2023-09-26T22:25:04,498 Created temporary directory: /tmp/pip-build-tracker-3fkmxdna 2023-09-26T22:25:04,499 Initialized build tracking at /tmp/pip-build-tracker-3fkmxdna 2023-09-26T22:25:04,499 Created build tracker: /tmp/pip-build-tracker-3fkmxdna 2023-09-26T22:25:04,500 Entered build tracker: /tmp/pip-build-tracker-3fkmxdna 2023-09-26T22:25:04,501 Created temporary directory: /tmp/pip-wheel-32n71749 2023-09-26T22:25:04,504 Created temporary directory: /tmp/pip-ephem-wheel-cache-uxylpt73 2023-09-26T22:25:04,531 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-26T22:25:04,535 2 location(s) to search for versions of libcasm-xtal: 2023-09-26T22:25:04,535 * https://pypi.org/simple/libcasm-xtal/ 2023-09-26T22:25:04,535 * https://www.piwheels.org/simple/libcasm-xtal/ 2023-09-26T22:25:04,536 Fetching project page and analyzing links: https://pypi.org/simple/libcasm-xtal/ 2023-09-26T22:25:04,537 Getting page https://pypi.org/simple/libcasm-xtal/ 2023-09-26T22:25:04,538 Found index url https://pypi.org/simple/ 2023-09-26T22:25:04,678 Fetched page https://pypi.org/simple/libcasm-xtal/ as application/vnd.pypi.simple.v1+json 2023-09-26T22:25:04,687 Found link https://files.pythonhosted.org/packages/1c/bb/b5eede847aaef2f32a6dc266529de3fa65d877fabd7ff7459b408d51d808/libcasm-xtal-2.0a1.tar.gz (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9), version: 2.0a1 2023-09-26T22:25:04,687 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/13/4b/17a39a20316632c172101fe8fb72bb3870118d3f5fd5f08ead089c8fb922/libcasm_xtal-2.0a1-cp310-cp310-macosx_10_15_x86_64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,688 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/22/6e/39005c1dfb6b18eca0d06244def75944c4b96f22ac12a4f63b756298e5b3/libcasm_xtal-2.0a1-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,689 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/e2/ea/098da1128f8c5a9cfe694e22f9314f9874072767c071ab7b9af315a912ee/libcasm_xtal-2.0a1-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,689 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/4a/62/ccacf450ecbb531af6b0a4702f27a2d882a38140e0418b989f682f142887/libcasm_xtal-2.0a1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,690 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/d2/ad/9c1ed30fbb69e0b3528574c2f8653f91afd28d13466b18be06ddfdaa75ee/libcasm_xtal-2.0a1-cp311-cp311-macosx_10_15_x86_64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,691 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/93/9a/71f543f8dfab53bb5c4f164dd61d8251f505d625438a4d631045cc153eef/libcasm_xtal-2.0a1-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,691 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/20/e3/cae0fde1077e7804ba80bc8c5b89b539bfa70534d73bcedcf6a3d17e3040/libcasm_xtal-2.0a1-cp311-cp311-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,692 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/78/9a/3a4cd66186daebd6f996b1e2e7ec73fa9527dfef8ade0ca9453121fbd303/libcasm_xtal-2.0a1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,692 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/d3/1e/f4fef83726af3cc0f3bb5a118ec6e13862b74e901bcfa5de78de8f8ee367/libcasm_xtal-2.0a1-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,693 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/e8/28/881d22340e4f2921a19881e662c270ae78960b49cdae802a7fc4ba4819b7/libcasm_xtal-2.0a1-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,694 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/41/9e/d752d7dae086a6369ecae07cc81aab4799b392f8f58b47127bd2f09534da/libcasm_xtal-2.0a1-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,694 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/e9/cb/226ac89083fb7c3f192b1bef983354e03f9c39e4734554bd285f88103de6/libcasm_xtal-2.0a1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,695 Found link https://files.pythonhosted.org/packages/c5/3a/21fbb58c1e3522a86e0012d028a28df5642e51bb115c2a041bcbec2de7fb/libcasm-xtal-2.0a2.tar.gz (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9), version: 2.0a2 2023-09-26T22:25:04,696 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/62/4d/747e8693912f4f9c09c2e7546bc5fb35b9ff447e938f3001231ffd80d6e1/libcasm_xtal-2.0a2-cp310-cp310-macosx_10_15_x86_64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,696 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/1c/20/05ff8bf1c0c8b7991cc48d2c1da7c2a22213ef4469c77820a03b2959096f/libcasm_xtal-2.0a2-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,697 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/ff/24/f05a28ae7089fd65b47bf308b286826e94ac21e84f4060fccff688aa6628/libcasm_xtal-2.0a2-cp310-cp310-manylinux2014_aarch64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,697 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/c2/3e/95718b02cf8bc42c2592a067c4bce65c330afe17c50994b0f6103104c470/libcasm_xtal-2.0a2-cp310-cp310-manylinux2014_x86_64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,698 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/c2/13/3296e5dc014e29b0bac3c23e178afa2d6d2a4a84c94a234c4d8b4d97b5f7/libcasm_xtal-2.0a2-cp311-cp311-macosx_10_15_x86_64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,699 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/f2/8b/7d6a3e3e74dc612cb2c5b21bb991575d01453fff3249e1b172a4361d12a4/libcasm_xtal-2.0a2-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,699 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/4a/8c/28b2e31b5f997a2f41ab0aa848ed6f4fdf720f1b5f5503212642b69eabe5/libcasm_xtal-2.0a2-cp311-cp311-manylinux2014_aarch64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,700 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/c2/82/8a4f29a52bf2c82fcab6b01ed973fc2d1266eba729f760745ab4a96c867c/libcasm_xtal-2.0a2-cp311-cp311-manylinux2014_x86_64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,700 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/9d/65/a344993e9fec8de2eb939cda81e71e93d3f67de16bbbbfe9c5dbf8dcac6f/libcasm_xtal-2.0a2-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,701 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/b2/87/9e0863f66d252ca4beec6c13b4cb4b489b87d72c9fd55b95ced03c68dd14/libcasm_xtal-2.0a2-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,702 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/a6/25/fccc1f2d5d4e99271d4eed1099a38d3c675081561f3951c0e9aee734fe79/libcasm_xtal-2.0a2-cp39-cp39-manylinux2014_aarch64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,702 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/38/c9/e0ff6c74cf957c597e0dea35b4983b1ebd9a0c7f8526ca3e23c69d32a8d3/libcasm_xtal-2.0a2-cp39-cp39-manylinux2014_x86_64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,703 Found link https://files.pythonhosted.org/packages/6e/e5/1bd8e1852e537bb8b3b9ebc336deada42827af7032c2db146146e527f392/libcasm-xtal-2.0a3.tar.gz (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9), version: 2.0a3 2023-09-26T22:25:04,704 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/8e/0f/6bea070bc1422f41b4c333938d7826c39053a24a53aafc761ad4501b371a/libcasm_xtal-2.0a3-cp310-cp310-macosx_10_15_x86_64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,704 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/bb/7a/1c576aa25fb4a90910914a98d80b402f1daff7c545e20a736f8dea6aa950/libcasm_xtal-2.0a3-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,705 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/44/36/f869828a5ccffa7d4fa0ef7ee9e4fbc759061124ee3cc5f20e643bdcc7ac/libcasm_xtal-2.0a3-cp310-cp310-manylinux2014_aarch64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,705 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/78/de/f2b6f055eb713531d03749daf71307e0259d1938e57fdae3b126d0e7cc6c/libcasm_xtal-2.0a3-cp310-cp310-manylinux2014_x86_64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,706 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/27/ad/4274019d5157a7a6c3e6a178fc96027ac520083c7f445e6cd39ed3233417/libcasm_xtal-2.0a3-cp311-cp311-macosx_10_15_x86_64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,707 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/3f/54/f12fc8e5f314121673a08589f4f8bacc21dbbf9579d5b606c2b4f3311ed7/libcasm_xtal-2.0a3-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,707 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/16/9a/e2b6f4cfc3acff259a80038fc641c7da08222c27eda627e70e12d694e9b8/libcasm_xtal-2.0a3-cp311-cp311-manylinux2014_aarch64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,708 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/e7/af/f50689212fe3253641341beceb79cb16923cf70d577d3f600dd87df936f6/libcasm_xtal-2.0a3-cp311-cp311-manylinux2014_x86_64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,708 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/1c/6d/666c55fac349f178cbd8a575e86bb9e4c919c952ab10ab3b5d90be75df25/libcasm_xtal-2.0a3-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,709 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/38/36/c2bf7b3cbcb0182aebb18e9a2c057c7ac6db18c2d8fa33ad62a7f29d0dba/libcasm_xtal-2.0a3-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,710 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/01/7d/ddbc689ec2670175662a843da8e2b34e2578ca8664afb41a84ee28e37b58/libcasm_xtal-2.0a3-cp39-cp39-manylinux2014_aarch64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,710 Skipping link: No binaries permitted for libcasm-xtal: https://files.pythonhosted.org/packages/6d/04/6866e8d239b319dd11b333e0d3f8923059bc83d6c8bf8835efc88d211bc9/libcasm_xtal-2.0a3-cp39-cp39-manylinux2014_x86_64.whl (from https://pypi.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,711 Fetching project page and analyzing links: https://www.piwheels.org/simple/libcasm-xtal/ 2023-09-26T22:25:04,711 Getting page https://www.piwheels.org/simple/libcasm-xtal/ 2023-09-26T22:25:04,712 Found index url https://www.piwheels.org/simple/ 2023-09-26T22:25:04,873 Fetched page https://www.piwheels.org/simple/libcasm-xtal/ as text/html 2023-09-26T22:25:04,877 Skipping link: No binaries permitted for libcasm-xtal: https://www.piwheels.org/simple/libcasm-xtal/libcasm_xtal-2.0a3-cp39-cp39-linux_armv7l.whl#sha256=17d9c9a8bc8c3c7b90d96a88e1ca71a7913137d0bc73d686eb31cc5d22304d21 (from https://www.piwheels.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,877 Skipping link: No binaries permitted for libcasm-xtal: https://www.piwheels.org/simple/libcasm-xtal/libcasm_xtal-2.0a3-cp39-cp39-linux_armv6l.whl#sha256=17d9c9a8bc8c3c7b90d96a88e1ca71a7913137d0bc73d686eb31cc5d22304d21 (from https://www.piwheels.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,878 Skipping link: No binaries permitted for libcasm-xtal: https://www.piwheels.org/simple/libcasm-xtal/libcasm_xtal-2.0a2-cp311-cp311-linux_armv7l.whl#sha256=e6c9e408031b67b42049394a50a4d77ece2a6fabc320d31e40a1802be19455bf (from https://www.piwheels.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,878 Skipping link: No binaries permitted for libcasm-xtal: https://www.piwheels.org/simple/libcasm-xtal/libcasm_xtal-2.0a2-cp311-cp311-linux_armv6l.whl#sha256=e6c9e408031b67b42049394a50a4d77ece2a6fabc320d31e40a1802be19455bf (from https://www.piwheels.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,879 Skipping link: No binaries permitted for libcasm-xtal: https://www.piwheels.org/simple/libcasm-xtal/libcasm_xtal-2.0a2-cp39-cp39-linux_armv7l.whl#sha256=9af17ebfc17fe6d54af2f0a41b721b8f11c87dd382f03ff1475b912f95c32784 (from https://www.piwheels.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,880 Skipping link: No binaries permitted for libcasm-xtal: https://www.piwheels.org/simple/libcasm-xtal/libcasm_xtal-2.0a2-cp39-cp39-linux_armv6l.whl#sha256=9af17ebfc17fe6d54af2f0a41b721b8f11c87dd382f03ff1475b912f95c32784 (from https://www.piwheels.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,880 Skipping link: No binaries permitted for libcasm-xtal: https://www.piwheels.org/simple/libcasm-xtal/libcasm_xtal-2.0a1-cp311-cp311-linux_armv7l.whl#sha256=8e86e62fed97c01558bef8f3170f74cca10b620807ed01dd77eb97d3e2e95f12 (from https://www.piwheels.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,881 Skipping link: No binaries permitted for libcasm-xtal: https://www.piwheels.org/simple/libcasm-xtal/libcasm_xtal-2.0a1-cp311-cp311-linux_armv6l.whl#sha256=8e86e62fed97c01558bef8f3170f74cca10b620807ed01dd77eb97d3e2e95f12 (from https://www.piwheels.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,881 Skipping link: No binaries permitted for libcasm-xtal: https://www.piwheels.org/simple/libcasm-xtal/libcasm_xtal-2.0a1-cp39-cp39-linux_armv7l.whl#sha256=1eb110f5be7d43f6b87e29de70b391c22d645ea7fac17d2ea396d0f41e6bee7d (from https://www.piwheels.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,882 Skipping link: No binaries permitted for libcasm-xtal: https://www.piwheels.org/simple/libcasm-xtal/libcasm_xtal-2.0a1-cp39-cp39-linux_armv6l.whl#sha256=1eb110f5be7d43f6b87e29de70b391c22d645ea7fac17d2ea396d0f41e6bee7d (from https://www.piwheels.org/simple/libcasm-xtal/) (requires-python:>=3.9) 2023-09-26T22:25:04,883 Skipping link: not a file: https://www.piwheels.org/simple/libcasm-xtal/ 2023-09-26T22:25:04,883 Skipping link: not a file: https://pypi.org/simple/libcasm-xtal/ 2023-09-26T22:25:04,901 Given no hashes to check 1 links for project 'libcasm-xtal': discarding no candidates 2023-09-26T22:25:04,919 Collecting libcasm-xtal==2.0a3 2023-09-26T22:25:04,922 Created temporary directory: /tmp/pip-unpack-72d70lv7 2023-09-26T22:25:05,064 Downloading libcasm-xtal-2.0a3.tar.gz (668 kB) 2023-09-26T22:25:05,641 Added libcasm-xtal==2.0a3 from https://files.pythonhosted.org/packages/6e/e5/1bd8e1852e537bb8b3b9ebc336deada42827af7032c2db146146e527f392/libcasm-xtal-2.0a3.tar.gz to build tracker '/tmp/pip-build-tracker-3fkmxdna' 2023-09-26T22:25:05,651 Created temporary directory: /tmp/pip-build-env-u66ilrb5 2023-09-26T22:25:05,656 Installing build dependencies: started 2023-09-26T22:25:05,657 Running command pip subprocess to install build dependencies 2023-09-26T22:25:06,793 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-09-26T22:25:07,307 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-26T22:25:07,969 Collecting pip 2023-09-26T22:25:08,137 Using cached https://www.piwheels.org/simple/pip/pip-23.2.1-py3-none-any.whl (2.1 MB) 2023-09-26T22:25:09,483 Collecting setuptools>=42 2023-09-26T22:25:09,484 Obtaining dependency information for setuptools>=42 from https://files.pythonhosted.org/packages/bb/26/7945080113158354380a12ce26873dd6c1ebd88d47f5bc24e2c5bb38c16a/setuptools-68.2.2-py3-none-any.whl.metadata 2023-09-26T22:25:09,490 Using cached setuptools-68.2.2-py3-none-any.whl.metadata (6.3 kB) 2023-09-26T22:25:09,617 Collecting scikit-build 2023-09-26T22:25:09,635 Using cached https://www.piwheels.org/simple/scikit-build/scikit_build-0.17.6-py3-none-any.whl (84 kB) 2023-09-26T22:25:10,395 Collecting cmake>=3.20 2023-09-26T22:25:11,597 Using cached https://www.piwheels.org/simple/cmake/cmake-3.25.0-cp311-cp311-linux_armv7l.whl (17.2 MB) 2023-09-26T22:25:12,362 Collecting ninja 2023-09-26T22:25:12,385 Using cached https://www.piwheels.org/simple/ninja/ninja-1.11.1-cp311-cp311-linux_armv7l.whl (134 kB) 2023-09-26T22:25:12,564 Collecting pybind11>=2.6 2023-09-26T22:25:12,594 Using cached https://www.piwheels.org/simple/pybind11/pybind11-2.11.1-py3-none-any.whl (227 kB) 2023-09-26T22:25:12,689 Collecting libcasm-global>=2.0.2 2023-09-26T22:25:12,703 Downloading https://www.piwheels.org/simple/libcasm-global/libcasm_global-2.0.3-cp311-cp311-linux_armv7l.whl (1.9 MB) 2023-09-26T22:25:13,162 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.9/1.9 MB 4.2 MB/s eta 0:00:00 2023-09-26T22:25:13,501 Collecting distro (from scikit-build) 2023-09-26T22:25:13,517 Using cached https://www.piwheels.org/simple/distro/distro-1.8.0-py3-none-any.whl (20 kB) 2023-09-26T22:25:13,759 Collecting packaging (from scikit-build) 2023-09-26T22:25:13,775 Using cached https://www.piwheels.org/simple/packaging/packaging-23.1-py3-none-any.whl (48 kB) 2023-09-26T22:25:13,987 Collecting wheel>=0.32.0 (from scikit-build) 2023-09-26T22:25:14,005 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB) 2023-09-26T22:25:14,807 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/3a/be/650f9c091ef71cb01d735775d554e068752d3ff63d7943b26316dc401749/numpy-1.21.2.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2023-09-26T22:25:14,816 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/5f/d6/ad58ded26556eaeaa8c971e08b6466f17c4ac4d786cd3d800e26ce59cc01/numpy-1.21.3.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2023-09-26T22:25:14,823 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/fb/48/b0708ebd7718a8933f0d3937513ef8ef2f4f04529f1f66ca86d873043921/numpy-1.21.4.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2023-09-26T22:25:14,830 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/c2/a8/a924a09492bdfee8c2ec3094d0a13f2799800b4fdc9c890738aeeb12c72e/numpy-1.21.5.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2023-09-26T22:25:14,838 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/45/b7/de7b8e67f2232c26af57c205aaad29fe17754f793404f59c8a730c7a191a/numpy-1.21.6.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2023-09-26T22:25:15,215 Collecting numpy (from libcasm-global>=2.0.2) 2023-09-26T22:25:16,157 Using cached https://www.piwheels.org/simple/numpy/numpy-1.25.2-cp311-cp311-linux_armv7l.whl (12.5 MB) 2023-09-26T22:25:16,582 Using cached setuptools-68.2.2-py3-none-any.whl (807 kB) 2023-09-26T22:25:19,345 Installing collected packages: ninja, cmake, wheel, setuptools, pybind11, pip, packaging, numpy, distro, scikit-build, libcasm-global 2023-09-26T22:25:19,399 Creating /tmp/pip-build-env-u66ilrb5/overlay/local/bin 2023-09-26T22:25:19,402 changing mode of /tmp/pip-build-env-u66ilrb5/overlay/local/bin/ninja to 755 2023-09-26T22:25:26,396 changing mode of /tmp/pip-build-env-u66ilrb5/overlay/local/bin/cmake to 755 2023-09-26T22:25:26,398 changing mode of /tmp/pip-build-env-u66ilrb5/overlay/local/bin/cpack to 755 2023-09-26T22:25:26,400 changing mode of /tmp/pip-build-env-u66ilrb5/overlay/local/bin/ctest to 755 2023-09-26T22:25:26,725 changing mode of /tmp/pip-build-env-u66ilrb5/overlay/local/bin/wheel to 755 2023-09-26T22:25:30,438 changing mode of /tmp/pip-build-env-u66ilrb5/overlay/local/bin/pybind11-config to 755 2023-09-26T22:25:38,355 changing mode of /tmp/pip-build-env-u66ilrb5/overlay/local/bin/pip to 755 2023-09-26T22:25:38,357 changing mode of /tmp/pip-build-env-u66ilrb5/overlay/local/bin/pip3 to 755 2023-09-26T22:25:38,360 changing mode of /tmp/pip-build-env-u66ilrb5/overlay/local/bin/pip3.11 to 755 2023-09-26T22:25:47,103 changing mode of /tmp/pip-build-env-u66ilrb5/overlay/local/bin/f2py to 755 2023-09-26T22:25:47,105 changing mode of /tmp/pip-build-env-u66ilrb5/overlay/local/bin/f2py3 to 755 2023-09-26T22:25:47,107 changing mode of /tmp/pip-build-env-u66ilrb5/overlay/local/bin/f2py3.11 to 755 2023-09-26T22:25:47,172 changing mode of /tmp/pip-build-env-u66ilrb5/overlay/local/bin/distro to 755 2023-09-26T22:25:48,450 Successfully installed cmake-3.25.0 distro-1.8.0 libcasm-global-2.0.3 ninja-1.11.1 numpy-1.25.2 packaging-23.1 pip-23.2.1 pybind11-2.11.1 scikit-build-0.17.6 setuptools-68.2.2 wheel-0.41.2 2023-09-26T22:25:49,149 Installing build dependencies: finished with status 'done' 2023-09-26T22:25:49,152 Getting requirements to build wheel: started 2023-09-26T22:25:49,153 Running command Getting requirements to build wheel 2023-09-26T22:25:50,094 running egg_info 2023-09-26T22:25:50,101 writing python/libcasm_xtal.egg-info/PKG-INFO 2023-09-26T22:25:50,104 writing dependency_links to python/libcasm_xtal.egg-info/dependency_links.txt 2023-09-26T22:25:50,105 writing requirements to python/libcasm_xtal.egg-info/requires.txt 2023-09-26T22:25:50,107 writing top-level names to python/libcasm_xtal.egg-info/top_level.txt 2023-09-26T22:25:50,119 reading manifest file 'python/libcasm_xtal.egg-info/SOURCES.txt' 2023-09-26T22:25:50,149 reading manifest template 'MANIFEST.in' 2023-09-26T22:25:50,167 no previously-included directories found matching 'python/doc/_build' 2023-09-26T22:25:50,168 no previously-included directories found matching 'python/doc/reference/libcasm/_autosummary' 2023-09-26T22:25:50,172 warning: no files found matching '*.in' under directory 'python/libcasm' 2023-09-26T22:25:50,180 warning: no files found matching 'CONTRIBUTE.md' 2023-09-26T22:25:50,181 adding license file 'LICENSE' 2023-09-26T22:25:50,191 writing manifest file 'python/libcasm_xtal.egg-info/SOURCES.txt' 2023-09-26T22:25:50,316 Getting requirements to build wheel: finished with status 'done' 2023-09-26T22:25:50,336 Created temporary directory: /tmp/pip-modern-metadata-bm_tzg59 2023-09-26T22:25:50,341 Preparing metadata (pyproject.toml): started 2023-09-26T22:25:50,342 Running command Preparing metadata (pyproject.toml) 2023-09-26T22:25:51,239 running dist_info 2023-09-26T22:25:51,241 creating /tmp/pip-modern-metadata-bm_tzg59/libcasm_xtal.egg-info 2023-09-26T22:25:51,248 writing /tmp/pip-modern-metadata-bm_tzg59/libcasm_xtal.egg-info/PKG-INFO 2023-09-26T22:25:51,252 writing dependency_links to /tmp/pip-modern-metadata-bm_tzg59/libcasm_xtal.egg-info/dependency_links.txt 2023-09-26T22:25:51,254 writing requirements to /tmp/pip-modern-metadata-bm_tzg59/libcasm_xtal.egg-info/requires.txt 2023-09-26T22:25:51,256 writing top-level names to /tmp/pip-modern-metadata-bm_tzg59/libcasm_xtal.egg-info/top_level.txt 2023-09-26T22:25:51,258 writing manifest file '/tmp/pip-modern-metadata-bm_tzg59/libcasm_xtal.egg-info/SOURCES.txt' 2023-09-26T22:25:51,268 reading manifest file '/tmp/pip-modern-metadata-bm_tzg59/libcasm_xtal.egg-info/SOURCES.txt' 2023-09-26T22:25:51,270 reading manifest template 'MANIFEST.in' 2023-09-26T22:25:51,283 no previously-included directories found matching 'python/doc/_build' 2023-09-26T22:25:51,283 no previously-included directories found matching 'python/doc/reference/libcasm/_autosummary' 2023-09-26T22:25:51,287 warning: no files found matching '*.in' under directory 'python/libcasm' 2023-09-26T22:25:51,296 warning: no files found matching 'CONTRIBUTE.md' 2023-09-26T22:25:51,297 adding license file 'LICENSE' 2023-09-26T22:25:51,305 writing manifest file '/tmp/pip-modern-metadata-bm_tzg59/libcasm_xtal.egg-info/SOURCES.txt' 2023-09-26T22:25:51,307 creating '/tmp/pip-modern-metadata-bm_tzg59/libcasm_xtal-2.0a3.dist-info' 2023-09-26T22:25:51,452 Preparing metadata (pyproject.toml): finished with status 'done' 2023-09-26T22:25:51,457 Source in /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e has version 2.0a3, which satisfies requirement libcasm-xtal==2.0a3 from https://files.pythonhosted.org/packages/6e/e5/1bd8e1852e537bb8b3b9ebc336deada42827af7032c2db146146e527f392/libcasm-xtal-2.0a3.tar.gz 2023-09-26T22:25:51,458 Removed libcasm-xtal==2.0a3 from https://files.pythonhosted.org/packages/6e/e5/1bd8e1852e537bb8b3b9ebc336deada42827af7032c2db146146e527f392/libcasm-xtal-2.0a3.tar.gz from build tracker '/tmp/pip-build-tracker-3fkmxdna' 2023-09-26T22:25:51,463 Created temporary directory: /tmp/pip-unpack-plvezro1 2023-09-26T22:25:51,464 Created temporary directory: /tmp/pip-unpack-x1jtjt5r 2023-09-26T22:25:51,469 Building wheels for collected packages: libcasm-xtal 2023-09-26T22:25:51,473 Created temporary directory: /tmp/pip-wheel-uaqde29x 2023-09-26T22:25:51,474 Destination directory: /tmp/pip-wheel-uaqde29x 2023-09-26T22:25:51,477 Building wheel for libcasm-xtal (pyproject.toml): started 2023-09-26T22:25:51,478 Running command Building wheel for libcasm-xtal (pyproject.toml) 2023-09-26T22:25:52,628 -------------------------------------------------------------------------------- 2023-09-26T22:25:52,629 -- Trying 'Ninja' generator 2023-09-26T22:25:52,629 -------------------------------- 2023-09-26T22:25:52,630 --------------------------- 2023-09-26T22:25:52,631 ---------------------- 2023-09-26T22:25:52,632 ----------------- 2023-09-26T22:25:52,633 ------------ 2023-09-26T22:25:52,634 ------- 2023-09-26T22:25:52,635 -- 2023-09-26T22:25:52,652 Not searching for unused variables given on the command line. 2023-09-26T22:25:53,153 -- The C compiler identification is GNU 12.2.0 2023-09-26T22:25:53,196 -- Detecting C compiler ABI info 2023-09-26T22:25:53,488 -- Detecting C compiler ABI info - done 2023-09-26T22:25:53,529 -- Check for working C compiler: /usr/bin/cc - skipped 2023-09-26T22:25:53,531 -- Detecting C compile features 2023-09-26T22:25:53,533 -- Detecting C compile features - done 2023-09-26T22:25:53,834 -- The CXX compiler identification is GNU 12.2.0 2023-09-26T22:25:53,870 -- Detecting CXX compiler ABI info 2023-09-26T22:25:54,475 -- Detecting CXX compiler ABI info - done 2023-09-26T22:25:54,520 -- Check for working CXX compiler: /usr/bin/c++ - skipped 2023-09-26T22:25:54,522 -- Detecting CXX compile features 2023-09-26T22:25:54,524 -- Detecting CXX compile features - done 2023-09-26T22:25:54,531 -- Configuring done 2023-09-26T22:25:54,540 -- Generating done 2023-09-26T22:25:54,564 -- Build files have been written to: /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/_cmake_test_compile/build 2023-09-26T22:25:54,571 -- 2023-09-26T22:25:54,572 ------- 2023-09-26T22:25:54,572 ------------ 2023-09-26T22:25:54,573 ----------------- 2023-09-26T22:25:54,573 ---------------------- 2023-09-26T22:25:54,573 --------------------------- 2023-09-26T22:25:54,574 -------------------------------- 2023-09-26T22:25:54,574 -- Trying 'Ninja' generator - success 2023-09-26T22:25:54,575 -------------------------------------------------------------------------------- 2023-09-26T22:25:54,831 Configuring Project 2023-09-26T22:25:54,832 Working directory: 2023-09-26T22:25:54,832 /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/_skbuild/linux-armv7l-3.11/cmake-build 2023-09-26T22:25:54,833 Command: 2023-09-26T22:25:54,833 /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/cmake/data/bin/cmake /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e -G Ninja -DCMAKE_MAKE_PROGRAM:FILEPATH=/tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/ninja/data/bin/ninja --no-warn-unused-cli -DCMAKE_INSTALL_PREFIX:PATH=/tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/_skbuild/linux-armv7l-3.11/cmake-install/python/libcasm -DPYTHON_VERSION_STRING:STRING=3.11.2 -DSKBUILD:INTERNAL=TRUE -DCMAKE_MODULE_PATH:PATH=/tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/skbuild/resources/cmake -DPYTHON_EXECUTABLE:PATH=/usr/bin/python3 -DPYTHON_INCLUDE_DIR:PATH=/usr/include/python3.11 -DPYTHON_LIBRARY:PATH=/usr/lib/arm-linux-gnueabihf/libpython3.11.so -DPython_EXECUTABLE:PATH=/usr/bin/python3 -DPython_ROOT_DIR:PATH=/usr -DPython_FIND_REGISTRY:STRING=NEVER -DPython_INCLUDE_DIR:PATH=/usr/include/python3.11 -DPython_NumPy_INCLUDE_DIRS:PATH=/tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/numpy/core/include -DPython3_EXECUTABLE:PATH=/usr/bin/python3 -DPython3_ROOT_DIR:PATH=/usr -DPython3_FIND_REGISTRY:STRING=NEVER -DPython3_INCLUDE_DIR:PATH=/usr/include/python3.11 -DPython3_NumPy_INCLUDE_DIRS:PATH=/tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/numpy/core/include -DCMAKE_MAKE_PROGRAM:FILEPATH=/tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/ninja/data/bin/ninja -DCMAKE_BUILD_TYPE:STRING=Release 2023-09-26T22:25:54,853 Not searching for unused variables given on the command line. 2023-09-26T22:25:55,166 -- The CXX compiler identification is GNU 12.2.0 2023-09-26T22:25:55,211 -- Detecting CXX compiler ABI info 2023-09-26T22:25:55,517 -- Detecting CXX compiler ABI info - done 2023-09-26T22:25:55,555 -- Check for working CXX compiler: /usr/bin/c++ - skipped 2023-09-26T22:25:55,556 -- Detecting CXX compile features 2023-09-26T22:25:55,559 -- Detecting CXX compile features - done 2023-09-26T22:25:55,664 -- Found ZLIB: /usr/lib/arm-linux-gnueabihf/libz.so (found version "1.2.13") 2023-09-26T22:25:55,665 -- CASM_PREFIX not defined 2023-09-26T22:25:58,373 -- Found Python: /usr/bin/python3 (found version "3.11.2") found components: Interpreter Development Development.Module Development.Embed 2023-09-26T22:25:58,374 -- found Python_EXECUTABLE: /usr/bin/python3 2023-09-26T22:25:58,374 -- checking for libcasm-global 2023-09-26T22:25:59,994 -- found libcasm-global 2023-09-26T22:26:00,139 -- CASM_PREFIX: /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/libcasm 2023-09-26T22:26:00,489 -- Performing Test HAS_FLTO 2023-09-26T22:26:01,211 -- Performing Test HAS_FLTO - Success 2023-09-26T22:26:01,216 -- Found pybind11: /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/pybind11/include (found version "2.11.1") 2023-09-26T22:26:01,219 -- Configuring done 2023-09-26T22:26:01,299 -- Generating done 2023-09-26T22:26:01,326 -- Build files have been written to: /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/_skbuild/linux-armv7l-3.11/cmake-build 2023-09-26T22:26:15,016 [1/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/Superlattice.cc.o 2023-09-26T22:26:24,760 [2/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/IntegralCoordinateWithin.cc.o 2023-09-26T22:26:29,152 [3/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/Strain.cc.o 2023-09-26T22:26:31,924 [4/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/LatticeMap.cc.o 2023-09-26T22:26:51,256 [5/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/AnisoValTraits.cc.o 2023-09-26T22:27:04,620 [6/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/LinearIndexConverter.cc.o 2023-09-26T22:27:10,419 [7/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/UnitCellCoord.cc.o 2023-09-26T22:27:17,846 [8/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/BasicStructure.cc.o 2023-09-26T22:27:17,847 In file included from /usr/include/c++/12/vector:70, 2023-09-26T22:27:17,848 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/BasicStructure.hh:9, 2023-09-26T22:27:17,849 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/BasicStructure.cc:1: 2023-09-26T22:27:17,850 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2023-09-26T22:27:17,851 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-26T22:27:17,852 439 | vector<_Tp, _Alloc>:: 2023-09-26T22:27:17,853 | ^~~~~~~~~~~~~~~~~~~ 2023-09-26T22:27:17,854 In file included from /usr/include/c++/12/vector:63: 2023-09-26T22:27:17,855 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*]’: 2023-09-26T22:27:17,855 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:27:17,856 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-26T22:27:17,857 | ^~~~~~~~~~~~~~~~ 2023-09-26T22:27:17,858 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:27:17,859 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*; bool _TrivialValueTypes = false]’, 2023-09-26T22:27:17,861 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-26T22:27:17,862 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*; _Tp = CASM::xtal::AtomPosition]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-26T22:27:17,862 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = CASM::xtal::AtomPosition; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-26T22:27:17,863 inlined from ‘CASM::xtal::Molecule::Molecule(const CASM::xtal::Molecule&)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/Molecule.hh:80:7: 2023-09-26T22:27:17,864 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:27:17,865 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-26T22:27:17,866 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:27:17,867 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*; bool _TrivialValueTypes = false]’, 2023-09-26T22:27:17,868 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-26T22:27:17,869 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*; _Tp = CASM::xtal::AtomPosition]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-26T22:27:17,870 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = CASM::xtal::AtomPosition; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-26T22:27:17,872 inlined from ‘CASM::xtal::Molecule::Molecule(const CASM::xtal::Molecule&)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/Molecule.hh:80:7, 2023-09-26T22:27:17,873 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = CASM::xtal::Molecule; _Args = {const CASM::xtal::Molecule&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-26T22:27:17,883 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::Molecule*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21, 2023-09-26T22:27:17,893 inlined from ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::Molecule*; bool _TrivialValueTypes = false]’ at /usr/include/c++/12/bits/stl_uninitialized.h:137:32, 2023-09-26T22:27:17,894 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::Molecule*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-26T22:27:17,895 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::Molecule*; _Tp = CASM::xtal::Molecule]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-26T22:27:17,896 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = CASM::xtal::Molecule; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-26T22:27:17,897 inlined from ‘CASM::xtal::Site::Site(const CASM::xtal::Site&)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/Site.hh:23:7, 2023-09-26T22:27:17,898 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = CASM::xtal::Site; _Args = {const CASM::xtal::Site&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-26T22:27:17,899 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = const CASM::xtal::Site*; _ForwardIterator = CASM::xtal::Site*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21: 2023-09-26T22:27:17,900 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:27:17,901 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-26T22:27:17,902 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:27:17,904 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*; bool _TrivialValueTypes = false]’, 2023-09-26T22:27:17,905 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-26T22:27:17,905 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*; _Tp = CASM::xtal::AtomPosition]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-26T22:27:17,906 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = CASM::xtal::AtomPosition; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-26T22:27:17,907 inlined from ‘CASM::xtal::Molecule::Molecule(const CASM::xtal::Molecule&)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/Molecule.hh:80:7, 2023-09-26T22:27:17,909 inlined from ‘void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = CASM::xtal::Molecule; _Args = {const CASM::xtal::Molecule&}; _Tp = CASM::xtal::Molecule]’ at /usr/include/c++/12/bits/new_allocator.h:175:4, 2023-09-26T22:27:17,910 inlined from ‘static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = CASM::xtal::Molecule; _Args = {const CASM::xtal::Molecule&}; _Tp = CASM::xtal::Molecule]’ at /usr/include/c++/12/bits/alloc_traits.h:516:17, 2023-09-26T22:27:17,910 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = CASM::xtal::Molecule; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1281:30, 2023-09-26T22:27:17,911 inlined from ‘std::vector CASM::xtal::struc_molecule(const BasicStructure&)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/BasicStructure.cc:415:34: 2023-09-26T22:27:17,933 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:27:17,934 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-26T22:27:17,935 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:27:17,936 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*; bool _TrivialValueTypes = false]’, 2023-09-26T22:27:17,937 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-26T22:27:17,938 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*; _Tp = CASM::xtal::AtomPosition]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-26T22:27:17,939 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = CASM::xtal::AtomPosition; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-26T22:27:17,940 inlined from ‘CASM::xtal::Molecule::Molecule(const CASM::xtal::Molecule&)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/Molecule.hh:80:7, 2023-09-26T22:27:17,941 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = CASM::xtal::Molecule; _Args = {const CASM::xtal::Molecule&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-26T22:27:17,942 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::Molecule*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21, 2023-09-26T22:27:17,943 inlined from ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::Molecule*; bool _TrivialValueTypes = false]’ at /usr/include/c++/12/bits/stl_uninitialized.h:137:32, 2023-09-26T22:27:17,945 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::Molecule*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-26T22:27:17,945 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::Molecule*; _Tp = CASM::xtal::Molecule]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-26T22:27:17,946 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = CASM::xtal::Molecule; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-26T22:27:17,947 inlined from ‘CASM::xtal::Site::Site(const CASM::xtal::Site&)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/Site.hh:23:7: 2023-09-26T22:27:17,948 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:27:17,949 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-26T22:27:17,950 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:27:17,951 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const CASM::xtal::Site&}; _Tp = CASM::xtal::Site; _Alloc = std::allocator]’: 2023-09-26T22:27:17,951 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-26T22:27:17,952 439 | vector<_Tp, _Alloc>:: 2023-09-26T22:27:17,953 | ^~~~~~~~~~~~~~~~~~~ 2023-09-26T22:27:17,955 In file included from /usr/include/c++/12/vector:64: 2023-09-26T22:27:17,956 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = CASM::xtal::Site; _Alloc = std::allocator]’, 2023-09-26T22:27:17,957 inlined from ‘void CASM::xtal::BasicStructure::push_back(const CASM::xtal::Site&, CASM::COORD_TYPE)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/BasicStructure.cc:107:20: 2023-09-26T22:27:17,958 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:27:17,959 1287 | _M_realloc_insert(end(), __x); 2023-09-26T22:27:17,959 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-26T22:27:17,960 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, 2023-09-26T22:27:17,961 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-26T22:27:17,963 inlined from ‘void CASM::xtal::BasicStructure::read(std::istream&, double)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/BasicStructure.cc:190:25: 2023-09-26T22:27:17,964 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:27:17,965 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-26T22:27:17,966 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:27:17,966 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*; bool _TrivialValueTypes = false]’, 2023-09-26T22:27:17,967 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-26T22:27:17,968 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*; _Tp = CASM::xtal::AtomPosition]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-26T22:27:17,969 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = CASM::xtal::AtomPosition; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-26T22:27:17,970 inlined from ‘CASM::xtal::Molecule::Molecule(const CASM::xtal::Molecule&)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/Molecule.hh:80:7, 2023-09-26T22:27:17,971 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = CASM::xtal::Molecule; _Args = {const CASM::xtal::Molecule&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-26T22:27:17,972 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::Molecule*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21, 2023-09-26T22:27:17,975 inlined from ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::Molecule*; bool _TrivialValueTypes = false]’ at /usr/include/c++/12/bits/stl_uninitialized.h:137:32, 2023-09-26T22:27:17,976 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::Molecule*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-26T22:27:17,977 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::Molecule*; _Tp = CASM::xtal::Molecule]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-26T22:27:17,978 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = CASM::xtal::Molecule; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-26T22:27:17,979 inlined from ‘CASM::xtal::Site::Site(const CASM::xtal::Site&)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/Site.hh:23:7, 2023-09-26T22:27:17,980 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = CASM::xtal::Site; _Args = {const CASM::xtal::Site&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-26T22:27:17,993 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::Site*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21, 2023-09-26T22:27:17,994 inlined from ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::Site*; bool _TrivialValueTypes = false]’ at /usr/include/c++/12/bits/stl_uninitialized.h:137:32, 2023-09-26T22:27:17,995 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::Site*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-26T22:27:17,996 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::Site*; _Tp = CASM::xtal::Site]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-26T22:27:17,997 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = CASM::xtal::Site; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-26T22:27:17,998 inlined from ‘CASM::xtal::BasicStructure::BasicStructure(const CASM::xtal::BasicStructure&)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/BasicStructure.cc:33:7: 2023-09-26T22:27:18,000 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:27:18,001 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-26T22:27:18,001 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:27:18,002 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*; bool _TrivialValueTypes = false]’, 2023-09-26T22:27:18,003 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-26T22:27:18,004 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*; _Tp = CASM::xtal::AtomPosition]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-26T22:27:18,005 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = CASM::xtal::AtomPosition; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-26T22:27:18,007 inlined from ‘CASM::xtal::Molecule::Molecule(const CASM::xtal::Molecule&)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/Molecule.hh:80:7, 2023-09-26T22:27:18,007 inlined from ‘void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = CASM::xtal::Molecule; _Args = {const CASM::xtal::Molecule&}; _Tp = CASM::xtal::Molecule]’ at /usr/include/c++/12/bits/new_allocator.h:175:4, 2023-09-26T22:27:18,008 inlined from ‘static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = CASM::xtal::Molecule; _Args = {const CASM::xtal::Molecule&}; _Tp = CASM::xtal::Molecule]’ at /usr/include/c++/12/bits/alloc_traits.h:516:17, 2023-09-26T22:27:18,009 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = CASM::xtal::Molecule; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1281:30, 2023-09-26T22:27:18,010 inlined from ‘std::vector > > CASM::xtal::allowed_molecule_unique_names(const BasicStructure&)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/BasicStructure.cc:453:39: 2023-09-26T22:27:18,011 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:27:18,012 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-26T22:27:18,013 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:27:18,014 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*; bool _TrivialValueTypes = false]’, 2023-09-26T22:27:18,015 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-26T22:27:18,016 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*; _Tp = CASM::xtal::AtomPosition]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-26T22:27:18,017 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = CASM::xtal::AtomPosition; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-26T22:27:18,018 inlined from ‘CASM::xtal::Molecule::Molecule(const CASM::xtal::Molecule&)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/Molecule.hh:80:7, 2023-09-26T22:27:18,033 inlined from ‘void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = CASM::xtal::Molecule; _Args = {const CASM::xtal::Molecule&}; _Tp = CASM::xtal::Molecule]’ at /usr/include/c++/12/bits/new_allocator.h:175:4, 2023-09-26T22:27:18,034 inlined from ‘static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = CASM::xtal::Molecule; _Args = {const CASM::xtal::Molecule&}; _Tp = CASM::xtal::Molecule]’ at /usr/include/c++/12/bits/alloc_traits.h:516:17, 2023-09-26T22:27:18,036 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = CASM::xtal::Molecule; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1281:30, 2023-09-26T22:27:18,037 inlined from ‘std::vector > > CASM::xtal::allowed_molecule_unique_names(const BasicStructure&)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/BasicStructure.cc:458:31: 2023-09-26T22:27:18,038 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:27:18,039 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-26T22:27:18,040 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:27:22,660 [9/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/StrainConverter.cc.o 2023-09-26T22:27:26,221 [10/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/CanonicalForm.cc.o 2023-09-26T22:27:44,199 [11/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/SimpleStructure.cc.o 2023-09-26T22:27:46,396 [12/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/HermiteCounter.cc.o 2023-09-26T22:27:59,768 [13/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/DoFSet.cc.o 2023-09-26T22:28:18,874 [14/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/Site.cc.o 2023-09-26T22:28:18,875 In file included from /usr/include/c++/12/vector:70, 2023-09-26T22:28:18,876 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/Site.hh:6, 2023-09-26T22:28:18,877 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/Site.cc:1: 2023-09-26T22:28:18,878 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double, double, double, std::__cxx11::basic_string, std::allocator >&}; _Tp = CASM::xtal::AtomPosition; _Alloc = std::allocator]’: 2023-09-26T22:28:18,879 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-26T22:28:18,880 439 | vector<_Tp, _Alloc>:: 2023-09-26T22:28:18,881 | ^~~~~~~~~~~~~~~~~~~ 2023-09-26T22:28:18,882 In file included from /usr/include/c++/12/vector:63: 2023-09-26T22:28:18,883 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*]’: 2023-09-26T22:28:18,884 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:28:18,885 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-26T22:28:18,886 | ^~~~~~~~~~~~~~~~ 2023-09-26T22:28:18,887 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:28:18,888 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*; bool _TrivialValueTypes = false]’, 2023-09-26T22:28:18,890 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-26T22:28:18,891 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*; _Tp = CASM::xtal::AtomPosition]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-26T22:28:18,892 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = CASM::xtal::AtomPosition; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-26T22:28:18,893 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = CASM::xtal::AtomPosition; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-26T22:28:18,894 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:28:18,895 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-26T22:28:18,896 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:28:18,897 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*; bool _TrivialValueTypes = false]’, 2023-09-26T22:28:18,898 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-26T22:28:18,900 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*; _Tp = CASM::xtal::AtomPosition]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-26T22:28:18,901 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = CASM::xtal::AtomPosition; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-26T22:28:18,902 inlined from ‘CASM::xtal::Molecule::Molecule(const CASM::xtal::Molecule&)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/Molecule.hh:80:7, 2023-09-26T22:28:18,903 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = CASM::xtal::Molecule; _Args = {const CASM::xtal::Molecule&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-26T22:28:18,904 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::Molecule*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21: 2023-09-26T22:28:18,908 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:28:18,909 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-26T22:28:18,910 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:28:18,911 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*; bool _TrivialValueTypes = false]’, 2023-09-26T22:28:18,912 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-26T22:28:18,913 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*; _Tp = CASM::xtal::AtomPosition]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-26T22:28:18,914 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = CASM::xtal::AtomPosition; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-26T22:28:18,915 inlined from ‘CASM::xtal::Molecule::Molecule(const CASM::xtal::Molecule&)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/Molecule.hh:80:7, 2023-09-26T22:28:18,916 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = CASM::xtal::Molecule; _Args = {CASM::xtal::Molecule&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-26T22:28:18,918 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = CASM::xtal::Molecule*; _ForwardIterator = CASM::xtal::Molecule*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21, 2023-09-26T22:28:18,919 inlined from ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = CASM::xtal::Molecule*; _ForwardIterator = CASM::xtal::Molecule*; bool _TrivialValueTypes = false]’ at /usr/include/c++/12/bits/stl_uninitialized.h:137:32, 2023-09-26T22:28:18,923 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = CASM::xtal::Molecule*; _ForwardIterator = CASM::xtal::Molecule*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-26T22:28:18,925 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = CASM::xtal::Molecule*; _ForwardIterator = CASM::xtal::Molecule*; _Tp = CASM::xtal::Molecule]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-26T22:28:18,926 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = CASM::xtal::Molecule; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:251:35: 2023-09-26T22:28:18,927 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:28:18,928 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-26T22:28:18,929 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:28:18,930 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const CASM::xtal::Site&}; _Tp = CASM::xtal::Site; _Alloc = std::allocator]’: 2023-09-26T22:28:18,930 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-26T22:28:18,931 439 | vector<_Tp, _Alloc>:: 2023-09-26T22:28:18,934 | ^~~~~~~~~~~~~~~~~~~ 2023-09-26T22:28:18,935 In file included from /usr/include/c++/12/vector:64: 2023-09-26T22:28:18,936 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = CASM::xtal::Site; _Alloc = std::allocator]’, 2023-09-26T22:28:18,937 inlined from ‘CASM::Index CASM::xtal::Site::_type_ID() const’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/Site.cc:425:33: 2023-09-26T22:28:18,938 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:28:18,939 1287 | _M_realloc_insert(end(), __x); 2023-09-26T22:28:18,940 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-26T22:28:18,941 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*; bool _TrivialValueTypes = false]’, 2023-09-26T22:28:18,942 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-26T22:28:18,943 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*; _Tp = CASM::xtal::AtomPosition]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-26T22:28:18,944 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = CASM::xtal::AtomPosition; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-26T22:28:18,953 inlined from ‘CASM::xtal::Molecule::Molecule(const CASM::xtal::Molecule&)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/Molecule.hh:80:7, 2023-09-26T22:28:18,954 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = CASM::xtal::Molecule; _Args = {const CASM::xtal::Molecule&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-26T22:28:18,955 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = const CASM::xtal::Molecule*; _ForwardIterator = CASM::xtal::Molecule*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21, 2023-09-26T22:28:18,956 inlined from ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = const CASM::xtal::Molecule*; _ForwardIterator = CASM::xtal::Molecule*; bool _TrivialValueTypes = false]’ at /usr/include/c++/12/bits/stl_uninitialized.h:137:32, 2023-09-26T22:28:18,958 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = const CASM::xtal::Molecule*; _ForwardIterator = CASM::xtal::Molecule*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-26T22:28:18,959 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = const CASM::xtal::Molecule*; _ForwardIterator = CASM::xtal::Molecule*; _Tp = CASM::xtal::Molecule]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-26T22:28:18,959 inlined from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = const CASM::xtal::Molecule*; _Tp = CASM::xtal::Molecule; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1690:33, 2023-09-26T22:28:18,960 inlined from ‘std::vector<_Tp, _Alloc>::vector(std::initializer_list<_Tp>, const allocator_type&) [with _Tp = CASM::xtal::Molecule; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:677:21, 2023-09-26T22:28:18,961 inlined from ‘CASM::xtal::Site::Site(const CASM::xtal::Coordinate&, const std::string&)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/Site.cc:44:27: 2023-09-26T22:28:18,962 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:28:18,963 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-26T22:28:18,964 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:28:23,027 [15/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/CoordinateSystems.cc.o 2023-09-26T22:28:35,512 [16/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/OccupantDoFIsEquivalent.cc.o 2023-09-26T22:28:35,513 In file included from /usr/include/c++/12/vector:63, 2023-09-26T22:28:35,514 from /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/libcasm/include/casm/container/Permutation.hh:9, 2023-09-26T22:28:35,515 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/OccupantDoFIsEquivalent.hh:4, 2023-09-26T22:28:35,516 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/OccupantDoFIsEquivalent.cc:1: 2023-09-26T22:28:35,516 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*]’: 2023-09-26T22:28:35,517 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:28:35,518 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-26T22:28:35,519 | ^~~~~~~~~~~~~~~~ 2023-09-26T22:28:35,521 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:28:35,521 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*; bool _TrivialValueTypes = false]’, 2023-09-26T22:28:35,522 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-26T22:28:35,523 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*; _Tp = CASM::xtal::AtomPosition]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-26T22:28:35,524 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = CASM::xtal::AtomPosition; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-26T22:28:35,525 inlined from ‘CASM::xtal::Molecule::Molecule(const CASM::xtal::Molecule&)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/Molecule.hh:80:7, 2023-09-26T22:28:35,526 inlined from ‘bool CASM::xtal::OccupantDoFIsEquivalent::operator()(const CASM::xtal::SymOp&, const std::vector&) const’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/OccupantDoFIsEquivalent.cc:60:57: 2023-09-26T22:28:35,527 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:28:35,528 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-26T22:28:35,529 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:28:35,530 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*; bool _TrivialValueTypes = false]’, 2023-09-26T22:28:35,531 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-26T22:28:35,532 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*; _Tp = CASM::xtal::AtomPosition]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-26T22:28:35,533 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = CASM::xtal::AtomPosition; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-26T22:28:35,534 inlined from ‘CASM::xtal::Molecule::Molecule(const CASM::xtal::Molecule&)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/Molecule.hh:80:7, 2023-09-26T22:28:35,535 inlined from ‘bool CASM::xtal::OccupantDoFIsEquivalent::operator()(const CASM::xtal::SymOp&) const’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/OccupantDoFIsEquivalent.cc:37:57: 2023-09-26T22:28:35,536 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:28:35,537 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-26T22:28:35,553 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:28:38,967 [17/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/SymTypeComparator.cc.o 2023-09-26T22:28:40,292 [18/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/SimpleStrucMapCalculator.cc.o 2023-09-26T22:28:40,293 In file included from /usr/include/c++/12/vector:70, 2023-09-26T22:28:40,294 from /usr/include/c++/12/functional:62, 2023-09-26T22:28:40,295 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/SymType.hh:5, 2023-09-26T22:28:40,296 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/Adapter.hh:4, 2023-09-26T22:28:40,297 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/SimpleStrucMapCalculator.hh:4, 2023-09-26T22:28:40,298 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/SimpleStrucMapCalculator.cc:1: 2023-09-26T22:28:40,298 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Eigen::Matrix&}; _Tp = Eigen::Matrix; _Alloc = std::allocator >]’: 2023-09-26T22:28:40,299 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2023-09-26T22:28:40,300 439 | vector<_Tp, _Alloc>:: 2023-09-26T22:28:40,301 | ^~~~~~~~~~~~~~~~~~~ 2023-09-26T22:28:40,302 In file included from /usr/include/c++/12/vector:64: 2023-09-26T22:28:40,303 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Eigen::Matrix; _Alloc = std::allocator >]’, 2023-09-26T22:28:40,304 inlined from ‘virtual std::vector > CASM::xtal::SimpleStrucMapCalculator::translations(const CASM::xtal::MappingNode&, const CASM::xtal::SimpleStructure&) const’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/SimpleStrucMapCalculator.cc:96:25: 2023-09-26T22:28:40,305 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2023-09-26T22:28:40,306 1287 | _M_realloc_insert(end(), __x); 2023-09-26T22:28:40,307 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-26T22:28:40,308 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const CASM::xtal::SymOp&}; _Tp = CASM::xtal::SymOp; _Alloc = std::allocator]’: 2023-09-26T22:28:40,309 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-26T22:28:40,310 439 | vector<_Tp, _Alloc>:: 2023-09-26T22:28:40,311 | ^~~~~~~~~~~~~~~~~~~ 2023-09-26T22:28:40,312 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {CASM::xtal::SymOp}; _Tp = CASM::xtal::SymOp; _Alloc = std::allocator]’: 2023-09-26T22:28:40,313 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-26T22:28:40,313 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {CASM::xtal::SymOp}; _Tp = CASM::xtal::SymOp; _Alloc = std::allocator]’, 2023-09-26T22:28:40,314 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = CASM::xtal::SymOp; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-26T22:28:40,315 inlined from ‘void CASM::xtal::StrucMapCalculatorInterface::_set_sym_info(const CASM::xtal::SymOpVector&)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/StrucMapCalculatorInterface.hh:190:28, 2023-09-26T22:28:40,316 inlined from ‘CASM::xtal::StrucMapCalculatorInterface::StrucMapCalculatorInterface(CASM::xtal::SimpleStructure, const CASM::xtal::SymOpVector&, CASM::xtal::SimpleStructure::SpeciesMode, CASM::xtal::StrucMapping::AllowedSpecies)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/StrucMapCalculatorInterface.hh:44:24, 2023-09-26T22:28:40,317 inlined from ‘CASM::xtal::SimpleStrucMapCalculator::SimpleStrucMapCalculator(CASM::xtal::SimpleStructure, const CASM::xtal::SymOpVector&, CASM::xtal::SimpleStructure::SpeciesMode, CASM::xtal::StrucMapping::AllowedSpecies)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/SimpleStrucMapCalculator.hh:27:77, 2023-09-26T22:28:40,318 inlined from ‘virtual CASM::xtal::StrucMapCalculatorInterface* CASM::xtal::SimpleStrucMapCalculator::_quasi_clone(CASM::xtal::SimpleStructure, const CASM::xtal::SymOpVector&, CASM::xtal::SimpleStructure::SpeciesMode, CASM::xtal::StrucMapping::AllowedSpecies) const’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/SimpleStrucMapCalculator.hh:82:68: 2023-09-26T22:28:40,319 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:28:40,319 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-26T22:28:40,320 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:28:40,321 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Eigen::Matrix; _Alloc = std::allocator >]’, 2023-09-26T22:28:40,322 inlined from ‘void CASM::xtal::StrucMapCalculatorInterface::_set_sym_info(const CASM::xtal::SymOpVector&)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/StrucMapCalculatorInterface.hh:194:42, 2023-09-26T22:28:40,323 inlined from ‘CASM::xtal::StrucMapCalculatorInterface::StrucMapCalculatorInterface(CASM::xtal::SimpleStructure, const CASM::xtal::SymOpVector&, CASM::xtal::SimpleStructure::SpeciesMode, CASM::xtal::StrucMapping::AllowedSpecies)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/StrucMapCalculatorInterface.hh:44:24, 2023-09-26T22:28:40,324 inlined from ‘CASM::xtal::SimpleStrucMapCalculator::SimpleStrucMapCalculator(CASM::xtal::SimpleStructure, const CASM::xtal::SymOpVector&, CASM::xtal::SimpleStructure::SpeciesMode, CASM::xtal::StrucMapping::AllowedSpecies)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/SimpleStrucMapCalculator.hh:27:77, 2023-09-26T22:28:40,325 inlined from ‘virtual CASM::xtal::StrucMapCalculatorInterface* CASM::xtal::SimpleStrucMapCalculator::_quasi_clone(CASM::xtal::SimpleStructure, const CASM::xtal::SymOpVector&, CASM::xtal::SimpleStructure::SpeciesMode, CASM::xtal::StrucMapping::AllowedSpecies) const’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/SimpleStrucMapCalculator.hh:82:68: 2023-09-26T22:28:40,326 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2023-09-26T22:28:40,327 1287 | _M_realloc_insert(end(), __x); 2023-09-26T22:28:40,328 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-26T22:28:40,329 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = CASM::xtal::SymOp; _Alloc = std::allocator]’, 2023-09-26T22:28:40,330 inlined from ‘void CASM::xtal::StrucMapCalculatorInterface::_set_sym_info(const CASM::xtal::SymOpVector&)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/StrucMapCalculatorInterface.hh:199:32, 2023-09-26T22:28:40,331 inlined from ‘CASM::xtal::StrucMapCalculatorInterface::StrucMapCalculatorInterface(CASM::xtal::SimpleStructure, const CASM::xtal::SymOpVector&, CASM::xtal::SimpleStructure::SpeciesMode, CASM::xtal::StrucMapping::AllowedSpecies)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/StrucMapCalculatorInterface.hh:44:24, 2023-09-26T22:28:40,343 inlined from ‘CASM::xtal::SimpleStrucMapCalculator::SimpleStrucMapCalculator(CASM::xtal::SimpleStructure, const CASM::xtal::SymOpVector&, CASM::xtal::SimpleStructure::SpeciesMode, CASM::xtal::StrucMapping::AllowedSpecies)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/SimpleStrucMapCalculator.hh:27:77, 2023-09-26T22:28:40,344 inlined from ‘virtual CASM::xtal::StrucMapCalculatorInterface* CASM::xtal::SimpleStrucMapCalculator::_quasi_clone(CASM::xtal::SimpleStructure, const CASM::xtal::SymOpVector&, CASM::xtal::SimpleStructure::SpeciesMode, CASM::xtal::StrucMapping::AllowedSpecies) const’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/SimpleStrucMapCalculator.hh:82:68: 2023-09-26T22:28:40,345 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:28:40,346 1287 | _M_realloc_insert(end(), __x); 2023-09-26T22:28:40,347 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-26T22:28:47,272 [19/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/SymInfo.cc.o 2023-09-26T22:28:56,101 [20/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/SymType.cc.o 2023-09-26T22:28:58,043 [21/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/UnitCellCoordTraits.cc.o 2023-09-26T22:29:03,775 [22/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/SpeciesProperty.cc.o 2023-09-26T22:29:07,735 [23/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/Coordinate.cc.o 2023-09-26T22:29:21,588 [24/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/Niggli.cc.o 2023-09-26T22:29:37,464 [25/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/Lattice.cc.o 2023-09-26T22:29:37,465 In file included from /usr/include/c++/12/vector:70, 2023-09-26T22:29:37,466 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/Lattice.hh:7, 2023-09-26T22:29:37,467 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/Lattice.cc:1: 2023-09-26T22:29:37,468 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2023-09-26T22:29:37,469 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-26T22:29:37,469 439 | vector<_Tp, _Alloc>:: 2023-09-26T22:29:37,470 | ^~~~~~~~~~~~~~~~~~~ 2023-09-26T22:29:37,471 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, 2023-09-26T22:29:37,472 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-26T22:29:37,473 inlined from ‘std::vector CASM::xtal::Lattice::calc_kpoints(std::vector, CASM::xtal::Lattice)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/Lattice.cc:182:35: 2023-09-26T22:29:37,474 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:29:37,475 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-26T22:29:37,476 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:29:40,891 [26/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/SuperlatticeEnumerator.cc.o 2023-09-26T22:29:43,840 [27/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/SymTools.cc.o 2023-09-26T22:29:43,841 In file included from /usr/include/c++/12/vector:70, 2023-09-26T22:29:43,842 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/SymTools.hh:4, 2023-09-26T22:29:43,843 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/SymTools.cc:1: 2023-09-26T22:29:43,845 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {CASM::xtal::SymOp}; _Tp = CASM::xtal::SymOp; _Alloc = std::allocator]’: 2023-09-26T22:29:43,846 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-26T22:29:43,847 439 | vector<_Tp, _Alloc>:: 2023-09-26T22:29:43,848 | ^~~~~~~~~~~~~~~~~~~ 2023-09-26T22:29:43,849 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {CASM::xtal::SymOp}; _Tp = CASM::xtal::SymOp; _Alloc = std::allocator]’, 2023-09-26T22:29:43,850 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = CASM::xtal::SymOp; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-26T22:29:43,851 inlined from ‘std::vector CASM::xtal::make_point_group(const Lattice&, double)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/SymTools.cc:162:21: 2023-09-26T22:29:43,852 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:29:43,853 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-26T22:29:43,854 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:29:45,670 [28/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/version.cc.o 2023-09-26T22:30:02,620 [29/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/LatticeIsEquivalent.cc.o 2023-09-26T22:30:03,388 [30/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/UnitCellCoordRep.cc.o 2023-09-26T22:30:09,786 [31/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/StrucMapping.cc.o 2023-09-26T22:30:09,787 In file included from /usr/include/c++/12/vector:70, 2023-09-26T22:30:09,788 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/StrucMapping.hh:5, 2023-09-26T22:30:09,789 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/StrucMapping.cc:1: 2023-09-26T22:30:09,790 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const CASM::xtal::SymOp&}; _Tp = CASM::xtal::SymOp; _Alloc = std::allocator]’: 2023-09-26T22:30:09,791 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-26T22:30:09,791 439 | vector<_Tp, _Alloc>:: 2023-09-26T22:30:09,792 | ^~~~~~~~~~~~~~~~~~~ 2023-09-26T22:30:09,793 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const CASM::xtal::Lattice&}; _Tp = CASM::xtal::Lattice; _Alloc = std::allocator]’: 2023-09-26T22:30:09,794 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-26T22:30:09,796 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {CASM::xtal::SymOp}; _Tp = CASM::xtal::SymOp; _Alloc = std::allocator]’: 2023-09-26T22:30:09,797 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-26T22:30:09,798 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {CASM::xtal::SymOp}; _Tp = CASM::xtal::SymOp; _Alloc = std::allocator]’, 2023-09-26T22:30:09,799 inlined from ‘CASM::xtal::SymOpVector CASM::adapter::Adapter, FromType>::operator()(FromTypeIt, FromTypeIt) [with FromTypeIt = __gnu_cxx::__normal_iterator >; FromType = __gnu_cxx::__normal_iterator >]’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/Adapter.hh:36:32, 2023-09-26T22:30:09,800 inlined from ‘CASM::xtal::SuperlatticeEnumerator::SuperlatticeEnumerator(ExternSymGroupTypeIt, ExternSymGroupTypeIt, const CASM::xtal::Lattice&, const CASM::xtal::ScelEnumProps&) [with ExternSymGroupTypeIt = __gnu_cxx::__normal_iterator >]’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/SuperlatticeEnumerator.hh:256:23, 2023-09-26T22:30:09,801 inlined from ‘std::vector CASM::xtal::StrucMapper::_lattices_of_vol(CASM::Index) const’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/StrucMapping.cc:712:44: 2023-09-26T22:30:09,802 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:30:09,803 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-26T22:30:09,804 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:30:09,805 In file included from /usr/include/c++/12/vector:64: 2023-09-26T22:30:09,806 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = CASM::xtal::Lattice; _Alloc = std::allocator]’, 2023-09-26T22:30:09,806 inlined from ‘std::vector CASM::xtal::StrucMapper::_lattices_of_vol(CASM::Index) const’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/StrucMapping.cc:719:22: 2023-09-26T22:30:09,807 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:30:09,808 1287 | _M_realloc_insert(end(), __x); 2023-09-26T22:30:09,809 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-26T22:30:09,810 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = CASM::xtal::SymOp; _Alloc = std::allocator]’, 2023-09-26T22:30:09,811 inlined from ‘std::set CASM::xtal::StrucMapper::_seed_k_best_from_super_lats(const CASM::xtal::SimpleStructure&, const std::vector&, const std::vector&, CASM::Index, double, double, const CASM::xtal::SymOpVector&) const’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/StrucMapping.cc:871:35: 2023-09-26T22:30:09,812 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:30:09,813 1287 | _M_realloc_insert(end(), __x); 2023-09-26T22:30:09,814 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-26T22:30:09,815 In file included from /usr/include/c++/12/map:60, 2023-09-26T22:30:09,816 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/SimpleStructure.hh:4, 2023-09-26T22:30:09,818 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/StrucMapping.hh:7: 2023-09-26T22:30:09,818 /usr/include/c++/12/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(const_iterator, const key_type&) [with _Key = CASM::xtal::MappingNode; _Val = CASM::xtal::MappingNode; _KeyOfValue = std::_Identity; _Compare = std::less; _Alloc = std::allocator]’: 2023-09-26T22:30:09,819 /usr/include/c++/12/bits/stl_tree.h:2209:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::less, std::allocator >::const_iterator’ changed in GCC 7.1 2023-09-26T22:30:09,820 2209 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2023-09-26T22:30:09,821 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:30:09,823 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = CASM::xtal::Lattice; _Alloc = std::allocator]’, 2023-09-26T22:30:09,824 inlined from ‘std::set CASM::xtal::StrucMapper::_seed_from_vol_range(const CASM::xtal::SimpleStructure&, CASM::Index, CASM::Index, CASM::Index, double, double, const CASM::xtal::SymOpVector&) const’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/StrucMapping.cc:545:24: 2023-09-26T22:30:09,825 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:30:09,826 1287 | _M_realloc_insert(end(), __x); 2023-09-26T22:30:09,833 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-26T22:30:15,235 [32/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/BasicStructureTools.cc.o 2023-09-26T22:30:15,236 In file included from /usr/include/c++/12/vector:70, 2023-09-26T22:30:15,237 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/BasicStructureTools.hh:5, 2023-09-26T22:30:15,237 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/BasicStructureTools.cc:1: 2023-09-26T22:30:15,238 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {CASM::xtal::SymOp}; _Tp = CASM::xtal::SymOp; _Alloc = std::allocator]’: 2023-09-26T22:30:15,239 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-26T22:30:15,240 439 | vector<_Tp, _Alloc>:: 2023-09-26T22:30:15,241 | ^~~~~~~~~~~~~~~~~~~ 2023-09-26T22:30:15,242 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const CASM::xtal::SymOp&}; _Tp = CASM::xtal::SymOp; _Alloc = std::allocator]’: 2023-09-26T22:30:15,243 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-26T22:30:15,244 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {CASM::xtal::SymOp}; _Tp = CASM::xtal::SymOp; _Alloc = std::allocator]’, 2023-09-26T22:30:15,245 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = CASM::xtal::SymOp; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-26T22:30:15,246 inlined from ‘std::vector CASM::xtal::make_crystal_point_group(const std::vector&, double)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/BasicStructureTools.cc:512:24: 2023-09-26T22:30:15,247 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:30:15,248 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-26T22:30:15,249 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:30:15,250 In file included from /usr/include/c++/12/vector:64: 2023-09-26T22:30:15,251 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = CASM::xtal::SymOp; _Alloc = std::allocator]’, 2023-09-26T22:30:15,252 inlined from ‘std::vector CASM::xtal::make_crystal_point_group(const std::vector&, double)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/BasicStructureTools.cc:516:28: 2023-09-26T22:30:15,253 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:30:15,254 1287 | _M_realloc_insert(end(), __x); 2023-09-26T22:30:15,255 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-26T22:30:15,256 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = CASM::xtal::SymOp; _Alloc = std::allocator]’, 2023-09-26T22:30:15,257 inlined from ‘void CASM::xtal::close_group(SymOpVector*, const SymOpCompareType&) [with SymOpCompareType = SymOpPeriodicCompare_f]’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/SymType.hh:120:35: 2023-09-26T22:30:15,258 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:30:15,259 1287 | _M_realloc_insert(end(), __x); 2023-09-26T22:30:15,260 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-26T22:30:15,261 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Eigen::Matrix&}; _Tp = Eigen::Matrix; _Alloc = std::allocator >]’: 2023-09-26T22:30:15,262 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2023-09-26T22:30:15,263 439 | vector<_Tp, _Alloc>:: 2023-09-26T22:30:15,264 | ^~~~~~~~~~~~~~~~~~~ 2023-09-26T22:30:15,265 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Eigen::Matrix; _Alloc = std::allocator >]’, 2023-09-26T22:30:15,267 inlined from ‘std::vector > CASM::xtal::make_internal_translations(const std::vector&, double)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/BasicStructureTools.cc:537:38: 2023-09-26T22:30:15,268 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2023-09-26T22:30:15,269 1287 | _M_realloc_insert(end(), __x); 2023-09-26T22:30:15,270 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-26T22:30:15,272 In file included from /usr/include/c++/12/set:60, 2023-09-26T22:30:15,273 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/BasicStructureTools.hh:4: 2023-09-26T22:30:15,274 /usr/include/c++/12/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {Eigen::Matrix, const CASM::xtal::SymOp&}; _Key = Eigen::Matrix; _Val = std::pair, CASM::xtal::SymOp>; _KeyOfValue = std::_Select1st, CASM::xtal::SymOp> >; _Compare = CASM::xtal::SymOpSortKeyCompare; _Alloc = std::allocator, CASM::xtal::SymOp> >]’: 2023-09-26T22:30:15,275 /usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, CASM::xtal::SymOp>, std::_Select1st, CASM::xtal::SymOp> >, CASM::xtal::SymOpSortKeyCompare, std::allocator, CASM::xtal::SymOp> > >::const_iterator’ changed in GCC 7.1 2023-09-26T22:30:15,276 2457 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2023-09-26T22:30:15,278 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:30:15,283 In file included from /usr/include/c++/12/map:61, 2023-09-26T22:30:15,285 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/DoFSet.hh:4, 2023-09-26T22:30:15,286 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/BasicStructure.hh:13, 2023-09-26T22:30:15,287 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/BasicStructureTools.cc:10: 2023-09-26T22:30:15,288 In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::iterator std::map<_Key, _Tp, _Compare, _Alloc>::emplace_hint(const_iterator, _Args&& ...) [with _Args = {Eigen::Matrix, const CASM::xtal::SymOp&}; _Key = Eigen::Matrix; _Tp = CASM::xtal::SymOp; _Compare = CASM::xtal::SymOpSortKeyCompare; _Alloc = std::allocator, CASM::xtal::SymOp> >]’, 2023-09-26T22:30:15,289 inlined from ‘std::pair, std::_Select1st >, _Compare, typename __gnu_cxx::__alloc_traits<_Allocator>::rebind >::other>::iterator, bool> std::map<_Key, _Tp, _Compare, _Alloc>::emplace(_Args&& ...) [with _Args = {Eigen::Matrix, const CASM::xtal::SymOp&}; _Key = Eigen::Matrix; _Tp = CASM::xtal::SymOp; _Compare = CASM::xtal::SymOpSortKeyCompare; _Alloc = std::allocator, CASM::xtal::SymOp> >]’ at /usr/include/c++/12/bits/stl_map.h:599:22, 2023-09-26T22:30:15,290 inlined from ‘void CASM::xtal::sort_factor_group(std::vector&, const Lattice&)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/BasicStructureTools.cc:427:19: 2023-09-26T22:30:15,292 /usr/include/c++/12/bits/stl_map.h:638:45: note: parameter passing for argument of type ‘std::map, CASM::xtal::SymOp, CASM::xtal::SymOpSortKeyCompare>::const_iterator’ {aka ‘std::_Rb_tree, std::pair, CASM::xtal::SymOp>, std::_Select1st, CASM::xtal::SymOp> >, CASM::xtal::SymOpSortKeyCompare, std::allocator, CASM::xtal::SymOp> > >::const_iterator’} changed in GCC 7.1 2023-09-26T22:30:15,293 638 | return _M_t._M_emplace_hint_unique(__pos, 2023-09-26T22:30:15,294 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ 2023-09-26T22:30:15,296 639 | std::forward<_Args>(__args)...); 2023-09-26T22:30:15,297 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:30:15,298 In file included from /usr/include/c++/12/vector:63: 2023-09-26T22:30:15,299 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*]’: 2023-09-26T22:30:15,301 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:30:15,302 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-26T22:30:15,304 | ^~~~~~~~~~~~~~~~ 2023-09-26T22:30:15,305 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:30:15,307 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*; bool _TrivialValueTypes = false]’, 2023-09-26T22:30:15,309 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-26T22:30:15,310 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::AtomPosition*; _Tp = CASM::xtal::AtomPosition]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-26T22:30:15,312 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = CASM::xtal::AtomPosition; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-26T22:30:15,313 inlined from ‘CASM::xtal::Molecule::Molecule(const CASM::xtal::Molecule&)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/Molecule.hh:80:7, 2023-09-26T22:30:15,314 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = CASM::xtal::Molecule; _Args = {const CASM::xtal::Molecule&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-26T22:30:15,316 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = CASM::xtal::Molecule*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21: 2023-09-26T22:30:15,317 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:30:15,319 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-26T22:30:15,326 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:30:15,328 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {CASM::xtal::Site}; _Tp = CASM::xtal::Site; _Alloc = std::allocator]’: 2023-09-26T22:30:15,329 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-26T22:30:15,330 439 | vector<_Tp, _Alloc>:: 2023-09-26T22:30:15,332 | ^~~~~~~~~~~~~~~~~~~ 2023-09-26T22:30:15,333 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {CASM::xtal::Site}; _Tp = CASM::xtal::Site; _Alloc = std::allocator]’, 2023-09-26T22:30:15,334 inlined from ‘CASM::xtal::BasicStructure CASM::xtal::make_superstructure(const BasicStructure&, const Eigen::Matrix&) [with IntegralType = int; int Options = 0]’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/BasicStructureTools.cc:711:36: 2023-09-26T22:30:15,335 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:30:15,337 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-26T22:30:15,338 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:30:15,339 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {CASM::xtal::Site}; _Tp = CASM::xtal::Site; _Alloc = std::allocator]’, 2023-09-26T22:30:15,341 inlined from ‘CASM::xtal::BasicStructure CASM::xtal::make_superstructure(const BasicStructure&, const Eigen::Matrix&) [with IntegralType = long int; int Options = 0]’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/BasicStructureTools.cc:711:36: 2023-09-26T22:30:15,342 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:30:15,343 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-26T22:30:15,344 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:30:15,346 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {CASM::xtal::Site}; _Tp = CASM::xtal::Site; _Alloc = std::allocator]’, 2023-09-26T22:30:15,347 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = CASM::xtal::Site; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-26T22:30:15,348 inlined from ‘CASM::xtal::BasicStructure CASM::xtal::symmetrize(const BasicStructure&, const std::vector&)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/BasicStructureTools.cc:667:31: 2023-09-26T22:30:15,349 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:30:15,350 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-26T22:30:15,352 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:30:15,353 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {CASM::xtal::Site}; _Tp = CASM::xtal::Site; _Alloc = std::allocator]’, 2023-09-26T22:30:15,354 inlined from ‘CASM::xtal::SymOpVector {anonymous}::make_factor_group_from_point_group(const CASM::xtal::BasicStructure&, const CASM::xtal::SymOpVector&, bool, double)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/BasicStructureTools.cc:128:37: 2023-09-26T22:30:15,356 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:30:15,357 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-26T22:30:15,358 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:30:15,359 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = CASM::xtal::SymOp; _Alloc = std::allocator]’, 2023-09-26T22:30:15,361 inlined from ‘CASM::xtal::SymOpVector {anonymous}::make_factor_group_from_point_group(const CASM::xtal::BasicStructure&, const CASM::xtal::SymOpVector&, bool, double)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/BasicStructureTools.cc:178:31: 2023-09-26T22:30:15,362 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:30:15,363 1287 | _M_realloc_insert(end(), __x); 2023-09-26T22:30:15,364 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-26T22:30:15,365 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Eigen::Matrix; _Alloc = std::allocator >]’, 2023-09-26T22:30:15,366 inlined from ‘CASM::xtal::BasicStructure CASM::xtal::make_primitive(const BasicStructure&, double)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/BasicStructureTools.cc:266:39: 2023-09-26T22:30:15,373 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2023-09-26T22:30:15,374 1287 | _M_realloc_insert(end(), __x); 2023-09-26T22:30:15,375 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-26T22:30:15,376 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {CASM::xtal::Site}; _Tp = CASM::xtal::Site; _Alloc = std::allocator]’, 2023-09-26T22:30:15,377 inlined from ‘CASM::xtal::BasicStructure CASM::xtal::make_primitive(const BasicStructure&, double)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/BasicStructureTools.cc:308:47: 2023-09-26T22:30:15,378 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:30:15,379 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-26T22:30:15,380 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:30:15,381 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {CASM::xtal::SymOp}; _Tp = CASM::xtal::SymOp; _Alloc = std::allocator]’, 2023-09-26T22:30:15,382 inlined from ‘void {anonymous}::expand_with_time_reversal(CASM::xtal::SymOpVector*)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/BasicStructureTools.cc:59:38, 2023-09-26T22:30:15,383 inlined from ‘std::pair > {anonymous}::make_primitive_factor_group(const CASM::xtal::BasicStructure&, double)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/BasicStructureTools.cc:216:32, 2023-09-26T22:30:15,384 inlined from ‘std::vector CASM::xtal::make_factor_group(const BasicStructure&, double)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/BasicStructureTools.cc:467:73: 2023-09-26T22:30:15,386 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:30:15,387 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-26T22:30:15,388 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:30:15,389 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {CASM::xtal::SymOp}; _Tp = CASM::xtal::SymOp; _Alloc = std::allocator]’, 2023-09-26T22:30:15,390 inlined from ‘std::vector CASM::xtal::make_factor_group(const BasicStructure&, double)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/BasicStructureTools.cc:494:32: 2023-09-26T22:30:15,391 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:30:15,392 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-26T22:30:15,393 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:30:16,301 [33/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/Molecule.cc.o 2023-09-26T22:30:16,302 In file included from /usr/include/c++/12/vector:70, 2023-09-26T22:30:16,303 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/Molecule.hh:7, 2023-09-26T22:30:16,304 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/Molecule.cc:1: 2023-09-26T22:30:16,305 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {CASM::xtal::AtomPosition}; _Tp = CASM::xtal::AtomPosition; _Alloc = std::allocator]’: 2023-09-26T22:30:16,305 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-26T22:30:16,306 439 | vector<_Tp, _Alloc>:: 2023-09-26T22:30:16,307 | ^~~~~~~~~~~~~~~~~~~ 2023-09-26T22:30:16,308 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {CASM::xtal::AtomPosition}; _Tp = CASM::xtal::AtomPosition; _Alloc = std::allocator]’, 2023-09-26T22:30:16,309 inlined from ‘CASM::xtal::Molecule& CASM::sym::apply(const CASM::xtal::SymOp&, CASM::xtal::Molecule&)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/Molecule.cc:153:35: 2023-09-26T22:30:16,309 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:30:16,310 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-26T22:30:16,311 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:30:31,352 [34/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/io/LatticeIO.cc.o 2023-09-26T22:30:31,353 In file included from /usr/include/c++/12/set:60, 2023-09-26T22:30:31,354 from /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/libcasm/include/casm/casm_io/container/json_io.hh:4, 2023-09-26T22:30:31,355 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/io/LatticeIO.cc:3: 2023-09-26T22:30:31,356 /usr/include/c++/12/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >, nlohmann::basic_json, std::allocator >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer, std::vector > >}; _Key = std::__cxx11::basic_string; _Val = std::pair, nlohmann::basic_json<> >; _KeyOfValue = std::_Select1st, nlohmann::basic_json<> > >; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’: 2023-09-26T22:30:31,357 /usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ changed in GCC 7.1 2023-09-26T22:30:31,359 2457 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2023-09-26T22:30:31,360 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:30:31,361 In file included from /usr/include/c++/12/map:61, 2023-09-26T22:30:31,362 from /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/libcasm/include/casm/external/nlohmann/json.hpp:72, 2023-09-26T22:30:31,363 from /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/libcasm/include/casm/casm_io/json/jsonParser.hh:10, 2023-09-26T22:30:31,364 from /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/libcasm/include/casm/casm_io/container/json_io.hh:7: 2023-09-26T22:30:31,365 In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::iterator std::map<_Key, _Tp, _Compare, _Alloc>::emplace_hint(const_iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >, nlohmann::basic_json, std::allocator >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer, std::vector > >}; _Key = std::__cxx11::basic_string; _Tp = nlohmann::basic_json<>; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’, 2023-09-26T22:30:31,366 inlined from ‘std::pair, std::_Select1st >, _Compare, typename __gnu_cxx::__alloc_traits<_Allocator>::rebind >::other>::iterator, bool> std::map<_Key, _Tp, _Compare, _Alloc>::emplace(_Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >, nlohmann::basic_json, std::allocator >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer, std::vector > >}; _Key = std::__cxx11::basic_string; _Tp = nlohmann::basic_json<>; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’ at /usr/include/c++/12/bits/stl_map.h:599:22, 2023-09-26T22:30:31,367 inlined from ‘nlohmann::basic_json::basic_json(initializer_list_t, bool, value_t) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer; BinaryType = std::vector]’ at /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/libcasm/include/casm/external/nlohmann/json.hpp:19199:40: 2023-09-26T22:30:31,368 /usr/include/c++/12/bits/stl_map.h:638:45: note: parameter passing for argument of type ‘std::map, nlohmann::basic_json<>, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ {aka ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’} changed in GCC 7.1 2023-09-26T22:30:31,369 638 | return _M_t._M_emplace_hint_unique(__pos, 2023-09-26T22:30:31,370 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ 2023-09-26T22:30:31,371 639 | std::forward<_Args>(__args)...); 2023-09-26T22:30:31,372 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:30:41,847 [35/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/io/SuperlatticeEnumeratorIO.cc.o 2023-09-26T22:30:41,847 In file included from /usr/include/c++/12/set:60, 2023-09-26T22:30:41,848 from /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/libcasm/include/casm/casm_io/container/json_io.hh:4, 2023-09-26T22:30:41,849 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/io/SuperlatticeEnumeratorIO.cc:3: 2023-09-26T22:30:41,850 /usr/include/c++/12/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >, nlohmann::basic_json, std::allocator >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer, std::vector > >}; _Key = std::__cxx11::basic_string; _Val = std::pair, nlohmann::basic_json<> >; _KeyOfValue = std::_Select1st, nlohmann::basic_json<> > >; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’: 2023-09-26T22:30:41,851 /usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ changed in GCC 7.1 2023-09-26T22:30:41,852 2457 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2023-09-26T22:30:41,853 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:30:41,854 In file included from /usr/include/c++/12/map:61, 2023-09-26T22:30:41,855 from /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/libcasm/include/casm/external/nlohmann/json.hpp:72, 2023-09-26T22:30:41,856 from /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/libcasm/include/casm/casm_io/json/jsonParser.hh:10, 2023-09-26T22:30:41,857 from /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/libcasm/include/casm/casm_io/container/json_io.hh:7: 2023-09-26T22:30:41,858 In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::iterator std::map<_Key, _Tp, _Compare, _Alloc>::emplace_hint(const_iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >, nlohmann::basic_json, std::allocator >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer, std::vector > >}; _Key = std::__cxx11::basic_string; _Tp = nlohmann::basic_json<>; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’, 2023-09-26T22:30:41,859 inlined from ‘std::pair, std::_Select1st >, _Compare, typename __gnu_cxx::__alloc_traits<_Allocator>::rebind >::other>::iterator, bool> std::map<_Key, _Tp, _Compare, _Alloc>::emplace(_Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >, nlohmann::basic_json, std::allocator >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer, std::vector > >}; _Key = std::__cxx11::basic_string; _Tp = nlohmann::basic_json<>; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’ at /usr/include/c++/12/bits/stl_map.h:599:22, 2023-09-26T22:30:41,860 inlined from ‘nlohmann::basic_json::basic_json(initializer_list_t, bool, value_t) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer; BinaryType = std::vector]’ at /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/libcasm/include/casm/external/nlohmann/json.hpp:19199:40: 2023-09-26T22:30:41,861 /usr/include/c++/12/bits/stl_map.h:638:45: note: parameter passing for argument of type ‘std::map, nlohmann::basic_json<>, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ {aka ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’} changed in GCC 7.1 2023-09-26T22:30:41,862 638 | return _M_t._M_emplace_hint_unique(__pos, 2023-09-26T22:30:41,863 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ 2023-09-26T22:30:41,864 639 | std::forward<_Args>(__args)...); 2023-09-26T22:30:41,865 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:30:54,191 [36/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/io/SimpleStructureIO.cc.o 2023-09-26T22:30:54,192 In file included from /usr/include/c++/12/set:60, 2023-09-26T22:30:54,193 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/io/SimpleStructureIO.hh:4, 2023-09-26T22:30:54,194 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/io/SimpleStructureIO.cc:1: 2023-09-26T22:30:54,195 /usr/include/c++/12/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >, nlohmann::basic_json, std::allocator >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer, std::vector > >}; _Key = std::__cxx11::basic_string; _Val = std::pair, nlohmann::basic_json<> >; _KeyOfValue = std::_Select1st, nlohmann::basic_json<> > >; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’: 2023-09-26T22:30:54,196 /usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ changed in GCC 7.1 2023-09-26T22:30:54,198 2457 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2023-09-26T22:30:54,198 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:30:54,199 In file included from /usr/include/c++/12/map:61, 2023-09-26T22:30:54,200 from /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/libcasm/include/casm/external/nlohmann/json.hpp:72, 2023-09-26T22:30:54,201 from /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/libcasm/include/casm/casm_io/json/jsonParser.hh:10, 2023-09-26T22:30:54,202 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/io/SimpleStructureIO.hh:6: 2023-09-26T22:30:54,214 In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::iterator std::map<_Key, _Tp, _Compare, _Alloc>::emplace_hint(const_iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >, nlohmann::basic_json, std::allocator >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer, std::vector > >}; _Key = std::__cxx11::basic_string; _Tp = nlohmann::basic_json<>; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’, 2023-09-26T22:30:54,215 inlined from ‘std::pair, std::_Select1st >, _Compare, typename __gnu_cxx::__alloc_traits<_Allocator>::rebind >::other>::iterator, bool> std::map<_Key, _Tp, _Compare, _Alloc>::emplace(_Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >, nlohmann::basic_json, std::allocator >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer, std::vector > >}; _Key = std::__cxx11::basic_string; _Tp = nlohmann::basic_json<>; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’ at /usr/include/c++/12/bits/stl_map.h:599:22, 2023-09-26T22:30:54,216 inlined from ‘nlohmann::basic_json::basic_json(initializer_list_t, bool, value_t) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer; BinaryType = std::vector]’ at /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/libcasm/include/casm/external/nlohmann/json.hpp:19199:40: 2023-09-26T22:30:54,217 /usr/include/c++/12/bits/stl_map.h:638:45: note: parameter passing for argument of type ‘std::map, nlohmann::basic_json<>, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ {aka ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’} changed in GCC 7.1 2023-09-26T22:30:54,219 638 | return _M_t._M_emplace_hint_unique(__pos, 2023-09-26T22:30:54,220 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ 2023-09-26T22:30:54,221 639 | std::forward<_Args>(__args)...); 2023-09-26T22:30:54,221 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:31:04,348 [37/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/io/SymInfo_stream_io.cc.o 2023-09-26T22:31:15,674 [38/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/io/SymInfo_json_io.cc.o 2023-09-26T22:31:15,675 In file included from /usr/include/c++/12/map:60, 2023-09-26T22:31:15,676 from /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/libcasm/include/casm/casm_io/enum/io_traits.hh:5, 2023-09-26T22:31:15,677 from /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/libcasm/include/casm/casm_io/enum/json_io.hh:4, 2023-09-26T22:31:15,678 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/io/SymInfo_json_io.hh:4, 2023-09-26T22:31:15,679 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/io/SymInfo_json_io.cc:1: 2023-09-26T22:31:15,680 /usr/include/c++/12/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >, nlohmann::basic_json, std::allocator >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer, std::vector > >}; _Key = std::__cxx11::basic_string; _Val = std::pair, nlohmann::basic_json<> >; _KeyOfValue = std::_Select1st, nlohmann::basic_json<> > >; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’: 2023-09-26T22:31:15,682 /usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ changed in GCC 7.1 2023-09-26T22:31:15,683 2457 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2023-09-26T22:31:15,684 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:31:15,685 In file included from /usr/include/c++/12/map:61: 2023-09-26T22:31:15,686 In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::iterator std::map<_Key, _Tp, _Compare, _Alloc>::emplace_hint(const_iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >, nlohmann::basic_json, std::allocator >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer, std::vector > >}; _Key = std::__cxx11::basic_string; _Tp = nlohmann::basic_json<>; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’, 2023-09-26T22:31:15,687 inlined from ‘std::pair, std::_Select1st >, _Compare, typename __gnu_cxx::__alloc_traits<_Alloc>::rebind >::other>::iterator, bool> std::map<_Key, _Tp, _Compare, _Alloc>::emplace(_Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >, nlohmann::basic_json, std::allocator >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer, std::vector > >}; _Key = std::__cxx11::basic_string; _Tp = nlohmann::basic_json<>; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’ at /usr/include/c++/12/bits/stl_map.h:599:22, 2023-09-26T22:31:15,688 inlined from ‘nlohmann::basic_json::basic_json(initializer_list_t, bool, value_t) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer; BinaryType = std::vector]’ at /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/libcasm/include/casm/external/nlohmann/json.hpp:19199:40: 2023-09-26T22:31:15,688 /usr/include/c++/12/bits/stl_map.h:638:45: note: parameter passing for argument of type ‘std::map, nlohmann::basic_json<>, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ {aka ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’} changed in GCC 7.1 2023-09-26T22:31:15,689 638 | return _M_t._M_emplace_hint_unique(__pos, 2023-09-26T22:31:15,690 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ 2023-09-26T22:31:15,691 639 | std::forward<_Args>(__args)...); 2023-09-26T22:31:15,692 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:31:16,093 [39/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/SimpleStructureTools.cc.o 2023-09-26T22:31:16,094 In file included from /usr/include/c++/12/vector:70, 2023-09-26T22:31:16,095 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/SimpleStructureTools.hh:7, 2023-09-26T22:31:16,096 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/SimpleStructureTools.cc:1: 2023-09-26T22:31:16,097 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double, double, double, std::__cxx11::basic_string, std::allocator >&}; _Tp = CASM::xtal::AtomPosition; _Alloc = std::allocator]’: 2023-09-26T22:31:16,098 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-26T22:31:16,099 439 | vector<_Tp, _Alloc>:: 2023-09-26T22:31:16,100 | ^~~~~~~~~~~~~~~~~~~ 2023-09-26T22:31:31,081 [40/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/io/UnitCellCoordIO.cc.o 2023-09-26T22:31:31,082 In file included from /usr/include/c++/12/map:60, 2023-09-26T22:31:31,083 from /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/libcasm/include/casm/external/nlohmann/json.hpp:72, 2023-09-26T22:31:31,083 from /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/libcasm/include/casm/casm_io/json/jsonParser.hh:10, 2023-09-26T22:31:31,084 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/io/UnitCellCoordIO.hh:4, 2023-09-26T22:31:31,085 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/io/UnitCellCoordIO.cc:1: 2023-09-26T22:31:31,086 /usr/include/c++/12/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >, nlohmann::basic_json, std::allocator >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer, std::vector > >}; _Key = std::__cxx11::basic_string; _Val = std::pair, nlohmann::basic_json<> >; _KeyOfValue = std::_Select1st, nlohmann::basic_json<> > >; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’: 2023-09-26T22:31:31,087 /usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ changed in GCC 7.1 2023-09-26T22:31:31,088 2457 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2023-09-26T22:31:31,089 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:31:31,090 In file included from /usr/include/c++/12/map:61: 2023-09-26T22:31:31,091 In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::iterator std::map<_Key, _Tp, _Compare, _Alloc>::emplace_hint(const_iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >, nlohmann::basic_json, std::allocator >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer, std::vector > >}; _Key = std::__cxx11::basic_string; _Tp = nlohmann::basic_json<>; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’, 2023-09-26T22:31:31,092 inlined from ‘std::pair, std::_Select1st >, _Compare, typename __gnu_cxx::__alloc_traits<_Allocator>::rebind >::other>::iterator, bool> std::map<_Key, _Tp, _Compare, _Alloc>::emplace(_Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >, nlohmann::basic_json, std::allocator >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer, std::vector > >}; _Key = std::__cxx11::basic_string; _Tp = nlohmann::basic_json<>; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’ at /usr/include/c++/12/bits/stl_map.h:599:22, 2023-09-26T22:31:31,093 inlined from ‘nlohmann::basic_json::basic_json(initializer_list_t, bool, value_t) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer; BinaryType = std::vector]’ at /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/libcasm/include/casm/external/nlohmann/json.hpp:19199:40: 2023-09-26T22:31:31,094 /usr/include/c++/12/bits/stl_map.h:638:45: note: parameter passing for argument of type ‘std::map, nlohmann::basic_json<>, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ {aka ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’} changed in GCC 7.1 2023-09-26T22:31:31,095 638 | return _M_t._M_emplace_hint_unique(__pos, 2023-09-26T22:31:31,096 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ 2023-09-26T22:31:31,097 639 | std::forward<_Args>(__args)...); 2023-09-26T22:31:31,098 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:31:31,271 [41/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/io/VaspIO.cc.o 2023-09-26T22:31:37,645 [42/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/io/BasicStructureIO.cc.o 2023-09-26T22:31:37,646 In file included from /usr/include/c++/12/vector:70, 2023-09-26T22:31:37,647 from /usr/include/c++/12/functional:62, 2023-09-26T22:31:37,648 from /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/libcasm/include/casm/external/Eigen/Core:85, 2023-09-26T22:31:37,649 from /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/libcasm/include/casm/external/Eigen/Dense:1, 2023-09-26T22:31:37,649 from /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/libcasm/include/casm/global/eigen.hh:4, 2023-09-26T22:31:37,650 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/io/BasicStructureIO.hh:9, 2023-09-26T22:31:37,651 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/io/BasicStructureIO.cc:1: 2023-09-26T22:31:37,652 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double, double, double, std::__cxx11::basic_string, std::allocator >&}; _Tp = CASM::xtal::AtomPosition; _Alloc = std::allocator]’: 2023-09-26T22:31:37,653 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-26T22:31:37,655 439 | vector<_Tp, _Alloc>:: 2023-09-26T22:31:37,655 | ^~~~~~~~~~~~~~~~~~~ 2023-09-26T22:31:37,656 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {CASM::xtal::AtomPosition}; _Tp = CASM::xtal::AtomPosition; _Alloc = std::allocator]’: 2023-09-26T22:31:37,657 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-26T22:31:37,657 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {CASM::xtal::AtomPosition}; _Tp = CASM::xtal::AtomPosition; _Alloc = std::allocator]’, 2023-09-26T22:31:37,658 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = CASM::xtal::AtomPosition; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-26T22:31:37,659 inlined from ‘void CASM::from_json(std::vector&, const jsonParser&, Args&& ...) [with T = xtal::AtomPosition; Args = {const Eigen::Ref, 0, Eigen::OuterStride<-1> >&, const ParsingDictionary&}]’ at /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/libcasm/include/casm/casm_io/container/json_io.hh:162:18: 2023-09-26T22:31:37,660 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:31:37,660 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-26T22:31:37,661 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:31:37,662 In file included from /usr/include/c++/12/map:60, 2023-09-26T22:31:37,663 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/io/BasicStructureIO.hh:5: 2023-09-26T22:31:37,664 /usr/include/c++/12/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >, nlohmann::basic_json, std::allocator >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer, std::vector > >}; _Key = std::__cxx11::basic_string; _Val = std::pair, nlohmann::basic_json<> >; _KeyOfValue = std::_Select1st, nlohmann::basic_json<> > >; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’: 2023-09-26T22:31:37,665 /usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ changed in GCC 7.1 2023-09-26T22:31:37,666 2457 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2023-09-26T22:31:37,667 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:31:37,667 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double, double, double, std::__cxx11::basic_string, std::allocator >&}; _Tp = CASM::xtal::AtomPosition; _Alloc = std::allocator]’, 2023-09-26T22:31:37,668 inlined from ‘CASM::xtal::Molecule::Molecule(const std::string&, std::vector, bool)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/Molecule.hh:218:44, 2023-09-26T22:31:37,668 inlined from ‘CASM::xtal::BasicStructure CASM::read_prim(const jsonParser&, double, const ParsingDictionary*)’ at /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/io/BasicStructureIO.cc:435:46: 2023-09-26T22:31:37,669 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-26T22:31:37,670 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-26T22:31:37,670 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:31:37,671 In file included from /usr/include/c++/12/map:61: 2023-09-26T22:31:37,672 In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::iterator std::map<_Key, _Tp, _Compare, _Alloc>::emplace_hint(const_iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >, nlohmann::basic_json, std::allocator >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer, std::vector > >}; _Key = std::__cxx11::basic_string; _Tp = nlohmann::basic_json<>; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’, 2023-09-26T22:31:37,672 inlined from ‘std::pair, std::_Select1st >, _Compare, typename __gnu_cxx::__alloc_traits<_Alloc>::rebind >::other>::iterator, bool> std::map<_Key, _Tp, _Compare, _Alloc>::emplace(_Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >, nlohmann::basic_json, std::allocator >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer, std::vector > >}; _Key = std::__cxx11::basic_string; _Tp = nlohmann::basic_json<>; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’ at /usr/include/c++/12/bits/stl_map.h:599:22, 2023-09-26T22:31:37,673 inlined from ‘nlohmann::basic_json::basic_json(initializer_list_t, bool, value_t) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer; BinaryType = std::vector]’ at /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/libcasm/include/casm/external/nlohmann/json.hpp:19199:40: 2023-09-26T22:31:37,674 /usr/include/c++/12/bits/stl_map.h:638:45: note: parameter passing for argument of type ‘std::map, nlohmann::basic_json<>, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ {aka ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’} changed in GCC 7.1 2023-09-26T22:31:37,675 638 | return _M_t._M_emplace_hint_unique(__pos, 2023-09-26T22:31:37,676 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ 2023-09-26T22:31:37,677 639 | std::forward<_Args>(__args)...); 2023-09-26T22:31:37,677 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:31:38,162 [43/47] Building CXX object CMakeFiles/casm_crystallography.dir/src/casm/crystallography/io/DoFSetIO.cc.o 2023-09-26T22:31:38,163 In file included from /usr/include/c++/12/map:60, 2023-09-26T22:31:38,164 from /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/libcasm/include/casm/external/nlohmann/json.hpp:72, 2023-09-26T22:31:38,164 from /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/libcasm/include/casm/casm_io/json/jsonParser.hh:10, 2023-09-26T22:31:38,165 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/include/casm/crystallography/io/DoFSetIO.hh:4, 2023-09-26T22:31:38,166 from /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/src/casm/crystallography/io/DoFSetIO.cc:1: 2023-09-26T22:31:38,166 /usr/include/c++/12/bits/stl_tree.h: In member function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >, nlohmann::basic_json, std::allocator >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer, std::vector > >}; _Key = std::__cxx11::basic_string; _Val = std::pair, nlohmann::basic_json<> >; _KeyOfValue = std::_Select1st, nlohmann::basic_json<> > >; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’: 2023-09-26T22:31:38,167 /usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ changed in GCC 7.1 2023-09-26T22:31:38,168 2457 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2023-09-26T22:31:38,168 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:31:38,169 In file included from /usr/include/c++/12/map:61: 2023-09-26T22:31:38,170 In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::iterator std::map<_Key, _Tp, _Compare, _Alloc>::emplace_hint(const_iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >, nlohmann::basic_json, std::allocator >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer, std::vector > >}; _Key = std::__cxx11::basic_string; _Tp = nlohmann::basic_json<>; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’, 2023-09-26T22:31:38,171 inlined from ‘std::pair, std::_Select1st >, _Compare, typename __gnu_cxx::__alloc_traits<_Allocator>::rebind >::other>::iterator, bool> std::map<_Key, _Tp, _Compare, _Alloc>::emplace(_Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >, nlohmann::basic_json, std::allocator >, bool, long long int, long long unsigned int, double, std::allocator, nlohmann::adl_serializer, std::vector > >}; _Key = std::__cxx11::basic_string; _Tp = nlohmann::basic_json<>; _Compare = std::less; _Alloc = std::allocator, nlohmann::basic_json<> > >]’ at /usr/include/c++/12/bits/stl_map.h:599:22, 2023-09-26T22:31:38,172 inlined from ‘nlohmann::basic_json::basic_json(initializer_list_t, bool, value_t) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long long int; NumberUnsignedType = long long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer; BinaryType = std::vector]’ at /tmp/pip-build-env-u66ilrb5/overlay/local/lib/python3.11/dist-packages/libcasm/include/casm/external/nlohmann/json.hpp:19199:40: 2023-09-26T22:31:38,172 /usr/include/c++/12/bits/stl_map.h:638:45: note: parameter passing for argument of type ‘std::map, nlohmann::basic_json<>, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’ {aka ‘std::_Rb_tree, std::pair, nlohmann::basic_json<> >, std::_Select1st, nlohmann::basic_json<> > >, std::less, std::allocator, nlohmann::basic_json<> > > >::const_iterator’} changed in GCC 7.1 2023-09-26T22:31:38,173 638 | return _M_t._M_emplace_hint_unique(__pos, 2023-09-26T22:31:38,174 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ 2023-09-26T22:31:38,174 639 | std::forward<_Args>(__args)...); 2023-09-26T22:31:38,175 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-26T22:31:38,717 [44/47] Linking CXX shared library libcasm_crystallography.so 2023-09-26T22:32:41,148 [45/47] Building CXX object CMakeFiles/_xtal.dir/python/src/xtal.cpp.o 2023-09-26T22:33:41,006 [46/47] Linking CXX shared module _xtal.cpython-311-arm-linux-gnueabihf.so 2023-09-26T22:33:41,006 lto-wrapper: warning: using serial compilation of 14 LTRANS jobs 2023-09-26T22:33:41,007 lto-wrapper: note: see the ‘-flto’ option documentation for more information 2023-09-26T22:33:41,007 [46/47] Install the project... 2023-09-26T22:33:41,024 -- Install configuration: "Release" 2023-09-26T22:33:41,028 -- Installing: /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/_skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/OccupantDoFIsEquivalent.hh 2023-09-26T22:33:41,030 -- Installing: /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/_skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/BasicStructureTools.hh 2023-09-26T22:33:41,033 -- Installing: /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/_skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/Lattice.hh 2023-09-26T22:33:41,036 -- Installing: 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/tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/_skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/io/BasicStructureIO.hh 2023-09-26T22:33:41,150 -- Installing: /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/_skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/io/UnitCellCoordIO.hh 2023-09-26T22:33:41,153 -- Installing: /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/_skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/io/VaspIO.hh 2023-09-26T22:33:41,155 -- Installing: /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/_skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/io/SymInfo_json_io.hh 2023-09-26T22:33:41,158 -- Installing: /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/_skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/io/jsonStruc.hh 2023-09-26T22:33:41,162 -- Installing: /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/_skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/lib/libcasm_crystallography.so 2023-09-26T22:33:41,193 -- Set runtime path of "/tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/_skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/lib/libcasm_crystallography.so" to "$ORIGIN" 2023-09-26T22:33:41,196 -- Installing: /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/_skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/share/CASMcode_crystallography/cmake/CASMcode_crystallographyTargets.cmake 2023-09-26T22:33:41,199 -- Installing: /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/_skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/share/CASMcode_crystallography/cmake/CASMcode_crystallographyTargets-release.cmake 2023-09-26T22:33:41,202 -- Installing: /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/_skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/share/CASMcode_crystallography/cmake/CASMcode_crystallographyConfig.cmake 2023-09-26T22:33:41,204 -- Installing: /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/_skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/share/CASMcode_crystallography/cmake/CASMcode_crystallographyConfigVersion.cmake 2023-09-26T22:33:41,208 -- Installing: /tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/_skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/xtal/_xtal.cpython-311-arm-linux-gnueabihf.so 2023-09-26T22:33:41,227 -- Set runtime path of "/tmp/pip-wheel-32n71749/libcasm-xtal_cc77a4585b38474b931109f312d0b19e/_skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/xtal/_xtal.cpython-311-arm-linux-gnueabihf.so" to "$ORIGIN/../lib" 2023-09-26T22:33:41,251 copying python/libcasm/xtal/lattices.py -> _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/xtal/lattices.py 2023-09-26T22:33:41,253 copying python/libcasm/xtal/__init__.py -> _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/xtal/__init__.py 2023-09-26T22:33:41,255 copying python/libcasm/xtal/prims.py -> _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/xtal/prims.py 2023-09-26T22:33:41,257 copying python/libcasm/xtal/structures.py -> _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/xtal/structures.py 2023-09-26T22:33:41,305 running bdist_wheel 2023-09-26T22:33:41,312 running build 2023-09-26T22:33:41,313 running build_py 2023-09-26T22:33:41,315 creating _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311 2023-09-26T22:33:41,316 creating _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm 2023-09-26T22:33:41,317 creating _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/xtal 2023-09-26T22:33:41,318 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/xtal/lattices.py -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/xtal 2023-09-26T22:33:41,320 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/xtal/__init__.py -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/xtal 2023-09-26T22:33:41,322 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/xtal/prims.py -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/xtal 2023-09-26T22:33:41,324 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/xtal/structures.py -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/xtal 2023-09-26T22:33:41,332 creating _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include 2023-09-26T22:33:41,333 creating _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm 2023-09-26T22:33:41,334 creating _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,335 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/OccupantDoFIsEquivalent.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,338 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/BasicStructureTools.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,341 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/Lattice.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,344 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/StrucMapCalculatorInterface.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,347 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/Site.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,350 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/CanonicalForm.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,352 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/SimpleStructure.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,355 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/HermiteCounter.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,358 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/SimpleStrucMapCalculator.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,361 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/StrainConverter.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,364 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/DoFSet.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,367 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/DoFDecl.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,369 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/SymInfo.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,372 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/LinearIndexConverter.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,375 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/AnisoValTraits.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,378 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/Superlattice.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,380 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/LatticeMap.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,383 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/BasicStructure.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,386 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/IntegralCoordinateWithin.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,389 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/Strain.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,392 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/UnitCellCoord.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,395 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/LatticeIsEquivalent.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,397 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/Molecule.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,400 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/version.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,403 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/UnitCellCoordRep.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,405 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/SymTools.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,408 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/SuperlatticeEnumerator.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,412 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/StrucMapping.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,416 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/Coordinate.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,419 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/SimpleStructureTools.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,422 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/UnitCellCoordTraits.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,424 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/Niggli.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,427 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/SymRepBuilder.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,431 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/CoordinateSystems.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,434 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/SymTypeComparator.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,436 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/SpeciesProperty.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,438 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/SymType.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,440 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/Adapter.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography 2023-09-26T22:33:41,442 creating _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/io 2023-09-26T22:33:41,444 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/io/SimpleStructureIO.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/io 2023-09-26T22:33:41,446 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/io/DoFSetIO.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/io 2023-09-26T22:33:41,448 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/io/SymInfo_stream_io.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/io 2023-09-26T22:33:41,450 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/io/LatticeIO.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/io 2023-09-26T22:33:41,452 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/io/SuperlatticeEnumeratorIO.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/io 2023-09-26T22:33:41,454 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/io/BasicStructureIO.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/io 2023-09-26T22:33:41,456 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/io/UnitCellCoordIO.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/io 2023-09-26T22:33:41,458 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/io/VaspIO.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/io 2023-09-26T22:33:41,460 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/io/SymInfo_json_io.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/io 2023-09-26T22:33:41,462 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/include/casm/crystallography/io/jsonStruc.hh -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/io 2023-09-26T22:33:41,464 creating _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/lib 2023-09-26T22:33:41,465 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/lib/libcasm_crystallography.so -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/lib 2023-09-26T22:33:41,494 creating _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/share 2023-09-26T22:33:41,494 creating _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/share/CASMcode_crystallography 2023-09-26T22:33:41,495 creating _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/share/CASMcode_crystallography/cmake 2023-09-26T22:33:41,496 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/share/CASMcode_crystallography/cmake/CASMcode_crystallographyTargets.cmake -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/share/CASMcode_crystallography/cmake 2023-09-26T22:33:41,498 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/share/CASMcode_crystallography/cmake/CASMcode_crystallographyTargets-release.cmake -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/share/CASMcode_crystallography/cmake 2023-09-26T22:33:41,500 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/share/CASMcode_crystallography/cmake/CASMcode_crystallographyConfig.cmake -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/share/CASMcode_crystallography/cmake 2023-09-26T22:33:41,502 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/share/CASMcode_crystallography/cmake/CASMcode_crystallographyConfigVersion.cmake -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/share/CASMcode_crystallography/cmake 2023-09-26T22:33:41,505 copying _skbuild/linux-armv7l-3.11/cmake-install/python/libcasm/xtal/_xtal.cpython-311-arm-linux-gnueabihf.so -> _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/xtal 2023-09-26T22:33:41,523 copied 4 files 2023-09-26T22:33:41,523 running build_ext 2023-09-26T22:33:41,533 installing to _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel 2023-09-26T22:33:41,534 running install 2023-09-26T22:33:41,553 running install_lib 2023-09-26T22:33:41,554 creating _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l 2023-09-26T22:33:41,555 creating _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel 2023-09-26T22:33:41,556 creating _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm 2023-09-26T22:33:41,558 creating _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/lib 2023-09-26T22:33:41,559 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/lib/libcasm_crystallography.so -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/lib 2023-09-26T22:33:41,582 creating _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/xtal 2023-09-26T22:33:41,583 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/xtal/lattices.py -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/xtal 2023-09-26T22:33:41,586 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/xtal/_xtal.cpython-311-arm-linux-gnueabihf.so -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/xtal 2023-09-26T22:33:41,601 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/xtal/__init__.py -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/xtal 2023-09-26T22:33:41,603 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/xtal/prims.py -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/xtal 2023-09-26T22:33:41,605 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/xtal/structures.py -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/xtal 2023-09-26T22:33:41,608 creating _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include 2023-09-26T22:33:41,609 creating _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm 2023-09-26T22:33:41,611 creating _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,612 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/AnisoValTraits.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,614 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/CanonicalForm.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,616 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/SymTypeComparator.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,618 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/Niggli.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,620 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/DoFSet.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,622 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/LatticeMap.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,625 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/Coordinate.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,627 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/StrainConverter.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,629 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/UnitCellCoordRep.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,631 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/SuperlatticeEnumerator.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,634 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/LatticeIsEquivalent.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,636 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/SymTools.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,638 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/Site.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,640 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/CoordinateSystems.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,642 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/SimpleStructureTools.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,644 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/Lattice.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,646 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/SimpleStrucMapCalculator.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,648 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/SimpleStructure.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,650 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/Superlattice.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,652 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/StrucMapCalculatorInterface.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,655 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/Molecule.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,657 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/DoFDecl.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,659 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/SymRepBuilder.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,662 creating _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography/io 2023-09-26T22:33:41,663 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/io/UnitCellCoordIO.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography/io 2023-09-26T22:33:41,665 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/io/jsonStruc.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography/io 2023-09-26T22:33:41,667 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/io/LatticeIO.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography/io 2023-09-26T22:33:41,669 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/io/BasicStructureIO.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography/io 2023-09-26T22:33:41,671 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/io/SimpleStructureIO.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography/io 2023-09-26T22:33:41,672 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/io/SuperlatticeEnumeratorIO.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography/io 2023-09-26T22:33:41,674 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/io/DoFSetIO.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography/io 2023-09-26T22:33:41,676 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/io/VaspIO.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography/io 2023-09-26T22:33:41,677 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/io/SymInfo_stream_io.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography/io 2023-09-26T22:33:41,679 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/io/SymInfo_json_io.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography/io 2023-09-26T22:33:41,681 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/IntegralCoordinateWithin.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,683 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/Strain.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,685 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/SpeciesProperty.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,687 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/UnitCellCoordTraits.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,689 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/BasicStructureTools.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,691 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/version.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,693 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/UnitCellCoord.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,695 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/Adapter.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,697 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/LinearIndexConverter.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,700 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/OccupantDoFIsEquivalent.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,701 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/BasicStructure.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,704 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/SymType.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,706 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/StrucMapping.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,709 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/HermiteCounter.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,711 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/include/casm/crystallography/SymInfo.hh -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/include/casm/crystallography 2023-09-26T22:33:41,713 creating _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/share 2023-09-26T22:33:41,714 creating _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/share/CASMcode_crystallography 2023-09-26T22:33:41,715 creating _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/share/CASMcode_crystallography/cmake 2023-09-26T22:33:41,717 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/share/CASMcode_crystallography/cmake/CASMcode_crystallographyConfigVersion.cmake -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/share/CASMcode_crystallography/cmake 2023-09-26T22:33:41,719 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/share/CASMcode_crystallography/cmake/CASMcode_crystallographyTargets-release.cmake -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/share/CASMcode_crystallography/cmake 2023-09-26T22:33:41,720 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/share/CASMcode_crystallography/cmake/CASMcode_crystallographyConfig.cmake -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/share/CASMcode_crystallography/cmake 2023-09-26T22:33:41,722 copying _skbuild/linux-armv7l-3.11/setuptools/lib.linux-armv7l-cpython-311/libcasm/share/CASMcode_crystallography/cmake/CASMcode_crystallographyTargets.cmake -> _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm/share/CASMcode_crystallography/cmake 2023-09-26T22:33:41,724 copied 58 files 2023-09-26T22:33:41,725 running install_egg_info 2023-09-26T22:33:41,731 running egg_info 2023-09-26T22:33:41,732 creating libcasm_xtal.egg-info 2023-09-26T22:33:41,741 writing libcasm_xtal.egg-info/PKG-INFO 2023-09-26T22:33:41,745 writing dependency_links to libcasm_xtal.egg-info/dependency_links.txt 2023-09-26T22:33:41,747 writing requirements to libcasm_xtal.egg-info/requires.txt 2023-09-26T22:33:41,748 writing top-level names to libcasm_xtal.egg-info/top_level.txt 2023-09-26T22:33:41,749 writing manifest file 'libcasm_xtal.egg-info/SOURCES.txt' 2023-09-26T22:33:41,767 reading manifest file 'libcasm_xtal.egg-info/SOURCES.txt' 2023-09-26T22:33:41,768 reading manifest template 'MANIFEST.in' 2023-09-26T22:33:41,797 no previously-included directories found matching 'python/doc/_build' 2023-09-26T22:33:41,797 no previously-included directories found matching 'python/doc/reference/libcasm/_autosummary' 2023-09-26T22:33:41,802 warning: no files found matching '*.in' under directory 'python/libcasm' 2023-09-26T22:33:41,811 warning: no files found matching 'CONTRIBUTE.md' 2023-09-26T22:33:41,812 adding license file 'LICENSE' 2023-09-26T22:33:41,821 writing manifest file 'libcasm_xtal.egg-info/SOURCES.txt' 2023-09-26T22:33:41,824 Copying libcasm_xtal.egg-info to _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm_xtal-2.0a3-py3.11.egg-info 2023-09-26T22:33:41,835 running install_scripts 2023-09-26T22:33:41,836 copied 0 files 2023-09-26T22:33:41,882 creating _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel/libcasm_xtal-2.0a3.dist-info/WHEEL 2023-09-26T22:33:41,885 creating '/tmp/pip-wheel-uaqde29x/.tmp-3ruscri5/libcasm_xtal-2.0a3-cp311-cp311-linux_armv7l.whl' and adding '_skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel' to it 2023-09-26T22:33:41,889 adding 'libcasm/include/casm/crystallography/Adapter.hh' 2023-09-26T22:33:41,891 adding 'libcasm/include/casm/crystallography/AnisoValTraits.hh' 2023-09-26T22:33:41,893 adding 'libcasm/include/casm/crystallography/BasicStructure.hh' 2023-09-26T22:33:41,894 adding 'libcasm/include/casm/crystallography/BasicStructureTools.hh' 2023-09-26T22:33:41,896 adding 'libcasm/include/casm/crystallography/CanonicalForm.hh' 2023-09-26T22:33:41,898 adding 'libcasm/include/casm/crystallography/Coordinate.hh' 2023-09-26T22:33:41,900 adding 'libcasm/include/casm/crystallography/CoordinateSystems.hh' 2023-09-26T22:33:41,901 adding 'libcasm/include/casm/crystallography/DoFDecl.hh' 2023-09-26T22:33:41,903 adding 'libcasm/include/casm/crystallography/DoFSet.hh' 2023-09-26T22:33:41,905 adding 'libcasm/include/casm/crystallography/HermiteCounter.hh' 2023-09-26T22:33:41,906 adding 'libcasm/include/casm/crystallography/IntegralCoordinateWithin.hh' 2023-09-26T22:33:41,908 adding 'libcasm/include/casm/crystallography/Lattice.hh' 2023-09-26T22:33:41,910 adding 'libcasm/include/casm/crystallography/LatticeIsEquivalent.hh' 2023-09-26T22:33:41,911 adding 'libcasm/include/casm/crystallography/LatticeMap.hh' 2023-09-26T22:33:41,913 adding 'libcasm/include/casm/crystallography/LinearIndexConverter.hh' 2023-09-26T22:33:41,915 adding 'libcasm/include/casm/crystallography/Molecule.hh' 2023-09-26T22:33:41,916 adding 'libcasm/include/casm/crystallography/Niggli.hh' 2023-09-26T22:33:41,918 adding 'libcasm/include/casm/crystallography/OccupantDoFIsEquivalent.hh' 2023-09-26T22:33:41,919 adding 'libcasm/include/casm/crystallography/SimpleStrucMapCalculator.hh' 2023-09-26T22:33:41,921 adding 'libcasm/include/casm/crystallography/SimpleStructure.hh' 2023-09-26T22:33:41,922 adding 'libcasm/include/casm/crystallography/SimpleStructureTools.hh' 2023-09-26T22:33:41,924 adding 'libcasm/include/casm/crystallography/Site.hh' 2023-09-26T22:33:41,925 adding 'libcasm/include/casm/crystallography/SpeciesProperty.hh' 2023-09-26T22:33:41,926 adding 'libcasm/include/casm/crystallography/Strain.hh' 2023-09-26T22:33:41,928 adding 'libcasm/include/casm/crystallography/StrainConverter.hh' 2023-09-26T22:33:41,929 adding 'libcasm/include/casm/crystallography/StrucMapCalculatorInterface.hh' 2023-09-26T22:33:41,934 adding 'libcasm/include/casm/crystallography/StrucMapping.hh' 2023-09-26T22:33:41,936 adding 'libcasm/include/casm/crystallography/Superlattice.hh' 2023-09-26T22:33:41,938 adding 'libcasm/include/casm/crystallography/SuperlatticeEnumerator.hh' 2023-09-26T22:33:41,940 adding 'libcasm/include/casm/crystallography/SymInfo.hh' 2023-09-26T22:33:41,942 adding 'libcasm/include/casm/crystallography/SymRepBuilder.hh' 2023-09-26T22:33:41,944 adding 'libcasm/include/casm/crystallography/SymTools.hh' 2023-09-26T22:33:41,945 adding 'libcasm/include/casm/crystallography/SymType.hh' 2023-09-26T22:33:41,947 adding 'libcasm/include/casm/crystallography/SymTypeComparator.hh' 2023-09-26T22:33:41,948 adding 'libcasm/include/casm/crystallography/UnitCellCoord.hh' 2023-09-26T22:33:41,949 adding 'libcasm/include/casm/crystallography/UnitCellCoordRep.hh' 2023-09-26T22:33:41,951 adding 'libcasm/include/casm/crystallography/UnitCellCoordTraits.hh' 2023-09-26T22:33:41,952 adding 'libcasm/include/casm/crystallography/version.hh' 2023-09-26T22:33:41,954 adding 'libcasm/include/casm/crystallography/io/BasicStructureIO.hh' 2023-09-26T22:33:41,955 adding 'libcasm/include/casm/crystallography/io/DoFSetIO.hh' 2023-09-26T22:33:41,956 adding 'libcasm/include/casm/crystallography/io/LatticeIO.hh' 2023-09-26T22:33:41,957 adding 'libcasm/include/casm/crystallography/io/SimpleStructureIO.hh' 2023-09-26T22:33:41,958 adding 'libcasm/include/casm/crystallography/io/SuperlatticeEnumeratorIO.hh' 2023-09-26T22:33:41,960 adding 'libcasm/include/casm/crystallography/io/SymInfo_json_io.hh' 2023-09-26T22:33:41,961 adding 'libcasm/include/casm/crystallography/io/SymInfo_stream_io.hh' 2023-09-26T22:33:41,962 adding 'libcasm/include/casm/crystallography/io/UnitCellCoordIO.hh' 2023-09-26T22:33:41,963 adding 'libcasm/include/casm/crystallography/io/VaspIO.hh' 2023-09-26T22:33:41,965 adding 'libcasm/include/casm/crystallography/io/jsonStruc.hh' 2023-09-26T22:33:42,254 adding 'libcasm/lib/libcasm_crystallography.so' 2023-09-26T22:33:42,268 adding 'libcasm/share/CASMcode_crystallography/cmake/CASMcode_crystallographyConfig.cmake' 2023-09-26T22:33:42,270 adding 'libcasm/share/CASMcode_crystallography/cmake/CASMcode_crystallographyConfigVersion.cmake' 2023-09-26T22:33:42,271 adding 'libcasm/share/CASMcode_crystallography/cmake/CASMcode_crystallographyTargets-release.cmake' 2023-09-26T22:33:42,272 adding 'libcasm/share/CASMcode_crystallography/cmake/CASMcode_crystallographyTargets.cmake' 2023-09-26T22:33:42,274 adding 'libcasm/xtal/__init__.py' 2023-09-26T22:33:42,410 adding 'libcasm/xtal/_xtal.cpython-311-arm-linux-gnueabihf.so' 2023-09-26T22:33:42,417 adding 'libcasm/xtal/lattices.py' 2023-09-26T22:33:42,418 adding 'libcasm/xtal/prims.py' 2023-09-26T22:33:42,420 adding 'libcasm/xtal/structures.py' 2023-09-26T22:33:42,425 adding 'libcasm_xtal-2.0a3.dist-info/LICENSE' 2023-09-26T22:33:42,426 adding 'libcasm_xtal-2.0a3.dist-info/METADATA' 2023-09-26T22:33:42,427 adding 'libcasm_xtal-2.0a3.dist-info/WHEEL' 2023-09-26T22:33:42,428 adding 'libcasm_xtal-2.0a3.dist-info/top_level.txt' 2023-09-26T22:33:42,429 adding 'libcasm_xtal-2.0a3.dist-info/RECORD' 2023-09-26T22:33:42,445 removing _skbuild/linux-armv7l-3.11/setuptools/bdist.linux-armv7l/wheel 2023-09-26T22:33:42,623 Building wheel for libcasm-xtal (pyproject.toml): finished with status 'done' 2023-09-26T22:33:42,653 Created wheel for libcasm-xtal: filename=libcasm_xtal-2.0a3-cp311-cp311-linux_armv7l.whl size=987439 sha256=93f63685aa33baa94bd0377f655a793f68179aa715211a0b423677682b3d2db1 2023-09-26T22:33:42,655 Stored in directory: /tmp/pip-ephem-wheel-cache-uxylpt73/wheels/0e/c7/23/5be04ba77e7daa91e3a251793a83ca8d3ad514475c4219d9b2 2023-09-26T22:33:42,667 Successfully built libcasm-xtal 2023-09-26T22:33:42,691 Removed build tracker: '/tmp/pip-build-tracker-3fkmxdna'