying skbio/alignment/_tabular_msa.py -> build/lib.linux-armv7l-cpython-311/skbio/alignment 2023-09-26T12:29:33,323 copying skbio/alignment/_pairwise.py -> build/lib.linux-armv7l-cpython-311/skbio/alignment 2023-09-26T12:29:33,325 copying skbio/alignment/_indexing.py -> build/lib.linux-armv7l-cpython-311/skbio/alignment 2023-09-26T12:29:33,328 creating build/lib.linux-armv7l-cpython-311/skbio/metadata 2023-09-26T12:29:33,328 copying skbio/metadata/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio/metadata 2023-09-26T12:29:33,330 copying skbio/metadata/_repr.py -> build/lib.linux-armv7l-cpython-311/skbio/metadata 2023-09-26T12:29:33,332 copying skbio/metadata/_interval.py -> build/lib.linux-armv7l-cpython-311/skbio/metadata 2023-09-26T12:29:33,335 copying skbio/metadata/_testing.py -> build/lib.linux-armv7l-cpython-311/skbio/metadata 2023-09-26T12:29:33,337 copying skbio/metadata/_mixin.py -> build/lib.linux-armv7l-cpython-311/skbio/metadata 2023-09-26T12:29:33,340 creating build/lib.linux-armv7l-cpython-311/skbio/stats 2023-09-26T12:29:33,341 copying skbio/stats/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio/stats 2023-09-26T12:29:33,342 copying skbio/stats/power.py -> build/lib.linux-armv7l-cpython-311/skbio/stats 2023-09-26T12:29:33,345 copying skbio/stats/composition.py -> build/lib.linux-armv7l-cpython-311/skbio/stats 2023-09-26T12:29:33,348 copying skbio/stats/_subsample.py -> build/lib.linux-armv7l-cpython-311/skbio/stats 2023-09-26T12:29:33,350 copying skbio/stats/_misc.py -> build/lib.linux-armv7l-cpython-311/skbio/stats 2023-09-26T12:29:33,351 copying skbio/stats/gradient.py -> build/lib.linux-armv7l-cpython-311/skbio/stats 2023-09-26T12:29:33,354 creating build/lib.linux-armv7l-cpython-311/skbio/io 2023-09-26T12:29:33,355 copying skbio/io/_exception.py -> build/lib.linux-armv7l-cpython-311/skbio/io 2023-09-26T12:29:33,357 copying skbio/io/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio/io 2023-09-26T12:29:33,359 copying skbio/io/_warning.py -> build/lib.linux-armv7l-cpython-311/skbio/io 2023-09-26T12:29:33,361 copying skbio/io/_iosources.py -> build/lib.linux-armv7l-cpython-311/skbio/io 2023-09-26T12:29:33,363 copying skbio/io/util.py -> build/lib.linux-armv7l-cpython-311/skbio/io 2023-09-26T12:29:33,365 copying skbio/io/registry.py -> build/lib.linux-armv7l-cpython-311/skbio/io 2023-09-26T12:29:33,368 copying skbio/io/_fileobject.py -> build/lib.linux-armv7l-cpython-311/skbio/io 2023-09-26T12:29:33,370 creating build/lib.linux-armv7l-cpython-311/skbio/tests 2023-09-26T12:29:33,371 copying skbio/tests/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio/tests 2023-09-26T12:29:33,374 copying skbio/tests/test_base.py -> build/lib.linux-armv7l-cpython-311/skbio/tests 2023-09-26T12:29:33,375 copying skbio/tests/test_workflow.py -> build/lib.linux-armv7l-cpython-311/skbio/tests 2023-09-26T12:29:33,378 creating build/lib.linux-armv7l-cpython-311/skbio/diversity 2023-09-26T12:29:33,379 copying skbio/diversity/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio/diversity 2023-09-26T12:29:33,381 copying skbio/diversity/_block.py -> build/lib.linux-armv7l-cpython-311/skbio/diversity 2023-09-26T12:29:33,383 copying skbio/diversity/_driver.py -> build/lib.linux-armv7l-cpython-311/skbio/diversity 2023-09-26T12:29:33,386 copying skbio/diversity/_util.py -> build/lib.linux-armv7l-cpython-311/skbio/diversity 2023-09-26T12:29:33,388 creating build/lib.linux-armv7l-cpython-311/skbio/tree/tests 2023-09-26T12:29:33,389 copying skbio/tree/tests/test_nj.py -> build/lib.linux-armv7l-cpython-311/skbio/tree/tests 2023-09-26T12:29:33,392 copying skbio/tree/tests/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio/tree/tests 2023-09-26T12:29:33,393 copying skbio/tree/tests/test_tree.py -> build/lib.linux-armv7l-cpython-311/skbio/tree/tests 2023-09-26T12:29:33,396 copying skbio/tree/tests/test_majority_rule.py -> build/lib.linux-armv7l-cpython-311/skbio/tree/tests 2023-09-26T12:29:33,399 creating build/lib.linux-armv7l-cpython-311/skbio/util/tests 2023-09-26T12:29:33,400 copying skbio/util/tests/test_misc.py -> build/lib.linux-armv7l-cpython-311/skbio/util/tests 2023-09-26T12:29:33,402 copying skbio/util/tests/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio/util/tests 2023-09-26T12:29:33,403 copying skbio/util/tests/test_testing.py -> build/lib.linux-armv7l-cpython-311/skbio/util/tests 2023-09-26T12:29:33,405 copying skbio/util/tests/test_decorator.py -> build/lib.linux-armv7l-cpython-311/skbio/util/tests 2023-09-26T12:29:33,407 creating build/lib.linux-armv7l-cpython-311/skbio/sequence/tests 2023-09-26T12:29:33,408 copying skbio/sequence/tests/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio/sequence/tests 2023-09-26T12:29:33,410 copying skbio/sequence/tests/test_dna.py -> build/lib.linux-armv7l-cpython-311/skbio/sequence/tests 2023-09-26T12:29:33,411 copying skbio/sequence/tests/test_rna.py -> build/lib.linux-armv7l-cpython-311/skbio/sequence/tests 2023-09-26T12:29:33,413 copying skbio/sequence/tests/test_grammared_sequence.py -> build/lib.linux-armv7l-cpython-311/skbio/sequence/tests 2023-09-26T12:29:33,415 copying skbio/sequence/tests/test_protein.py -> build/lib.linux-armv7l-cpython-311/skbio/sequence/tests 2023-09-26T12:29:33,417 copying skbio/sequence/tests/test_nucleotide_sequences.py -> build/lib.linux-armv7l-cpython-311/skbio/sequence/tests 2023-09-26T12:29:33,420 copying skbio/sequence/tests/test_sequence.py -> build/lib.linux-armv7l-cpython-311/skbio/sequence/tests 2023-09-26T12:29:33,424 copying skbio/sequence/tests/test_genetic_code.py -> build/lib.linux-armv7l-cpython-311/skbio/sequence/tests 2023-09-26T12:29:33,426 copying skbio/sequence/tests/test_distance.py -> build/lib.linux-armv7l-cpython-311/skbio/sequence/tests 2023-09-26T12:29:33,429 creating build/lib.linux-armv7l-cpython-311/skbio/alignment/_lib 2023-09-26T12:29:33,430 copying skbio/alignment/_lib/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio/alignment/_lib 2023-09-26T12:29:33,432 creating build/lib.linux-armv7l-cpython-311/skbio/alignment/tests 2023-09-26T12:29:33,433 copying skbio/alignment/tests/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio/alignment/tests 2023-09-26T12:29:33,435 copying skbio/alignment/tests/test_ssw.py -> build/lib.linux-armv7l-cpython-311/skbio/alignment/tests 2023-09-26T12:29:33,437 copying skbio/alignment/tests/test_pairwise.py -> build/lib.linux-armv7l-cpython-311/skbio/alignment/tests 2023-09-26T12:29:33,440 copying skbio/alignment/tests/test_tabular_msa.py -> build/lib.linux-armv7l-cpython-311/skbio/alignment/tests 2023-09-26T12:29:33,445 creating build/lib.linux-armv7l-cpython-311/skbio/metadata/tests 2023-09-26T12:29:33,445 copying skbio/metadata/tests/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio/metadata/tests 2023-09-26T12:29:33,447 copying skbio/metadata/tests/test_intersection.py -> build/lib.linux-armv7l-cpython-311/skbio/metadata/tests 2023-09-26T12:29:33,449 copying skbio/metadata/tests/test_mixin.py -> build/lib.linux-armv7l-cpython-311/skbio/metadata/tests 2023-09-26T12:29:33,451 copying skbio/metadata/tests/test_interval.py -> build/lib.linux-armv7l-cpython-311/skbio/metadata/tests 2023-09-26T12:29:33,455 creating build/lib.linux-armv7l-cpython-311/skbio/stats/distance 2023-09-26T12:29:33,456 copying skbio/stats/distance/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance 2023-09-26T12:29:33,458 copying skbio/stats/distance/_bioenv.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance 2023-09-26T12:29:33,460 copying skbio/stats/distance/_base.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance 2023-09-26T12:29:33,463 copying skbio/stats/distance/_anosim.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance 2023-09-26T12:29:33,465 copying skbio/stats/distance/_utils.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance 2023-09-26T12:29:33,467 copying skbio/stats/distance/_permdisp.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance 2023-09-26T12:29:33,469 copying skbio/stats/distance/_mantel.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance 2023-09-26T12:29:33,472 copying skbio/stats/distance/_permanova.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance 2023-09-26T12:29:33,474 creating build/lib.linux-armv7l-cpython-311/skbio/stats/evolve 2023-09-26T12:29:33,475 copying skbio/stats/evolve/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/evolve 2023-09-26T12:29:33,476 copying skbio/stats/evolve/_hommola.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/evolve 2023-09-26T12:29:33,479 creating build/lib.linux-armv7l-cpython-311/skbio/stats/ordination 2023-09-26T12:29:33,480 copying skbio/stats/ordination/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination 2023-09-26T12:29:33,482 copying skbio/stats/ordination/_correspondence_analysis.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination 2023-09-26T12:29:33,483 copying skbio/stats/ordination/_canonical_correspondence_analysis.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination 2023-09-26T12:29:33,485 copying skbio/stats/ordination/_utils.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination 2023-09-26T12:29:33,487 copying skbio/stats/ordination/_redundancy_analysis.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination 2023-09-26T12:29:33,489 copying skbio/stats/ordination/_principal_coordinate_analysis.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination 2023-09-26T12:29:33,492 copying skbio/stats/ordination/_ordination_results.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination 2023-09-26T12:29:33,494 creating build/lib.linux-armv7l-cpython-311/skbio/stats/tests 2023-09-26T12:29:33,495 copying skbio/stats/tests/test_misc.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/tests 2023-09-26T12:29:33,497 copying skbio/stats/tests/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/tests 2023-09-26T12:29:33,499 copying skbio/stats/tests/test_composition.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/tests 2023-09-26T12:29:33,501 copying skbio/stats/tests/test_gradient.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/tests 2023-09-26T12:29:33,504 copying skbio/stats/tests/test_subsample.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/tests 2023-09-26T12:29:33,506 copying skbio/stats/tests/test_power.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/tests 2023-09-26T12:29:33,509 creating build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests 2023-09-26T12:29:33,510 copying skbio/stats/distance/tests/test_permanova.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests 2023-09-26T12:29:33,512 copying skbio/stats/distance/tests/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests 2023-09-26T12:29:33,514 copying skbio/stats/distance/tests/test_permdisp.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests 2023-09-26T12:29:33,516 copying skbio/stats/distance/tests/test_base.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests 2023-09-26T12:29:33,519 copying skbio/stats/distance/tests/test_anosim.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests 2023-09-26T12:29:33,521 copying skbio/stats/distance/tests/test_bioenv.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests 2023-09-26T12:29:33,523 copying skbio/stats/distance/tests/test_mantel.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests 2023-09-26T12:29:33,526 creating build/lib.linux-armv7l-cpython-311/skbio/stats/evolve/tests 2023-09-26T12:29:33,527 copying skbio/stats/evolve/tests/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/evolve/tests 2023-09-26T12:29:33,529 copying skbio/stats/evolve/tests/test_hommola.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/evolve/tests 2023-09-26T12:29:33,531 creating build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests 2023-09-26T12:29:33,532 copying skbio/stats/ordination/tests/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests 2023-09-26T12:29:33,534 copying skbio/stats/ordination/tests/test_correspondence_analysis.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests 2023-09-26T12:29:33,536 copying skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests 2023-09-26T12:29:33,538 copying skbio/stats/ordination/tests/test_principal_coordinate_analysis.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests 2023-09-26T12:29:33,540 copying skbio/stats/ordination/tests/test_redundancy_analysis.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests 2023-09-26T12:29:33,542 copying skbio/stats/ordination/tests/test_ordination_results.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests 2023-09-26T12:29:33,544 copying skbio/stats/ordination/tests/test_util.py -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests 2023-09-26T12:29:33,547 creating build/lib.linux-armv7l-cpython-311/skbio/io/format 2023-09-26T12:29:33,548 copying skbio/io/format/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format 2023-09-26T12:29:33,550 copying skbio/io/format/gff3.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format 2023-09-26T12:29:33,552 copying skbio/io/format/binary_dm.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format 2023-09-26T12:29:33,554 copying skbio/io/format/taxdump.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format 2023-09-26T12:29:33,556 copying skbio/io/format/ordination.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format 2023-09-26T12:29:33,558 copying skbio/io/format/_base.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format 2023-09-26T12:29:33,560 copying skbio/io/format/blast6.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format 2023-09-26T12:29:33,563 copying skbio/io/format/_sequence_feature_vocabulary.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format 2023-09-26T12:29:33,565 copying skbio/io/format/fasta.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format 2023-09-26T12:29:33,568 copying skbio/io/format/phylip.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format 2023-09-26T12:29:33,570 copying skbio/io/format/genbank.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format 2023-09-26T12:29:33,573 copying skbio/io/format/fastq.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format 2023-09-26T12:29:33,575 copying skbio/io/format/lsmat.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format 2023-09-26T12:29:33,577 copying skbio/io/format/newick.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format 2023-09-26T12:29:33,579 copying skbio/io/format/blast7.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format 2023-09-26T12:29:33,582 copying skbio/io/format/stockholm.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format 2023-09-26T12:29:33,584 copying skbio/io/format/clustal.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format 2023-09-26T12:29:33,586 copying skbio/io/format/_blast.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format 2023-09-26T12:29:33,588 copying skbio/io/format/embl.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format 2023-09-26T12:29:33,591 copying skbio/io/format/qseq.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format 2023-09-26T12:29:33,593 copying skbio/io/format/emptyfile.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format 2023-09-26T12:29:33,595 creating build/lib.linux-armv7l-cpython-311/skbio/io/tests 2023-09-26T12:29:33,596 copying skbio/io/tests/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio/io/tests 2023-09-26T12:29:33,598 copying skbio/io/tests/test_iosources.py -> build/lib.linux-armv7l-cpython-311/skbio/io/tests 2023-09-26T12:29:33,600 copying skbio/io/tests/test_registry.py -> build/lib.linux-armv7l-cpython-311/skbio/io/tests 2023-09-26T12:29:33,604 copying skbio/io/tests/test_util.py -> build/lib.linux-armv7l-cpython-311/skbio/io/tests 2023-09-26T12:29:33,607 creating build/lib.linux-armv7l-cpython-311/skbio/io/format/tests 2023-09-26T12:29:33,608 copying skbio/io/format/tests/test_clustal.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests 2023-09-26T12:29:33,611 copying skbio/io/format/tests/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests 2023-09-26T12:29:33,612 copying skbio/io/format/tests/test_lsmat.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests 2023-09-26T12:29:33,614 copying skbio/io/format/tests/test_genbank.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests 2023-09-26T12:29:33,616 copying skbio/io/format/tests/test_newick.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests 2023-09-26T12:29:33,619 copying skbio/io/format/tests/test_blast6.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests 2023-09-26T12:29:33,621 copying skbio/io/format/tests/test_taxdump.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests 2023-09-26T12:29:33,623 copying skbio/io/format/tests/test_stockholm.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests 2023-09-26T12:29:33,626 copying skbio/io/format/tests/test_fastq.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests 2023-09-26T12:29:33,628 copying skbio/io/format/tests/test_sequence_feature_vocabulary.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests 2023-09-26T12:29:33,630 copying skbio/io/format/tests/test_base.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests 2023-09-26T12:29:33,632 copying skbio/io/format/tests/test_gff3.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests 2023-09-26T12:29:33,635 copying skbio/io/format/tests/test_binary_dm.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests 2023-09-26T12:29:33,637 copying skbio/io/format/tests/test_fasta.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests 2023-09-26T12:29:33,639 copying skbio/io/format/tests/test_phylip.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests 2023-09-26T12:29:33,642 copying skbio/io/format/tests/test_ordination.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests 2023-09-26T12:29:33,644 copying skbio/io/format/tests/test_qseq.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests 2023-09-26T12:29:33,646 copying skbio/io/format/tests/test_emptyfile.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests 2023-09-26T12:29:33,648 copying skbio/io/format/tests/test_embl.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests 2023-09-26T12:29:33,650 copying skbio/io/format/tests/test_blast7.py -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests 2023-09-26T12:29:33,653 creating build/lib.linux-armv7l-cpython-311/skbio/diversity/beta 2023-09-26T12:29:33,654 copying skbio/diversity/beta/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio/diversity/beta 2023-09-26T12:29:33,656 copying skbio/diversity/beta/_unifrac.py -> build/lib.linux-armv7l-cpython-311/skbio/diversity/beta 2023-09-26T12:29:33,659 creating build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha 2023-09-26T12:29:33,660 copying skbio/diversity/alpha/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha 2023-09-26T12:29:33,661 copying skbio/diversity/alpha/_chao1.py -> build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha 2023-09-26T12:29:33,664 copying skbio/diversity/alpha/_faith_pd.py -> build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha 2023-09-26T12:29:33,666 copying skbio/diversity/alpha/_base.py -> build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha 2023-09-26T12:29:33,668 copying skbio/diversity/alpha/_lladser.py -> build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha 2023-09-26T12:29:33,670 copying skbio/diversity/alpha/_gini.py -> build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha 2023-09-26T12:29:33,672 copying skbio/diversity/alpha/_ace.py -> build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha 2023-09-26T12:29:33,675 creating build/lib.linux-armv7l-cpython-311/skbio/diversity/tests 2023-09-26T12:29:33,676 copying skbio/diversity/tests/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio/diversity/tests 2023-09-26T12:29:33,677 copying skbio/diversity/tests/test_block.py -> build/lib.linux-armv7l-cpython-311/skbio/diversity/tests 2023-09-26T12:29:33,679 copying skbio/diversity/tests/test_util.py -> build/lib.linux-armv7l-cpython-311/skbio/diversity/tests 2023-09-26T12:29:33,681 copying skbio/diversity/tests/test_driver.py -> build/lib.linux-armv7l-cpython-311/skbio/diversity/tests 2023-09-26T12:29:33,685 creating build/lib.linux-armv7l-cpython-311/skbio/diversity/beta/tests 2023-09-26T12:29:33,685 copying skbio/diversity/beta/tests/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio/diversity/beta/tests 2023-09-26T12:29:33,687 copying skbio/diversity/beta/tests/test_unifrac.py -> build/lib.linux-armv7l-cpython-311/skbio/diversity/beta/tests 2023-09-26T12:29:33,690 creating build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/tests 2023-09-26T12:29:33,691 copying skbio/diversity/alpha/tests/__init__.py -> build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/tests 2023-09-26T12:29:33,693 copying skbio/diversity/alpha/tests/test_gini.py -> build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/tests 2023-09-26T12:29:33,694 copying skbio/diversity/alpha/tests/test_chao1.py -> build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/tests 2023-09-26T12:29:33,696 copying skbio/diversity/alpha/tests/test_lladser.py -> build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/tests 2023-09-26T12:29:33,698 copying skbio/diversity/alpha/tests/test_base.py -> build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/tests 2023-09-26T12:29:33,700 copying skbio/diversity/alpha/tests/test_faith_pd.py -> build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/tests 2023-09-26T12:29:33,702 copying skbio/diversity/alpha/tests/test_ace.py -> build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/tests 2023-09-26T12:29:33,735 creating build/lib.linux-armv7l-cpython-311/skbio/stats/tests/data 2023-09-26T12:29:33,735 copying skbio/stats/tests/data/vr_raw -> build/lib.linux-armv7l-cpython-311/skbio/stats/tests/data 2023-09-26T12:29:33,737 copying skbio/stats/tests/data/vr_real_raw -> build/lib.linux-armv7l-cpython-311/skbio/stats/tests/data 2023-09-26T12:29:33,739 copying skbio/stats/tests/data/cr_no_data_raw -> build/lib.linux-armv7l-cpython-311/skbio/stats/tests/data 2023-09-26T12:29:33,741 copying skbio/stats/tests/data/cr_data_out -> build/lib.linux-armv7l-cpython-311/skbio/stats/tests/data 2023-09-26T12:29:33,743 copying skbio/stats/tests/data/gr_wo_msg_out -> build/lib.linux-armv7l-cpython-311/skbio/stats/tests/data 2023-09-26T12:29:33,745 copying skbio/stats/tests/data/gr_w_msg_raw -> build/lib.linux-armv7l-cpython-311/skbio/stats/tests/data 2023-09-26T12:29:33,747 copying skbio/stats/tests/data/gr_wo_msg_raw -> build/lib.linux-armv7l-cpython-311/skbio/stats/tests/data 2023-09-26T12:29:33,749 copying skbio/stats/tests/data/vr_real_out -> build/lib.linux-armv7l-cpython-311/skbio/stats/tests/data 2023-09-26T12:29:33,750 copying skbio/stats/tests/data/gr_w_msg_out -> build/lib.linux-armv7l-cpython-311/skbio/stats/tests/data 2023-09-26T12:29:33,752 copying skbio/stats/tests/data/cr_data_raw -> build/lib.linux-armv7l-cpython-311/skbio/stats/tests/data 2023-09-26T12:29:33,754 copying skbio/stats/tests/data/cr_no_data_out -> build/lib.linux-armv7l-cpython-311/skbio/stats/tests/data 2023-09-26T12:29:33,757 copying skbio/stats/tests/data/vr_out -> build/lib.linux-armv7l-cpython-311/skbio/stats/tests/data 2023-09-26T12:29:33,759 creating build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data 2023-09-26T12:29:33,760 copying skbio/stats/distance/tests/data/mantel_veg_dm_vegan.txt -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data 2023-09-26T12:29:33,763 copying skbio/stats/distance/tests/data/exp_results_single_column.txt -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data 2023-09-26T12:29:33,765 copying skbio/stats/distance/tests/data/exp_results.txt -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data 2023-09-26T12:29:33,767 copying skbio/stats/distance/tests/data/pwmantel_exp_results_minimal.txt -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data 2023-09-26T12:29:33,769 copying skbio/stats/distance/tests/data/mantel_env_dm_vegan.txt -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data 2023-09-26T12:29:33,772 copying skbio/stats/distance/tests/data/pwmantel_exp_results_reordered_distance_matrices.txt -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data 2023-09-26T12:29:33,773 copying skbio/stats/distance/tests/data/pwmantel_exp_results_all_dms.txt -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data 2023-09-26T12:29:33,775 copying skbio/stats/distance/tests/data/df.txt -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data 2023-09-26T12:29:33,777 copying skbio/stats/distance/tests/data/bioenv_dm_vegan.txt -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data 2023-09-26T12:29:33,779 copying skbio/stats/distance/tests/data/bioenv_df_vegan.txt -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data 2023-09-26T12:29:33,781 copying skbio/stats/distance/tests/data/pwmantel_exp_results_minimal_with_labels.txt -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data 2023-09-26T12:29:33,783 copying skbio/stats/distance/tests/data/df_extra_column.txt -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data 2023-09-26T12:29:33,785 copying skbio/stats/distance/tests/data/moving_pictures_mf.tsv -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data 2023-09-26T12:29:33,787 copying skbio/stats/distance/tests/data/pwmantel_exp_results_dm_dm2.txt -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data 2023-09-26T12:29:33,789 copying skbio/stats/distance/tests/data/pwmantel_exp_results_duplicate_dms.txt -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data 2023-09-26T12:29:33,791 copying skbio/stats/distance/tests/data/pwmantel_exp_results_na_p_value.txt -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data 2023-09-26T12:29:33,793 copying skbio/stats/distance/tests/data/dm_reordered.txt -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data 2023-09-26T12:29:33,795 copying skbio/stats/distance/tests/data/exp_results_different_column_order.txt -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data 2023-09-26T12:29:33,797 copying skbio/stats/distance/tests/data/moving_pictures_dm.tsv -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data 2023-09-26T12:29:33,799 copying skbio/stats/distance/tests/data/dm.txt -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data 2023-09-26T12:29:33,801 copying skbio/stats/distance/tests/data/dm2.txt -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data 2023-09-26T12:29:33,803 copying skbio/stats/distance/tests/data/bioenv_exp_results_vegan.txt -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data 2023-09-26T12:29:33,805 copying skbio/stats/distance/tests/data/dm4.txt -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data 2023-09-26T12:29:33,807 copying skbio/stats/distance/tests/data/dm3.txt -> build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data 2023-09-26T12:29:33,809 creating build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,810 copying skbio/stats/ordination/tests/data/example3_biplot_scaling1 -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,812 copying skbio/stats/ordination/tests/data/exp_PCoAEigenResults_site -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,814 copying skbio/stats/ordination/tests/data/example3_species_scaling1_from_vegan -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,816 copying skbio/stats/ordination/tests/data/vare_rda_propexpl_from_vegan.csv -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,818 copying skbio/stats/ordination/tests/data/example2_sample_constraints_scaling1 -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,820 copying skbio/stats/ordination/tests/data/example2_site_scaling1_from_vegan -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,822 copying skbio/stats/ordination/tests/data/example3_Y -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,824 copying skbio/stats/ordination/tests/data/vare_rda_biplot_from_vegan.csv -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,826 copying skbio/stats/ordination/tests/data/PCoA_sample_data_3 -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,828 copying skbio/stats/ordination/tests/data/varespec.csv -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,830 copying skbio/stats/ordination/tests/data/PCoA_sample_data_3_fsvd_ref_3dim -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,831 copying skbio/stats/ordination/tests/data/vare_rda_eigvals_from_vegan.csv -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,833 copying skbio/stats/ordination/tests/data/varechem.csv -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,835 copying skbio/stats/ordination/tests/data/vare_rda_species_from_vegan.csv -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,838 copying skbio/stats/ordination/tests/data/example2_sample_constraints_scaling2 -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,840 copying skbio/stats/ordination/tests/data/PCoA_sample_data_12dim -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,842 copying skbio/stats/ordination/tests/data/exp_PCoAzeros_site -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,844 copying skbio/stats/ordination/tests/data/example3_sample_constraints_scaling1 -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,847 copying skbio/stats/ordination/tests/data/PCoA_sample_data_2 -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,849 copying skbio/stats/ordination/tests/data/vare_rda_constraints_from_vegan.csv -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,851 copying skbio/stats/ordination/tests/data/PCoA_biplot_projected_descriptors -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,852 copying skbio/stats/ordination/tests/data/example2_X -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,854 copying skbio/stats/ordination/tests/data/example3_site_scaling1_from_vegan -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,856 copying skbio/stats/ordination/tests/data/example3_sample_constraints_scaling2 -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,858 copying skbio/stats/ordination/tests/data/example3_biplot_scaling2 -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,860 copying skbio/stats/ordination/tests/data/PCoA_skbio -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,862 copying skbio/stats/ordination/tests/data/example2_Y -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,864 copying skbio/stats/ordination/tests/data/example2_species_scaling1_from_vegan -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,866 copying skbio/stats/ordination/tests/data/example3_species_scaling2_from_vegan -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,868 copying skbio/stats/ordination/tests/data/example3_X -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,870 copying skbio/stats/ordination/tests/data/L&L_CA_data -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,872 copying skbio/stats/ordination/tests/data/PCoA_sample_data -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,874 copying skbio/stats/ordination/tests/data/example2_biplot_scaling1 -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,876 copying skbio/stats/ordination/tests/data/example2_species_scaling2_from_vegan -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,877 copying skbio/stats/ordination/tests/data/example2_biplot_scaling2 -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,879 copying skbio/stats/ordination/tests/data/example2_site_scaling2_from_vegan -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,881 copying skbio/stats/ordination/tests/data/example3_site_scaling2_from_vegan -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,883 copying skbio/stats/ordination/tests/data/PCoA_sample_data_3_eigh_ref_3dim -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,885 copying skbio/stats/ordination/tests/data/vare_rda_sites_from_vegan.csv -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,887 copying skbio/stats/ordination/tests/data/PCoA_biplot_descriptors -> build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data 2023-09-26T12:29:33,889 creating build/lib.linux-armv7l-cpython-311/skbio/io/tests/data 2023-09-26T12:29:33,890 copying skbio/io/tests/data/example_file.bz2 -> build/lib.linux-armv7l-cpython-311/skbio/io/tests/data 2023-09-26T12:29:33,892 copying skbio/io/tests/data/big5_file.gz -> build/lib.linux-armv7l-cpython-311/skbio/io/tests/data 2023-09-26T12:29:33,895 copying skbio/io/tests/data/big5_file -> build/lib.linux-armv7l-cpython-311/skbio/io/tests/data 2023-09-26T12:29:33,897 copying skbio/io/tests/data/example_file -> build/lib.linux-armv7l-cpython-311/skbio/io/tests/data 2023-09-26T12:29:33,899 copying skbio/io/tests/data/example_file.gz -> build/lib.linux-armv7l-cpython-311/skbio/io/tests/data 2023-09-26T12:29:33,901 copying skbio/io/tests/data/real_file -> build/lib.linux-armv7l-cpython-311/skbio/io/tests/data 2023-09-26T12:29:33,902 copying skbio/io/tests/data/real_file_2 -> build/lib.linux-armv7l-cpython-311/skbio/io/tests/data 2023-09-26T12:29:33,905 copying skbio/io/tests/data/big5_file.bz2 -> build/lib.linux-armv7l-cpython-311/skbio/io/tests/data 2023-09-26T12:29:33,906 creating build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,907 copying skbio/io/format/tests/data/fasta_6_blanks_start_of_file -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,909 copying skbio/io/format/tests/data/qual_blank_lines_between_records -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,911 copying skbio/io/format/tests/data/qual_single_prot_seq_non_defaults -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,913 copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_empty_str -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,915 copying skbio/io/format/tests/data/fasta_multi_seq_roundtrip -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,917 copying skbio/io/format/tests/data/ordination_error7 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,919 copying skbio/io/format/tests/data/fastq_multi_whitespace_stripping -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,921 copying skbio/io/format/tests/data/fasta_description_newline_replacement_empty_str -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,923 copying skbio/io/format/tests/data/stockholm_invalid_nonexistent_gs -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,924 copying skbio/io/format/tests/data/error_qual_del.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,926 copying skbio/io/format/tests/data/fastq_invalid_missing_header -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,928 copying skbio/io/format/tests/data/fasta_single_dna_seq_defaults -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,930 copying skbio/io/format/tests/data/stockholm_different_padding -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,932 copying skbio/io/format/tests/data/ordination_error20 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,933 copying skbio/io/format/tests/data/longreads_as_illumina.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,936 copying skbio/io/format/tests/data/stockholm_invalid_nonexistent_gr -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,938 copying skbio/io/format/tests/data/fastq_multi_blank_end_of_file -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,939 copying skbio/io/format/tests/data/error_trunc_in_plus.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,941 copying skbio/io/format/tests/data/phylip_invalid_seq_too_long -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,943 copying skbio/io/format/tests/data/qual_3_seqs_non_defaults -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,945 copying skbio/io/format/tests/data/fastq_multi_blank_between_records -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,947 copying skbio/io/format/tests/data/legacy9_invalid_too_many_columns -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,949 copying skbio/io/format/tests/data/error_no_qual.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,951 copying skbio/io/format/tests/data/ordination_error10 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,953 copying skbio/io/format/tests/data/fasta_multi_seq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,955 copying skbio/io/format/tests/data/qual_single_bio_seq_non_defaults -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,957 copying skbio/io/format/tests/data/misc_dna_as_sanger.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,959 copying skbio/io/format/tests/data/taxdump_names.dmp -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,961 copying skbio/io/format/tests/data/stockholm_multiple_multi_line_trees -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,963 copying skbio/io/format/tests/data/qseq_multi_seq_illumina1.3 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,965 copying skbio/io/format/tests/data/qual_description_newline_replacement_multi_char -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,967 copying skbio/io/format/tests/data/fasta_single_bio_seq_non_defaults -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,969 copying skbio/io/format/tests/data/fasta_invalid_whitespace_only_sequence -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,970 copying skbio/io/format/tests/data/embl_multi_records -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,973 copying skbio/io/format/tests/data/fastq_wrapping_as_sanger_no_description -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,975 copying skbio/io/format/tests/data/error_long_qual.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,976 copying skbio/io/format/tests/data/blast6_custom_single_line -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,978 copying skbio/io/format/tests/data/error_qual_null.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,980 copying skbio/io/format/tests/data/fasta_3_seqs_non_defaults -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,982 copying skbio/io/format/tests/data/fastq_blank_lines -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,984 copying skbio/io/format/tests/data/embl_w_beginning_whitespace -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,986 copying skbio/io/format/tests/data/misc_dna_original_sanger.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,988 copying skbio/io/format/tests/data/ordination_error8 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,990 copying skbio/io/format/tests/data/fasta_invalid_missing_header -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,992 copying skbio/io/format/tests/data/stockholm_runon_gf_no_whitespace -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,994 copying skbio/io/format/tests/data/stockholm_multiple_references -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,996 copying skbio/io/format/tests/data/ordination_error13 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,997 copying skbio/io/format/tests/data/fasta_description_newline_replacement_none -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:33,999 copying skbio/io/format/tests/data/stockholm_missing_rn_tag -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,001 copying skbio/io/format/tests/data/error_qual_space.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,003 copying skbio/io/format/tests/data/qual_id_whitespace_replacement_empty_str -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,005 copying skbio/io/format/tests/data/stockholm_rna -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,007 copying skbio/io/format/tests/data/ordination_example2_scores -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,009 copying skbio/io/format/tests/data/qual_invalid_blank_line_within_seq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,011 copying skbio/io/format/tests/data/qual_5_ws_lines_start_of_file -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,012 copying skbio/io/format/tests/data/gff3_bad_missing_directive -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,014 copying skbio/io/format/tests/data/qual_id_whitespace_replacement_none -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,016 copying skbio/io/format/tests/data/error_qual_tab.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,018 copying skbio/io/format/tests/data/misc_rna_original_sanger.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,020 copying skbio/io/format/tests/data/qual_ws_lines_end_of_file -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,022 copying skbio/io/format/tests/data/fasta_invalid_blank_line_after_header -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,024 copying skbio/io/format/tests/data/qseq_invalid_x -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,025 copying skbio/io/format/tests/data/longreads_original_sanger.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,028 copying skbio/io/format/tests/data/ordination_error17 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,030 copying skbio/io/format/tests/data/qual_invalid_qual_scores_string -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,032 copying skbio/io/format/tests/data/fastq_invalid_blank_after_header -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,034 copying skbio/io/format/tests/data/qseq_invalid_filter -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,035 copying skbio/io/format/tests/data/fastq_wrapping_as_illumina_no_description -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,037 copying skbio/io/format/tests/data/fastq_invalid_blank_within_seq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,039 copying skbio/io/format/tests/data/qual_single_nuc_seq_non_defaults -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,041 copying skbio/io/format/tests/data/stockholm_missing_footer -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,043 copying skbio/io/format/tests/data/blast7_default_single_line -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,045 copying skbio/io/format/tests/data/stockholm_whitespace_only_lines -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,047 copying skbio/io/format/tests/data/illumina_full_range_as_illumina.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,049 copying skbio/io/format/tests/data/ordination_error14 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,050 copying skbio/io/format/tests/data/fastq_invalid_blank_after_seq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,052 copying skbio/io/format/tests/data/stockholm_no_data -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,054 copying skbio/io/format/tests/data/qual_6_ws_lines_start_of_file -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,056 copying skbio/io/format/tests/data/genbank_single_record_upper -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,058 copying skbio/io/format/tests/data/fasta_tabular_msa_different_type -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,060 copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site_constraints -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,062 copying skbio/io/format/tests/data/stockholm_duplicate_gc -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,064 copying skbio/io/format/tests/data/blast7_custom_mixed_nans -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,066 copying skbio/io/format/tests/data/error_trunc_in_title.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,068 copying skbio/io/format/tests/data/qual_max_width_1 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,070 copying skbio/io/format/tests/data/fasta_single_dna_seq_non_defaults -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,071 copying skbio/io/format/tests/data/genbank_w_beginning_whitespace -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,073 copying skbio/io/format/tests/data/genbank_6_blanks_start_of_file -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,075 copying skbio/io/format/tests/data/qseq_invalid_y -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,077 copying skbio/io/format/tests/data/error_double_seq.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,079 copying skbio/io/format/tests/data/qual_blanks_end_of_file -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,081 copying skbio/io/format/tests/data/phylip_invalid_seq_too_short -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,083 copying skbio/io/format/tests/data/stockholm_malformed_gf_line -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,084 copying skbio/io/format/tests/data/fastq_invalid_ws_line_within_seq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,086 copying skbio/io/format/tests/data/qual_ws_lines_between_records -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,088 copying skbio/io/format/tests/data/phylip_whitespace_in_header_1 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,090 copying skbio/io/format/tests/data/blast7_default_multi_line -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,092 copying skbio/io/format/tests/data/fastq_5_blanks_start_of_file -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,094 copying skbio/io/format/tests/data/stockholm_runon_gf_with_whitespace -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,096 copying skbio/io/format/tests/data/fasta_5_blanks_start_of_file -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,098 copying skbio/io/format/tests/data/fastq_multi_seq_sanger -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,100 copying skbio/io/format/tests/data/embl_single_record_simple -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,102 copying skbio/io/format/tests/data/stockholm_runon_references_mixed -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,104 copying skbio/io/format/tests/data/fastq_5_ws_lines_start_of_file -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,106 copying skbio/io/format/tests/data/wrapping_as_sanger.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,108 copying skbio/io/format/tests/data/legacy9_mixed_nans -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,109 copying skbio/io/format/tests/data/fasta_invalid_blank_sequence -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,111 copying skbio/io/format/tests/data/qual_3_seqs_defaults -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,113 copying skbio/io/format/tests/data/qual_description_newline_replacement_none -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,115 copying skbio/io/format/tests/data/ordination_error21 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,117 copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_species -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,119 copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_seq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,121 copying skbio/io/format/tests/data/genbank_5_blanks_start_of_file -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,123 copying skbio/io/format/tests/data/fasta_single_prot_seq_defaults -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,125 copying skbio/io/format/tests/data/fastq_invalid_missing_seq_data -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,127 copying skbio/io/format/tests/data/stockholm_missing_reference_items -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,128 copying skbio/io/format/tests/data/qseq_invalid_read -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,130 copying skbio/io/format/tests/data/phylip_dna_3_seqs -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,132 copying skbio/io/format/tests/data/ordination_error4 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,134 copying skbio/io/format/tests/data/qual_id_whitespace_replacement_multi_char -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,136 copying skbio/io/format/tests/data/fastq_single_seq_illumina1.8 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,138 copying skbio/io/format/tests/data/legacy9_invalid_differing_fields -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,140 copying skbio/io/format/tests/data/legacy9_multi_line -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,142 copying skbio/io/format/tests/data/blast6_custom_mixed_nans -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,143 copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_middle -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,145 copying skbio/io/format/tests/data/embl_uniprot_record -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,148 copying skbio/io/format/tests/data/error_short_qual.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,150 copying skbio/io/format/tests/data/stockholm_single_tree_without_id -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,152 copying skbio/io/format/tests/data/qual_invalid_blank_line_after_header -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,154 copying skbio/io/format/tests/data/ordination_error9 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,155 copying skbio/io/format/tests/data/qual_invalid_qual_scores_over_255 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,157 copying skbio/io/format/tests/data/stockholm_malformed_gr_line -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,159 copying skbio/io/format/tests/data/legacy9_single_line -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,161 copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_middle -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,163 copying skbio/io/format/tests/data/ordination_L&L_CA_data_scores -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,165 copying skbio/io/format/tests/data/solexa_full_range_original_solexa.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,167 copying skbio/io/format/tests/data/ordination_PCoA_sample_data_3_scores -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,169 copying skbio/io/format/tests/data/sanger_full_range_as_sanger.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,171 copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_first -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,173 copying skbio/io/format/tests/data/blast6_invalid_type_in_column -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,175 copying skbio/io/format/tests/data/qual_single_seq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,177 copying skbio/io/format/tests/data/fasta_blanks_end_of_file -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,179 copying skbio/io/format/tests/data/qual_description_newline_replacement_empty_str -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,180 copying skbio/io/format/tests/data/blast6_invalid_column_types -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,183 copying skbio/io/format/tests/data/longreads_as_sanger.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,185 copying skbio/io/format/tests/data/stockholm_malformed_data_line -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,187 copying skbio/io/format/tests/data/phylip_invalid_empty_line_after_header -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,188 copying skbio/io/format/tests/data/phylip_two_chunks -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,191 copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_none -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,192 copying skbio/io/format/tests/data/fasta_description_newline_replacement_multi_char -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,194 copying skbio/io/format/tests/data/qual_single_rna_seq_non_defaults -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,196 copying skbio/io/format/tests/data/qual_invalid_qual_scores_negative -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,198 copying skbio/io/format/tests/data/blast6_custom_minimal -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,200 copying skbio/io/format/tests/data/gff3_multi_record -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,202 copying skbio/io/format/tests/data/stockholm_multi_line_tree_with_id -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,204 copying skbio/io/format/tests/data/ordination_error19 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,206 copying skbio/io/format/tests/data/blast7_invalid_unrecognized_field -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,207 copying skbio/io/format/tests/data/stockholm_all_data_types -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,209 copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,211 copying skbio/io/format/tests/data/embl_single_record_lower -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,213 copying skbio/io/format/tests/data/stockholm_blank_lines -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,215 copying skbio/io/format/tests/data/fastq_multi_ws_lines_end_of_file -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,217 copying skbio/io/format/tests/data/qual_3_seqs_defaults_length_mismatch -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,219 copying skbio/io/format/tests/data/phylip_invalid_zero_seqs -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,221 copying skbio/io/format/tests/data/wrapping_as_illumina.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,223 copying skbio/io/format/tests/data/error_trunc_at_qual.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,225 copying skbio/io/format/tests/data/fastq_multi_ws_lines_between_records -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,227 copying skbio/io/format/tests/data/stockholm_runon_gs_no_whitespace -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,229 copying skbio/io/format/tests/data/genbank_single_record -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,231 copying skbio/io/format/tests/data/phylip_invalid_empty_line_before_header -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,233 copying skbio/io/format/tests/data/qual_invalid_missing_header -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,235 copying skbio/io/format/tests/data/phylip_whitespace_in_header_2 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,237 copying skbio/io/format/tests/data/illumina_full_range_as_sanger.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,238 copying skbio/io/format/tests/data/error_diff_ids.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,241 copying skbio/io/format/tests/data/qual_invalid_legacy_format -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,242 copying skbio/io/format/tests/data/qual_3_seqs_defaults_extra -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,244 copying skbio/io/format/tests/data/legacy9_and_blast7_default -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,246 copying skbio/io/format/tests/data/fasta_max_width_5 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,248 copying skbio/io/format/tests/data/stockholm_malformed_gs_line -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,250 copying skbio/io/format/tests/data/phylip_invalid_too_many_seqs -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,252 copying skbio/io/format/tests/data/fastq_invalid_blank_after_plus -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,254 copying skbio/io/format/tests/data/gff3_dna -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,256 copying skbio/io/format/tests/data/qual_max_width_5 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,257 copying skbio/io/format/tests/data/fastq_writer_illumina1.3_defaults -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,259 copying skbio/io/format/tests/data/error_trunc_in_qual.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,261 copying skbio/io/format/tests/data/ordination_error24 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,263 copying skbio/io/format/tests/data/qual_3_seqs_defaults_desc_mismatch -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,265 copying skbio/io/format/tests/data/qual_multi_seq_roundtrip -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,267 copying skbio/io/format/tests/data/illumina_full_range_original_illumina.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,269 copying skbio/io/format/tests/data/fasta_invalid_whitespace_line_after_header -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,271 copying skbio/io/format/tests/data/phylip_invalid_no_header -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,273 copying skbio/io/format/tests/data/blast6_invalid_number_of_columns -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,274 copying skbio/io/format/tests/data/stockholm_invalid_data_type -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,276 copying skbio/io/format/tests/data/fasta_mixed_qual_scores -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,278 copying skbio/io/format/tests/data/misc_rna_as_illumina.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,280 copying skbio/io/format/tests/data/ordination_error12 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,282 copying skbio/io/format/tests/data/ordination_error3 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,284 copying skbio/io/format/tests/data/fastq_writer_sanger_defaults -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,286 copying skbio/io/format/tests/data/phylip_invalid_zero_seq_len -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,287 copying skbio/io/format/tests/data/stockholm_single_reference -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,289 copying skbio/io/format/tests/data/stockholm_nonstring_labels -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,291 copying skbio/io/format/tests/data/stockholm_multiple_trees -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,293 copying skbio/io/format/tests/data/fasta_ws_lines_between_records -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,295 copying skbio/io/format/tests/data/stockholm_malformed_gc_line -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,297 copying skbio/io/format/tests/data/ordination_error2 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,299 copying skbio/io/format/tests/data/genbank_single_record_lower -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,301 copying skbio/io/format/tests/data/gff3_bad_wrong_columns -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,303 copying skbio/io/format/tests/data/fastq_wrapping_original_sanger_no_description -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,305 copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_multi_char -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,307 copying skbio/io/format/tests/data/stockholm_duplicate_sequence_names -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,309 copying skbio/io/format/tests/data/stockholm_differing_gc_data_length -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,311 copying skbio/io/format/tests/data/qual_invalid_blank_sequence -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,312 copying skbio/io/format/tests/data/blast7_invalid_differing_fields -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,314 copying skbio/io/format/tests/data/phylip_invalid_too_few_seqs -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,316 copying skbio/io/format/tests/data/fastq_invalid_blank_in_seq_at_symbol -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,318 copying skbio/io/format/tests/data/error_qual_unit_sep.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,320 copying skbio/io/format/tests/data/qual_3_seqs_defaults_id_mismatch -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,322 copying skbio/io/format/tests/data/phylip_single_seq_long -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,324 copying skbio/io/format/tests/data/blast7_invalid_no_data -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,326 copying skbio/io/format/tests/data/fasta_invalid_legacy_format -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,327 copying skbio/io/format/tests/data/fastq_invalid_blank_within_qual -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,329 copying skbio/io/format/tests/data/fasta_6_ws_lines_start_of_file -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,331 copying skbio/io/format/tests/data/qual_invalid_whitespace_line_in_seq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,333 copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_header -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,334 copying skbio/io/format/tests/data/empty -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,336 copying skbio/io/format/tests/data/blast7_custom_single_line -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,338 copying skbio/io/format/tests/data/ordination_exp_Ordination_PCoA_site -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,340 copying skbio/io/format/tests/data/embl_feature_level_record_no_FT -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,342 copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_last -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,343 copying skbio/io/format/tests/data/sanger_full_range_original_sanger.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,345 copying skbio/io/format/tests/data/error_trunc_in_seq.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,347 copying skbio/io/format/tests/data/stockholm_extensive_mixed -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,349 copying skbio/io/format/tests/data/stockholm_minimal -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,351 copying skbio/io/format/tests/data/fasta_blank_lines_between_records -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,353 copying skbio/io/format/tests/data/fasta_3_seqs_defaults -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,355 copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_species -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,357 copying skbio/io/format/tests/data/stockholm_multiple_msa -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,358 copying skbio/io/format/tests/data/stockholm_differing_seq_lengths -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,360 copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_last -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,362 copying skbio/io/format/tests/data/ordination_error5 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,365 copying skbio/io/format/tests/data/phylip_varied_whitespace_in_seqs -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,367 copying skbio/io/format/tests/data/blast7_invalid_for_sniffer_2 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,368 copying skbio/io/format/tests/data/sanger_full_range_as_illumina.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,370 copying skbio/io/format/tests/data/fasta_single_rna_seq_non_defaults -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,372 copying skbio/io/format/tests/data/fasta_single_rna_seq_defaults -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,374 copying skbio/io/format/tests/data/error_spaces.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,376 copying skbio/io/format/tests/data/ordination_error15 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,378 copying skbio/io/format/tests/data/tsv_8_fields -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,379 copying skbio/io/format/tests/data/qual_single_dna_seq_non_defaults -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,381 copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_plus -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,383 copying skbio/io/format/tests/data/ordination_error6 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,385 copying skbio/io/format/tests/data/qual_prot_seqs_odd_labels -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,387 copying skbio/io/format/tests/data/qual_tabular_msa_different_type -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,389 copying skbio/io/format/tests/data/stockholm_duplicate_gr -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,390 copying skbio/io/format/tests/data/stockholm_extensive -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,392 copying skbio/io/format/tests/data/error_tabs.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,394 copying skbio/io/format/tests/data/fasta_single_bio_seq_defaults -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,396 copying skbio/io/format/tests/data/ordination_error11 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,399 copying skbio/io/format/tests/data/stockholm_differing_gr_data_length -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,400 copying skbio/io/format/tests/data/ordination_example3_scores -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,403 copying skbio/io/format/tests/data/stockholm_single_tree_with_id -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,405 copying skbio/io/format/tests/data/error_trunc_at_plus.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,406 copying skbio/io/format/tests/data/phylip_invalid_header_too_short -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,409 copying skbio/io/format/tests/data/phylip_invalid_empty_line_between_seqs -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,411 copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site_constraints -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,413 copying skbio/io/format/tests/data/qseq_invalid_lane -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,415 copying skbio/io/format/tests/data/qual_5_blanks_start_of_file -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,416 copying skbio/io/format/tests/data/fasta_5_ws_lines_start_of_file -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,418 copying skbio/io/format/tests/data/ordination_error18 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,420 copying skbio/io/format/tests/data/fastq_multi_ws_lines_start_of_file -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,422 copying skbio/io/format/tests/data/fasta_10_seqs -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,424 copying skbio/io/format/tests/data/qual_6_blanks_start_of_file -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,426 copying skbio/io/format/tests/data/fastq_writer_sanger_non_defaults -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,428 copying skbio/io/format/tests/data/fasta_invalid_whitespace_only_line_within_sequence -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,430 copying skbio/io/format/tests/data/stockholm_multi_line_tree_no_id -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,432 copying skbio/io/format/tests/data/stockholm_duplicate_tree_ids -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,434 copying skbio/io/format/tests/data/embl_constructed -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,436 copying skbio/io/format/tests/data/fasta_invalid_after_10_seqs -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,437 copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,439 copying skbio/io/format/tests/data/ordination_error1 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,442 copying skbio/io/format/tests/data/embl_single_record_upper -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,444 copying skbio/io/format/tests/data/qual_multi_seq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,446 copying skbio/io/format/tests/data/embl_feature_level_record -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,448 copying skbio/io/format/tests/data/fastq_whitespace_only_lines -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,450 copying skbio/io/format/tests/data/fasta_ws_lines_end_of_file -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,452 copying skbio/io/format/tests/data/qual_2_seqs_defaults -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,454 copying skbio/io/format/tests/data/fastq_invalid_ws_line_within_qual -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,456 copying skbio/io/format/tests/data/ordination_error22 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,458 copying skbio/io/format/tests/data/blast6_custom_multi_line -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,460 copying skbio/io/format/tests/data/stockholm_missing_header -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,461 copying skbio/io/format/tests/data/phylip_whitespace_in_header_3 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,463 copying skbio/io/format/tests/data/qual_invalid_ws_line_after_header -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,465 copying skbio/io/format/tests/data/qual_invalid_whitespace_only_sequence -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,467 copying skbio/io/format/tests/data/blast7_custom_multi_line -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,469 copying skbio/io/format/tests/data/tsv_10_fields -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,471 copying skbio/io/format/tests/data/stockholm_two_of_each_metadata -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,473 copying skbio/io/format/tests/data/ordination_error23 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,475 copying skbio/io/format/tests/data/blast6_default_single_line -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,477 copying skbio/io/format/tests/data/blast7_invalid_too_many_columns -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,479 copying skbio/io/format/tests/data/phylip_single_seq_short -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,480 copying skbio/io/format/tests/data/fasta_single_seq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,482 copying skbio/io/format/tests/data/gff3_single_record -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,484 copying skbio/io/format/tests/data/blast7_invalid_gibberish -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,486 copying skbio/io/format/tests/data/wrapping_original_sanger.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,488 copying skbio/io/format/tests/data/blast7_custom_minimal -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,489 copying skbio/io/format/tests/data/stockholm_metadata_only -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,491 copying skbio/io/format/tests/data/fastq_single_seq_illumina1.3 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,493 copying skbio/io/format/tests/data/taxdump_nodes.dmp -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,495 copying skbio/io/format/tests/data/qseq_invalid_tile -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,497 copying skbio/io/format/tests/data/fasta_single_prot_seq_non_defaults -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,499 copying skbio/io/format/tests/data/qseq_single_seq_sanger -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,501 copying skbio/io/format/tests/data/blast7_invalid_for_sniffer -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,503 copying skbio/io/format/tests/data/blast6_default_multi_line -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,505 copying skbio/io/format/tests/data/misc_rna_as_sanger.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,507 copying skbio/io/format/tests/data/stockholm_data_only -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,509 copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_first -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,511 copying skbio/io/format/tests/data/fasta_prot_seqs_odd_labels -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,513 copying skbio/io/format/tests/data/genbank_missing_locus_name -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,515 copying skbio/io/format/tests/data/stockholm_runon_gs_with_whitespace -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,517 copying skbio/io/format/tests/data/phylip_variable_length_ids -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,519 copying skbio/io/format/tests/data/whitespace_only -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,521 copying skbio/io/format/tests/data/ordination_error16 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,523 copying skbio/io/format/tests/data/error_qual_escape.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,525 copying skbio/io/format/tests/data/fasta_max_width_1 -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,527 copying skbio/io/format/tests/data/phylip_invalid_header_too_long -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,529 copying skbio/io/format/tests/data/error_qual_vtab.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,531 copying skbio/io/format/tests/data/qual_invalid_qual_scores_float -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,532 copying skbio/io/format/tests/data/fastq_multi_blank_start_of_file -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,534 copying skbio/io/format/tests/data/stockholm_runon_references -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,536 copying skbio/io/format/tests/data/genbank_multi_records -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,538 copying skbio/io/format/tests/data/fasta_invalid_blank_line_within_sequence -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,540 copying skbio/io/format/tests/data/embl_single_record -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,542 copying skbio/io/format/tests/data/misc_dna_as_illumina.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,543 copying skbio/io/format/tests/data/error_double_qual.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,545 copying skbio/io/format/tests/data/error_trunc_at_seq.fastq -> build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data 2023-09-26T12:29:34,547 creating build/lib.linux-armv7l-cpython-311/skbio/diversity/beta/tests/data 2023-09-26T12:29:34,547 creating build/lib.linux-armv7l-cpython-311/skbio/diversity/beta/tests/data/qiime-191-tt 2023-09-26T12:29:34,548 copying skbio/diversity/beta/tests/data/qiime-191-tt/tree.nwk -> build/lib.linux-armv7l-cpython-311/skbio/diversity/beta/tests/data/qiime-191-tt 2023-09-26T12:29:34,550 copying skbio/diversity/beta/tests/data/qiime-191-tt/weighted_unifrac_dm.txt -> build/lib.linux-armv7l-cpython-311/skbio/diversity/beta/tests/data/qiime-191-tt 2023-09-26T12:29:34,552 copying skbio/diversity/beta/tests/data/qiime-191-tt/weighted_normalized_unifrac_dm.txt -> build/lib.linux-armv7l-cpython-311/skbio/diversity/beta/tests/data/qiime-191-tt 2023-09-26T12:29:34,554 copying skbio/diversity/beta/tests/data/qiime-191-tt/README.md -> build/lib.linux-armv7l-cpython-311/skbio/diversity/beta/tests/data/qiime-191-tt 2023-09-26T12:29:34,556 copying skbio/diversity/beta/tests/data/qiime-191-tt/unweighted_unifrac_dm.txt -> build/lib.linux-armv7l-cpython-311/skbio/diversity/beta/tests/data/qiime-191-tt 2023-09-26T12:29:34,558 copying skbio/diversity/beta/tests/data/qiime-191-tt/otu-table.tsv -> build/lib.linux-armv7l-cpython-311/skbio/diversity/beta/tests/data/qiime-191-tt 2023-09-26T12:29:34,560 creating build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/tests/data 2023-09-26T12:29:34,560 creating build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/tests/data/qiime-191-tt 2023-09-26T12:29:34,561 copying skbio/diversity/alpha/tests/data/qiime-191-tt/faith-pd.txt -> build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/tests/data/qiime-191-tt 2023-09-26T12:29:34,564 copying skbio/diversity/alpha/tests/data/qiime-191-tt/tree.nwk -> build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/tests/data/qiime-191-tt 2023-09-26T12:29:34,566 copying skbio/diversity/alpha/tests/data/qiime-191-tt/README.md -> build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/tests/data/qiime-191-tt 2023-09-26T12:29:34,568 copying skbio/diversity/alpha/tests/data/qiime-191-tt/otu-table.tsv -> build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/tests/data/qiime-191-tt 2023-09-26T12:29:34,585 running build_ext 2023-09-26T12:29:35,124 building 'skbio.metadata._intersection' extension 2023-09-26T12:29:35,125 creating build/temp.linux-armv7l-cpython-311 2023-09-26T12:29:35,126 creating build/temp.linux-armv7l-cpython-311/skbio 2023-09-26T12:29:35,126 creating build/temp.linux-armv7l-cpython-311/skbio/metadata 2023-09-26T12:29:35,127 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-sso_sb5z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c skbio/metadata/_intersection.c -o build/temp.linux-armv7l-cpython-311/skbio/metadata/_intersection.o 2023-09-26T12:29:45,618 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/skbio/metadata/_intersection.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/skbio/metadata/_intersection.cpython-311-arm-linux-gnueabihf.so 2023-09-26T12:29:45,737 building 'skbio.stats.__subsample' extension 2023-09-26T12:29:45,738 creating build/temp.linux-armv7l-cpython-311/skbio/stats 2023-09-26T12:29:45,738 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-sso_sb5z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/tmp/pip-build-env-sso_sb5z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c skbio/stats/__subsample.c -o build/temp.linux-armv7l-cpython-311/skbio/stats/__subsample.o 2023-09-26T12:29:46,143 In file included from /tmp/pip-build-env-sso_sb5z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-09-26T12:29:46,144 from /tmp/pip-build-env-sso_sb5z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-26T12:29:46,144 from /tmp/pip-build-env-sso_sb5z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-26T12:29:46,145 from skbio/stats/__subsample.c:768: 2023-09-26T12:29:46,145 /tmp/pip-build-env-sso_sb5z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-26T12:29:46,146 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-26T12:29:46,147 | ^~~~~~~ 2023-09-26T12:29:48,935 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/skbio/stats/__subsample.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/skbio/stats/__subsample.cpython-311-arm-linux-gnueabihf.so 2023-09-26T12:29:49,034 building 'skbio.alignment._ssw_wrapper' extension 2023-09-26T12:29:49,035 creating build/temp.linux-armv7l-cpython-311/skbio/alignment 2023-09-26T12:29:49,035 creating build/temp.linux-armv7l-cpython-311/skbio/alignment/_lib 2023-09-26T12:29:49,036 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-sso_sb5z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/tmp/pip-build-env-sso_sb5z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c skbio/alignment/_lib/ssw.c -o build/temp.linux-armv7l-cpython-311/skbio/alignment/_lib/ssw.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP 2023-09-26T12:29:52,678 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-sso_sb5z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/tmp/pip-build-env-sso_sb5z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c skbio/alignment/_ssw_wrapper.c -o build/temp.linux-armv7l-cpython-311/skbio/alignment/_ssw_wrapper.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP 2023-09-26T12:29:53,064 In file included from /tmp/pip-build-env-sso_sb5z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-09-26T12:29:53,065 from /tmp/pip-build-env-sso_sb5z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-26T12:29:53,065 from /tmp/pip-build-env-sso_sb5z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-26T12:29:53,066 from skbio/alignment/_ssw_wrapper.c:777: 2023-09-26T12:29:53,066 /tmp/pip-build-env-sso_sb5z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-26T12:29:53,066 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-26T12:29:53,067 | ^~~~~~~ 2023-09-26T12:30:04,627 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/skbio/alignment/_lib/ssw.o build/temp.linux-armv7l-cpython-311/skbio/alignment/_ssw_wrapper.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/skbio/alignment/_ssw_wrapper.cpython-311-arm-linux-gnueabihf.so 2023-09-26T12:30:04,753 building 'skbio.diversity._phylogenetic' extension 2023-09-26T12:30:04,753 creating build/temp.linux-armv7l-cpython-311/skbio/diversity 2023-09-26T12:30:04,754 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-sso_sb5z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/tmp/pip-build-env-sso_sb5z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c skbio/diversity/_phylogenetic.c -o build/temp.linux-armv7l-cpython-311/skbio/diversity/_phylogenetic.o 2023-09-26T12:30:05,145 In file included from /tmp/pip-build-env-sso_sb5z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-09-26T12:30:05,146 from /tmp/pip-build-env-sso_sb5z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-26T12:30:05,146 from /tmp/pip-build-env-sso_sb5z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-26T12:30:05,147 from skbio/diversity/_phylogenetic.c:768: 2023-09-26T12:30:05,147 /tmp/pip-build-env-sso_sb5z/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-26T12:30:05,148 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-26T12:30:05,149 | ^~~~~~~ 2023-09-26T12:30:10,572 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/skbio/diversity/_phylogenetic.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/skbio/diversity/_phylogenetic.cpython-311-arm-linux-gnueabihf.so 2023-09-26T12:30:10,676 building 'skbio.stats.ordination._cutils' extension 2023-09-26T12:30:10,676 creating build/temp.linux-armv7l-cpython-311/skbio/stats/ordination 2023-09-26T12:30:10,677 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-sso_sb5z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c skbio/stats/ordination/_cutils.c -o build/temp.linux-armv7l-cpython-311/skbio/stats/ordination/_cutils.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP 2023-09-26T12:30:30,813 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/skbio/stats/ordination/_cutils.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/_cutils.cpython-311-arm-linux-gnueabihf.so 2023-09-26T12:30:30,953 building 'skbio.stats.distance._cutils' extension 2023-09-26T12:30:30,953 creating build/temp.linux-armv7l-cpython-311/skbio/stats/distance 2023-09-26T12:30:30,954 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-sso_sb5z/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c skbio/stats/distance/_cutils.c -o build/temp.linux-armv7l-cpython-311/skbio/stats/distance/_cutils.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP 2023-09-26T12:30:54,058 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/skbio/stats/distance/_cutils.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/skbio/stats/distance/_cutils.cpython-311-arm-linux-gnueabihf.so 2023-09-26T12:30:54,211 installing to build/bdist.linux-armv7l/wheel 2023-09-26T12:30:54,212 running install 2023-09-26T12:30:54,236 running install_lib 2023-09-26T12:30:54,245 creating build/bdist.linux-armv7l 2023-09-26T12:30:54,246 creating build/bdist.linux-armv7l/wheel 2023-09-26T12:30:54,247 creating build/bdist.linux-armv7l/wheel/skbio 2023-09-26T12:30:54,249 copying build/lib.linux-armv7l-cpython-311/skbio/__init__.py -> build/bdist.linux-armv7l/wheel/skbio 2023-09-26T12:30:54,250 copying build/lib.linux-armv7l-cpython-311/skbio/workflow.py -> build/bdist.linux-armv7l/wheel/skbio 2023-09-26T12:30:54,254 creating build/bdist.linux-armv7l/wheel/skbio/tree 2023-09-26T12:30:54,255 copying build/lib.linux-armv7l-cpython-311/skbio/tree/_exception.py -> build/bdist.linux-armv7l/wheel/skbio/tree 2023-09-26T12:30:54,257 copying build/lib.linux-armv7l-cpython-311/skbio/tree/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/tree 2023-09-26T12:30:54,259 copying build/lib.linux-armv7l-cpython-311/skbio/tree/_nj.py -> build/bdist.linux-armv7l/wheel/skbio/tree 2023-09-26T12:30:54,261 copying build/lib.linux-armv7l-cpython-311/skbio/tree/_majority_rule.py -> build/bdist.linux-armv7l/wheel/skbio/tree 2023-09-26T12:30:54,264 creating build/bdist.linux-armv7l/wheel/skbio/tree/tests 2023-09-26T12:30:54,265 copying build/lib.linux-armv7l-cpython-311/skbio/tree/tests/test_nj.py -> build/bdist.linux-armv7l/wheel/skbio/tree/tests 2023-09-26T12:30:54,267 copying build/lib.linux-armv7l-cpython-311/skbio/tree/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/tree/tests 2023-09-26T12:30:54,269 copying build/lib.linux-armv7l-cpython-311/skbio/tree/tests/test_tree.py -> build/bdist.linux-armv7l/wheel/skbio/tree/tests 2023-09-26T12:30:54,273 copying build/lib.linux-armv7l-cpython-311/skbio/tree/tests/test_majority_rule.py -> build/bdist.linux-armv7l/wheel/skbio/tree/tests 2023-09-26T12:30:54,275 copying build/lib.linux-armv7l-cpython-311/skbio/tree/_tree.py -> build/bdist.linux-armv7l/wheel/skbio/tree 2023-09-26T12:30:54,280 creating build/bdist.linux-armv7l/wheel/skbio/util 2023-09-26T12:30:54,281 copying build/lib.linux-armv7l-cpython-311/skbio/util/_exception.py -> build/bdist.linux-armv7l/wheel/skbio/util 2023-09-26T12:30:54,282 copying build/lib.linux-armv7l-cpython-311/skbio/util/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/util 2023-09-26T12:30:54,284 copying build/lib.linux-armv7l-cpython-311/skbio/util/_warning.py -> build/bdist.linux-armv7l/wheel/skbio/util 2023-09-26T12:30:54,286 copying build/lib.linux-armv7l-cpython-311/skbio/util/_testing.py -> build/bdist.linux-armv7l/wheel/skbio/util 2023-09-26T12:30:54,289 copying build/lib.linux-armv7l-cpython-311/skbio/util/_misc.py -> build/bdist.linux-armv7l/wheel/skbio/util 2023-09-26T12:30:54,291 copying build/lib.linux-armv7l-cpython-311/skbio/util/_decorator.py -> build/bdist.linux-armv7l/wheel/skbio/util 2023-09-26T12:30:54,294 creating build/bdist.linux-armv7l/wheel/skbio/util/tests 2023-09-26T12:30:54,295 copying build/lib.linux-armv7l-cpython-311/skbio/util/tests/test_misc.py -> build/bdist.linux-armv7l/wheel/skbio/util/tests 2023-09-26T12:30:54,298 copying build/lib.linux-armv7l-cpython-311/skbio/util/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/util/tests 2023-09-26T12:30:54,299 copying build/lib.linux-armv7l-cpython-311/skbio/util/tests/test_testing.py -> build/bdist.linux-armv7l/wheel/skbio/util/tests 2023-09-26T12:30:54,302 copying build/lib.linux-armv7l-cpython-311/skbio/util/tests/test_decorator.py -> build/bdist.linux-armv7l/wheel/skbio/util/tests 2023-09-26T12:30:54,304 creating build/bdist.linux-armv7l/wheel/skbio/sequence 2023-09-26T12:30:54,305 copying build/lib.linux-armv7l-cpython-311/skbio/sequence/_rna.py -> build/bdist.linux-armv7l/wheel/skbio/sequence 2023-09-26T12:30:54,308 copying build/lib.linux-armv7l-cpython-311/skbio/sequence/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/sequence 2023-09-26T12:30:54,310 copying build/lib.linux-armv7l-cpython-311/skbio/sequence/_genetic_code.py -> build/bdist.linux-armv7l/wheel/skbio/sequence 2023-09-26T12:30:54,313 copying build/lib.linux-armv7l-cpython-311/skbio/sequence/_nucleotide_mixin.py -> build/bdist.linux-armv7l/wheel/skbio/sequence 2023-09-26T12:30:54,315 copying build/lib.linux-armv7l-cpython-311/skbio/sequence/_dna.py -> build/bdist.linux-armv7l/wheel/skbio/sequence 2023-09-26T12:30:54,318 copying build/lib.linux-armv7l-cpython-311/skbio/sequence/_repr.py -> build/bdist.linux-armv7l/wheel/skbio/sequence 2023-09-26T12:30:54,320 copying build/lib.linux-armv7l-cpython-311/skbio/sequence/_sequence.py -> build/bdist.linux-armv7l/wheel/skbio/sequence 2023-09-26T12:30:54,324 copying build/lib.linux-armv7l-cpython-311/skbio/sequence/_grammared_sequence.py -> build/bdist.linux-armv7l/wheel/skbio/sequence 2023-09-26T12:30:54,328 copying build/lib.linux-armv7l-cpython-311/skbio/sequence/distance.py -> build/bdist.linux-armv7l/wheel/skbio/sequence 2023-09-26T12:30:54,333 creating build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2023-09-26T12:30:54,335 copying build/lib.linux-armv7l-cpython-311/skbio/sequence/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2023-09-26T12:30:54,338 copying build/lib.linux-armv7l-cpython-311/skbio/sequence/tests/test_dna.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2023-09-26T12:30:54,340 copying build/lib.linux-armv7l-cpython-311/skbio/sequence/tests/test_rna.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2023-09-26T12:30:54,342 copying build/lib.linux-armv7l-cpython-311/skbio/sequence/tests/test_grammared_sequence.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2023-09-26T12:30:54,345 copying build/lib.linux-armv7l-cpython-311/skbio/sequence/tests/test_protein.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2023-09-26T12:30:54,347 copying build/lib.linux-armv7l-cpython-311/skbio/sequence/tests/test_nucleotide_sequences.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2023-09-26T12:30:54,350 copying build/lib.linux-armv7l-cpython-311/skbio/sequence/tests/test_sequence.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2023-09-26T12:30:54,354 copying build/lib.linux-armv7l-cpython-311/skbio/sequence/tests/test_genetic_code.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2023-09-26T12:30:54,357 copying build/lib.linux-armv7l-cpython-311/skbio/sequence/tests/test_distance.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2023-09-26T12:30:54,359 copying build/lib.linux-armv7l-cpython-311/skbio/sequence/_protein.py -> build/bdist.linux-armv7l/wheel/skbio/sequence 2023-09-26T12:30:54,361 copying build/lib.linux-armv7l-cpython-311/skbio/_base.py -> build/bdist.linux-armv7l/wheel/skbio 2023-09-26T12:30:54,363 creating build/bdist.linux-armv7l/wheel/skbio/alignment 2023-09-26T12:30:54,364 copying build/lib.linux-armv7l-cpython-311/skbio/alignment/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/alignment 2023-09-26T12:30:54,367 copying build/lib.linux-armv7l-cpython-311/skbio/alignment/_ssw_wrapper.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/skbio/alignment 2023-09-26T12:30:54,380 copying build/lib.linux-armv7l-cpython-311/skbio/alignment/_repr.py -> build/bdist.linux-armv7l/wheel/skbio/alignment 2023-09-26T12:30:54,381 copying build/lib.linux-armv7l-cpython-311/skbio/alignment/_tabular_msa.py -> build/bdist.linux-armv7l/wheel/skbio/alignment 2023-09-26T12:30:54,385 copying build/lib.linux-armv7l-cpython-311/skbio/alignment/_pairwise.py -> build/bdist.linux-armv7l/wheel/skbio/alignment 2023-09-26T12:30:54,388 copying build/lib.linux-armv7l-cpython-311/skbio/alignment/_indexing.py -> build/bdist.linux-armv7l/wheel/skbio/alignment 2023-09-26T12:30:54,391 creating build/bdist.linux-armv7l/wheel/skbio/alignment/_lib 2023-09-26T12:30:54,392 copying build/lib.linux-armv7l-cpython-311/skbio/alignment/_lib/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/alignment/_lib 2023-09-26T12:30:54,394 creating build/bdist.linux-armv7l/wheel/skbio/alignment/tests 2023-09-26T12:30:54,395 copying build/lib.linux-armv7l-cpython-311/skbio/alignment/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/alignment/tests 2023-09-26T12:30:54,397 copying build/lib.linux-armv7l-cpython-311/skbio/alignment/tests/test_ssw.py -> build/bdist.linux-armv7l/wheel/skbio/alignment/tests 2023-09-26T12:30:54,400 copying build/lib.linux-armv7l-cpython-311/skbio/alignment/tests/test_pairwise.py -> build/bdist.linux-armv7l/wheel/skbio/alignment/tests 2023-09-26T12:30:54,403 copying build/lib.linux-armv7l-cpython-311/skbio/alignment/tests/test_tabular_msa.py -> build/bdist.linux-armv7l/wheel/skbio/alignment/tests 2023-09-26T12:30:54,409 creating build/bdist.linux-armv7l/wheel/skbio/metadata 2023-09-26T12:30:54,411 copying build/lib.linux-armv7l-cpython-311/skbio/metadata/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/metadata 2023-09-26T12:30:54,413 copying build/lib.linux-armv7l-cpython-311/skbio/metadata/_intersection.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/skbio/metadata 2023-09-26T12:30:54,427 copying build/lib.linux-armv7l-cpython-311/skbio/metadata/_repr.py -> build/bdist.linux-armv7l/wheel/skbio/metadata 2023-09-26T12:30:54,429 copying build/lib.linux-armv7l-cpython-311/skbio/metadata/_interval.py -> build/bdist.linux-armv7l/wheel/skbio/metadata 2023-09-26T12:30:54,432 copying build/lib.linux-armv7l-cpython-311/skbio/metadata/_testing.py -> build/bdist.linux-armv7l/wheel/skbio/metadata 2023-09-26T12:30:54,435 copying build/lib.linux-armv7l-cpython-311/skbio/metadata/_mixin.py -> build/bdist.linux-armv7l/wheel/skbio/metadata 2023-09-26T12:30:54,438 creating build/bdist.linux-armv7l/wheel/skbio/metadata/tests 2023-09-26T12:30:54,439 copying build/lib.linux-armv7l-cpython-311/skbio/metadata/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests 2023-09-26T12:30:54,440 copying build/lib.linux-armv7l-cpython-311/skbio/metadata/tests/test_intersection.py -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests 2023-09-26T12:30:54,442 copying build/lib.linux-armv7l-cpython-311/skbio/metadata/tests/test_mixin.py -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests 2023-09-26T12:30:54,444 copying build/lib.linux-armv7l-cpython-311/skbio/metadata/tests/test_interval.py -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests 2023-09-26T12:30:54,447 copying build/lib.linux-armv7l-cpython-311/skbio/test.py -> build/bdist.linux-armv7l/wheel/skbio 2023-09-26T12:30:54,449 creating build/bdist.linux-armv7l/wheel/skbio/stats 2023-09-26T12:30:54,450 copying build/lib.linux-armv7l-cpython-311/skbio/stats/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats 2023-09-26T12:30:54,452 copying build/lib.linux-armv7l-cpython-311/skbio/stats/power.py -> build/bdist.linux-armv7l/wheel/skbio/stats 2023-09-26T12:30:54,455 copying build/lib.linux-armv7l-cpython-311/skbio/stats/composition.py -> build/bdist.linux-armv7l/wheel/skbio/stats 2023-09-26T12:30:54,459 creating build/bdist.linux-armv7l/wheel/skbio/stats/distance 2023-09-26T12:30:54,460 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance 2023-09-26T12:30:54,462 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/_bioenv.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance 2023-09-26T12:30:54,464 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/_base.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance 2023-09-26T12:30:54,467 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/_anosim.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance 2023-09-26T12:30:54,469 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/_utils.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance 2023-09-26T12:30:54,472 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/_permdisp.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance 2023-09-26T12:30:54,474 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/_mantel.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance 2023-09-26T12:30:54,477 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/_cutils.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/skbio/stats/distance 2023-09-26T12:30:54,496 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/_permanova.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance 2023-09-26T12:30:54,499 creating build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests 2023-09-26T12:30:54,500 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/test_permanova.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests 2023-09-26T12:30:54,502 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests 2023-09-26T12:30:54,504 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/test_permdisp.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests 2023-09-26T12:30:54,507 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/test_base.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests 2023-09-26T12:30:54,510 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/test_anosim.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests 2023-09-26T12:30:54,512 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/test_bioenv.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests 2023-09-26T12:30:54,516 creating build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-09-26T12:30:54,517 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data/mantel_veg_dm_vegan.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-09-26T12:30:54,520 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data/exp_results_single_column.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-09-26T12:30:54,522 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data/exp_results.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-09-26T12:30:54,524 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data/pwmantel_exp_results_minimal.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-09-26T12:30:54,526 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data/mantel_env_dm_vegan.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-09-26T12:30:54,528 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data/pwmantel_exp_results_reordered_distance_matrices.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-09-26T12:30:54,530 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data/pwmantel_exp_results_all_dms.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-09-26T12:30:54,532 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data/df.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-09-26T12:30:54,535 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data/bioenv_dm_vegan.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-09-26T12:30:54,537 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data/bioenv_df_vegan.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-09-26T12:30:54,539 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data/pwmantel_exp_results_minimal_with_labels.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-09-26T12:30:54,541 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data/df_extra_column.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-09-26T12:30:54,543 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data/moving_pictures_mf.tsv -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-09-26T12:30:54,545 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data/pwmantel_exp_results_dm_dm2.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-09-26T12:30:54,547 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data/pwmantel_exp_results_duplicate_dms.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-09-26T12:30:54,549 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data/pwmantel_exp_results_na_p_value.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-09-26T12:30:54,552 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data/dm_reordered.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-09-26T12:30:54,554 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data/exp_results_different_column_order.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-09-26T12:30:54,557 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data/moving_pictures_dm.tsv -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-09-26T12:30:54,560 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data/dm.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-09-26T12:30:54,563 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data/dm2.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-09-26T12:30:54,566 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data/bioenv_exp_results_vegan.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-09-26T12:30:54,568 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data/dm4.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-09-26T12:30:54,571 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/data/dm3.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2023-09-26T12:30:54,574 copying build/lib.linux-armv7l-cpython-311/skbio/stats/distance/tests/test_mantel.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests 2023-09-26T12:30:54,578 creating build/bdist.linux-armv7l/wheel/skbio/stats/evolve 2023-09-26T12:30:54,579 copying build/lib.linux-armv7l-cpython-311/skbio/stats/evolve/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/evolve 2023-09-26T12:30:54,582 copying build/lib.linux-armv7l-cpython-311/skbio/stats/evolve/_hommola.py -> build/bdist.linux-armv7l/wheel/skbio/stats/evolve 2023-09-26T12:30:54,586 creating build/bdist.linux-armv7l/wheel/skbio/stats/evolve/tests 2023-09-26T12:30:54,587 copying build/lib.linux-armv7l-cpython-311/skbio/stats/evolve/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/evolve/tests 2023-09-26T12:30:54,590 copying build/lib.linux-armv7l-cpython-311/skbio/stats/evolve/tests/test_hommola.py -> build/bdist.linux-armv7l/wheel/skbio/stats/evolve/tests 2023-09-26T12:30:54,593 creating build/bdist.linux-armv7l/wheel/skbio/stats/ordination 2023-09-26T12:30:54,595 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination 2023-09-26T12:30:54,598 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/_correspondence_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination 2023-09-26T12:30:54,600 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/_canonical_correspondence_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination 2023-09-26T12:30:54,603 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/_utils.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination 2023-09-26T12:30:54,606 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/_redundancy_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination 2023-09-26T12:30:54,610 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/_cutils.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination 2023-09-26T12:30:54,633 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/_principal_coordinate_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination 2023-09-26T12:30:54,637 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/_ordination_results.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination 2023-09-26T12:30:54,641 creating build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests 2023-09-26T12:30:54,642 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests 2023-09-26T12:30:54,645 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/test_correspondence_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests 2023-09-26T12:30:54,648 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests 2023-09-26T12:30:54,651 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/test_principal_coordinate_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests 2023-09-26T12:30:54,654 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/test_redundancy_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests 2023-09-26T12:30:54,656 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/test_ordination_results.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests 2023-09-26T12:30:54,658 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/test_util.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests 2023-09-26T12:30:54,661 creating build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,662 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/example3_biplot_scaling1 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,664 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/exp_PCoAEigenResults_site -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,666 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/example3_species_scaling1_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,668 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/vare_rda_propexpl_from_vegan.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,669 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/example2_sample_constraints_scaling1 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,671 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/example2_site_scaling1_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,673 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/example3_Y -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,675 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/vare_rda_biplot_from_vegan.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,677 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/PCoA_sample_data_3 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,678 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/varespec.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,680 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/PCoA_sample_data_3_fsvd_ref_3dim -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,682 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/vare_rda_eigvals_from_vegan.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,683 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/varechem.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,685 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/vare_rda_species_from_vegan.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,687 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/example2_sample_constraints_scaling2 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,689 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/PCoA_sample_data_12dim -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,691 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/exp_PCoAzeros_site -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,693 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/example3_sample_constraints_scaling1 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,695 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/PCoA_sample_data_2 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,697 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/vare_rda_constraints_from_vegan.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,699 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/PCoA_biplot_projected_descriptors -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,701 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/example2_X -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,702 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/example3_site_scaling1_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,704 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/example3_sample_constraints_scaling2 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,706 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/example3_biplot_scaling2 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,708 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/PCoA_skbio -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,710 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/example2_Y -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,712 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/example2_species_scaling1_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,713 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/example3_species_scaling2_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,715 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/example3_X -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,717 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/L&L_CA_data -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,718 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/PCoA_sample_data -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,720 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/example2_biplot_scaling1 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,722 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/example2_species_scaling2_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,723 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/example2_biplot_scaling2 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,725 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/example2_site_scaling2_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,727 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/example3_site_scaling2_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,728 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/PCoA_sample_data_3_eigh_ref_3dim -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,730 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/vare_rda_sites_from_vegan.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,732 copying build/lib.linux-armv7l-cpython-311/skbio/stats/ordination/tests/data/PCoA_biplot_descriptors -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2023-09-26T12:30:54,734 copying build/lib.linux-armv7l-cpython-311/skbio/stats/__subsample.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/skbio/stats 2023-09-26T12:30:54,738 copying build/lib.linux-armv7l-cpython-311/skbio/stats/_subsample.py -> build/bdist.linux-armv7l/wheel/skbio/stats 2023-09-26T12:30:54,740 copying build/lib.linux-armv7l-cpython-311/skbio/stats/_misc.py -> build/bdist.linux-armv7l/wheel/skbio/stats 2023-09-26T12:30:54,742 copying build/lib.linux-armv7l-cpython-311/skbio/stats/gradient.py -> build/bdist.linux-armv7l/wheel/skbio/stats 2023-09-26T12:30:54,745 creating build/bdist.linux-armv7l/wheel/skbio/stats/tests 2023-09-26T12:30:54,746 copying build/lib.linux-armv7l-cpython-311/skbio/stats/tests/test_misc.py -> build/bdist.linux-armv7l/wheel/skbio/stats/tests 2023-09-26T12:30:54,748 copying build/lib.linux-armv7l-cpython-311/skbio/stats/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/tests 2023-09-26T12:30:54,749 copying build/lib.linux-armv7l-cpython-311/skbio/stats/tests/test_composition.py -> build/bdist.linux-armv7l/wheel/skbio/stats/tests 2023-09-26T12:30:54,752 copying build/lib.linux-armv7l-cpython-311/skbio/stats/tests/test_gradient.py -> build/bdist.linux-armv7l/wheel/skbio/stats/tests 2023-09-26T12:30:54,755 copying build/lib.linux-armv7l-cpython-311/skbio/stats/tests/test_subsample.py -> build/bdist.linux-armv7l/wheel/skbio/stats/tests 2023-09-26T12:30:54,758 copying build/lib.linux-armv7l-cpython-311/skbio/stats/tests/test_power.py -> build/bdist.linux-armv7l/wheel/skbio/stats/tests 2023-09-26T12:30:54,760 creating build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2023-09-26T12:30:54,761 copying build/lib.linux-armv7l-cpython-311/skbio/stats/tests/data/vr_raw -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2023-09-26T12:30:54,763 copying build/lib.linux-armv7l-cpython-311/skbio/stats/tests/data/vr_real_raw -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2023-09-26T12:30:54,764 copying build/lib.linux-armv7l-cpython-311/skbio/stats/tests/data/cr_no_data_raw -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2023-09-26T12:30:54,766 copying build/lib.linux-armv7l-cpython-311/skbio/stats/tests/data/cr_data_out -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2023-09-26T12:30:54,767 copying build/lib.linux-armv7l-cpython-311/skbio/stats/tests/data/gr_wo_msg_out -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2023-09-26T12:30:54,769 copying build/lib.linux-armv7l-cpython-311/skbio/stats/tests/data/gr_w_msg_raw -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2023-09-26T12:30:54,771 copying build/lib.linux-armv7l-cpython-311/skbio/stats/tests/data/gr_wo_msg_raw -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2023-09-26T12:30:54,772 copying build/lib.linux-armv7l-cpython-311/skbio/stats/tests/data/vr_real_out -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2023-09-26T12:30:54,774 copying build/lib.linux-armv7l-cpython-311/skbio/stats/tests/data/gr_w_msg_out -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2023-09-26T12:30:54,776 copying build/lib.linux-armv7l-cpython-311/skbio/stats/tests/data/cr_data_raw -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2023-09-26T12:30:54,777 copying build/lib.linux-armv7l-cpython-311/skbio/stats/tests/data/cr_no_data_out -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2023-09-26T12:30:54,779 copying build/lib.linux-armv7l-cpython-311/skbio/stats/tests/data/vr_out -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2023-09-26T12:30:54,781 creating build/bdist.linux-armv7l/wheel/skbio/io 2023-09-26T12:30:54,782 copying build/lib.linux-armv7l-cpython-311/skbio/io/_exception.py -> build/bdist.linux-armv7l/wheel/skbio/io 2023-09-26T12:30:54,784 copying build/lib.linux-armv7l-cpython-311/skbio/io/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/io 2023-09-26T12:30:54,786 copying build/lib.linux-armv7l-cpython-311/skbio/io/_warning.py -> build/bdist.linux-armv7l/wheel/skbio/io 2023-09-26T12:30:54,788 copying build/lib.linux-armv7l-cpython-311/skbio/io/_iosources.py -> build/bdist.linux-armv7l/wheel/skbio/io 2023-09-26T12:30:54,791 creating build/bdist.linux-armv7l/wheel/skbio/io/format 2023-09-26T12:30:54,792 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-09-26T12:30:54,794 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/gff3.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-09-26T12:30:54,796 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/binary_dm.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-09-26T12:30:54,798 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/taxdump.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-09-26T12:30:54,801 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/ordination.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-09-26T12:30:54,803 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/_base.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-09-26T12:30:54,805 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/blast6.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-09-26T12:30:54,807 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/_sequence_feature_vocabulary.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-09-26T12:30:54,810 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/fasta.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-09-26T12:30:54,813 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/phylip.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-09-26T12:30:54,815 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/genbank.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-09-26T12:30:54,817 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/fastq.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-09-26T12:30:54,820 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/lsmat.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-09-26T12:30:54,823 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/newick.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-09-26T12:30:54,825 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/blast7.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-09-26T12:30:54,827 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/stockholm.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-09-26T12:30:54,830 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/clustal.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-09-26T12:30:54,832 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/_blast.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-09-26T12:30:54,834 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/embl.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-09-26T12:30:54,837 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/qseq.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-09-26T12:30:54,840 creating build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-09-26T12:30:54,841 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/test_clustal.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-09-26T12:30:54,843 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-09-26T12:30:54,845 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/test_lsmat.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-09-26T12:30:54,847 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/test_genbank.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-09-26T12:30:54,849 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/test_newick.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-09-26T12:30:54,852 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/test_blast6.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-09-26T12:30:54,854 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/test_taxdump.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-09-26T12:30:54,856 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/test_stockholm.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-09-26T12:30:54,859 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/test_fastq.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-09-26T12:30:54,862 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/test_sequence_feature_vocabulary.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-09-26T12:30:54,864 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/test_base.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-09-26T12:30:54,866 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/test_gff3.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-09-26T12:30:54,869 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/test_binary_dm.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-09-26T12:30:54,871 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/test_fasta.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-09-26T12:30:54,874 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/test_phylip.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-09-26T12:30:54,876 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/test_ordination.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-09-26T12:30:54,878 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/test_qseq.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-09-26T12:30:54,880 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/test_emptyfile.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-09-26T12:30:54,882 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/test_embl.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-09-26T12:30:54,885 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/test_blast7.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2023-09-26T12:30:54,892 creating build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,893 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_6_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,895 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_blank_lines_between_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,897 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_single_prot_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,898 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_id_whitespace_replacement_empty_str -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,900 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_multi_seq_roundtrip -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,902 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_error7 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,903 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_multi_whitespace_stripping -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,905 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_description_newline_replacement_empty_str -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,907 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_invalid_nonexistent_gs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,908 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/error_qual_del.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,910 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_invalid_missing_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,912 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_single_dna_seq_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,913 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_different_padding -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,915 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_error20 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,917 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/longreads_as_illumina.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,919 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_invalid_nonexistent_gr -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,921 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_multi_blank_end_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,923 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/error_trunc_in_plus.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,924 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/phylip_invalid_seq_too_long -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,926 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_3_seqs_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,927 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_multi_blank_between_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,929 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/legacy9_invalid_too_many_columns -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,931 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/error_no_qual.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,932 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_error10 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,934 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_multi_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,935 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_single_bio_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,937 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/misc_dna_as_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,939 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/taxdump_names.dmp -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,940 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_multiple_multi_line_trees -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,942 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qseq_multi_seq_illumina1.3 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,943 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_description_newline_replacement_multi_char -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,945 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_single_bio_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,947 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_invalid_whitespace_only_sequence -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,948 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/embl_multi_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,951 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_wrapping_as_sanger_no_description -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,952 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/error_long_qual.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,954 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/blast6_custom_single_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,956 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/error_qual_null.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,957 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_3_seqs_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,959 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_blank_lines -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,961 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/embl_w_beginning_whitespace -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,962 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/misc_dna_original_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,964 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_error8 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,966 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_invalid_missing_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,967 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_runon_gf_no_whitespace -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,969 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_multiple_references -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,970 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_error13 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,972 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_description_newline_replacement_none -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,974 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_missing_rn_tag -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,976 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/error_qual_space.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,977 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_id_whitespace_replacement_empty_str -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,979 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_rna -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,981 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_example2_scores -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,983 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_invalid_blank_line_within_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,985 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_5_ws_lines_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,986 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/gff3_bad_missing_directive -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,988 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_id_whitespace_replacement_none -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,990 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/error_qual_tab.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,992 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/misc_rna_original_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,993 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_ws_lines_end_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,995 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_invalid_blank_line_after_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,997 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qseq_invalid_x -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:54,999 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/longreads_original_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,001 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_error17 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,003 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_invalid_qual_scores_string -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,005 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_invalid_blank_after_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,006 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qseq_invalid_filter -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,008 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_wrapping_as_illumina_no_description -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,010 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_invalid_blank_within_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,011 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_single_nuc_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,013 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_missing_footer -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,015 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/blast7_default_single_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,017 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_whitespace_only_lines -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,018 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/illumina_full_range_as_illumina.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,020 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_error14 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,022 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_invalid_blank_after_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,023 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_no_data -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,025 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_6_ws_lines_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,027 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/genbank_single_record_upper -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,029 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_tabular_msa_different_type -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,030 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site_constraints -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,032 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_duplicate_gc -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,034 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/blast7_custom_mixed_nans -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,035 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/error_trunc_in_title.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,037 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_max_width_1 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,038 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_single_dna_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,040 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/genbank_w_beginning_whitespace -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,042 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/genbank_6_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,043 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qseq_invalid_y -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,045 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/error_double_seq.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,046 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_blanks_end_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,048 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/phylip_invalid_seq_too_short -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,050 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_malformed_gf_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,052 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_invalid_ws_line_within_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,053 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_ws_lines_between_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,055 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/phylip_whitespace_in_header_1 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,057 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/blast7_default_multi_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,058 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_5_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,060 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_runon_gf_with_whitespace -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,062 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_5_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,063 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_multi_seq_sanger -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,065 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/embl_single_record_simple -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,067 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_runon_references_mixed -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,068 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_5_ws_lines_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,070 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/wrapping_as_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,072 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/legacy9_mixed_nans -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,073 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_invalid_blank_sequence -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,075 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_3_seqs_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,077 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_description_newline_replacement_none -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,078 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_error21 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,080 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_exp_Ordination_RDA_species -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,081 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_invalid_ws_line_after_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,083 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/genbank_5_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,085 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_single_prot_seq_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,086 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_invalid_missing_seq_data -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,088 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_missing_reference_items -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,090 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qseq_invalid_read -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,091 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/phylip_dna_3_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,093 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_error4 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,095 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_id_whitespace_replacement_multi_char -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,097 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_single_seq_illumina1.8 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,099 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/legacy9_invalid_differing_fields -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,100 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/legacy9_multi_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,102 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/blast6_custom_mixed_nans -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,104 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_invalid_missing_qual_scores_middle -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,106 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/embl_uniprot_record -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,108 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/error_short_qual.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,112 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_single_tree_without_id -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,113 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_invalid_blank_line_after_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,115 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_error9 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,117 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_invalid_qual_scores_over_255 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,118 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_malformed_gr_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,120 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/legacy9_single_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,121 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_invalid_missing_seq_data_middle -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,123 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_L&L_CA_data_scores -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,125 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/solexa_full_range_original_solexa.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,126 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_PCoA_sample_data_3_scores -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,128 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/sanger_full_range_as_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,130 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_invalid_missing_qual_scores_first -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,131 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/blast6_invalid_type_in_column -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,133 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_single_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,135 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_blanks_end_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,137 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_description_newline_replacement_empty_str -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,138 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/blast6_invalid_column_types -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,140 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/longreads_as_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,142 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_malformed_data_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,144 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/phylip_invalid_empty_line_after_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,146 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/phylip_two_chunks -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,148 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_id_whitespace_replacement_none -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,149 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_description_newline_replacement_multi_char -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,151 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_single_rna_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,153 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_invalid_qual_scores_negative -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,154 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/blast6_custom_minimal -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,156 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/gff3_multi_record -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,157 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_multi_line_tree_with_id -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,159 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_error19 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,161 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/blast7_invalid_unrecognized_field -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,162 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_all_data_types -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,164 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,166 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/embl_single_record_lower -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,168 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_blank_lines -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,169 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_multi_ws_lines_end_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,171 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_3_seqs_defaults_length_mismatch -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,172 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/phylip_invalid_zero_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,174 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/wrapping_as_illumina.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,176 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/error_trunc_at_qual.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,178 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_multi_ws_lines_between_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,179 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_runon_gs_no_whitespace -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,181 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/genbank_single_record -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,183 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/phylip_invalid_empty_line_before_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,185 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_invalid_missing_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,186 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/phylip_whitespace_in_header_2 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,188 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/illumina_full_range_as_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,190 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/error_diff_ids.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,191 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_invalid_legacy_format -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,193 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_3_seqs_defaults_extra -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,195 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/legacy9_and_blast7_default -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,197 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_max_width_5 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,199 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_malformed_gs_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,200 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/phylip_invalid_too_many_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,202 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_invalid_blank_after_plus -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,204 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/gff3_dna -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,205 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_max_width_5 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,207 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_writer_illumina1.3_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,209 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/error_trunc_in_qual.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,210 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_error24 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,212 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_3_seqs_defaults_desc_mismatch -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,214 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_multi_seq_roundtrip -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,216 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/illumina_full_range_original_illumina.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,218 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_invalid_whitespace_line_after_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,219 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/phylip_invalid_no_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,221 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/blast6_invalid_number_of_columns -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,223 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_invalid_data_type -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,225 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_mixed_qual_scores -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,226 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/misc_rna_as_illumina.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,228 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_error12 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,230 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_error3 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,232 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_writer_sanger_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,234 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/phylip_invalid_zero_seq_len -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,235 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_single_reference -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,237 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_nonstring_labels -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,238 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_multiple_trees -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,240 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_ws_lines_between_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,242 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_malformed_gc_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,244 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_error2 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,246 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/genbank_single_record_lower -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,247 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/gff3_bad_wrong_columns -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,249 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_wrapping_original_sanger_no_description -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,251 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_id_whitespace_replacement_multi_char -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,252 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_duplicate_sequence_names -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,254 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_differing_gc_data_length -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,256 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_invalid_blank_sequence -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,258 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/blast7_invalid_differing_fields -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,259 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/phylip_invalid_too_few_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,261 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_invalid_blank_in_seq_at_symbol -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,263 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/error_qual_unit_sep.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,265 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_3_seqs_defaults_id_mismatch -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,266 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/phylip_single_seq_long -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,268 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/blast7_invalid_no_data -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,270 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_invalid_legacy_format -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,271 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_invalid_blank_within_qual -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,273 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_6_ws_lines_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,274 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_invalid_whitespace_line_in_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,276 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_invalid_ws_line_after_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,278 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/empty -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,279 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/blast7_custom_single_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,281 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_exp_Ordination_PCoA_site -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,283 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/embl_feature_level_record_no_FT -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,285 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_invalid_missing_seq_data_last -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,286 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/sanger_full_range_original_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,288 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/error_trunc_in_seq.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,290 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_extensive_mixed -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,292 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_minimal -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,293 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_blank_lines_between_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,295 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_3_seqs_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,297 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_exp_Ordination_CCA_species -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,299 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_multiple_msa -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,301 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_differing_seq_lengths -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,302 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_invalid_missing_qual_scores_last -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,304 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_error5 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,306 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/phylip_varied_whitespace_in_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,308 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/blast7_invalid_for_sniffer_2 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,309 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/sanger_full_range_as_illumina.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,311 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_single_rna_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,313 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_single_rna_seq_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,314 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/error_spaces.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,316 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_error15 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,318 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/tsv_8_fields -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,320 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_single_dna_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,321 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_invalid_ws_line_after_plus -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,323 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_error6 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,325 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_prot_seqs_odd_labels -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,327 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_tabular_msa_different_type -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,329 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_duplicate_gr -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,330 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_extensive -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,332 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/error_tabs.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,334 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_single_bio_seq_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,335 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_error11 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,338 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_differing_gr_data_length -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,339 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_example3_scores -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,342 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_single_tree_with_id -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,343 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/error_trunc_at_plus.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,345 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/phylip_invalid_header_too_short -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,346 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/phylip_invalid_empty_line_between_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,348 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site_constraints -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,350 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qseq_invalid_lane -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,352 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_5_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,353 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_5_ws_lines_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,355 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_error18 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,357 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_multi_ws_lines_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,359 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_10_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,360 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_6_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,362 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_writer_sanger_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,364 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_invalid_whitespace_only_line_within_sequence -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,365 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_multi_line_tree_no_id -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,367 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_duplicate_tree_ids -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,369 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/embl_constructed -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,370 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_invalid_after_10_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,372 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,374 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_error1 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,376 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/embl_single_record_upper -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,378 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_multi_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,379 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/embl_feature_level_record -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,381 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_whitespace_only_lines -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,383 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_ws_lines_end_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,385 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_2_seqs_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,386 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_invalid_ws_line_within_qual -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,388 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_error22 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,389 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/blast6_custom_multi_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,391 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_missing_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,393 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/phylip_whitespace_in_header_3 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,394 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_invalid_ws_line_after_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,396 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_invalid_whitespace_only_sequence -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,398 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/blast7_custom_multi_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,400 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/tsv_10_fields -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,402 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_two_of_each_metadata -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,403 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_error23 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,405 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/blast6_default_single_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,407 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/blast7_invalid_too_many_columns -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,409 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/phylip_single_seq_short -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,410 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_single_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,412 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/gff3_single_record -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,414 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/blast7_invalid_gibberish -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,416 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/wrapping_original_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,417 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/blast7_custom_minimal -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,419 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_metadata_only -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,420 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_single_seq_illumina1.3 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,422 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/taxdump_nodes.dmp -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,424 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qseq_invalid_tile -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,425 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_single_prot_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,427 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qseq_single_seq_sanger -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,429 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/blast7_invalid_for_sniffer -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,430 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/blast6_default_multi_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,432 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/misc_rna_as_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,434 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_data_only -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,436 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_invalid_missing_seq_data_first -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,437 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_prot_seqs_odd_labels -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,439 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/genbank_missing_locus_name -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,441 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_runon_gs_with_whitespace -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,442 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/phylip_variable_length_ids -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,445 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/whitespace_only -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,447 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/ordination_error16 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,449 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/error_qual_escape.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,451 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_max_width_1 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,453 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/phylip_invalid_header_too_long -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,455 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/error_qual_vtab.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,456 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/qual_invalid_qual_scores_float -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,458 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fastq_multi_blank_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,460 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/stockholm_runon_references -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,461 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/genbank_multi_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,463 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/fasta_invalid_blank_line_within_sequence -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,465 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/embl_single_record -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,467 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/misc_dna_as_illumina.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,469 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/error_double_qual.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,470 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/tests/data/error_trunc_at_seq.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2023-09-26T12:30:55,472 copying build/lib.linux-armv7l-cpython-311/skbio/io/format/emptyfile.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2023-09-26T12:30:55,474 copying build/lib.linux-armv7l-cpython-311/skbio/io/util.py -> build/bdist.linux-armv7l/wheel/skbio/io 2023-09-26T12:30:55,476 copying build/lib.linux-armv7l-cpython-311/skbio/io/registry.py -> build/bdist.linux-armv7l/wheel/skbio/io 2023-09-26T12:30:55,479 copying build/lib.linux-armv7l-cpython-311/skbio/io/_fileobject.py -> build/bdist.linux-armv7l/wheel/skbio/io 2023-09-26T12:30:55,481 creating build/bdist.linux-armv7l/wheel/skbio/io/tests 2023-09-26T12:30:55,482 copying build/lib.linux-armv7l-cpython-311/skbio/io/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/io/tests 2023-09-26T12:30:55,484 copying build/lib.linux-armv7l-cpython-311/skbio/io/tests/test_iosources.py -> build/bdist.linux-armv7l/wheel/skbio/io/tests 2023-09-26T12:30:55,486 copying build/lib.linux-armv7l-cpython-311/skbio/io/tests/test_registry.py -> build/bdist.linux-armv7l/wheel/skbio/io/tests 2023-09-26T12:30:55,489 copying build/lib.linux-armv7l-cpython-311/skbio/io/tests/test_util.py -> build/bdist.linux-armv7l/wheel/skbio/io/tests 2023-09-26T12:30:55,492 creating build/bdist.linux-armv7l/wheel/skbio/io/tests/data 2023-09-26T12:30:55,493 copying build/lib.linux-armv7l-cpython-311/skbio/io/tests/data/example_file.bz2 -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data 2023-09-26T12:30:55,496 copying build/lib.linux-armv7l-cpython-311/skbio/io/tests/data/big5_file.gz -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data 2023-09-26T12:30:55,497 copying build/lib.linux-armv7l-cpython-311/skbio/io/tests/data/big5_file -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data 2023-09-26T12:30:55,499 copying build/lib.linux-armv7l-cpython-311/skbio/io/tests/data/example_file -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data 2023-09-26T12:30:55,501 copying build/lib.linux-armv7l-cpython-311/skbio/io/tests/data/example_file.gz -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data 2023-09-26T12:30:55,502 copying build/lib.linux-armv7l-cpython-311/skbio/io/tests/data/real_file -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data 2023-09-26T12:30:55,504 copying build/lib.linux-armv7l-cpython-311/skbio/io/tests/data/real_file_2 -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data 2023-09-26T12:30:55,506 copying build/lib.linux-armv7l-cpython-311/skbio/io/tests/data/big5_file.bz2 -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data 2023-09-26T12:30:55,508 creating build/bdist.linux-armv7l/wheel/skbio/tests 2023-09-26T12:30:55,509 copying build/lib.linux-armv7l-cpython-311/skbio/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/tests 2023-09-26T12:30:55,510 copying build/lib.linux-armv7l-cpython-311/skbio/tests/test_base.py -> build/bdist.linux-armv7l/wheel/skbio/tests 2023-09-26T12:30:55,512 copying build/lib.linux-armv7l-cpython-311/skbio/tests/test_workflow.py -> build/bdist.linux-armv7l/wheel/skbio/tests 2023-09-26T12:30:55,515 creating build/bdist.linux-armv7l/wheel/skbio/diversity 2023-09-26T12:30:55,516 creating build/bdist.linux-armv7l/wheel/skbio/diversity/beta 2023-09-26T12:30:55,517 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/beta/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta 2023-09-26T12:30:55,519 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/beta/_unifrac.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta 2023-09-26T12:30:55,522 creating build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests 2023-09-26T12:30:55,522 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/beta/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests 2023-09-26T12:30:55,524 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/beta/tests/test_unifrac.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests 2023-09-26T12:30:55,527 creating build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data 2023-09-26T12:30:55,529 creating build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt 2023-09-26T12:30:55,530 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/beta/tests/data/qiime-191-tt/tree.nwk -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt 2023-09-26T12:30:55,532 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/beta/tests/data/qiime-191-tt/weighted_unifrac_dm.txt -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt 2023-09-26T12:30:55,534 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/beta/tests/data/qiime-191-tt/weighted_normalized_unifrac_dm.txt -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt 2023-09-26T12:30:55,535 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/beta/tests/data/qiime-191-tt/README.md -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt 2023-09-26T12:30:55,537 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/beta/tests/data/qiime-191-tt/unweighted_unifrac_dm.txt -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt 2023-09-26T12:30:55,539 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/beta/tests/data/qiime-191-tt/otu-table.tsv -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt 2023-09-26T12:30:55,541 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/diversity 2023-09-26T12:30:55,544 creating build/bdist.linux-armv7l/wheel/skbio/diversity/alpha 2023-09-26T12:30:55,545 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha 2023-09-26T12:30:55,547 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/_chao1.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha 2023-09-26T12:30:55,549 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/_faith_pd.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha 2023-09-26T12:30:55,551 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/_base.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha 2023-09-26T12:30:55,554 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/_lladser.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha 2023-09-26T12:30:55,557 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/_gini.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha 2023-09-26T12:30:55,558 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/_ace.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha 2023-09-26T12:30:55,561 creating build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests 2023-09-26T12:30:55,562 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests 2023-09-26T12:30:55,563 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/tests/test_gini.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests 2023-09-26T12:30:55,565 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/tests/test_chao1.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests 2023-09-26T12:30:55,567 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/tests/test_lladser.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests 2023-09-26T12:30:55,569 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/tests/test_base.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests 2023-09-26T12:30:55,571 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/tests/test_faith_pd.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests 2023-09-26T12:30:55,573 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/tests/test_ace.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests 2023-09-26T12:30:55,576 creating build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data 2023-09-26T12:30:55,577 creating build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt 2023-09-26T12:30:55,578 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/tests/data/qiime-191-tt/faith-pd.txt -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt 2023-09-26T12:30:55,580 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/tests/data/qiime-191-tt/tree.nwk -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt 2023-09-26T12:30:55,581 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/tests/data/qiime-191-tt/README.md -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt 2023-09-26T12:30:55,583 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/alpha/tests/data/qiime-191-tt/otu-table.tsv -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt 2023-09-26T12:30:55,585 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/_phylogenetic.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/skbio/diversity 2023-09-26T12:30:55,592 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/_block.py -> build/bdist.linux-armv7l/wheel/skbio/diversity 2023-09-26T12:30:55,594 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/_driver.py -> build/bdist.linux-armv7l/wheel/skbio/diversity 2023-09-26T12:30:55,597 creating build/bdist.linux-armv7l/wheel/skbio/diversity/tests 2023-09-26T12:30:55,598 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/tests 2023-09-26T12:30:55,600 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/tests/test_block.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/tests 2023-09-26T12:30:55,602 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/tests/test_util.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/tests 2023-09-26T12:30:55,604 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/tests/test_driver.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/tests 2023-09-26T12:30:55,607 copying build/lib.linux-armv7l-cpython-311/skbio/diversity/_util.py -> build/bdist.linux-armv7l/wheel/skbio/diversity 2023-09-26T12:30:55,609 running install_egg_info 2023-09-26T12:30:55,621 running egg_info 2023-09-26T12:30:55,626 writing scikit_bio.egg-info/PKG-INFO 2023-09-26T12:30:55,629 writing dependency_links to scikit_bio.egg-info/dependency_links.txt 2023-09-26T12:30:55,631 writing requirements to scikit_bio.egg-info/requires.txt 2023-09-26T12:30:55,632 writing top-level names to scikit_bio.egg-info/top_level.txt 2023-09-26T12:30:55,766 reading manifest file 'scikit_bio.egg-info/SOURCES.txt' 2023-09-26T12:30:55,791 reading manifest template 'MANIFEST.in' 2023-09-26T12:30:55,829 no previously-included directories found matching 'doc/build' 2023-09-26T12:30:55,831 no previously-included directories found matching 'doc/source/generated' 2023-09-26T12:30:55,836 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2023-09-26T12:30:55,841 warning: no previously-included files matching '*.pyo' found anywhere in distribution 2023-09-26T12:30:55,846 warning: no previously-included files matching '*.so' found anywhere in distribution 2023-09-26T12:30:55,850 warning: no previously-included files matching '.*.swp' found anywhere in distribution 2023-09-26T12:30:55,854 warning: no previously-included files matching '.coverage' found anywhere in distribution 2023-09-26T12:30:55,855 adding license file 'LICENSE.txt' 2023-09-26T12:30:55,893 writing manifest file 'scikit_bio.egg-info/SOURCES.txt' 2023-09-26T12:30:55,896 Copying scikit_bio.egg-info to build/bdist.linux-armv7l/wheel/scikit_bio-0.5.9-py3.11.egg-info 2023-09-26T12:30:55,906 running install_scripts 2023-09-26T12:30:55,959 creating build/bdist.linux-armv7l/wheel/scikit_bio-0.5.9.dist-info/WHEEL 2023-09-26T12:30:55,961 creating '/tmp/pip-wheel-u2jwcf7s/.tmp-6gohby48/scikit_bio-0.5.9-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-09-26T12:30:55,965 adding 'skbio/__init__.py' 2023-09-26T12:30:55,966 adding 'skbio/_base.py' 2023-09-26T12:30:55,967 adding 'skbio/test.py' 2023-09-26T12:30:55,970 adding 'skbio/workflow.py' 2023-09-26T12:30:55,972 adding 'skbio/alignment/__init__.py' 2023-09-26T12:30:55,974 adding 'skbio/alignment/_indexing.py' 2023-09-26T12:30:55,979 adding 'skbio/alignment/_pairwise.py' 2023-09-26T12:30:55,981 adding 'skbio/alignment/_repr.py' 2023-09-26T12:30:56,129 adding 'skbio/alignment/_ssw_wrapper.cpython-311-arm-linux-gnueabihf.so' 2023-09-26T12:30:56,143 adding 'skbio/alignment/_tabular_msa.py' 2023-09-26T12:30:56,146 adding 'skbio/alignment/_lib/__init__.py' 2023-09-26T12:30:56,147 adding 'skbio/alignment/tests/__init__.py' 2023-09-26T12:30:56,150 adding 'skbio/alignment/tests/test_pairwise.py' 2023-09-26T12:30:56,153 adding 'skbio/alignment/tests/test_ssw.py' 2023-09-26T12:30:56,164 adding 'skbio/alignment/tests/test_tabular_msa.py' 2023-09-26T12:30:56,168 adding 'skbio/diversity/__init__.py' 2023-09-26T12:30:56,170 adding 'skbio/diversity/_block.py' 2023-09-26T12:30:56,173 adding 'skbio/diversity/_driver.py' 2023-09-26T12:30:56,230 adding 'skbio/diversity/_phylogenetic.cpython-311-arm-linux-gnueabihf.so' 2023-09-26T12:30:56,234 adding 'skbio/diversity/_util.py' 2023-09-26T12:30:56,236 adding 'skbio/diversity/alpha/__init__.py' 2023-09-26T12:30:56,238 adding 'skbio/diversity/alpha/_ace.py' 2023-09-26T12:30:56,241 adding 'skbio/diversity/alpha/_base.py' 2023-09-26T12:30:56,242 adding 'skbio/diversity/alpha/_chao1.py' 2023-09-26T12:30:56,244 adding 'skbio/diversity/alpha/_faith_pd.py' 2023-09-26T12:30:56,246 adding 'skbio/diversity/alpha/_gini.py' 2023-09-26T12:30:56,248 adding 'skbio/diversity/alpha/_lladser.py' 2023-09-26T12:30:56,250 adding 'skbio/diversity/alpha/tests/__init__.py' 2023-09-26T12:30:56,252 adding 'skbio/diversity/alpha/tests/test_ace.py' 2023-09-26T12:30:56,254 adding 'skbio/diversity/alpha/tests/test_base.py' 2023-09-26T12:30:56,255 adding 'skbio/diversity/alpha/tests/test_chao1.py' 2023-09-26T12:30:56,257 adding 'skbio/diversity/alpha/tests/test_faith_pd.py' 2023-09-26T12:30:56,258 adding 'skbio/diversity/alpha/tests/test_gini.py' 2023-09-26T12:30:56,260 adding 'skbio/diversity/alpha/tests/test_lladser.py' 2023-09-26T12:30:56,262 adding 'skbio/diversity/alpha/tests/data/qiime-191-tt/README.md' 2023-09-26T12:30:56,263 adding 'skbio/diversity/alpha/tests/data/qiime-191-tt/faith-pd.txt' 2023-09-26T12:30:56,264 adding 'skbio/diversity/alpha/tests/data/qiime-191-tt/otu-table.tsv' 2023-09-26T12:30:56,265 adding 'skbio/diversity/alpha/tests/data/qiime-191-tt/tree.nwk' 2023-09-26T12:30:56,267 adding 'skbio/diversity/beta/__init__.py' 2023-09-26T12:30:56,269 adding 'skbio/diversity/beta/_unifrac.py' 2023-09-26T12:30:56,271 adding 'skbio/diversity/beta/tests/__init__.py' 2023-09-26T12:30:56,273 adding 'skbio/diversity/beta/tests/test_unifrac.py' 2023-09-26T12:30:56,276 adding 'skbio/diversity/beta/tests/data/qiime-191-tt/README.md' 2023-09-26T12:30:56,277 adding 'skbio/diversity/beta/tests/data/qiime-191-tt/otu-table.tsv' 2023-09-26T12:30:56,278 adding 'skbio/diversity/beta/tests/data/qiime-191-tt/tree.nwk' 2023-09-26T12:30:56,279 adding 'skbio/diversity/beta/tests/data/qiime-191-tt/unweighted_unifrac_dm.txt' 2023-09-26T12:30:56,280 adding 'skbio/diversity/beta/tests/data/qiime-191-tt/weighted_normalized_unifrac_dm.txt' 2023-09-26T12:30:56,282 adding 'skbio/diversity/beta/tests/data/qiime-191-tt/weighted_unifrac_dm.txt' 2023-09-26T12:30:56,283 adding 'skbio/diversity/tests/__init__.py' 2023-09-26T12:30:56,285 adding 'skbio/diversity/tests/test_block.py' 2023-09-26T12:30:56,287 adding 'skbio/diversity/tests/test_driver.py' 2023-09-26T12:30:56,289 adding 'skbio/diversity/tests/test_util.py' 2023-09-26T12:30:56,291 adding 'skbio/io/__init__.py' 2023-09-26T12:30:56,293 adding 'skbio/io/_exception.py' 2023-09-26T12:30:56,294 adding 'skbio/io/_fileobject.py' 2023-09-26T12:30:56,296 adding 'skbio/io/_iosources.py' 2023-09-26T12:30:56,297 adding 'skbio/io/_warning.py' 2023-09-26T12:30:56,302 adding 'skbio/io/registry.py' 2023-09-26T12:30:56,304 adding 'skbio/io/util.py' 2023-09-26T12:30:56,306 adding 'skbio/io/format/__init__.py' 2023-09-26T12:30:56,308 adding 'skbio/io/format/_base.py' 2023-09-26T12:30:56,309 adding 'skbio/io/format/_blast.py' 2023-09-26T12:30:56,311 adding 'skbio/io/format/_sequence_feature_vocabulary.py' 2023-09-26T12:30:56,313 adding 'skbio/io/format/binary_dm.py' 2023-09-26T12:30:56,315 adding 'skbio/io/format/blast6.py' 2023-09-26T12:30:56,317 adding 'skbio/io/format/blast7.py' 2023-09-26T12:30:56,319 adding 'skbio/io/format/clustal.py' 2023-09-26T12:30:56,326 adding 'skbio/io/format/embl.py' 2023-09-26T12:30:56,327 adding 'skbio/io/format/emptyfile.py' 2023-09-26T12:30:56,331 adding 'skbio/io/format/fasta.py' 2023-09-26T12:30:56,334 adding 'skbio/io/format/fastq.py' 2023-09-26T12:30:56,337 adding 'skbio/io/format/genbank.py' 2023-09-26T12:30:56,340 adding 'skbio/io/format/gff3.py' 2023-09-26T12:30:56,342 adding 'skbio/io/format/lsmat.py' 2023-09-26T12:30:56,345 adding 'skbio/io/format/newick.py' 2023-09-26T12:30:56,347 adding 'skbio/io/format/ordination.py' 2023-09-26T12:30:56,349 adding 'skbio/io/format/phylip.py' 2023-09-26T12:30:56,351 adding 'skbio/io/format/qseq.py' 2023-09-26T12:30:56,355 adding 'skbio/io/format/stockholm.py' 2023-09-26T12:30:56,357 adding 'skbio/io/format/taxdump.py' 2023-09-26T12:30:56,358 adding 'skbio/io/format/tests/__init__.py' 2023-09-26T12:30:56,360 adding 'skbio/io/format/tests/test_base.py' 2023-09-26T12:30:56,362 adding 'skbio/io/format/tests/test_binary_dm.py' 2023-09-26T12:30:56,363 adding 'skbio/io/format/tests/test_blast6.py' 2023-09-26T12:30:56,365 adding 'skbio/io/format/tests/test_blast7.py' 2023-09-26T12:30:56,367 adding 'skbio/io/format/tests/test_clustal.py' 2023-09-26T12:30:56,370 adding 'skbio/io/format/tests/test_embl.py' 2023-09-26T12:30:56,371 adding 'skbio/io/format/tests/test_emptyfile.py' 2023-09-26T12:30:56,376 adding 'skbio/io/format/tests/test_fasta.py' 2023-09-26T12:30:56,378 adding 'skbio/io/format/tests/test_fastq.py' 2023-09-26T12:30:56,380 adding 'skbio/io/format/tests/test_genbank.py' 2023-09-26T12:30:56,382 adding 'skbio/io/format/tests/test_gff3.py' 2023-09-26T12:30:56,384 adding 'skbio/io/format/tests/test_lsmat.py' 2023-09-26T12:30:56,386 adding 'skbio/io/format/tests/test_newick.py' 2023-09-26T12:30:56,387 adding 'skbio/io/format/tests/test_ordination.py' 2023-09-26T12:30:56,389 adding 'skbio/io/format/tests/test_phylip.py' 2023-09-26T12:30:56,390 adding 'skbio/io/format/tests/test_qseq.py' 2023-09-26T12:30:56,392 adding 'skbio/io/format/tests/test_sequence_feature_vocabulary.py' 2023-09-26T12:30:56,394 adding 'skbio/io/format/tests/test_stockholm.py' 2023-09-26T12:30:56,396 adding 'skbio/io/format/tests/test_taxdump.py' 2023-09-26T12:30:56,403 adding 'skbio/io/format/tests/data/blast6_custom_minimal' 2023-09-26T12:30:56,404 adding 'skbio/io/format/tests/data/blast6_custom_mixed_nans' 2023-09-26T12:30:56,405 adding 'skbio/io/format/tests/data/blast6_custom_multi_line' 2023-09-26T12:30:56,407 adding 'skbio/io/format/tests/data/blast6_custom_single_line' 2023-09-26T12:30:56,408 adding 'skbio/io/format/tests/data/blast6_default_multi_line' 2023-09-26T12:30:56,409 adding 'skbio/io/format/tests/data/blast6_default_single_line' 2023-09-26T12:30:56,410 adding 'skbio/io/format/tests/data/blast6_invalid_column_types' 2023-09-26T12:30:56,411 adding 'skbio/io/format/tests/data/blast6_invalid_number_of_columns' 2023-09-26T12:30:56,412 adding 'skbio/io/format/tests/data/blast6_invalid_type_in_column' 2023-09-26T12:30:56,413 adding 'skbio/io/format/tests/data/blast7_custom_minimal' 2023-09-26T12:30:56,414 adding 'skbio/io/format/tests/data/blast7_custom_mixed_nans' 2023-09-26T12:30:56,415 adding 'skbio/io/format/tests/data/blast7_custom_multi_line' 2023-09-26T12:30:56,416 adding 'skbio/io/format/tests/data/blast7_custom_single_line' 2023-09-26T12:30:56,418 adding 'skbio/io/format/tests/data/blast7_default_multi_line' 2023-09-26T12:30:56,419 adding 'skbio/io/format/tests/data/blast7_default_single_line' 2023-09-26T12:30:56,420 adding 'skbio/io/format/tests/data/blast7_invalid_differing_fields' 2023-09-26T12:30:56,421 adding 'skbio/io/format/tests/data/blast7_invalid_for_sniffer' 2023-09-26T12:30:56,422 adding 'skbio/io/format/tests/data/blast7_invalid_for_sniffer_2' 2023-09-26T12:30:56,423 adding 'skbio/io/format/tests/data/blast7_invalid_gibberish' 2023-09-26T12:30:56,424 adding 'skbio/io/format/tests/data/blast7_invalid_no_data' 2023-09-26T12:30:56,425 adding 'skbio/io/format/tests/data/blast7_invalid_too_many_columns' 2023-09-26T12:30:56,427 adding 'skbio/io/format/tests/data/blast7_invalid_unrecognized_field' 2023-09-26T12:30:56,428 adding 'skbio/io/format/tests/data/embl_constructed' 2023-09-26T12:30:56,429 adding 'skbio/io/format/tests/data/embl_feature_level_record' 2023-09-26T12:30:56,431 adding 'skbio/io/format/tests/data/embl_feature_level_record_no_FT' 2023-09-26T12:30:56,432 adding 'skbio/io/format/tests/data/embl_multi_records' 2023-09-26T12:30:56,434 adding 'skbio/io/format/tests/data/embl_single_record' 2023-09-26T12:30:56,435 adding 'skbio/io/format/tests/data/embl_single_record_lower' 2023-09-26T12:30:56,436 adding 'skbio/io/format/tests/data/embl_single_record_simple' 2023-09-26T12:30:56,437 adding 'skbio/io/format/tests/data/embl_single_record_upper' 2023-09-26T12:30:56,439 adding 'skbio/io/format/tests/data/embl_uniprot_record' 2023-09-26T12:30:56,440 adding 'skbio/io/format/tests/data/embl_w_beginning_whitespace' 2023-09-26T12:30:56,441 adding 'skbio/io/format/tests/data/empty' 2023-09-26T12:30:56,442 adding 'skbio/io/format/tests/data/error_diff_ids.fastq' 2023-09-26T12:30:56,443 adding 'skbio/io/format/tests/data/error_double_qual.fastq' 2023-09-26T12:30:56,445 adding 'skbio/io/format/tests/data/error_double_seq.fastq' 2023-09-26T12:30:56,446 adding 'skbio/io/format/tests/data/error_long_qual.fastq' 2023-09-26T12:30:56,447 adding 'skbio/io/format/tests/data/error_no_qual.fastq' 2023-09-26T12:30:56,449 adding 'skbio/io/format/tests/data/error_qual_del.fastq' 2023-09-26T12:30:56,450 adding 'skbio/io/format/tests/data/error_qual_escape.fastq' 2023-09-26T12:30:56,451 adding 'skbio/io/format/tests/data/error_qual_null.fastq' 2023-09-26T12:30:56,452 adding 'skbio/io/format/tests/data/error_qual_space.fastq' 2023-09-26T12:30:56,453 adding 'skbio/io/format/tests/data/error_qual_tab.fastq' 2023-09-26T12:30:56,454 adding 'skbio/io/format/tests/data/error_qual_unit_sep.fastq' 2023-09-26T12:30:56,455 adding 'skbio/io/format/tests/data/error_qual_vtab.fastq' 2023-09-26T12:30:56,456 adding 'skbio/io/format/tests/data/error_short_qual.fastq' 2023-09-26T12:30:56,457 adding 'skbio/io/format/tests/data/error_spaces.fastq' 2023-09-26T12:30:56,458 adding 'skbio/io/format/tests/data/error_tabs.fastq' 2023-09-26T12:30:56,459 adding 'skbio/io/format/tests/data/error_trunc_at_plus.fastq' 2023-09-26T12:30:56,460 adding 'skbio/io/format/tests/data/error_trunc_at_qual.fastq' 2023-09-26T12:30:56,461 adding 'skbio/io/format/tests/data/error_trunc_at_seq.fastq' 2023-09-26T12:30:56,462 adding 'skbio/io/format/tests/data/error_trunc_in_plus.fastq' 2023-09-26T12:30:56,464 adding 'skbio/io/format/tests/data/error_trunc_in_qual.fastq' 2023-09-26T12:30:56,465 adding 'skbio/io/format/tests/data/error_trunc_in_seq.fastq' 2023-09-26T12:30:56,466 adding 'skbio/io/format/tests/data/error_trunc_in_title.fastq' 2023-09-26T12:30:56,467 adding 'skbio/io/format/tests/data/fasta_10_seqs' 2023-09-26T12:30:56,468 adding 'skbio/io/format/tests/data/fasta_3_seqs_defaults' 2023-09-26T12:30:56,469 adding 'skbio/io/format/tests/data/fasta_3_seqs_non_defaults' 2023-09-26T12:30:56,471 adding 'skbio/io/format/tests/data/fasta_5_blanks_start_of_file' 2023-09-26T12:30:56,472 adding 'skbio/io/format/tests/data/fasta_5_ws_lines_start_of_file' 2023-09-26T12:30:56,473 adding 'skbio/io/format/tests/data/fasta_6_blanks_start_of_file' 2023-09-26T12:30:56,474 adding 'skbio/io/format/tests/data/fasta_6_ws_lines_start_of_file' 2023-09-26T12:30:56,475 adding 'skbio/io/format/tests/data/fasta_blank_lines_between_records' 2023-09-26T12:30:56,476 adding 'skbio/io/format/tests/data/fasta_blanks_end_of_file' 2023-09-26T12:30:56,477 adding 'skbio/io/format/tests/data/fasta_description_newline_replacement_empty_str' 2023-09-26T12:30:56,478 adding 'skbio/io/format/tests/data/fasta_description_newline_replacement_multi_char' 2023-09-26T12:30:56,479 adding 'skbio/io/format/tests/data/fasta_description_newline_replacement_none' 2023-09-26T12:30:56,481 adding 'skbio/io/format/tests/data/fasta_id_whitespace_replacement_empty_str' 2023-09-26T12:30:56,482 adding 'skbio/io/format/tests/data/fasta_id_whitespace_replacement_multi_char' 2023-09-26T12:30:56,483 adding 'skbio/io/format/tests/data/fasta_id_whitespace_replacement_none' 2023-09-26T12:30:56,484 adding 'skbio/io/format/tests/data/fasta_invalid_after_10_seqs' 2023-09-26T12:30:56,485 adding 'skbio/io/format/tests/data/fasta_invalid_blank_line_after_header' 2023-09-26T12:30:56,486 adding 'skbio/io/format/tests/data/fasta_invalid_blank_line_within_sequence' 2023-09-26T12:30:56,487 adding 'skbio/io/format/tests/data/fasta_invalid_blank_sequence' 2023-09-26T12:30:56,488 adding 'skbio/io/format/tests/data/fasta_invalid_legacy_format' 2023-09-26T12:30:56,489 adding 'skbio/io/format/tests/data/fasta_invalid_missing_header' 2023-09-26T12:30:56,491 adding 'skbio/io/format/tests/data/fasta_invalid_missing_seq_data_first' 2023-09-26T12:30:56,492 adding 'skbio/io/format/tests/data/fasta_invalid_missing_seq_data_last' 2023-09-26T12:30:56,493 adding 'skbio/io/format/tests/data/fasta_invalid_missing_seq_data_middle' 2023-09-26T12:30:56,494 adding 'skbio/io/format/tests/data/fasta_invalid_whitespace_line_after_header' 2023-09-26T12:30:56,495 adding 'skbio/io/format/tests/data/fasta_invalid_whitespace_only_line_within_sequence' 2023-09-26T12:30:56,496 adding 'skbio/io/format/tests/data/fasta_invalid_whitespace_only_sequence' 2023-09-26T12:30:56,497 adding 'skbio/io/format/tests/data/fasta_max_width_1' 2023-09-26T12:30:56,498 adding 'skbio/io/format/tests/data/fasta_max_width_5' 2023-09-26T12:30:56,499 adding 'skbio/io/format/tests/data/fasta_mixed_qual_scores' 2023-09-26T12:30:56,500 adding 'skbio/io/format/tests/data/fasta_multi_seq' 2023-09-26T12:30:56,501 adding 'skbio/io/format/tests/data/fasta_multi_seq_roundtrip' 2023-09-26T12:30:56,502 adding 'skbio/io/format/tests/data/fasta_prot_seqs_odd_labels' 2023-09-26T12:30:56,503 adding 'skbio/io/format/tests/data/fasta_single_bio_seq_defaults' 2023-09-26T12:30:56,504 adding 'skbio/io/format/tests/data/fasta_single_bio_seq_non_defaults' 2023-09-26T12:30:56,505 adding 'skbio/io/format/tests/data/fasta_single_dna_seq_defaults' 2023-09-26T12:30:56,506 adding 'skbio/io/format/tests/data/fasta_single_dna_seq_non_defaults' 2023-09-26T12:30:56,507 adding 'skbio/io/format/tests/data/fasta_single_prot_seq_defaults' 2023-09-26T12:30:56,508 adding 'skbio/io/format/tests/data/fasta_single_prot_seq_non_defaults' 2023-09-26T12:30:56,509 adding 'skbio/io/format/tests/data/fasta_single_rna_seq_defaults' 2023-09-26T12:30:56,510 adding 'skbio/io/format/tests/data/fasta_single_rna_seq_non_defaults' 2023-09-26T12:30:56,511 adding 'skbio/io/format/tests/data/fasta_single_seq' 2023-09-26T12:30:56,512 adding 'skbio/io/format/tests/data/fasta_tabular_msa_different_type' 2023-09-26T12:30:56,513 adding 'skbio/io/format/tests/data/fasta_ws_lines_between_records' 2023-09-26T12:30:56,514 adding 'skbio/io/format/tests/data/fasta_ws_lines_end_of_file' 2023-09-26T12:30:56,515 adding 'skbio/io/format/tests/data/fastq_5_blanks_start_of_file' 2023-09-26T12:30:56,517 adding 'skbio/io/format/tests/data/fastq_5_ws_lines_start_of_file' 2023-09-26T12:30:56,518 adding 'skbio/io/format/tests/data/fastq_blank_lines' 2023-09-26T12:30:56,519 adding 'skbio/io/format/tests/data/fastq_invalid_blank_after_header' 2023-09-26T12:30:56,520 adding 'skbio/io/format/tests/data/fastq_invalid_blank_after_plus' 2023-09-26T12:30:56,521 adding 'skbio/io/format/tests/data/fastq_invalid_blank_after_seq' 2023-09-26T12:30:56,522 adding 'skbio/io/format/tests/data/fastq_invalid_blank_in_seq_at_symbol' 2023-09-26T12:30:56,523 adding 'skbio/io/format/tests/data/fastq_invalid_blank_within_qual' 2023-09-26T12:30:56,524 adding 'skbio/io/format/tests/data/fastq_invalid_blank_within_seq' 2023-09-26T12:30:56,525 adding 'skbio/io/format/tests/data/fastq_invalid_missing_header' 2023-09-26T12:30:56,526 adding 'skbio/io/format/tests/data/fastq_invalid_missing_seq_data' 2023-09-26T12:30:56,527 adding 'skbio/io/format/tests/data/fastq_invalid_ws_line_after_header' 2023-09-26T12:30:56,529 adding 'skbio/io/format/tests/data/fastq_invalid_ws_line_after_plus' 2023-09-26T12:30:56,530 adding 'skbio/io/format/tests/data/fastq_invalid_ws_line_after_seq' 2023-09-26T12:30:56,531 adding 'skbio/io/format/tests/data/fastq_invalid_ws_line_within_qual' 2023-09-26T12:30:56,532 adding 'skbio/io/format/tests/data/fastq_invalid_ws_line_within_seq' 2023-09-26T12:30:56,533 adding 'skbio/io/format/tests/data/fastq_multi_blank_between_records' 2023-09-26T12:30:56,534 adding 'skbio/io/format/tests/data/fastq_multi_blank_end_of_file' 2023-09-26T12:30:56,535 adding 'skbio/io/format/tests/data/fastq_multi_blank_start_of_file' 2023-09-26T12:30:56,536 adding 'skbio/io/format/tests/data/fastq_multi_seq_sanger' 2023-09-26T12:30:56,538 adding 'skbio/io/format/tests/data/fastq_multi_whitespace_stripping' 2023-09-26T12:30:56,539 adding 'skbio/io/format/tests/data/fastq_multi_ws_lines_between_records' 2023-09-26T12:30:56,540 adding 'skbio/io/format/tests/data/fastq_multi_ws_lines_end_of_file' 2023-09-26T12:30:56,541 adding 'skbio/io/format/tests/data/fastq_multi_ws_lines_start_of_file' 2023-09-26T12:30:56,542 adding 'skbio/io/format/tests/data/fastq_single_seq_illumina1.3' 2023-09-26T12:30:56,543 adding 'skbio/io/format/tests/data/fastq_single_seq_illumina1.8' 2023-09-26T12:30:56,544 adding 'skbio/io/format/tests/data/fastq_whitespace_only_lines' 2023-09-26T12:30:56,545 adding 'skbio/io/format/tests/data/fastq_wrapping_as_illumina_no_description' 2023-09-26T12:30:56,546 adding 'skbio/io/format/tests/data/fastq_wrapping_as_sanger_no_description' 2023-09-26T12:30:56,548 adding 'skbio/io/format/tests/data/fastq_wrapping_original_sanger_no_description' 2023-09-26T12:30:56,549 adding 'skbio/io/format/tests/data/fastq_writer_illumina1.3_defaults' 2023-09-26T12:30:56,550 adding 'skbio/io/format/tests/data/fastq_writer_sanger_defaults' 2023-09-26T12:30:56,550 adding 'skbio/io/format/tests/data/fastq_writer_sanger_non_defaults' 2023-09-26T12:30:56,552 adding 'skbio/io/format/tests/data/genbank_5_blanks_start_of_file' 2023-09-26T12:30:56,553 adding 'skbio/io/format/tests/data/genbank_6_blanks_start_of_file' 2023-09-26T12:30:56,554 adding 'skbio/io/format/tests/data/genbank_missing_locus_name' 2023-09-26T12:30:56,555 adding 'skbio/io/format/tests/data/genbank_multi_records' 2023-09-26T12:30:56,556 adding 'skbio/io/format/tests/data/genbank_single_record' 2023-09-26T12:30:56,557 adding 'skbio/io/format/tests/data/genbank_single_record_lower' 2023-09-26T12:30:56,558 adding 'skbio/io/format/tests/data/genbank_single_record_upper' 2023-09-26T12:30:56,559 adding 'skbio/io/format/tests/data/genbank_w_beginning_whitespace' 2023-09-26T12:30:56,560 adding 'skbio/io/format/tests/data/gff3_bad_missing_directive' 2023-09-26T12:30:56,562 adding 'skbio/io/format/tests/data/gff3_bad_wrong_columns' 2023-09-26T12:30:56,563 adding 'skbio/io/format/tests/data/gff3_dna' 2023-09-26T12:30:56,564 adding 'skbio/io/format/tests/data/gff3_multi_record' 2023-09-26T12:30:56,565 adding 'skbio/io/format/tests/data/gff3_single_record' 2023-09-26T12:30:56,566 adding 'skbio/io/format/tests/data/illumina_full_range_as_illumina.fastq' 2023-09-26T12:30:56,567 adding 'skbio/io/format/tests/data/illumina_full_range_as_sanger.fastq' 2023-09-26T12:30:56,568 adding 'skbio/io/format/tests/data/illumina_full_range_original_illumina.fastq' 2023-09-26T12:30:56,570 adding 'skbio/io/format/tests/data/legacy9_and_blast7_default' 2023-09-26T12:30:56,571 adding 'skbio/io/format/tests/data/legacy9_invalid_differing_fields' 2023-09-26T12:30:56,572 adding 'skbio/io/format/tests/data/legacy9_invalid_too_many_columns' 2023-09-26T12:30:56,573 adding 'skbio/io/format/tests/data/legacy9_mixed_nans' 2023-09-26T12:30:56,574 adding 'skbio/io/format/tests/data/legacy9_multi_line' 2023-09-26T12:30:56,576 adding 'skbio/io/format/tests/data/legacy9_single_line' 2023-09-26T12:30:56,578 adding 'skbio/io/format/tests/data/longreads_as_illumina.fastq' 2023-09-26T12:30:56,580 adding 'skbio/io/format/tests/data/longreads_as_sanger.fastq' 2023-09-26T12:30:56,582 adding 'skbio/io/format/tests/data/longreads_original_sanger.fastq' 2023-09-26T12:30:56,583 adding 'skbio/io/format/tests/data/misc_dna_as_illumina.fastq' 2023-09-26T12:30:56,585 adding 'skbio/io/format/tests/data/misc_dna_as_sanger.fastq' 2023-09-26T12:30:56,586 adding 'skbio/io/format/tests/data/misc_dna_original_sanger.fastq' 2023-09-26T12:30:56,587 adding 'skbio/io/format/tests/data/misc_rna_as_illumina.fastq' 2023-09-26T12:30:56,588 adding 'skbio/io/format/tests/data/misc_rna_as_sanger.fastq' 2023-09-26T12:30:56,589 adding 'skbio/io/format/tests/data/misc_rna_original_sanger.fastq' 2023-09-26T12:30:56,591 adding 'skbio/io/format/tests/data/ordination_L&L_CA_data_scores' 2023-09-26T12:30:56,592 adding 'skbio/io/format/tests/data/ordination_PCoA_sample_data_3_scores' 2023-09-26T12:30:56,594 adding 'skbio/io/format/tests/data/ordination_error1' 2023-09-26T12:30:56,595 adding 'skbio/io/format/tests/data/ordination_error10' 2023-09-26T12:30:56,596 adding 'skbio/io/format/tests/data/ordination_error11' 2023-09-26T12:30:56,598 adding 'skbio/io/format/tests/data/ordination_error12' 2023-09-26T12:30:56,599 adding 'skbio/io/format/tests/data/ordination_error13' 2023-09-26T12:30:56,600 adding 'skbio/io/format/tests/data/ordination_error14' 2023-09-26T12:30:56,602 adding 'skbio/io/format/tests/data/ordination_error15' 2023-09-26T12:30:56,603 adding 'skbio/io/format/tests/data/ordination_error16' 2023-09-26T12:30:56,604 adding 'skbio/io/format/tests/data/ordination_error17' 2023-09-26T12:30:56,606 adding 'skbio/io/format/tests/data/ordination_error18' 2023-09-26T12:30:56,607 adding 'skbio/io/format/tests/data/ordination_error19' 2023-09-26T12:30:56,608 adding 'skbio/io/format/tests/data/ordination_error2' 2023-09-26T12:30:56,609 adding 'skbio/io/format/tests/data/ordination_error20' 2023-09-26T12:30:56,610 adding 'skbio/io/format/tests/data/ordination_error21' 2023-09-26T12:30:56,611 adding 'skbio/io/format/tests/data/ordination_error22' 2023-09-26T12:30:56,612 adding 'skbio/io/format/tests/data/ordination_error23' 2023-09-26T12:30:56,613 adding 'skbio/io/format/tests/data/ordination_error24' 2023-09-26T12:30:56,614 adding 'skbio/io/format/tests/data/ordination_error3' 2023-09-26T12:30:56,616 adding 'skbio/io/format/tests/data/ordination_error4' 2023-09-26T12:30:56,617 adding 'skbio/io/format/tests/data/ordination_error5' 2023-09-26T12:30:56,618 adding 'skbio/io/format/tests/data/ordination_error6' 2023-09-26T12:30:56,620 adding 'skbio/io/format/tests/data/ordination_error7' 2023-09-26T12:30:56,621 adding 'skbio/io/format/tests/data/ordination_error8' 2023-09-26T12:30:56,622 adding 'skbio/io/format/tests/data/ordination_error9' 2023-09-26T12:30:56,623 adding 'skbio/io/format/tests/data/ordination_example2_scores' 2023-09-26T12:30:56,625 adding 'skbio/io/format/tests/data/ordination_example3_scores' 2023-09-26T12:30:56,626 adding 'skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site' 2023-09-26T12:30:56,627 adding 'skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site_constraints' 2023-09-26T12:30:56,629 adding 'skbio/io/format/tests/data/ordination_exp_Ordination_CCA_species' 2023-09-26T12:30:56,630 adding 'skbio/io/format/tests/data/ordination_exp_Ordination_PCoA_site' 2023-09-26T12:30:56,631 adding 'skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site' 2023-09-26T12:30:56,633 adding 'skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site_constraints' 2023-09-26T12:30:56,634 adding 'skbio/io/format/tests/data/ordination_exp_Ordination_RDA_species' 2023-09-26T12:30:56,635 adding 'skbio/io/format/tests/data/phylip_dna_3_seqs' 2023-09-26T12:30:56,636 adding 'skbio/io/format/tests/data/phylip_invalid_empty_line_after_header' 2023-09-26T12:30:56,637 adding 'skbio/io/format/tests/data/phylip_invalid_empty_line_before_header' 2023-09-26T12:30:56,638 adding 'skbio/io/format/tests/data/phylip_invalid_empty_line_between_seqs' 2023-09-26T12:30:56,639 adding 'skbio/io/format/tests/data/phylip_invalid_header_too_long' 2023-09-26T12:30:56,640 adding 'skbio/io/format/tests/data/phylip_invalid_header_too_short' 2023-09-26T12:30:56,641 adding 'skbio/io/format/tests/data/phylip_invalid_no_header' 2023-09-26T12:30:56,643 adding 'skbio/io/format/tests/data/phylip_invalid_seq_too_long' 2023-09-26T12:30:56,644 adding 'skbio/io/format/tests/data/phylip_invalid_seq_too_short' 2023-09-26T12:30:56,645 adding 'skbio/io/format/tests/data/phylip_invalid_too_few_seqs' 2023-09-26T12:30:56,646 adding 'skbio/io/format/tests/data/phylip_invalid_too_many_seqs' 2023-09-26T12:30:56,647 adding 'skbio/io/format/tests/data/phylip_invalid_zero_seq_len' 2023-09-26T12:30:56,648 adding 'skbio/io/format/tests/data/phylip_invalid_zero_seqs' 2023-09-26T12:30:56,649 adding 'skbio/io/format/tests/data/phylip_single_seq_long' 2023-09-26T12:30:56,650 adding 'skbio/io/format/tests/data/phylip_single_seq_short' 2023-09-26T12:30:56,651 adding 'skbio/io/format/tests/data/phylip_two_chunks' 2023-09-26T12:30:56,653 adding 'skbio/io/format/tests/data/phylip_variable_length_ids' 2023-09-26T12:30:56,654 adding 'skbio/io/format/tests/data/phylip_varied_whitespace_in_seqs' 2023-09-26T12:30:56,655 adding 'skbio/io/format/tests/data/phylip_whitespace_in_header_1' 2023-09-26T12:30:56,656 adding 'skbio/io/format/tests/data/phylip_whitespace_in_header_2' 2023-09-26T12:30:56,657 adding 'skbio/io/format/tests/data/phylip_whitespace_in_header_3' 2023-09-26T12:30:56,658 adding 'skbio/io/format/tests/data/qseq_invalid_filter' 2023-09-26T12:30:56,659 adding 'skbio/io/format/tests/data/qseq_invalid_lane' 2023-09-26T12:30:56,660 adding 'skbio/io/format/tests/data/qseq_invalid_read' 2023-09-26T12:30:56,661 adding 'skbio/io/format/tests/data/qseq_invalid_tile' 2023-09-26T12:30:56,662 adding 'skbio/io/format/tests/data/qseq_invalid_x' 2023-09-26T12:30:56,663 adding 'skbio/io/format/tests/data/qseq_invalid_y' 2023-09-26T12:30:56,664 adding 'skbio/io/format/tests/data/qseq_multi_seq_illumina1.3' 2023-09-26T12:30:56,665 adding 'skbio/io/format/tests/data/qseq_single_seq_sanger' 2023-09-26T12:30:56,666 adding 'skbio/io/format/tests/data/qual_2_seqs_defaults' 2023-09-26T12:30:56,667 adding 'skbio/io/format/tests/data/qual_3_seqs_defaults' 2023-09-26T12:30:56,669 adding 'skbio/io/format/tests/data/qual_3_seqs_defaults_desc_mismatch' 2023-09-26T12:30:56,672 adding 'skbio/io/format/tests/data/qual_3_seqs_defaults_extra' 2023-09-26T12:30:56,673 adding 'skbio/io/format/tests/data/qual_3_seqs_defaults_id_mismatch' 2023-09-26T12:30:56,674 adding 'skbio/io/format/tests/data/qual_3_seqs_defaults_length_mismatch' 2023-09-26T12:30:56,676 adding 'skbio/io/format/tests/data/qual_3_seqs_non_defaults' 2023-09-26T12:30:56,677 adding 'skbio/io/format/tests/data/qual_5_blanks_start_of_file' 2023-09-26T12:30:56,678 adding 'skbio/io/format/tests/data/qual_5_ws_lines_start_of_file' 2023-09-26T12:30:56,679 adding 'skbio/io/format/tests/data/qual_6_blanks_start_of_file' 2023-09-26T12:30:56,681 adding 'skbio/io/format/tests/data/qual_6_ws_lines_start_of_file' 2023-09-26T12:30:56,682 adding 'skbio/io/format/tests/data/qual_blank_lines_between_records' 2023-09-26T12:30:56,683 adding 'skbio/io/format/tests/data/qual_blanks_end_of_file' 2023-09-26T12:30:56,684 adding 'skbio/io/format/tests/data/qual_description_newline_replacement_empty_str' 2023-09-26T12:30:56,685 adding 'skbio/io/format/tests/data/qual_description_newline_replacement_multi_char' 2023-09-26T12:30:56,686 adding 'skbio/io/format/tests/data/qual_description_newline_replacement_none' 2023-09-26T12:30:56,688 adding 'skbio/io/format/tests/data/qual_id_whitespace_replacement_empty_str' 2023-09-26T12:30:56,689 adding 'skbio/io/format/tests/data/qual_id_whitespace_replacement_multi_char' 2023-09-26T12:30:56,690 adding 'skbio/io/format/tests/data/qual_id_whitespace_replacement_none' 2023-09-26T12:30:56,691 adding 'skbio/io/format/tests/data/qual_invalid_blank_line_after_header' 2023-09-26T12:30:56,692 adding 'skbio/io/format/tests/data/qual_invalid_blank_line_within_seq' 2023-09-26T12:30:56,693 adding 'skbio/io/format/tests/data/qual_invalid_blank_sequence' 2023-09-26T12:30:56,694 adding 'skbio/io/format/tests/data/qual_invalid_legacy_format' 2023-09-26T12:30:56,695 adding 'skbio/io/format/tests/data/qual_invalid_missing_header' 2023-09-26T12:30:56,697 adding 'skbio/io/format/tests/data/qual_invalid_missing_qual_scores_first' 2023-09-26T12:30:56,698 adding 'skbio/io/format/tests/data/qual_invalid_missing_qual_scores_last' 2023-09-26T12:30:56,699 adding 'skbio/io/format/tests/data/qual_invalid_missing_qual_scores_middle' 2023-09-26T12:30:56,700 adding 'skbio/io/format/tests/data/qual_invalid_qual_scores_float' 2023-09-26T12:30:56,701 adding 'skbio/io/format/tests/data/qual_invalid_qual_scores_negative' 2023-09-26T12:30:56,702 adding 'skbio/io/format/tests/data/qual_invalid_qual_scores_over_255' 2023-09-26T12:30:56,703 adding 'skbio/io/format/tests/data/qual_invalid_qual_scores_string' 2023-09-26T12:30:56,705 adding 'skbio/io/format/tests/data/qual_invalid_whitespace_line_in_seq' 2023-09-26T12:30:56,706 adding 'skbio/io/format/tests/data/qual_invalid_whitespace_only_sequence' 2023-09-26T12:30:56,707 adding 'skbio/io/format/tests/data/qual_invalid_ws_line_after_header' 2023-09-26T12:30:56,708 adding 'skbio/io/format/tests/data/qual_max_width_1' 2023-09-26T12:30:56,709 adding 'skbio/io/format/tests/data/qual_max_width_5' 2023-09-26T12:30:56,710 adding 'skbio/io/format/tests/data/qual_multi_seq' 2023-09-26T12:30:56,711 adding 'skbio/io/format/tests/data/qual_multi_seq_roundtrip' 2023-09-26T12:30:56,713 adding 'skbio/io/format/tests/data/qual_prot_seqs_odd_labels' 2023-09-26T12:30:56,714 adding 'skbio/io/format/tests/data/qual_single_bio_seq_non_defaults' 2023-09-26T12:30:56,715 adding 'skbio/io/format/tests/data/qual_single_dna_seq_non_defaults' 2023-09-26T12:30:56,716 adding 'skbio/io/format/tests/data/qual_single_nuc_seq_non_defaults' 2023-09-26T12:30:56,717 adding 'skbio/io/format/tests/data/qual_single_prot_seq_non_defaults' 2023-09-26T12:30:56,718 adding 'skbio/io/format/tests/data/qual_single_rna_seq_non_defaults' 2023-09-26T12:30:56,719 adding 'skbio/io/format/tests/data/qual_single_seq' 2023-09-26T12:30:56,720 adding 'skbio/io/format/tests/data/qual_tabular_msa_different_type' 2023-09-26T12:30:56,721 adding 'skbio/io/format/tests/data/qual_ws_lines_between_records' 2023-09-26T12:30:56,722 adding 'skbio/io/format/tests/data/qual_ws_lines_end_of_file' 2023-09-26T12:30:56,723 adding 'skbio/io/format/tests/data/sanger_full_range_as_illumina.fastq' 2023-09-26T12:30:56,725 adding 'skbio/io/format/tests/data/sanger_full_range_as_sanger.fastq' 2023-09-26T12:30:56,726 adding 'skbio/io/format/tests/data/sanger_full_range_original_sanger.fastq' 2023-09-26T12:30:56,727 adding 'skbio/io/format/tests/data/solexa_full_range_original_solexa.fastq' 2023-09-26T12:30:56,728 adding 'skbio/io/format/tests/data/stockholm_all_data_types' 2023-09-26T12:30:56,729 adding 'skbio/io/format/tests/data/stockholm_blank_lines' 2023-09-26T12:30:56,730 adding 'skbio/io/format/tests/data/stockholm_data_only' 2023-09-26T12:30:56,731 adding 'skbio/io/format/tests/data/stockholm_different_padding' 2023-09-26T12:30:56,732 adding 'skbio/io/format/tests/data/stockholm_differing_gc_data_length' 2023-09-26T12:30:56,734 adding 'skbio/io/format/tests/data/stockholm_differing_gr_data_length' 2023-09-26T12:30:56,735 adding 'skbio/io/format/tests/data/stockholm_differing_seq_lengths' 2023-09-26T12:30:56,736 adding 'skbio/io/format/tests/data/stockholm_duplicate_gc' 2023-09-26T12:30:56,737 adding 'skbio/io/format/tests/data/stockholm_duplicate_gr' 2023-09-26T12:30:56,738 adding 'skbio/io/format/tests/data/stockholm_duplicate_sequence_names' 2023-09-26T12:30:56,739 adding 'skbio/io/format/tests/data/stockholm_duplicate_tree_ids' 2023-09-26T12:30:56,740 adding 'skbio/io/format/tests/data/stockholm_extensive' 2023-09-26T12:30:56,742 adding 'skbio/io/format/tests/data/stockholm_extensive_mixed' 2023-09-26T12:30:56,743 adding 'skbio/io/format/tests/data/stockholm_invalid_data_type' 2023-09-26T12:30:56,745 adding 'skbio/io/format/tests/data/stockholm_invalid_nonexistent_gr' 2023-09-26T12:30:56,746 adding 'skbio/io/format/tests/data/stockholm_invalid_nonexistent_gs' 2023-09-26T12:30:56,747 adding 'skbio/io/format/tests/data/stockholm_malformed_data_line' 2023-09-26T12:30:56,748 adding 'skbio/io/format/tests/data/stockholm_malformed_gc_line' 2023-09-26T12:30:56,749 adding 'skbio/io/format/tests/data/stockholm_malformed_gf_line' 2023-09-26T12:30:56,750 adding 'skbio/io/format/tests/data/stockholm_malformed_gr_line' 2023-09-26T12:30:56,752 adding 'skbio/io/format/tests/data/stockholm_malformed_gs_line' 2023-09-26T12:30:56,753 adding 'skbio/io/format/tests/data/stockholm_metadata_only' 2023-09-26T12:30:56,754 adding 'skbio/io/format/tests/data/stockholm_minimal' 2023-09-26T12:30:56,755 adding 'skbio/io/format/tests/data/stockholm_missing_footer' 2023-09-26T12:30:56,757 adding 'skbio/io/format/tests/data/stockholm_missing_header' 2023-09-26T12:30:56,758 adding 'skbio/io/format/tests/data/stockholm_missing_reference_items' 2023-09-26T12:30:56,759 adding 'skbio/io/format/tests/data/stockholm_missing_rn_tag' 2023-09-26T12:30:56,761 adding 'skbio/io/format/tests/data/stockholm_multi_line_tree_no_id' 2023-09-26T12:30:56,762 adding 'skbio/io/format/tests/data/stockholm_multi_line_tree_with_id' 2023-09-26T12:30:56,763 adding 'skbio/io/format/tests/data/stockholm_multiple_msa' 2023-09-26T12:30:56,764 adding 'skbio/io/format/tests/data/stockholm_multiple_multi_line_trees' 2023-09-26T12:30:56,765 adding 'skbio/io/format/tests/data/stockholm_multiple_references' 2023-09-26T12:30:56,766 adding 'skbio/io/format/tests/data/stockholm_multiple_trees' 2023-09-26T12:30:56,768 adding 'skbio/io/format/tests/data/stockholm_no_data' 2023-09-26T12:30:56,769 adding 'skbio/io/format/tests/data/stockholm_nonstring_labels' 2023-09-26T12:30:56,770 adding 'skbio/io/format/tests/data/stockholm_rna' 2023-09-26T12:30:56,771 adding 'skbio/io/format/tests/data/stockholm_runon_gf_no_whitespace' 2023-09-26T12:30:56,773 adding 'skbio/io/format/tests/data/stockholm_runon_gf_with_whitespace' 2023-09-26T12:30:56,774 adding 'skbio/io/format/tests/data/stockholm_runon_gs_no_whitespace' 2023-09-26T12:30:56,775 adding 'skbio/io/format/tests/data/stockholm_runon_gs_with_whitespace' 2023-09-26T12:30:56,776 adding 'skbio/io/format/tests/data/stockholm_runon_references' 2023-09-26T12:30:56,778 adding 'skbio/io/format/tests/data/stockholm_runon_references_mixed' 2023-09-26T12:30:56,779 adding 'skbio/io/format/tests/data/stockholm_single_reference' 2023-09-26T12:30:56,780 adding 'skbio/io/format/tests/data/stockholm_single_tree_with_id' 2023-09-26T12:30:56,781 adding 'skbio/io/format/tests/data/stockholm_single_tree_without_id' 2023-09-26T12:30:56,782 adding 'skbio/io/format/tests/data/stockholm_two_of_each_metadata' 2023-09-26T12:30:56,783 adding 'skbio/io/format/tests/data/stockholm_whitespace_only_lines' 2023-09-26T12:30:56,785 adding 'skbio/io/format/tests/data/taxdump_names.dmp' 2023-09-26T12:30:56,786 adding 'skbio/io/format/tests/data/taxdump_nodes.dmp' 2023-09-26T12:30:56,787 adding 'skbio/io/format/tests/data/tsv_10_fields' 2023-09-26T12:30:56,788 adding 'skbio/io/format/tests/data/tsv_8_fields' 2023-09-26T12:30:56,789 adding 'skbio/io/format/tests/data/whitespace_only' 2023-09-26T12:30:56,790 adding 'skbio/io/format/tests/data/wrapping_as_illumina.fastq' 2023-09-26T12:30:56,792 adding 'skbio/io/format/tests/data/wrapping_as_sanger.fastq' 2023-09-26T12:30:56,793 adding 'skbio/io/format/tests/data/wrapping_original_sanger.fastq' 2023-09-26T12:30:56,795 adding 'skbio/io/tests/__init__.py' 2023-09-26T12:30:56,796 adding 'skbio/io/tests/test_iosources.py' 2023-09-26T12:30:56,801 adding 'skbio/io/tests/test_registry.py' 2023-09-26T12:30:56,804 adding 'skbio/io/tests/test_util.py' 2023-09-26T12:30:56,805 adding 'skbio/io/tests/data/big5_file' 2023-09-26T12:30:56,807 adding 'skbio/io/tests/data/big5_file.bz2' 2023-09-26T12:30:56,808 adding 'skbio/io/tests/data/big5_file.gz' 2023-09-26T12:30:56,809 adding 'skbio/io/tests/data/example_file' 2023-09-26T12:30:56,810 adding 'skbio/io/tests/data/example_file.bz2' 2023-09-26T12:30:56,812 adding 'skbio/io/tests/data/example_file.gz' 2023-09-26T12:30:56,813 adding 'skbio/io/tests/data/real_file' 2023-09-26T12:30:56,814 adding 'skbio/io/tests/data/real_file_2' 2023-09-26T12:30:56,816 adding 'skbio/metadata/__init__.py' 2023-09-26T12:30:56,945 adding 'skbio/metadata/_intersection.cpython-311-arm-linux-gnueabihf.so' 2023-09-26T12:30:56,954 adding 'skbio/metadata/_interval.py' 2023-09-26T12:30:56,957 adding 'skbio/metadata/_mixin.py' 2023-09-26T12:30:56,958 adding 'skbio/metadata/_repr.py' 2023-09-26T12:30:56,962 adding 'skbio/metadata/_testing.py' 2023-09-26T12:30:56,964 adding 'skbio/metadata/tests/__init__.py' 2023-09-26T12:30:56,966 adding 'skbio/metadata/tests/test_intersection.py' 2023-09-26T12:30:56,969 adding 'skbio/metadata/tests/test_interval.py' 2023-09-26T12:30:56,970 adding 'skbio/metadata/tests/test_mixin.py' 2023-09-26T12:30:56,972 adding 'skbio/sequence/__init__.py' 2023-09-26T12:30:56,974 adding 'skbio/sequence/_dna.py' 2023-09-26T12:30:56,978 adding 'skbio/sequence/_genetic_code.py' 2023-09-26T12:30:56,981 adding 'skbio/sequence/_grammared_sequence.py' 2023-09-26T12:30:56,983 adding 'skbio/sequence/_nucleotide_mixin.py' 2023-09-26T12:30:56,984 adding 'skbio/sequence/_protein.py' 2023-09-26T12:30:56,985 adding 'skbio/sequence/_repr.py' 2023-09-26T12:30:56,987 adding 'skbio/sequence/_rna.py' 2023-09-26T12:30:56,995 adding 'skbio/sequence/_sequence.py' 2023-09-26T12:30:56,997 adding 'skbio/sequence/distance.py' 2023-09-26T12:30:56,999 adding 'skbio/sequence/tests/__init__.py' 2023-09-26T12:30:57,000 adding 'skbio/sequence/tests/test_distance.py' 2023-09-26T12:30:57,001 adding 'skbio/sequence/tests/test_dna.py' 2023-09-26T12:30:57,003 adding 'skbio/sequence/tests/test_genetic_code.py' 2023-09-26T12:30:57,006 adding 'skbio/sequence/tests/test_grammared_sequence.py' 2023-09-26T12:30:57,008 adding 'skbio/sequence/tests/test_nucleotide_sequences.py' 2023-09-26T12:30:57,010 adding 'skbio/sequence/tests/test_protein.py' 2023-09-26T12:30:57,011 adding 'skbio/sequence/tests/test_rna.py' 2023-09-26T12:30:57,019 adding 'skbio/sequence/tests/test_sequence.py' 2023-09-26T12:30:57,022 adding 'skbio/stats/__init__.py' 2023-09-26T12:30:57,052 adding 'skbio/stats/__subsample.cpython-311-arm-linux-gnueabihf.so' 2023-09-26T12:30:57,054 adding 'skbio/stats/_misc.py' 2023-09-26T12:30:57,056 adding 'skbio/stats/_subsample.py' 2023-09-26T12:30:57,062 adding 'skbio/stats/composition.py' 2023-09-26T12:30:57,066 adding 'skbio/stats/gradient.py' 2023-09-26T12:30:57,071 adding 'skbio/stats/power.py' 2023-09-26T12:30:57,074 adding 'skbio/stats/distance/__init__.py' 2023-09-26T12:30:57,075 adding 'skbio/stats/distance/_anosim.py' 2023-09-26T12:30:57,081 adding 'skbio/stats/distance/_base.py' 2023-09-26T12:30:57,083 adding 'skbio/stats/distance/_bioenv.py' 2023-09-26T12:30:57,316 adding 'skbio/stats/distance/_cutils.cpython-311-arm-linux-gnueabihf.so' 2023-09-26T12:30:57,328 adding 'skbio/stats/distance/_mantel.py' 2023-09-26T12:30:57,330 adding 'skbio/stats/distance/_permanova.py' 2023-09-26T12:30:57,332 adding 'skbio/stats/distance/_permdisp.py' 2023-09-26T12:30:57,333 adding 'skbio/stats/distance/_utils.py' 2023-09-26T12:30:57,335 adding 'skbio/stats/distance/tests/__init__.py' 2023-09-26T12:30:57,336 adding 'skbio/stats/distance/tests/test_anosim.py' 2023-09-26T12:30:57,340 adding 'skbio/stats/distance/tests/test_base.py' 2023-09-26T12:30:57,342 adding 'skbio/stats/distance/tests/test_bioenv.py' 2023-09-26T12:30:57,345 adding 'skbio/stats/distance/tests/test_mantel.py' 2023-09-26T12:30:57,347 adding 'skbio/stats/distance/tests/test_permanova.py' 2023-09-26T12:30:57,349 adding 'skbio/stats/distance/tests/test_permdisp.py' 2023-09-26T12:30:57,351 adding 'skbio/stats/distance/tests/data/bioenv_df_vegan.txt' 2023-09-26T12:30:57,353 adding 'skbio/stats/distance/tests/data/bioenv_dm_vegan.txt' 2023-09-26T12:30:57,354 adding 'skbio/stats/distance/tests/data/bioenv_exp_results_vegan.txt' 2023-09-26T12:30:57,355 adding 'skbio/stats/distance/tests/data/df.txt' 2023-09-26T12:30:57,356 adding 'skbio/stats/distance/tests/data/df_extra_column.txt' 2023-09-26T12:30:57,358 adding 'skbio/stats/distance/tests/data/dm.txt' 2023-09-26T12:30:57,359 adding 'skbio/stats/distance/tests/data/dm2.txt' 2023-09-26T12:30:57,360 adding 'skbio/stats/distance/tests/data/dm3.txt' 2023-09-26T12:30:57,361 adding 'skbio/stats/distance/tests/data/dm4.txt' 2023-09-26T12:30:57,362 adding 'skbio/stats/distance/tests/data/dm_reordered.txt' 2023-09-26T12:30:57,364 adding 'skbio/stats/distance/tests/data/exp_results.txt' 2023-09-26T12:30:57,365 adding 'skbio/stats/distance/tests/data/exp_results_different_column_order.txt' 2023-09-26T12:30:57,366 adding 'skbio/stats/distance/tests/data/exp_results_single_column.txt' 2023-09-26T12:30:57,368 adding 'skbio/stats/distance/tests/data/mantel_env_dm_vegan.txt' 2023-09-26T12:30:57,370 adding 'skbio/stats/distance/tests/data/mantel_veg_dm_vegan.txt' 2023-09-26T12:30:57,372 adding 'skbio/stats/distance/tests/data/moving_pictures_dm.tsv' 2023-09-26T12:30:57,374 adding 'skbio/stats/distance/tests/data/moving_pictures_mf.tsv' 2023-09-26T12:30:57,375 adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_all_dms.txt' 2023-09-26T12:30:57,376 adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_dm_dm2.txt' 2023-09-26T12:30:57,377 adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_duplicate_dms.txt' 2023-09-26T12:30:57,378 adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_minimal.txt' 2023-09-26T12:30:57,379 adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_minimal_with_labels.txt' 2023-09-26T12:30:57,381 adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_na_p_value.txt' 2023-09-26T12:30:57,382 adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_reordered_distance_matrices.txt' 2023-09-26T12:30:57,384 adding 'skbio/stats/evolve/__init__.py' 2023-09-26T12:30:57,386 adding 'skbio/stats/evolve/_hommola.py' 2023-09-26T12:30:57,387 adding 'skbio/stats/evolve/tests/__init__.py' 2023-09-26T12:30:57,389 adding 'skbio/stats/evolve/tests/test_hommola.py' 2023-09-26T12:30:57,391 adding 'skbio/stats/ordination/__init__.py' 2023-09-26T12:30:57,393 adding 'skbio/stats/ordination/_canonical_correspondence_analysis.py' 2023-09-26T12:30:57,395 adding 'skbio/stats/ordination/_correspondence_analysis.py' 2023-09-26T12:30:57,610 adding 'skbio/stats/ordination/_cutils.cpython-311-arm-linux-gnueabihf.so' 2023-09-26T12:30:57,621 adding 'skbio/stats/ordination/_ordination_results.py' 2023-09-26T12:30:57,623 adding 'skbio/stats/ordination/_principal_coordinate_analysis.py' 2023-09-26T12:30:57,625 adding 'skbio/stats/ordination/_redundancy_analysis.py' 2023-09-26T12:30:57,627 adding 'skbio/stats/ordination/_utils.py' 2023-09-26T12:30:57,629 adding 'skbio/stats/ordination/tests/__init__.py' 2023-09-26T12:30:57,630 adding 'skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py' 2023-09-26T12:30:57,632 adding 'skbio/stats/ordination/tests/test_correspondence_analysis.py' 2023-09-26T12:30:57,634 adding 'skbio/stats/ordination/tests/test_ordination_results.py' 2023-09-26T12:30:57,636 adding 'skbio/stats/ordination/tests/test_principal_coordinate_analysis.py' 2023-09-26T12:30:57,638 adding 'skbio/stats/ordination/tests/test_redundancy_analysis.py' 2023-09-26T12:30:57,639 adding 'skbio/stats/ordination/tests/test_util.py' 2023-09-26T12:30:57,641 adding 'skbio/stats/ordination/tests/data/L&L_CA_data' 2023-09-26T12:30:57,645 adding 'skbio/stats/ordination/tests/data/PCoA_biplot_descriptors' 2023-09-26T12:30:57,646 adding 'skbio/stats/ordination/tests/data/PCoA_biplot_projected_descriptors' 2023-09-26T12:30:57,647 adding 'skbio/stats/ordination/tests/data/PCoA_sample_data' 2023-09-26T12:30:57,649 adding 'skbio/stats/ordination/tests/data/PCoA_sample_data_12dim' 2023-09-26T12:30:57,650 adding 'skbio/stats/ordination/tests/data/PCoA_sample_data_2' 2023-09-26T12:30:57,651 adding 'skbio/stats/ordination/tests/data/PCoA_sample_data_3' 2023-09-26T12:30:57,652 adding 'skbio/stats/ordination/tests/data/PCoA_sample_data_3_eigh_ref_3dim' 2023-09-26T12:30:57,653 adding 'skbio/stats/ordination/tests/data/PCoA_sample_data_3_fsvd_ref_3dim' 2023-09-26T12:30:57,655 adding 'skbio/stats/ordination/tests/data/PCoA_skbio' 2023-09-26T12:30:57,656 adding 'skbio/stats/ordination/tests/data/example2_X' 2023-09-26T12:30:57,657 adding 'skbio/stats/ordination/tests/data/example2_Y' 2023-09-26T12:30:57,658 adding 'skbio/stats/ordination/tests/data/example2_biplot_scaling1' 2023-09-26T12:30:57,659 adding 'skbio/stats/ordination/tests/data/example2_biplot_scaling2' 2023-09-26T12:30:57,661 adding 'skbio/stats/ordination/tests/data/example2_sample_constraints_scaling1' 2023-09-26T12:30:57,662 adding 'skbio/stats/ordination/tests/data/example2_sample_constraints_scaling2' 2023-09-26T12:30:57,663 adding 'skbio/stats/ordination/tests/data/example2_site_scaling1_from_vegan' 2023-09-26T12:30:57,664 adding 'skbio/stats/ordination/tests/data/example2_site_scaling2_from_vegan' 2023-09-26T12:30:57,665 adding 'skbio/stats/ordination/tests/data/example2_species_scaling1_from_vegan' 2023-09-26T12:30:57,667 adding 'skbio/stats/ordination/tests/data/example2_species_scaling2_from_vegan' 2023-09-26T12:30:57,667 adding 'skbio/stats/ordination/tests/data/example3_X' 2023-09-26T12:30:57,669 adding 'skbio/stats/ordination/tests/data/example3_Y' 2023-09-26T12:30:57,669 adding 'skbio/stats/ordination/tests/data/example3_biplot_scaling1' 2023-09-26T12:30:57,670 adding 'skbio/stats/ordination/tests/data/example3_biplot_scaling2' 2023-09-26T12:30:57,671 adding 'skbio/stats/ordination/tests/data/example3_sample_constraints_scaling1' 2023-09-26T12:30:57,673 adding 'skbio/stats/ordination/tests/data/example3_sample_constraints_scaling2' 2023-09-26T12:30:57,674 adding 'skbio/stats/ordination/tests/data/example3_site_scaling1_from_vegan' 2023-09-26T12:30:57,675 adding 'skbio/stats/ordination/tests/data/example3_site_scaling2_from_vegan' 2023-09-26T12:30:57,676 adding 'skbio/stats/ordination/tests/data/example3_species_scaling1_from_vegan' 2023-09-26T12:30:57,677 adding 'skbio/stats/ordination/tests/data/example3_species_scaling2_from_vegan' 2023-09-26T12:30:57,678 adding 'skbio/stats/ordination/tests/data/exp_PCoAEigenResults_site' 2023-09-26T12:30:57,680 adding 'skbio/stats/ordination/tests/data/exp_PCoAzeros_site' 2023-09-26T12:30:57,681 adding 'skbio/stats/ordination/tests/data/vare_rda_biplot_from_vegan.csv' 2023-09-26T12:30:57,682 adding 'skbio/stats/ordination/tests/data/vare_rda_constraints_from_vegan.csv' 2023-09-26T12:30:57,683 adding 'skbio/stats/ordination/tests/data/vare_rda_eigvals_from_vegan.csv' 2023-09-26T12:30:57,685 adding 'skbio/stats/ordination/tests/data/vare_rda_propexpl_from_vegan.csv' 2023-09-26T12:30:57,686 adding 'skbio/stats/ordination/tests/data/vare_rda_sites_from_vegan.csv' 2023-09-26T12:30:57,687 adding 'skbio/stats/ordination/tests/data/vare_rda_species_from_vegan.csv' 2023-09-26T12:30:57,689 adding 'skbio/stats/ordination/tests/data/varechem.csv' 2023-09-26T12:30:57,690 adding 'skbio/stats/ordination/tests/data/varespec.csv' 2023-09-26T12:30:57,692 adding 'skbio/stats/tests/__init__.py' 2023-09-26T12:30:57,696 adding 'skbio/stats/tests/test_composition.py' 2023-09-26T12:30:57,700 adding 'skbio/stats/tests/test_gradient.py' 2023-09-26T12:30:57,702 adding 'skbio/stats/tests/test_misc.py' 2023-09-26T12:30:57,705 adding 'skbio/stats/tests/test_power.py' 2023-09-26T12:30:57,707 adding 'skbio/stats/tests/test_subsample.py' 2023-09-26T12:30:57,709 adding 'skbio/stats/tests/data/cr_data_out' 2023-09-26T12:30:57,710 adding 'skbio/stats/tests/data/cr_data_raw' 2023-09-26T12:30:57,711 adding 'skbio/stats/tests/data/cr_no_data_out' 2023-09-26T12:30:57,712 adding 'skbio/stats/tests/data/cr_no_data_raw' 2023-09-26T12:30:57,713 adding 'skbio/stats/tests/data/gr_w_msg_out' 2023-09-26T12:30:57,714 adding 'skbio/stats/tests/data/gr_w_msg_raw' 2023-09-26T12:30:57,715 adding 'skbio/stats/tests/data/gr_wo_msg_out' 2023-09-26T12:30:57,717 adding 'skbio/stats/tests/data/gr_wo_msg_raw' 2023-09-26T12:30:57,718 adding 'skbio/stats/tests/data/vr_out' 2023-09-26T12:30:57,719 adding 'skbio/stats/tests/data/vr_raw' 2023-09-26T12:30:57,720 adding 'skbio/stats/tests/data/vr_real_out' 2023-09-26T12:30:57,721 adding 'skbio/stats/tests/data/vr_real_raw' 2023-09-26T12:30:57,723 adding 'skbio/tests/__init__.py' 2023-09-26T12:30:57,724 adding 'skbio/tests/test_base.py' 2023-09-26T12:30:57,726 adding 'skbio/tests/test_workflow.py' 2023-09-26T12:30:57,728 adding 'skbio/tree/__init__.py' 2023-09-26T12:30:57,729 adding 'skbio/tree/_exception.py' 2023-09-26T12:30:57,731 adding 'skbio/tree/_majority_rule.py' 2023-09-26T12:30:57,733 adding 'skbio/tree/_nj.py' 2023-09-26T12:30:57,745 adding 'skbio/tree/_tree.py' 2023-09-26T12:30:57,748 adding 'skbio/tree/tests/__init__.py' 2023-09-26T12:30:57,749 adding 'skbio/tree/tests/test_majority_rule.py' 2023-09-26T12:30:57,751 adding 'skbio/tree/tests/test_nj.py' 2023-09-26T12:30:57,757 adding 'skbio/tree/tests/test_tree.py' 2023-09-26T12:30:57,759 adding 'skbio/util/__init__.py' 2023-09-26T12:30:57,761 adding 'skbio/util/_decorator.py' 2023-09-26T12:30:57,762 adding 'skbio/util/_exception.py' 2023-09-26T12:30:57,763 adding 'skbio/util/_misc.py' 2023-09-26T12:30:57,766 adding 'skbio/util/_testing.py' 2023-09-26T12:30:57,767 adding 'skbio/util/_warning.py' 2023-09-26T12:30:57,769 adding 'skbio/util/tests/__init__.py' 2023-09-26T12:30:57,770 adding 'skbio/util/tests/test_decorator.py' 2023-09-26T12:30:57,772 adding 'skbio/util/tests/test_misc.py' 2023-09-26T12:30:57,773 adding 'skbio/util/tests/test_testing.py' 2023-09-26T12:30:57,774 adding 'scikit_bio-0.5.9.dist-info/LICENSE.txt' 2023-09-26T12:30:57,776 adding 'scikit_bio-0.5.9.dist-info/METADATA' 2023-09-26T12:30:57,777 adding 'scikit_bio-0.5.9.dist-info/WHEEL' 2023-09-26T12:30:57,778 adding 'scikit_bio-0.5.9.dist-info/top_level.txt' 2023-09-26T12:30:57,788 adding 'scikit_bio-0.5.9.dist-info/RECORD' 2023-09-26T12:30:57,824 removing build/bdist.linux-armv7l/wheel 2023-09-26T12:30:58,143 Building wheel for scikit-bio (pyproject.toml): finished with status 'done' 2023-09-26T12:30:58,207 Created wheel for scikit-bio: filename=scikit_bio-0.5.9-cp311-cp311-linux_armv7l.whl size=2527800 sha256=0d10c6c7922db15dcc5640bac5f192fdd8606fa47facd0f34eb648f9c3e049b2 2023-09-26T12:30:58,209 Stored in directory: /tmp/pip-ephem-wheel-cache-9_w2vz_s/wheels/36/cc/89/e5ad9cf555571aa168617d16ff43331cfef9cce2ff949a8862 2023-09-26T12:30:58,250 Successfully built scikit-bio 2023-09-26T12:30:58,329 Removed build tracker: '/tmp/pip-build-tracker-wqe732i0'