2023-09-27T03:35:21,261 Created temporary directory: /tmp/pip-build-tracker-83dcjh1_ 2023-09-27T03:35:21,262 Initialized build tracking at /tmp/pip-build-tracker-83dcjh1_ 2023-09-27T03:35:21,263 Created build tracker: /tmp/pip-build-tracker-83dcjh1_ 2023-09-27T03:35:21,263 Entered build tracker: /tmp/pip-build-tracker-83dcjh1_ 2023-09-27T03:35:21,264 Created temporary directory: /tmp/pip-wheel-5xtqb87t 2023-09-27T03:35:21,267 Created temporary directory: /tmp/pip-ephem-wheel-cache-nv12oa4f 2023-09-27T03:35:21,290 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-27T03:35:21,294 2 location(s) to search for versions of genomedata: 2023-09-27T03:35:21,294 * https://pypi.org/simple/genomedata/ 2023-09-27T03:35:21,294 * https://www.piwheels.org/simple/genomedata/ 2023-09-27T03:35:21,295 Fetching project page and analyzing links: https://pypi.org/simple/genomedata/ 2023-09-27T03:35:21,296 Getting page https://pypi.org/simple/genomedata/ 2023-09-27T03:35:21,297 Found index url https://pypi.org/simple/ 2023-09-27T03:35:21,437 Fetched page https://pypi.org/simple/genomedata/ as application/vnd.pypi.simple.v1+json 2023-09-27T03:35:21,444 Found link https://files.pythonhosted.org/packages/9f/d0/c09cd33ccd955e3585dd76eb00c0aa755f188ae653e0dd92eea33ab8d07b/genomedata-0.1.4.tar.gz (from https://pypi.org/simple/genomedata/), version: 0.1.4 2023-09-27T03:35:21,445 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/9b/fa/f10624ccb807792a8070ed943c3603ae6adea70a6ea5c47ca191e54cf7e8/genomedata-0.1.5-py2.5.egg (from https://pypi.org/simple/genomedata/) 2023-09-27T03:35:21,446 Found link https://files.pythonhosted.org/packages/d1/bd/64c3331f416dda32d38ca8f4c232926d0e8b2fd1ddf9c7827dd2036c19a9/genomedata-0.1.5.tar.gz (from https://pypi.org/simple/genomedata/), version: 0.1.5 2023-09-27T03:35:21,446 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/ee/e2/c888d35113765be0c1083eebe734a4b743741c9eeb758ba1ceae4be03965/genomedata-0.1.6-py2.5.egg (from https://pypi.org/simple/genomedata/) 2023-09-27T03:35:21,447 Found link https://files.pythonhosted.org/packages/db/3c/3a9f9441a2d9b07eaf46a3bc8592fc5c00705ab047fff6d1bf83738187c2/genomedata-0.1.6.tar.gz (from https://pypi.org/simple/genomedata/), version: 0.1.6 2023-09-27T03:35:21,447 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/e6/50/9278c9bb1197cf4890aba00e2694452b9543009717d6ef0b7a0abc331f73/genomedata-1.0.0-py2.5.egg (from https://pypi.org/simple/genomedata/) 2023-09-27T03:35:21,448 Found link https://files.pythonhosted.org/packages/53/7b/952cb445c3f19ff3fcc5858d1aadd6b7f2a2bf1aedaf3c69f09384008bc7/genomedata-1.0.0.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.0.0 2023-09-27T03:35:21,449 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/e3/e5/715b60d2ccd6e1b09dc00013885ddc91d0d00a13abba13d0b4ae5d0e655f/genomedata-1.0.1-py2.5.egg (from https://pypi.org/simple/genomedata/) 2023-09-27T03:35:21,449 Found link https://files.pythonhosted.org/packages/ca/6f/029e8fa74efe34958ab94c1dbe09693a16f0dbd3ff9277a26c1e2e4bc06d/genomedata-1.0.1.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.0.1 2023-09-27T03:35:21,450 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/02/23/b7f1ae2c30e6c8aa9a53205a090851feea5a09298a268d6aa4315b60068b/genomedata-1.1.0-py2.5.egg (from https://pypi.org/simple/genomedata/) 2023-09-27T03:35:21,451 Found link https://files.pythonhosted.org/packages/d3/a5/276928eb1ede8c99467d8dabb75498304a2262e030fea4b8bd217f0c047a/genomedata-1.1.0.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.1.0 2023-09-27T03:35:21,451 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/3c/3a/186c602e584cfc0c76b13b0bcf554e82648aae6f8e0a6836df258ea23418/genomedata-1.1.1-py2.5.egg (from https://pypi.org/simple/genomedata/) 2023-09-27T03:35:21,452 Found link https://files.pythonhosted.org/packages/41/be/56ca09d389d8fa4406dde7a9b32d9953fb9ba78d02e0fc640b4946503696/genomedata-1.1.1.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.1.1 2023-09-27T03:35:21,452 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/cb/15/eccac8c39dcd9c48dafd5a8ad77f77e88a2707e527eb765df112ecd59f3b/genomedata-1.2.0-py2.5.egg (from https://pypi.org/simple/genomedata/) 2023-09-27T03:35:21,453 Found link https://files.pythonhosted.org/packages/ee/b4/9f05a26671745bf9bb0c657b65eb3c6973a5adea7c8172c40efcd7bee6d8/genomedata-1.2.0.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.2.0 2023-09-27T03:35:21,454 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/93/5c/7a96b02d1a0d7c33b43710d321371d3fd748059ae98d57c07863944f0b2b/genomedata-1.2.1-py2.5.egg (from https://pypi.org/simple/genomedata/) 2023-09-27T03:35:21,454 Found link https://files.pythonhosted.org/packages/84/4d/75af402b72884de9a8f4a7b04bc2ecf367c00286fac827f83ff840f926b6/genomedata-1.2.1.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.2.1 2023-09-27T03:35:21,455 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/9a/f8/fe1ea521ccf7bed51cbc506eee09bde20cd7a13be074a66bf260c9ca00c2/genomedata-1.2.2-py2.5.egg (from https://pypi.org/simple/genomedata/) 2023-09-27T03:35:21,455 Found link https://files.pythonhosted.org/packages/29/2f/2daf3f2c913c2427c5f72f8bc6daa800ddb6854d923488ec03b05096ace6/genomedata-1.2.2.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.2.2 2023-09-27T03:35:21,456 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/9d/5f/10e8c1950fb2444d9977d8e063b088e23e027264b8060b671a76b371e6c2/genomedata-1.3.2-py2.7.egg (from https://pypi.org/simple/genomedata/) 2023-09-27T03:35:21,457 Found link https://files.pythonhosted.org/packages/c2/ff/01de9d35322f254787541ae050d6805dda9bb6d57fbfd57a1f0ce1996405/genomedata-1.3.2.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.3.2 2023-09-27T03:35:21,457 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/5d/e7/b8880f2b7c14186cd3c608dd2164ed854624899458bad7ed2a5ffe73a41d/genomedata-1.3.3-py2.7.egg (from https://pypi.org/simple/genomedata/) 2023-09-27T03:35:21,458 Found link https://files.pythonhosted.org/packages/8a/fe/6589545018763ed382eef6206bbedd924100d9b3795ad63b982f1accb030/genomedata-1.3.3.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.3.3 2023-09-27T03:35:21,458 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/f9/60/7a38a31a5f456347baad86b9fc3ff72573b974711bee55be7fb571209991/genomedata-1.3.4-py2.7.egg (from https://pypi.org/simple/genomedata/) 2023-09-27T03:35:21,459 Found link https://files.pythonhosted.org/packages/97/2c/ed8252cf78fed9a0b83bcc3e5ad203502994e1ee4498d9323eb06a37c76e/genomedata-1.3.4.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.3.4 2023-09-27T03:35:21,459 Found link https://files.pythonhosted.org/packages/ae/c8/504b3674a150128e61f5cd075900cc2139e0ac48dabdb70ddf314fbe8424/genomedata-1.3.5.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.3.5 2023-09-27T03:35:21,460 Found link https://files.pythonhosted.org/packages/cd/3a/a466d62a79ccc0926f32c9998f712c14140a0593fc9a487504b202dd18bd/genomedata-1.3.6.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.3.6 2023-09-27T03:35:21,461 Found link https://files.pythonhosted.org/packages/8d/ab/60c0ba4affa11f2b2a413aa39956bc79707ef6b6fa9b9712e2d1d412442b/genomedata-1.4.0.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.4.0 2023-09-27T03:35:21,461 Found link https://files.pythonhosted.org/packages/53/1f/2e267e7607ac3a8e85e79238139fc4c0aa66c714ec2c51ed30422790ca45/genomedata-1.4.1.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.4.1 2023-09-27T03:35:21,462 Found link https://files.pythonhosted.org/packages/52/e0/c22e9b44a897472cf7c315d41ca50b1454ea7e650cda88326f55682ac328/genomedata-1.4.2.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.4.2 2023-09-27T03:35:21,463 Found link https://files.pythonhosted.org/packages/a4/fb/5f226c2d1a7b0c30155ef1bc766a57a37b679638eca9b03af587c266932d/genomedata-1.4.3.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.4.3 2023-09-27T03:35:21,464 Found link https://files.pythonhosted.org/packages/ae/a8/095d15019a28d370b0f81a5adb289828dee17b5ac5e069518024526996f6/genomedata-1.4.4.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.4.4 2023-09-27T03:35:21,464 Found link https://files.pythonhosted.org/packages/3b/a2/690e07a7b11ae2f1892f8858a19b725e7477e801da69074eb84fdee664f2/genomedata-1.5.0.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.5.0 2023-09-27T03:35:21,465 Skipping link: No binaries permitted for genomedata: https://files.pythonhosted.org/packages/83/d3/e0d08c4c6d9b81a8f2de3d31004fd175e1adf8b7bdd1dfa97181559b6785/genomedata-1.6.0-cp37-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/genomedata/) (requires-python:>=3.7) 2023-09-27T03:35:21,466 Found link https://files.pythonhosted.org/packages/c8/3e/5c129fe3741973f82237960de335321215ffdb52fa6408e2a0485e1f8540/genomedata-1.6.0.tar.gz (from https://pypi.org/simple/genomedata/) (requires-python:>=3.7), version: 1.6.0 2023-09-27T03:35:21,466 Skipping link: No binaries permitted for genomedata: https://files.pythonhosted.org/packages/49/95/a93e72f833d33b8172c84ee33755fc7436a5a24fb2d6d5cc1c01d2755d93/genomedata-1.7.0-cp37-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/genomedata/) (requires-python:>=3.7) 2023-09-27T03:35:21,467 Found link https://files.pythonhosted.org/packages/fa/89/7fceac8d18f037b3a9ad34bb0e77f2b50fbac68ae41c2841c3a12ab38abb/genomedata-1.7.0.tar.gz (from https://pypi.org/simple/genomedata/) (requires-python:>=3.7), version: 1.7.0 2023-09-27T03:35:21,468 Skipping link: No binaries permitted for genomedata: https://files.pythonhosted.org/packages/86/8d/978aac04cc015d144c15972a6e975a4796fb5d240d5fc3fbb6578e0815e3/genomedata-1.7.1-cp37-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/genomedata/) (requires-python:>=3.7) 2023-09-27T03:35:21,469 Found link https://files.pythonhosted.org/packages/af/5a/0861b58738df9806ddcdd0cbf980b5e6f79f0d1ea9a5950d792f2b21472e/genomedata-1.7.1.tar.gz (from https://pypi.org/simple/genomedata/) (requires-python:>=3.7), version: 1.7.1 2023-09-27T03:35:21,469 Fetching project page and analyzing links: https://www.piwheels.org/simple/genomedata/ 2023-09-27T03:35:21,470 Getting page https://www.piwheels.org/simple/genomedata/ 2023-09-27T03:35:21,471 Found index url https://www.piwheels.org/simple/ 2023-09-27T03:35:21,645 Fetched page https://www.piwheels.org/simple/genomedata/ as text/html 2023-09-27T03:35:21,649 Skipping link: No binaries permitted for genomedata: https://www.piwheels.org/simple/genomedata/genomedata-1.7.1-cp37-abi3-linux_armv7l.whl#sha256=518f4418dd4831c5ae346c16b6e96b8a9e79a011930d9c4fbe98b29de85cc169 (from https://www.piwheels.org/simple/genomedata/) (requires-python:>=3.7) 2023-09-27T03:35:21,649 Skipping link: No binaries permitted for genomedata: https://www.piwheels.org/simple/genomedata/genomedata-1.7.1-cp37-abi3-linux_armv6l.whl#sha256=518f4418dd4831c5ae346c16b6e96b8a9e79a011930d9c4fbe98b29de85cc169 (from https://www.piwheels.org/simple/genomedata/) (requires-python:>=3.7) 2023-09-27T03:35:21,650 Skipping link: No binaries permitted for genomedata: https://www.piwheels.org/simple/genomedata/genomedata-1.7.0-cp37-abi3-linux_armv7l.whl#sha256=967a81218dd10eb1de7b151261dd570fa5a75f2b7c47f1c798e75e003dd3ff84 (from https://www.piwheels.org/simple/genomedata/) (requires-python:>=3.7) 2023-09-27T03:35:21,650 Skipping link: No binaries permitted for genomedata: https://www.piwheels.org/simple/genomedata/genomedata-1.7.0-cp37-abi3-linux_armv6l.whl#sha256=967a81218dd10eb1de7b151261dd570fa5a75f2b7c47f1c798e75e003dd3ff84 (from https://www.piwheels.org/simple/genomedata/) (requires-python:>=3.7) 2023-09-27T03:35:21,651 Skipping link: No binaries permitted for genomedata: https://www.piwheels.org/simple/genomedata/genomedata-1.6.0-cp37-abi3-linux_armv7l.whl#sha256=1dfaaa9f1910becb35328b88cf4ea1866bfb0efb37d60b0078b1d0cb7247f345 (from https://www.piwheels.org/simple/genomedata/) (requires-python:>=3.7) 2023-09-27T03:35:21,652 Skipping link: No binaries permitted for genomedata: https://www.piwheels.org/simple/genomedata/genomedata-1.6.0-cp37-abi3-linux_armv6l.whl#sha256=1dfaaa9f1910becb35328b88cf4ea1866bfb0efb37d60b0078b1d0cb7247f345 (from https://www.piwheels.org/simple/genomedata/) (requires-python:>=3.7) 2023-09-27T03:35:21,652 Skipping link: No binaries permitted for genomedata: https://www.piwheels.org/simple/genomedata/genomedata-1.5.0-py3-none-any.whl#sha256=52913a08eca7171a79a79fb59e558dd3deb2ecfbedd3719f7e79823d6c16e8de (from https://www.piwheels.org/simple/genomedata/) 2023-09-27T03:35:21,653 Skipping link: No binaries permitted for genomedata: https://www.piwheels.org/simple/genomedata/genomedata-1.4.4-py3-none-any.whl#sha256=947997fc388a1793e361a08e235f4dc03b882243eeae4727b245a5b3a49ae466 (from https://www.piwheels.org/simple/genomedata/) 2023-09-27T03:35:21,653 Skipping link: not a file: https://www.piwheels.org/simple/genomedata/ 2023-09-27T03:35:21,654 Skipping link: not a file: https://pypi.org/simple/genomedata/ 2023-09-27T03:35:21,675 Given no hashes to check 1 links for project 'genomedata': discarding no candidates 2023-09-27T03:35:21,693 Collecting genomedata==1.7.1 2023-09-27T03:35:21,695 Created temporary directory: /tmp/pip-unpack-6ji1tgz1 2023-09-27T03:35:21,920 Downloading genomedata-1.7.1.tar.gz (1.9 MB) 2023-09-27T03:35:22,671 Added genomedata==1.7.1 from https://files.pythonhosted.org/packages/af/5a/0861b58738df9806ddcdd0cbf980b5e6f79f0d1ea9a5950d792f2b21472e/genomedata-1.7.1.tar.gz to build tracker '/tmp/pip-build-tracker-83dcjh1_' 2023-09-27T03:35:22,679 Created temporary directory: /tmp/pip-build-env-asrjijzo 2023-09-27T03:35:22,685 Installing build dependencies: started 2023-09-27T03:35:22,687 Running command pip subprocess to install build dependencies 2023-09-27T03:35:24,130 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-09-27T03:35:24,644 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-27T03:35:26,193 Collecting setuptools 2023-09-27T03:35:26,194 Obtaining dependency information for setuptools from https://files.pythonhosted.org/packages/bb/26/7945080113158354380a12ce26873dd6c1ebd88d47f5bc24e2c5bb38c16a/setuptools-68.2.2-py3-none-any.whl.metadata 2023-09-27T03:35:26,200 Using cached setuptools-68.2.2-py3-none-any.whl.metadata (6.3 kB) 2023-09-27T03:35:26,491 Collecting setuptools-scm 2023-09-27T03:35:26,491 Obtaining dependency information for setuptools-scm from https://files.pythonhosted.org/packages/ca/04/4ea91c627355ae6d976bf7f1fc2815372a96b1b87bf290c8d726d10a08a1/setuptools_scm-8.0.3-py3-none-any.whl.metadata 2023-09-27T03:35:26,498 Using cached setuptools_scm-8.0.3-py3-none-any.whl.metadata (6.1 kB) 2023-09-27T03:35:27,057 Collecting packaging>=20 (from setuptools-scm) 2023-09-27T03:35:27,073 Using cached https://www.piwheels.org/simple/packaging/packaging-23.1-py3-none-any.whl (48 kB) 2023-09-27T03:35:27,103 Using cached setuptools-68.2.2-py3-none-any.whl (807 kB) 2023-09-27T03:35:27,123 Using cached setuptools_scm-8.0.3-py3-none-any.whl (41 kB) 2023-09-27T03:35:30,440 Installing collected packages: setuptools, packaging, setuptools-scm 2023-09-27T03:35:33,880 Successfully installed packaging-23.1 setuptools-68.2.2 setuptools-scm-8.0.3 2023-09-27T03:35:34,420 Installing build dependencies: finished with status 'done' 2023-09-27T03:35:34,423 Getting requirements to build wheel: started 2023-09-27T03:35:34,425 Running command Getting requirements to build wheel 2023-09-27T03:35:35,306 running egg_info 2023-09-27T03:35:35,311 writing genomedata.egg-info/PKG-INFO 2023-09-27T03:35:35,315 writing dependency_links to genomedata.egg-info/dependency_links.txt 2023-09-27T03:35:35,317 writing entry points to genomedata.egg-info/entry_points.txt 2023-09-27T03:35:35,319 writing requirements to genomedata.egg-info/requires.txt 2023-09-27T03:35:35,320 writing top-level names to genomedata.egg-info/top_level.txt 2023-09-27T03:35:35,359 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2023-09-27T03:35:35,363 reading manifest file 'genomedata.egg-info/SOURCES.txt' 2023-09-27T03:35:35,391 reading manifest template 'MANIFEST.in' 2023-09-27T03:35:35,393 no previously-included directories found matching 'Docker' 2023-09-27T03:35:35,393 no previously-included directories found matching '.github' 2023-09-27T03:35:35,394 warning: no previously-included files found matching '.gitignore' 2023-09-27T03:35:35,395 warning: no previously-included files found matching '.readthedocs.yml' 2023-09-27T03:35:35,395 warning: no previously-included files found matching 'environment.yml' 2023-09-27T03:35:35,396 adding license file 'LICENSE' 2023-09-27T03:35:35,403 writing manifest file 'genomedata.egg-info/SOURCES.txt' 2023-09-27T03:35:35,521 Getting requirements to build wheel: finished with status 'done' 2023-09-27T03:35:35,531 Installing backend dependencies: started 2023-09-27T03:35:35,533 Running command pip subprocess to install backend dependencies 2023-09-27T03:35:36,691 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-09-27T03:35:37,201 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-27T03:35:37,705 Collecting wheel 2023-09-27T03:35:37,721 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB) 2023-09-27T03:35:39,935 Installing collected packages: wheel 2023-09-27T03:35:40,158 Creating /tmp/pip-build-env-asrjijzo/normal/local/bin 2023-09-27T03:35:40,160 changing mode of /tmp/pip-build-env-asrjijzo/normal/local/bin/wheel to 755 2023-09-27T03:35:40,172 Successfully installed wheel-0.41.2 2023-09-27T03:35:40,665 Installing backend dependencies: finished with status 'done' 2023-09-27T03:35:40,667 Created temporary directory: /tmp/pip-modern-metadata-na7o4nc5 2023-09-27T03:35:40,670 Preparing metadata (pyproject.toml): started 2023-09-27T03:35:40,671 Running command Preparing metadata (pyproject.toml) 2023-09-27T03:35:41,556 running dist_info 2023-09-27T03:35:41,562 creating /tmp/pip-modern-metadata-na7o4nc5/genomedata.egg-info 2023-09-27T03:35:41,567 writing /tmp/pip-modern-metadata-na7o4nc5/genomedata.egg-info/PKG-INFO 2023-09-27T03:35:41,570 writing dependency_links to /tmp/pip-modern-metadata-na7o4nc5/genomedata.egg-info/dependency_links.txt 2023-09-27T03:35:41,572 writing entry points to /tmp/pip-modern-metadata-na7o4nc5/genomedata.egg-info/entry_points.txt 2023-09-27T03:35:41,574 writing requirements to /tmp/pip-modern-metadata-na7o4nc5/genomedata.egg-info/requires.txt 2023-09-27T03:35:41,575 writing top-level names to /tmp/pip-modern-metadata-na7o4nc5/genomedata.egg-info/top_level.txt 2023-09-27T03:35:41,576 writing manifest file '/tmp/pip-modern-metadata-na7o4nc5/genomedata.egg-info/SOURCES.txt' 2023-09-27T03:35:41,617 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2023-09-27T03:35:41,621 reading manifest file '/tmp/pip-modern-metadata-na7o4nc5/genomedata.egg-info/SOURCES.txt' 2023-09-27T03:35:41,623 reading manifest template 'MANIFEST.in' 2023-09-27T03:35:41,624 no previously-included directories found matching 'Docker' 2023-09-27T03:35:41,624 no previously-included directories found matching '.github' 2023-09-27T03:35:41,625 warning: no previously-included files found matching '.gitignore' 2023-09-27T03:35:41,625 warning: no previously-included files found matching '.readthedocs.yml' 2023-09-27T03:35:41,626 warning: no previously-included files found matching 'environment.yml' 2023-09-27T03:35:41,626 adding license file 'LICENSE' 2023-09-27T03:35:41,628 writing manifest file '/tmp/pip-modern-metadata-na7o4nc5/genomedata.egg-info/SOURCES.txt' 2023-09-27T03:35:41,629 creating '/tmp/pip-modern-metadata-na7o4nc5/genomedata-1.7.1.dist-info' 2023-09-27T03:35:41,791 Preparing metadata (pyproject.toml): finished with status 'done' 2023-09-27T03:35:41,796 Source in /tmp/pip-wheel-5xtqb87t/genomedata_a3d4c2c387784559ad5313a62a5c51c1 has version 1.7.1, which satisfies requirement genomedata==1.7.1 from https://files.pythonhosted.org/packages/af/5a/0861b58738df9806ddcdd0cbf980b5e6f79f0d1ea9a5950d792f2b21472e/genomedata-1.7.1.tar.gz 2023-09-27T03:35:41,797 Removed genomedata==1.7.1 from https://files.pythonhosted.org/packages/af/5a/0861b58738df9806ddcdd0cbf980b5e6f79f0d1ea9a5950d792f2b21472e/genomedata-1.7.1.tar.gz from build tracker '/tmp/pip-build-tracker-83dcjh1_' 2023-09-27T03:35:41,802 Created temporary directory: /tmp/pip-unpack-kbyonv0o 2023-09-27T03:35:41,803 Created temporary directory: /tmp/pip-unpack-11by0f2d 2023-09-27T03:35:41,812 Building wheels for collected packages: genomedata 2023-09-27T03:35:41,816 Created temporary directory: /tmp/pip-wheel-n2_bxnpq 2023-09-27T03:35:41,816 Destination directory: /tmp/pip-wheel-n2_bxnpq 2023-09-27T03:35:41,819 Building wheel for genomedata (pyproject.toml): started 2023-09-27T03:35:41,820 Running command Building wheel for genomedata (pyproject.toml) 2023-09-27T03:35:42,639 running bdist_wheel 2023-09-27T03:35:42,660 running build 2023-09-27T03:35:42,661 running build_py 2023-09-27T03:35:42,667 creating build 2023-09-27T03:35:42,667 creating build/lib.linux-armv7l-cpython-311 2023-09-27T03:35:42,668 creating build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T03:35:42,669 copying genomedata/_hardmask_parsers.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T03:35:42,671 copying genomedata/_bigwig.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T03:35:42,674 copying genomedata/_open_data.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T03:35:42,676 copying genomedata/__init__.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T03:35:42,678 copying genomedata/_hdf5.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T03:35:42,680 copying genomedata/_load_data.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T03:35:42,682 copying genomedata/_query.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T03:35:42,684 copying genomedata/_close_data.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T03:35:42,686 copying genomedata/_histogram.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T03:35:42,688 copying genomedata/load_genomedata.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T03:35:42,690 copying genomedata/_hardmask.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T03:35:42,692 copying genomedata/_util.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T03:35:42,694 copying genomedata/_report.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T03:35:42,696 copying genomedata/_load_seq.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T03:35:42,698 copying genomedata/_erase_data.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T03:35:42,700 copying genomedata/_chromosome.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T03:35:42,702 copying genomedata/_info.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T03:35:42,704 running egg_info 2023-09-27T03:35:42,708 writing genomedata.egg-info/PKG-INFO 2023-09-27T03:35:42,711 writing dependency_links to genomedata.egg-info/dependency_links.txt 2023-09-27T03:35:42,713 writing entry points to genomedata.egg-info/entry_points.txt 2023-09-27T03:35:42,714 writing requirements to genomedata.egg-info/requires.txt 2023-09-27T03:35:42,715 writing top-level names to genomedata.egg-info/top_level.txt 2023-09-27T03:35:42,740 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2023-09-27T03:35:42,743 reading manifest file 'genomedata.egg-info/SOURCES.txt' 2023-09-27T03:35:42,773 reading manifest template 'MANIFEST.in' 2023-09-27T03:35:42,774 no previously-included directories found matching 'Docker' 2023-09-27T03:35:42,775 no previously-included directories found matching '.github' 2023-09-27T03:35:42,776 warning: no previously-included files found matching '.gitignore' 2023-09-27T03:35:42,776 warning: no previously-included files found matching '.readthedocs.yml' 2023-09-27T03:35:42,777 warning: no previously-included files found matching 'environment.yml' 2023-09-27T03:35:42,777 adding license file 'LICENSE' 2023-09-27T03:35:42,784 writing manifest file 'genomedata.egg-info/SOURCES.txt' 2023-09-27T03:35:42,792 running build_ext 2023-09-27T03:35:42,797 building '_c_load_data' extension 2023-09-27T03:35:42,798 creating build/temp.linux-armv7l-cpython-311 2023-09-27T03:35:42,799 creating build/temp.linux-armv7l-cpython-311/src 2023-09-27T03:35:42,799 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DPy_LIMITED_API=0x03070000 -I/usr/include -I/usr/include/hdf5/serial -I/usr/include/python3.11 -c src/_c_load_data.c -o build/temp.linux-armv7l-cpython-311/src/_c_load_data.o 2023-09-27T03:35:43,212 src/_c_load_data.c: In function ‘load_data_from_stdin’: 2023-09-27T03:35:43,213 src/_c_load_data.c:132:13: warning: passing argument 1 of ‘load_data’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 2023-09-27T03:35:43,213 132 | load_data(gdfilename, trackname, (bool)verbose); 2023-09-27T03:35:43,214 | ^~~~~~~~~~ 2023-09-27T03:35:43,214 src/_c_load_data.c:122:22: note: expected ‘char *’ but argument is of type ‘const char *’ 2023-09-27T03:35:43,215 122 | void load_data(char* gdfilename, char* trackname, bool verbose); 2023-09-27T03:35:43,215 | ~~~~~~^~~~~~~~~~ 2023-09-27T03:35:43,216 src/_c_load_data.c:132:25: warning: passing argument 2 of ‘load_data’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 2023-09-27T03:35:43,216 132 | load_data(gdfilename, trackname, (bool)verbose); 2023-09-27T03:35:43,217 | ^~~~~~~~~ 2023-09-27T03:35:43,218 src/_c_load_data.c:122:40: note: expected ‘char *’ but argument is of type ‘const char *’ 2023-09-27T03:35:43,218 122 | void load_data(char* gdfilename, char* trackname, bool verbose); 2023-09-27T03:35:43,219 | ~~~~~~^~~~~~~~~ 2023-09-27T03:35:44,489 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/_c_load_data.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -L/usr/lib/arm-linux-gnueabihf -lhdf5 -lm -lz -o build/lib.linux-armv7l-cpython-311/genomedata/_c_load_data.abi3.so 2023-09-27T03:35:44,706 installing to build/bdist.linux-armv7l/wheel 2023-09-27T03:35:44,706 running install 2023-09-27T03:35:44,730 running install_lib 2023-09-27T03:35:44,735 creating build/bdist.linux-armv7l 2023-09-27T03:35:44,736 creating build/bdist.linux-armv7l/wheel 2023-09-27T03:35:44,738 creating build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T03:35:44,739 copying build/lib.linux-armv7l-cpython-311/genomedata/_hardmask_parsers.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T03:35:44,741 copying build/lib.linux-armv7l-cpython-311/genomedata/_bigwig.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T03:35:44,743 copying build/lib.linux-armv7l-cpython-311/genomedata/_open_data.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T03:35:44,745 copying build/lib.linux-armv7l-cpython-311/genomedata/__init__.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T03:35:44,748 copying build/lib.linux-armv7l-cpython-311/genomedata/_hdf5.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T03:35:44,750 copying build/lib.linux-armv7l-cpython-311/genomedata/_load_data.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T03:35:44,753 copying build/lib.linux-armv7l-cpython-311/genomedata/_query.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T03:35:44,755 copying build/lib.linux-armv7l-cpython-311/genomedata/_close_data.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T03:35:44,757 copying build/lib.linux-armv7l-cpython-311/genomedata/_histogram.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T03:35:44,759 copying build/lib.linux-armv7l-cpython-311/genomedata/load_genomedata.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T03:35:44,761 copying build/lib.linux-armv7l-cpython-311/genomedata/_hardmask.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T03:35:44,764 copying build/lib.linux-armv7l-cpython-311/genomedata/_util.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T03:35:44,766 copying build/lib.linux-armv7l-cpython-311/genomedata/_c_load_data.abi3.so -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T03:35:44,770 copying build/lib.linux-armv7l-cpython-311/genomedata/_report.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T03:35:44,772 copying build/lib.linux-armv7l-cpython-311/genomedata/_load_seq.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T03:35:44,774 copying build/lib.linux-armv7l-cpython-311/genomedata/_erase_data.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T03:35:44,776 copying build/lib.linux-armv7l-cpython-311/genomedata/_chromosome.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T03:35:44,779 copying build/lib.linux-armv7l-cpython-311/genomedata/_info.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T03:35:44,781 running install_egg_info 2023-09-27T03:35:44,786 Copying genomedata.egg-info to build/bdist.linux-armv7l/wheel/genomedata-1.7.1-py3.11.egg-info 2023-09-27T03:35:44,797 running install_scripts 2023-09-27T03:35:44,849 creating build/bdist.linux-armv7l/wheel/genomedata-1.7.1.dist-info/WHEEL 2023-09-27T03:35:44,852 creating '/tmp/pip-wheel-n2_bxnpq/.tmp-mqez089q/genomedata-1.7.1-cp37-abi3-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-09-27T03:35:44,855 adding 'genomedata/__init__.py' 2023-09-27T03:35:44,857 adding 'genomedata/_bigwig.py' 2023-09-27T03:35:44,872 adding 'genomedata/_c_load_data.abi3.so' 2023-09-27T03:35:44,876 adding 'genomedata/_chromosome.py' 2023-09-27T03:35:44,878 adding 'genomedata/_close_data.py' 2023-09-27T03:35:44,880 adding 'genomedata/_erase_data.py' 2023-09-27T03:35:44,881 adding 'genomedata/_hardmask.py' 2023-09-27T03:35:44,883 adding 'genomedata/_hardmask_parsers.py' 2023-09-27T03:35:44,886 adding 'genomedata/_hdf5.py' 2023-09-27T03:35:44,887 adding 'genomedata/_histogram.py' 2023-09-27T03:35:44,889 adding 'genomedata/_info.py' 2023-09-27T03:35:44,890 adding 'genomedata/_load_data.py' 2023-09-27T03:35:44,893 adding 'genomedata/_load_seq.py' 2023-09-27T03:35:44,894 adding 'genomedata/_open_data.py' 2023-09-27T03:35:44,895 adding 'genomedata/_query.py' 2023-09-27T03:35:44,897 adding 'genomedata/_report.py' 2023-09-27T03:35:44,898 adding 'genomedata/_util.py' 2023-09-27T03:35:44,900 adding 'genomedata/load_genomedata.py' 2023-09-27T03:35:44,904 adding 'genomedata-1.7.1.dist-info/LICENSE' 2023-09-27T03:35:44,906 adding 'genomedata-1.7.1.dist-info/METADATA' 2023-09-27T03:35:44,907 adding 'genomedata-1.7.1.dist-info/WHEEL' 2023-09-27T03:35:44,908 adding 'genomedata-1.7.1.dist-info/entry_points.txt' 2023-09-27T03:35:44,909 adding 'genomedata-1.7.1.dist-info/top_level.txt' 2023-09-27T03:35:44,910 adding 'genomedata-1.7.1.dist-info/RECORD' 2023-09-27T03:35:44,912 removing build/bdist.linux-armv7l/wheel 2023-09-27T03:35:45,067 Building wheel for genomedata (pyproject.toml): finished with status 'done' 2023-09-27T03:35:45,073 Created wheel for genomedata: filename=genomedata-1.7.1-cp37-abi3-linux_armv7l.whl size=91421 sha256=19a97915678858ee143c59bcd94f65e1e58bea4dc1f34fde8c360054f42d93e0 2023-09-27T03:35:45,075 Stored in directory: /tmp/pip-ephem-wheel-cache-nv12oa4f/wheels/e7/e4/48/f3c995230377373e1122f792a2e86768b1f4fc28777fb47f06 2023-09-27T03:35:45,086 Successfully built genomedata 2023-09-27T03:35:45,091 Removed build tracker: '/tmp/pip-build-tracker-83dcjh1_'