2023-09-26T17:52:12,465 Created temporary directory: /tmp/pip-build-tracker-2cah7fdt 2023-09-26T17:52:12,466 Initialized build tracking at /tmp/pip-build-tracker-2cah7fdt 2023-09-26T17:52:12,467 Created build tracker: /tmp/pip-build-tracker-2cah7fdt 2023-09-26T17:52:12,467 Entered build tracker: /tmp/pip-build-tracker-2cah7fdt 2023-09-26T17:52:12,468 Created temporary directory: /tmp/pip-wheel-stkn94rb 2023-09-26T17:52:12,471 Created temporary directory: /tmp/pip-ephem-wheel-cache-dzdoltk5 2023-09-26T17:52:12,492 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-26T17:52:12,496 2 location(s) to search for versions of ohdsi-feature-extraction: 2023-09-26T17:52:12,496 * https://pypi.org/simple/ohdsi-feature-extraction/ 2023-09-26T17:52:12,496 * https://www.piwheels.org/simple/ohdsi-feature-extraction/ 2023-09-26T17:52:12,497 Fetching project page and analyzing links: https://pypi.org/simple/ohdsi-feature-extraction/ 2023-09-26T17:52:12,498 Getting page https://pypi.org/simple/ohdsi-feature-extraction/ 2023-09-26T17:52:12,499 Found index url https://pypi.org/simple/ 2023-09-26T17:52:12,644 Fetched page https://pypi.org/simple/ohdsi-feature-extraction/ as application/vnd.pypi.simple.v1+json 2023-09-26T17:52:12,647 Found link https://files.pythonhosted.org/packages/a2/5d/884a5d674e6fb6b26176e99b45ec3f61746e3e6cfbc4fe83ca900b46cf7c/ohdsi-feature-extraction-0.2.2.tar.gz (from https://pypi.org/simple/ohdsi-feature-extraction/) (requires-python:>=3.10), version: 0.2.2 2023-09-26T17:52:12,648 Skipping link: No binaries permitted for ohdsi-feature-extraction: https://files.pythonhosted.org/packages/dd/0d/91cc50dde0a787d844f61d60a85bd966e0d8b956e392d9af300b575eb03c/ohdsi_feature_extraction-0.2.2-py3-none-any.whl (from https://pypi.org/simple/ohdsi-feature-extraction/) (requires-python:>=3.10) 2023-09-26T17:52:12,649 Found link https://files.pythonhosted.org/packages/1f/d5/8172b3a2f783ea08ef4383bbbb407a252776712f31019a17c3a893adadb6/ohdsi-feature-extraction-0.2.3.tar.gz (from https://pypi.org/simple/ohdsi-feature-extraction/) (requires-python:>=3.10), version: 0.2.3 2023-09-26T17:52:12,649 Skipping link: No binaries permitted for ohdsi-feature-extraction: https://files.pythonhosted.org/packages/85/ee/2c49428aa66c807d6c79820d6cef4fd105d88f82a5164e8df20fe7764d23/ohdsi_feature_extraction-0.2.3-py3-none-any.whl (from https://pypi.org/simple/ohdsi-feature-extraction/) (requires-python:>=3.10) 2023-09-26T17:52:12,651 Found link https://files.pythonhosted.org/packages/79/c1/ea9fdbcb75bdffb1eb9bc4dd935325e4883362ee122fa2b20d913363a9aa/ohdsi-feature-extraction-0.2.4.tar.gz (from https://pypi.org/simple/ohdsi-feature-extraction/) (requires-python:>=3.10), version: 0.2.4 2023-09-26T17:52:12,651 Skipping link: No binaries permitted for ohdsi-feature-extraction: https://files.pythonhosted.org/packages/8c/39/94a6810da3bb4b865dc28addf54b9ac7f0c5a12746135bffa19f9d4acfaa/ohdsi_feature_extraction-0.2.4-py3-none-any.whl (from https://pypi.org/simple/ohdsi-feature-extraction/) (requires-python:>=3.10) 2023-09-26T17:52:12,652 Found link https://files.pythonhosted.org/packages/dc/87/948bc92ab03bf0b6b2af730fcb8cdfd4c854a1b4136720bc68b01b18f98c/ohdsi-feature-extraction-0.3.0.tar.gz (from https://pypi.org/simple/ohdsi-feature-extraction/) (requires-python:>=3.10), version: 0.3.0 2023-09-26T17:52:12,653 Skipping link: No binaries permitted for ohdsi-feature-extraction: https://files.pythonhosted.org/packages/e7/cd/6fcf7864155e452c47a953ea21a79b64b5dc86c1296d290f98322b5ef461/ohdsi_feature_extraction-0.3.0-py3-none-any.whl (from https://pypi.org/simple/ohdsi-feature-extraction/) (requires-python:>=3.10) 2023-09-26T17:52:12,654 Fetching project page and analyzing links: https://www.piwheels.org/simple/ohdsi-feature-extraction/ 2023-09-26T17:52:12,655 Getting page https://www.piwheels.org/simple/ohdsi-feature-extraction/ 2023-09-26T17:52:12,656 Found index url https://www.piwheels.org/simple/ 2023-09-26T17:52:12,826 Fetched page https://www.piwheels.org/simple/ohdsi-feature-extraction/ as text/html 2023-09-26T17:52:12,827 Skipping link: not a file: https://www.piwheels.org/simple/ohdsi-feature-extraction/ 2023-09-26T17:52:12,828 Skipping link: not a file: https://pypi.org/simple/ohdsi-feature-extraction/ 2023-09-26T17:52:12,847 Given no hashes to check 1 links for project 'ohdsi-feature-extraction': discarding no candidates 2023-09-26T17:52:12,865 Collecting ohdsi-feature-extraction==0.2.4 2023-09-26T17:52:12,867 Created temporary directory: /tmp/pip-unpack-r46v1wsp 2023-09-26T17:52:13,607 Downloading ohdsi-feature-extraction-0.2.4.tar.gz (14 kB) 2023-09-26T17:52:13,635 Added ohdsi-feature-extraction==0.2.4 from https://files.pythonhosted.org/packages/79/c1/ea9fdbcb75bdffb1eb9bc4dd935325e4883362ee122fa2b20d913363a9aa/ohdsi-feature-extraction-0.2.4.tar.gz to build tracker '/tmp/pip-build-tracker-2cah7fdt' 2023-09-26T17:52:13,637 Running setup.py (path:/tmp/pip-wheel-stkn94rb/ohdsi-feature-extraction_462110e224b34ea3a0f1a751e260e4dd/setup.py) egg_info for package ohdsi-feature-extraction 2023-09-26T17:52:13,637 Created temporary directory: /tmp/pip-pip-egg-info-hrd0ty12 2023-09-26T17:52:13,638 Preparing metadata (setup.py): started 2023-09-26T17:52:13,639 Running command python setup.py egg_info 2023-09-26T17:52:14,078 Traceback (most recent call last): 2023-09-26T17:52:14,079 File "", line 2, in 2023-09-26T17:52:14,079 File "", line 34, in 2023-09-26T17:52:14,080 File "/tmp/pip-wheel-stkn94rb/ohdsi-feature-extraction_462110e224b34ea3a0f1a751e260e4dd/setup.py", line 11, in 2023-09-26T17:52:14,081 with codecs.open(parent_dir / 'README.md', encoding='utf-8') as f: 2023-09-26T17:52:14,082 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-26T17:52:14,082 File "", line 906, in open 2023-09-26T17:52:14,083 FileNotFoundError: [Errno 2] No such file or directory: '/tmp/pip-wheel-stkn94rb/README.md' 2023-09-26T17:52:14,148 ERROR: [present-rich] python setup.py egg_info exited with 1 2023-09-26T17:52:14,161 [bold magenta]full command[/]: [blue]/usr/bin/python3 -c ' 2023-09-26T17:52:14,161 exec(compile('"'"''"'"''"'"' 2023-09-26T17:52:14,161 # This is -- a caller that pip uses to run setup.py 2023-09-26T17:52:14,161 # 2023-09-26T17:52:14,161 # - It imports setuptools before invoking setup.py, to enable projects that directly 2023-09-26T17:52:14,161 # import from `distutils.core` to work with newer packaging standards. 2023-09-26T17:52:14,161 # - It provides a clear error message when setuptools is not installed. 2023-09-26T17:52:14,161 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2023-09-26T17:52:14,161 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2023-09-26T17:52:14,161 # manifest_maker: standard file '"'"'-c'"'"' not found". 2023-09-26T17:52:14,161 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2023-09-26T17:52:14,161 import os, sys, tokenize 2023-09-26T17:52:14,161 2023-09-26T17:52:14,161 try: 2023-09-26T17:52:14,161 import setuptools 2023-09-26T17:52:14,161 except ImportError as error: 2023-09-26T17:52:14,161 print( 2023-09-26T17:52:14,161 "ERROR: Can not execute `setup.py` since setuptools is not available in " 2023-09-26T17:52:14,161 "the build environment.", 2023-09-26T17:52:14,161 file=sys.stderr, 2023-09-26T17:52:14,161 ) 2023-09-26T17:52:14,161 sys.exit(1) 2023-09-26T17:52:14,161 2023-09-26T17:52:14,161 __file__ = %r 2023-09-26T17:52:14,161 sys.argv[0] = __file__ 2023-09-26T17:52:14,161 2023-09-26T17:52:14,161 if os.path.exists(__file__): 2023-09-26T17:52:14,161 filename = __file__ 2023-09-26T17:52:14,161 with tokenize.open(__file__) as f: 2023-09-26T17:52:14,161 setup_py_code = f.read() 2023-09-26T17:52:14,161 else: 2023-09-26T17:52:14,161 filename = "" 2023-09-26T17:52:14,161 setup_py_code = "from setuptools import setup; setup()" 2023-09-26T17:52:14,161 2023-09-26T17:52:14,161 exec(compile(setup_py_code, filename, "exec")) 2023-09-26T17:52:14,161 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-stkn94rb/ohdsi-feature-extraction_462110e224b34ea3a0f1a751e260e4dd/setup.py'"'"',), "", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-hrd0ty12[/] 2023-09-26T17:52:14,162 [bold magenta]cwd[/]: /tmp/pip-wheel-stkn94rb/ohdsi-feature-extraction_462110e224b34ea3a0f1a751e260e4dd/ 2023-09-26T17:52:14,163 Preparing metadata (setup.py): finished with status 'error' 2023-09-26T17:52:14,164 ERROR: [present-rich] metadata generation failed 2023-09-26T17:52:14,169 Exception information: 2023-09-26T17:52:14,169 Traceback (most recent call last): 2023-09-26T17:52:14,169 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 64, in generate_metadata 2023-09-26T17:52:14,169 call_subprocess( 2023-09-26T17:52:14,169 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess 2023-09-26T17:52:14,169 raise error 2023-09-26T17:52:14,169 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1 2023-09-26T17:52:14,169 2023-09-26T17:52:14,169 The above exception was the direct cause of the following exception: 2023-09-26T17:52:14,169 2023-09-26T17:52:14,169 Traceback (most recent call last): 2023-09-26T17:52:14,169 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper 2023-09-26T17:52:14,169 status = run_func(*args) 2023-09-26T17:52:14,169 ^^^^^^^^^^^^^^^ 2023-09-26T17:52:14,169 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper 2023-09-26T17:52:14,169 return func(self, options, args) 2023-09-26T17:52:14,169 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-26T17:52:14,169 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 147, in run 2023-09-26T17:52:14,169 requirement_set = resolver.resolve(reqs, check_supported_wheels=True) 2023-09-26T17:52:14,169 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-26T17:52:14,169 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 92, in resolve 2023-09-26T17:52:14,169 result = self._result = resolver.resolve( 2023-09-26T17:52:14,169 ^^^^^^^^^^^^^^^^^ 2023-09-26T17:52:14,169 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 546, in resolve 2023-09-26T17:52:14,169 state = resolution.resolve(requirements, max_rounds=max_rounds) 2023-09-26T17:52:14,169 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-26T17:52:14,169 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 397, in resolve 2023-09-26T17:52:14,169 self._add_to_criteria(self.state.criteria, r, parent=None) 2023-09-26T17:52:14,169 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria 2023-09-26T17:52:14,169 if not criterion.candidates: 2023-09-26T17:52:14,169 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/structs.py", line 156, in __bool__ 2023-09-26T17:52:14,169 return bool(self._sequence) 2023-09-26T17:52:14,169 ^^^^^^^^^^^^^^^^^^^^ 2023-09-26T17:52:14,169 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__ 2023-09-26T17:52:14,169 return any(self) 2023-09-26T17:52:14,169 ^^^^^^^^^ 2023-09-26T17:52:14,169 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in 2023-09-26T17:52:14,169 return (c for c in iterator if id(c) not in self._incompatible_ids) 2023-09-26T17:52:14,169 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-26T17:52:14,169 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built 2023-09-26T17:52:14,169 candidate = func() 2023-09-26T17:52:14,169 ^^^^^^ 2023-09-26T17:52:14,169 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 206, in _make_candidate_from_link 2023-09-26T17:52:14,169 self._link_candidate_cache[link] = LinkCandidate( 2023-09-26T17:52:14,169 ^^^^^^^^^^^^^^ 2023-09-26T17:52:14,169 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 293, in __init__ 2023-09-26T17:52:14,169 super().__init__( 2023-09-26T17:52:14,169 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 156, in __init__ 2023-09-26T17:52:14,169 self.dist = self._prepare() 2023-09-26T17:52:14,169 ^^^^^^^^^^^^^^^ 2023-09-26T17:52:14,169 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 225, in _prepare 2023-09-26T17:52:14,169 dist = self._prepare_distribution() 2023-09-26T17:52:14,169 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-26T17:52:14,169 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 304, in _prepare_distribution 2023-09-26T17:52:14,169 return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True) 2023-09-26T17:52:14,169 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-26T17:52:14,169 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 538, in prepare_linked_requirement 2023-09-26T17:52:14,169 return self._prepare_linked_requirement(req, parallel_builds) 2023-09-26T17:52:14,169 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-26T17:52:14,169 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 653, in _prepare_linked_requirement 2023-09-26T17:52:14,169 dist = _get_prepared_distribution( 2023-09-26T17:52:14,169 ^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-26T17:52:14,169 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 69, in _get_prepared_distribution 2023-09-26T17:52:14,169 abstract_dist.prepare_distribution_metadata( 2023-09-26T17:52:14,169 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/distributions/sdist.py", line 61, in prepare_distribution_metadata 2023-09-26T17:52:14,169 self.req.prepare_metadata() 2023-09-26T17:52:14,169 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/req/req_install.py", line 568, in prepare_metadata 2023-09-26T17:52:14,169 self.metadata_directory = generate_metadata_legacy( 2023-09-26T17:52:14,169 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-26T17:52:14,169 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 71, in generate_metadata 2023-09-26T17:52:14,169 raise MetadataGenerationFailed(package_details=details) from error 2023-09-26T17:52:14,169 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed 2023-09-26T17:52:14,182 Removed ohdsi-feature-extraction==0.2.4 from https://files.pythonhosted.org/packages/79/c1/ea9fdbcb75bdffb1eb9bc4dd935325e4883362ee122fa2b20d913363a9aa/ohdsi-feature-extraction-0.2.4.tar.gz from build tracker '/tmp/pip-build-tracker-2cah7fdt' 2023-09-26T17:52:14,182 Removed build tracker: '/tmp/pip-build-tracker-2cah7fdt'