2023-09-27T07:30:26,655 Created temporary directory: /tmp/pip-build-tracker-3_8lbsxa 2023-09-27T07:30:26,656 Initialized build tracking at /tmp/pip-build-tracker-3_8lbsxa 2023-09-27T07:30:26,657 Created build tracker: /tmp/pip-build-tracker-3_8lbsxa 2023-09-27T07:30:26,657 Entered build tracker: /tmp/pip-build-tracker-3_8lbsxa 2023-09-27T07:30:26,658 Created temporary directory: /tmp/pip-wheel-sw6ozdtu 2023-09-27T07:30:26,661 Created temporary directory: /tmp/pip-ephem-wheel-cache-lfk9atq3 2023-09-27T07:30:26,683 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-27T07:30:26,686 2 location(s) to search for versions of genomedata: 2023-09-27T07:30:26,686 * https://pypi.org/simple/genomedata/ 2023-09-27T07:30:26,686 * https://www.piwheels.org/simple/genomedata/ 2023-09-27T07:30:26,687 Fetching project page and analyzing links: https://pypi.org/simple/genomedata/ 2023-09-27T07:30:26,688 Getting page https://pypi.org/simple/genomedata/ 2023-09-27T07:30:26,689 Found index url https://pypi.org/simple/ 2023-09-27T07:30:26,835 Fetched page https://pypi.org/simple/genomedata/ as application/vnd.pypi.simple.v1+json 2023-09-27T07:30:26,843 Found link https://files.pythonhosted.org/packages/9f/d0/c09cd33ccd955e3585dd76eb00c0aa755f188ae653e0dd92eea33ab8d07b/genomedata-0.1.4.tar.gz (from https://pypi.org/simple/genomedata/), version: 0.1.4 2023-09-27T07:30:26,844 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/9b/fa/f10624ccb807792a8070ed943c3603ae6adea70a6ea5c47ca191e54cf7e8/genomedata-0.1.5-py2.5.egg (from https://pypi.org/simple/genomedata/) 2023-09-27T07:30:26,844 Found link https://files.pythonhosted.org/packages/d1/bd/64c3331f416dda32d38ca8f4c232926d0e8b2fd1ddf9c7827dd2036c19a9/genomedata-0.1.5.tar.gz (from https://pypi.org/simple/genomedata/), version: 0.1.5 2023-09-27T07:30:26,845 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/ee/e2/c888d35113765be0c1083eebe734a4b743741c9eeb758ba1ceae4be03965/genomedata-0.1.6-py2.5.egg (from https://pypi.org/simple/genomedata/) 2023-09-27T07:30:26,845 Found link https://files.pythonhosted.org/packages/db/3c/3a9f9441a2d9b07eaf46a3bc8592fc5c00705ab047fff6d1bf83738187c2/genomedata-0.1.6.tar.gz (from https://pypi.org/simple/genomedata/), version: 0.1.6 2023-09-27T07:30:26,846 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/e6/50/9278c9bb1197cf4890aba00e2694452b9543009717d6ef0b7a0abc331f73/genomedata-1.0.0-py2.5.egg (from https://pypi.org/simple/genomedata/) 2023-09-27T07:30:26,847 Found link https://files.pythonhosted.org/packages/53/7b/952cb445c3f19ff3fcc5858d1aadd6b7f2a2bf1aedaf3c69f09384008bc7/genomedata-1.0.0.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.0.0 2023-09-27T07:30:26,847 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/e3/e5/715b60d2ccd6e1b09dc00013885ddc91d0d00a13abba13d0b4ae5d0e655f/genomedata-1.0.1-py2.5.egg (from https://pypi.org/simple/genomedata/) 2023-09-27T07:30:26,848 Found link https://files.pythonhosted.org/packages/ca/6f/029e8fa74efe34958ab94c1dbe09693a16f0dbd3ff9277a26c1e2e4bc06d/genomedata-1.0.1.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.0.1 2023-09-27T07:30:26,849 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/02/23/b7f1ae2c30e6c8aa9a53205a090851feea5a09298a268d6aa4315b60068b/genomedata-1.1.0-py2.5.egg (from https://pypi.org/simple/genomedata/) 2023-09-27T07:30:26,849 Found link https://files.pythonhosted.org/packages/d3/a5/276928eb1ede8c99467d8dabb75498304a2262e030fea4b8bd217f0c047a/genomedata-1.1.0.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.1.0 2023-09-27T07:30:26,850 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/3c/3a/186c602e584cfc0c76b13b0bcf554e82648aae6f8e0a6836df258ea23418/genomedata-1.1.1-py2.5.egg (from https://pypi.org/simple/genomedata/) 2023-09-27T07:30:26,851 Found link https://files.pythonhosted.org/packages/41/be/56ca09d389d8fa4406dde7a9b32d9953fb9ba78d02e0fc640b4946503696/genomedata-1.1.1.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.1.1 2023-09-27T07:30:26,851 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/cb/15/eccac8c39dcd9c48dafd5a8ad77f77e88a2707e527eb765df112ecd59f3b/genomedata-1.2.0-py2.5.egg (from https://pypi.org/simple/genomedata/) 2023-09-27T07:30:26,852 Found link https://files.pythonhosted.org/packages/ee/b4/9f05a26671745bf9bb0c657b65eb3c6973a5adea7c8172c40efcd7bee6d8/genomedata-1.2.0.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.2.0 2023-09-27T07:30:26,853 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/93/5c/7a96b02d1a0d7c33b43710d321371d3fd748059ae98d57c07863944f0b2b/genomedata-1.2.1-py2.5.egg (from https://pypi.org/simple/genomedata/) 2023-09-27T07:30:26,853 Found link https://files.pythonhosted.org/packages/84/4d/75af402b72884de9a8f4a7b04bc2ecf367c00286fac827f83ff840f926b6/genomedata-1.2.1.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.2.1 2023-09-27T07:30:26,854 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/9a/f8/fe1ea521ccf7bed51cbc506eee09bde20cd7a13be074a66bf260c9ca00c2/genomedata-1.2.2-py2.5.egg (from https://pypi.org/simple/genomedata/) 2023-09-27T07:30:26,854 Found link https://files.pythonhosted.org/packages/29/2f/2daf3f2c913c2427c5f72f8bc6daa800ddb6854d923488ec03b05096ace6/genomedata-1.2.2.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.2.2 2023-09-27T07:30:26,855 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/9d/5f/10e8c1950fb2444d9977d8e063b088e23e027264b8060b671a76b371e6c2/genomedata-1.3.2-py2.7.egg (from https://pypi.org/simple/genomedata/) 2023-09-27T07:30:26,855 Found link https://files.pythonhosted.org/packages/c2/ff/01de9d35322f254787541ae050d6805dda9bb6d57fbfd57a1f0ce1996405/genomedata-1.3.2.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.3.2 2023-09-27T07:30:26,856 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/5d/e7/b8880f2b7c14186cd3c608dd2164ed854624899458bad7ed2a5ffe73a41d/genomedata-1.3.3-py2.7.egg (from https://pypi.org/simple/genomedata/) 2023-09-27T07:30:26,856 Found link https://files.pythonhosted.org/packages/8a/fe/6589545018763ed382eef6206bbedd924100d9b3795ad63b982f1accb030/genomedata-1.3.3.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.3.3 2023-09-27T07:30:26,857 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/f9/60/7a38a31a5f456347baad86b9fc3ff72573b974711bee55be7fb571209991/genomedata-1.3.4-py2.7.egg (from https://pypi.org/simple/genomedata/) 2023-09-27T07:30:26,857 Found link https://files.pythonhosted.org/packages/97/2c/ed8252cf78fed9a0b83bcc3e5ad203502994e1ee4498d9323eb06a37c76e/genomedata-1.3.4.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.3.4 2023-09-27T07:30:26,858 Found link https://files.pythonhosted.org/packages/ae/c8/504b3674a150128e61f5cd075900cc2139e0ac48dabdb70ddf314fbe8424/genomedata-1.3.5.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.3.5 2023-09-27T07:30:26,858 Found link https://files.pythonhosted.org/packages/cd/3a/a466d62a79ccc0926f32c9998f712c14140a0593fc9a487504b202dd18bd/genomedata-1.3.6.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.3.6 2023-09-27T07:30:26,859 Found link https://files.pythonhosted.org/packages/8d/ab/60c0ba4affa11f2b2a413aa39956bc79707ef6b6fa9b9712e2d1d412442b/genomedata-1.4.0.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.4.0 2023-09-27T07:30:26,859 Found link https://files.pythonhosted.org/packages/53/1f/2e267e7607ac3a8e85e79238139fc4c0aa66c714ec2c51ed30422790ca45/genomedata-1.4.1.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.4.1 2023-09-27T07:30:26,860 Found link https://files.pythonhosted.org/packages/52/e0/c22e9b44a897472cf7c315d41ca50b1454ea7e650cda88326f55682ac328/genomedata-1.4.2.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.4.2 2023-09-27T07:30:26,861 Found link https://files.pythonhosted.org/packages/a4/fb/5f226c2d1a7b0c30155ef1bc766a57a37b679638eca9b03af587c266932d/genomedata-1.4.3.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.4.3 2023-09-27T07:30:26,861 Found link https://files.pythonhosted.org/packages/ae/a8/095d15019a28d370b0f81a5adb289828dee17b5ac5e069518024526996f6/genomedata-1.4.4.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.4.4 2023-09-27T07:30:26,862 Found link https://files.pythonhosted.org/packages/3b/a2/690e07a7b11ae2f1892f8858a19b725e7477e801da69074eb84fdee664f2/genomedata-1.5.0.tar.gz (from https://pypi.org/simple/genomedata/), version: 1.5.0 2023-09-27T07:30:26,862 Skipping link: No binaries permitted for genomedata: https://files.pythonhosted.org/packages/83/d3/e0d08c4c6d9b81a8f2de3d31004fd175e1adf8b7bdd1dfa97181559b6785/genomedata-1.6.0-cp37-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/genomedata/) (requires-python:>=3.7) 2023-09-27T07:30:26,863 Found link https://files.pythonhosted.org/packages/c8/3e/5c129fe3741973f82237960de335321215ffdb52fa6408e2a0485e1f8540/genomedata-1.6.0.tar.gz (from https://pypi.org/simple/genomedata/) (requires-python:>=3.7), version: 1.6.0 2023-09-27T07:30:26,864 Skipping link: No binaries permitted for genomedata: https://files.pythonhosted.org/packages/49/95/a93e72f833d33b8172c84ee33755fc7436a5a24fb2d6d5cc1c01d2755d93/genomedata-1.7.0-cp37-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/genomedata/) (requires-python:>=3.7) 2023-09-27T07:30:26,865 Found link https://files.pythonhosted.org/packages/fa/89/7fceac8d18f037b3a9ad34bb0e77f2b50fbac68ae41c2841c3a12ab38abb/genomedata-1.7.0.tar.gz (from https://pypi.org/simple/genomedata/) (requires-python:>=3.7), version: 1.7.0 2023-09-27T07:30:26,865 Skipping link: No binaries permitted for genomedata: https://files.pythonhosted.org/packages/86/8d/978aac04cc015d144c15972a6e975a4796fb5d240d5fc3fbb6578e0815e3/genomedata-1.7.1-cp37-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/genomedata/) (requires-python:>=3.7) 2023-09-27T07:30:26,866 Found link https://files.pythonhosted.org/packages/af/5a/0861b58738df9806ddcdd0cbf980b5e6f79f0d1ea9a5950d792f2b21472e/genomedata-1.7.1.tar.gz (from https://pypi.org/simple/genomedata/) (requires-python:>=3.7), version: 1.7.1 2023-09-27T07:30:26,867 Fetching project page and analyzing links: https://www.piwheels.org/simple/genomedata/ 2023-09-27T07:30:26,868 Getting page https://www.piwheels.org/simple/genomedata/ 2023-09-27T07:30:26,869 Found index url https://www.piwheels.org/simple/ 2023-09-27T07:30:27,036 Fetched page https://www.piwheels.org/simple/genomedata/ as text/html 2023-09-27T07:30:27,039 Skipping link: No binaries permitted for genomedata: https://www.piwheels.org/simple/genomedata/genomedata-1.7.1-cp37-abi3-linux_armv7l.whl#sha256=19a97915678858ee143c59bcd94f65e1e58bea4dc1f34fde8c360054f42d93e0 (from https://www.piwheels.org/simple/genomedata/) (requires-python:>=3.7) 2023-09-27T07:30:27,040 Skipping link: No binaries permitted for genomedata: https://www.piwheels.org/simple/genomedata/genomedata-1.7.1-cp37-abi3-linux_armv6l.whl#sha256=19a97915678858ee143c59bcd94f65e1e58bea4dc1f34fde8c360054f42d93e0 (from https://www.piwheels.org/simple/genomedata/) (requires-python:>=3.7) 2023-09-27T07:30:27,041 Skipping link: No binaries permitted for genomedata: https://www.piwheels.org/simple/genomedata/genomedata-1.7.0-cp37-abi3-linux_armv7l.whl#sha256=967a81218dd10eb1de7b151261dd570fa5a75f2b7c47f1c798e75e003dd3ff84 (from https://www.piwheels.org/simple/genomedata/) (requires-python:>=3.7) 2023-09-27T07:30:27,041 Skipping link: No binaries permitted for genomedata: https://www.piwheels.org/simple/genomedata/genomedata-1.7.0-cp37-abi3-linux_armv6l.whl#sha256=967a81218dd10eb1de7b151261dd570fa5a75f2b7c47f1c798e75e003dd3ff84 (from https://www.piwheels.org/simple/genomedata/) (requires-python:>=3.7) 2023-09-27T07:30:27,042 Skipping link: No binaries permitted for genomedata: https://www.piwheels.org/simple/genomedata/genomedata-1.6.0-cp37-abi3-linux_armv7l.whl#sha256=1dfaaa9f1910becb35328b88cf4ea1866bfb0efb37d60b0078b1d0cb7247f345 (from https://www.piwheels.org/simple/genomedata/) (requires-python:>=3.7) 2023-09-27T07:30:27,042 Skipping link: No binaries permitted for genomedata: https://www.piwheels.org/simple/genomedata/genomedata-1.6.0-cp37-abi3-linux_armv6l.whl#sha256=1dfaaa9f1910becb35328b88cf4ea1866bfb0efb37d60b0078b1d0cb7247f345 (from https://www.piwheels.org/simple/genomedata/) (requires-python:>=3.7) 2023-09-27T07:30:27,043 Skipping link: No binaries permitted for genomedata: https://www.piwheels.org/simple/genomedata/genomedata-1.5.0-py3-none-any.whl#sha256=52913a08eca7171a79a79fb59e558dd3deb2ecfbedd3719f7e79823d6c16e8de (from https://www.piwheels.org/simple/genomedata/) 2023-09-27T07:30:27,043 Skipping link: No binaries permitted for genomedata: https://www.piwheels.org/simple/genomedata/genomedata-1.4.4-py3-none-any.whl#sha256=947997fc388a1793e361a08e235f4dc03b882243eeae4727b245a5b3a49ae466 (from https://www.piwheels.org/simple/genomedata/) 2023-09-27T07:30:27,044 Skipping link: not a file: https://www.piwheels.org/simple/genomedata/ 2023-09-27T07:30:27,044 Skipping link: not a file: https://pypi.org/simple/genomedata/ 2023-09-27T07:30:27,065 Given no hashes to check 1 links for project 'genomedata': discarding no candidates 2023-09-27T07:30:27,083 Collecting genomedata==1.7.1 2023-09-27T07:30:27,086 Created temporary directory: /tmp/pip-unpack-4iflmyqb 2023-09-27T07:30:27,311 Downloading genomedata-1.7.1.tar.gz (1.9 MB) 2023-09-27T07:30:28,008 Added genomedata==1.7.1 from https://files.pythonhosted.org/packages/af/5a/0861b58738df9806ddcdd0cbf980b5e6f79f0d1ea9a5950d792f2b21472e/genomedata-1.7.1.tar.gz to build tracker '/tmp/pip-build-tracker-3_8lbsxa' 2023-09-27T07:30:28,014 Created temporary directory: /tmp/pip-build-env-pgj4_k50 2023-09-27T07:30:28,018 Installing build dependencies: started 2023-09-27T07:30:28,019 Running command pip subprocess to install build dependencies 2023-09-27T07:30:29,150 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-09-27T07:30:29,660 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-27T07:30:31,222 Collecting setuptools 2023-09-27T07:30:31,223 Obtaining dependency information for setuptools from https://files.pythonhosted.org/packages/bb/26/7945080113158354380a12ce26873dd6c1ebd88d47f5bc24e2c5bb38c16a/setuptools-68.2.2-py3-none-any.whl.metadata 2023-09-27T07:30:31,230 Using cached setuptools-68.2.2-py3-none-any.whl.metadata (6.3 kB) 2023-09-27T07:30:31,522 Collecting setuptools-scm 2023-09-27T07:30:31,523 Obtaining dependency information for setuptools-scm from https://files.pythonhosted.org/packages/ca/04/4ea91c627355ae6d976bf7f1fc2815372a96b1b87bf290c8d726d10a08a1/setuptools_scm-8.0.3-py3-none-any.whl.metadata 2023-09-27T07:30:31,530 Using cached setuptools_scm-8.0.3-py3-none-any.whl.metadata (6.1 kB) 2023-09-27T07:30:31,873 Collecting packaging>=20 (from setuptools-scm) 2023-09-27T07:30:31,889 Using cached https://www.piwheels.org/simple/packaging/packaging-23.1-py3-none-any.whl (48 kB) 2023-09-27T07:30:31,921 Using cached setuptools-68.2.2-py3-none-any.whl (807 kB) 2023-09-27T07:30:31,948 Using cached setuptools_scm-8.0.3-py3-none-any.whl (41 kB) 2023-09-27T07:30:34,423 Installing collected packages: setuptools, packaging, setuptools-scm 2023-09-27T07:30:36,989 Successfully installed packaging-23.1 setuptools-68.2.2 setuptools-scm-8.0.3 2023-09-27T07:30:37,585 Installing build dependencies: finished with status 'done' 2023-09-27T07:30:37,589 Getting requirements to build wheel: started 2023-09-27T07:30:37,590 Running command Getting requirements to build wheel 2023-09-27T07:30:38,476 running egg_info 2023-09-27T07:30:38,481 writing genomedata.egg-info/PKG-INFO 2023-09-27T07:30:38,484 writing dependency_links to genomedata.egg-info/dependency_links.txt 2023-09-27T07:30:38,487 writing entry points to genomedata.egg-info/entry_points.txt 2023-09-27T07:30:38,488 writing requirements to genomedata.egg-info/requires.txt 2023-09-27T07:30:38,489 writing top-level names to genomedata.egg-info/top_level.txt 2023-09-27T07:30:38,529 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2023-09-27T07:30:38,533 reading manifest file 'genomedata.egg-info/SOURCES.txt' 2023-09-27T07:30:38,563 reading manifest template 'MANIFEST.in' 2023-09-27T07:30:38,564 no previously-included directories found matching 'Docker' 2023-09-27T07:30:38,565 no previously-included directories found matching '.github' 2023-09-27T07:30:38,566 warning: no previously-included files found matching '.gitignore' 2023-09-27T07:30:38,567 warning: no previously-included files found matching '.readthedocs.yml' 2023-09-27T07:30:38,568 warning: no previously-included files found matching 'environment.yml' 2023-09-27T07:30:38,568 adding license file 'LICENSE' 2023-09-27T07:30:38,576 writing manifest file 'genomedata.egg-info/SOURCES.txt' 2023-09-27T07:30:38,693 Getting requirements to build wheel: finished with status 'done' 2023-09-27T07:30:38,704 Installing backend dependencies: started 2023-09-27T07:30:38,705 Running command pip subprocess to install backend dependencies 2023-09-27T07:30:39,857 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-09-27T07:30:40,373 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-27T07:30:40,873 Collecting wheel 2023-09-27T07:30:40,890 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB) 2023-09-27T07:30:43,093 Installing collected packages: wheel 2023-09-27T07:30:43,317 Creating /tmp/pip-build-env-pgj4_k50/normal/local/bin 2023-09-27T07:30:43,319 changing mode of /tmp/pip-build-env-pgj4_k50/normal/local/bin/wheel to 755 2023-09-27T07:30:43,330 Successfully installed wheel-0.41.2 2023-09-27T07:30:43,868 Installing backend dependencies: finished with status 'done' 2023-09-27T07:30:43,870 Created temporary directory: /tmp/pip-modern-metadata-v920q0dw 2023-09-27T07:30:43,872 Preparing metadata (pyproject.toml): started 2023-09-27T07:30:43,873 Running command Preparing metadata (pyproject.toml) 2023-09-27T07:30:44,979 running dist_info 2023-09-27T07:30:44,985 creating /tmp/pip-modern-metadata-v920q0dw/genomedata.egg-info 2023-09-27T07:30:44,990 writing /tmp/pip-modern-metadata-v920q0dw/genomedata.egg-info/PKG-INFO 2023-09-27T07:30:44,993 writing dependency_links to /tmp/pip-modern-metadata-v920q0dw/genomedata.egg-info/dependency_links.txt 2023-09-27T07:30:44,996 writing entry points to /tmp/pip-modern-metadata-v920q0dw/genomedata.egg-info/entry_points.txt 2023-09-27T07:30:44,997 writing requirements to /tmp/pip-modern-metadata-v920q0dw/genomedata.egg-info/requires.txt 2023-09-27T07:30:44,998 writing top-level names to /tmp/pip-modern-metadata-v920q0dw/genomedata.egg-info/top_level.txt 2023-09-27T07:30:45,000 writing manifest file '/tmp/pip-modern-metadata-v920q0dw/genomedata.egg-info/SOURCES.txt' 2023-09-27T07:30:45,043 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2023-09-27T07:30:45,046 reading manifest file '/tmp/pip-modern-metadata-v920q0dw/genomedata.egg-info/SOURCES.txt' 2023-09-27T07:30:45,049 reading manifest template 'MANIFEST.in' 2023-09-27T07:30:45,050 no previously-included directories found matching 'Docker' 2023-09-27T07:30:45,051 no previously-included directories found matching '.github' 2023-09-27T07:30:45,051 warning: no previously-included files found matching '.gitignore' 2023-09-27T07:30:45,052 warning: no previously-included files found matching '.readthedocs.yml' 2023-09-27T07:30:45,053 warning: no previously-included files found matching 'environment.yml' 2023-09-27T07:30:45,054 adding license file 'LICENSE' 2023-09-27T07:30:45,056 writing manifest file '/tmp/pip-modern-metadata-v920q0dw/genomedata.egg-info/SOURCES.txt' 2023-09-27T07:30:45,057 creating '/tmp/pip-modern-metadata-v920q0dw/genomedata-1.7.1.dist-info' 2023-09-27T07:30:45,221 Preparing metadata (pyproject.toml): finished with status 'done' 2023-09-27T07:30:45,225 Source in /tmp/pip-wheel-sw6ozdtu/genomedata_1b3d614a3c8b411e9db262109ba88c68 has version 1.7.1, which satisfies requirement genomedata==1.7.1 from https://files.pythonhosted.org/packages/af/5a/0861b58738df9806ddcdd0cbf980b5e6f79f0d1ea9a5950d792f2b21472e/genomedata-1.7.1.tar.gz 2023-09-27T07:30:45,226 Removed genomedata==1.7.1 from https://files.pythonhosted.org/packages/af/5a/0861b58738df9806ddcdd0cbf980b5e6f79f0d1ea9a5950d792f2b21472e/genomedata-1.7.1.tar.gz from build tracker '/tmp/pip-build-tracker-3_8lbsxa' 2023-09-27T07:30:45,231 Created temporary directory: /tmp/pip-unpack-rgwaw21b 2023-09-27T07:30:45,232 Created temporary directory: /tmp/pip-unpack-0h1a2fdz 2023-09-27T07:30:45,241 Building wheels for collected packages: genomedata 2023-09-27T07:30:45,245 Created temporary directory: /tmp/pip-wheel-861pu7zz 2023-09-27T07:30:45,245 Destination directory: /tmp/pip-wheel-861pu7zz 2023-09-27T07:30:45,248 Building wheel for genomedata (pyproject.toml): started 2023-09-27T07:30:45,249 Running command Building wheel for genomedata (pyproject.toml) 2023-09-27T07:30:46,059 running bdist_wheel 2023-09-27T07:30:46,080 running build 2023-09-27T07:30:46,081 running build_py 2023-09-27T07:30:46,087 creating build 2023-09-27T07:30:46,087 creating build/lib.linux-armv7l-cpython-311 2023-09-27T07:30:46,088 creating build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T07:30:46,089 copying genomedata/_query.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T07:30:46,091 copying genomedata/_close_data.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T07:30:46,093 copying genomedata/_hardmask.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T07:30:46,096 copying genomedata/_histogram.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T07:30:46,098 copying genomedata/_util.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T07:30:46,099 copying genomedata/_erase_data.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T07:30:46,101 copying genomedata/_chromosome.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T07:30:46,104 copying genomedata/_info.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T07:30:46,105 copying genomedata/_bigwig.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T07:30:46,107 copying genomedata/load_genomedata.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T07:30:46,110 copying genomedata/_hardmask_parsers.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T07:30:46,112 copying genomedata/__init__.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T07:30:46,114 copying genomedata/_open_data.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T07:30:46,116 copying genomedata/_report.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T07:30:46,117 copying genomedata/_load_seq.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T07:30:46,120 copying genomedata/_hdf5.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T07:30:46,123 copying genomedata/_load_data.py -> build/lib.linux-armv7l-cpython-311/genomedata 2023-09-27T07:30:46,125 running egg_info 2023-09-27T07:30:46,130 writing genomedata.egg-info/PKG-INFO 2023-09-27T07:30:46,132 writing dependency_links to genomedata.egg-info/dependency_links.txt 2023-09-27T07:30:46,134 writing entry points to genomedata.egg-info/entry_points.txt 2023-09-27T07:30:46,136 writing requirements to genomedata.egg-info/requires.txt 2023-09-27T07:30:46,137 writing top-level names to genomedata.egg-info/top_level.txt 2023-09-27T07:30:46,161 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2023-09-27T07:30:46,164 reading manifest file 'genomedata.egg-info/SOURCES.txt' 2023-09-27T07:30:46,191 reading manifest template 'MANIFEST.in' 2023-09-27T07:30:46,192 no previously-included directories found matching 'Docker' 2023-09-27T07:30:46,193 no previously-included directories found matching '.github' 2023-09-27T07:30:46,194 warning: no previously-included files found matching '.gitignore' 2023-09-27T07:30:46,194 warning: no previously-included files found matching '.readthedocs.yml' 2023-09-27T07:30:46,195 warning: no previously-included files found matching 'environment.yml' 2023-09-27T07:30:46,196 adding license file 'LICENSE' 2023-09-27T07:30:46,203 writing manifest file 'genomedata.egg-info/SOURCES.txt' 2023-09-27T07:30:46,210 running build_ext 2023-09-27T07:30:46,215 building '_c_load_data' extension 2023-09-27T07:30:46,216 creating build/temp.linux-armv7l-cpython-311 2023-09-27T07:30:46,216 creating build/temp.linux-armv7l-cpython-311/src 2023-09-27T07:30:46,217 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DPy_LIMITED_API=0x03070000 -I/usr/include -I/usr/include/hdf5/serial -I/usr/include/python3.11 -c src/_c_load_data.c -o build/temp.linux-armv7l-cpython-311/src/_c_load_data.o 2023-09-27T07:30:46,591 src/_c_load_data.c: In function ‘load_data_from_stdin’: 2023-09-27T07:30:46,592 src/_c_load_data.c:132:13: warning: passing argument 1 of ‘load_data’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 2023-09-27T07:30:46,593 132 | load_data(gdfilename, trackname, (bool)verbose); 2023-09-27T07:30:46,593 | ^~~~~~~~~~ 2023-09-27T07:30:46,594 src/_c_load_data.c:122:22: note: expected ‘char *’ but argument is of type ‘const char *’ 2023-09-27T07:30:46,595 122 | void load_data(char* gdfilename, char* trackname, bool verbose); 2023-09-27T07:30:46,595 | ~~~~~~^~~~~~~~~~ 2023-09-27T07:30:46,596 src/_c_load_data.c:132:25: warning: passing argument 2 of ‘load_data’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 2023-09-27T07:30:46,596 132 | load_data(gdfilename, trackname, (bool)verbose); 2023-09-27T07:30:46,597 | ^~~~~~~~~ 2023-09-27T07:30:46,597 src/_c_load_data.c:122:40: note: expected ‘char *’ but argument is of type ‘const char *’ 2023-09-27T07:30:46,598 122 | void load_data(char* gdfilename, char* trackname, bool verbose); 2023-09-27T07:30:46,599 | ~~~~~~^~~~~~~~~ 2023-09-27T07:30:47,834 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/_c_load_data.o -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -L/usr/lib/arm-linux-gnueabihf -lhdf5 -lm -lz -o build/lib.linux-armv7l-cpython-311/genomedata/_c_load_data.abi3.so 2023-09-27T07:30:48,040 installing to build/bdist.linux-armv7l/wheel 2023-09-27T07:30:48,041 running install 2023-09-27T07:30:48,065 running install_lib 2023-09-27T07:30:48,070 creating build/bdist.linux-armv7l 2023-09-27T07:30:48,071 creating build/bdist.linux-armv7l/wheel 2023-09-27T07:30:48,072 creating build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T07:30:48,073 copying build/lib.linux-armv7l-cpython-311/genomedata/_query.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T07:30:48,076 copying build/lib.linux-armv7l-cpython-311/genomedata/_close_data.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T07:30:48,078 copying build/lib.linux-armv7l-cpython-311/genomedata/_hardmask.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T07:30:48,081 copying build/lib.linux-armv7l-cpython-311/genomedata/_histogram.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T07:30:48,082 copying build/lib.linux-armv7l-cpython-311/genomedata/_util.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T07:30:48,084 copying build/lib.linux-armv7l-cpython-311/genomedata/_erase_data.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T07:30:48,086 copying build/lib.linux-armv7l-cpython-311/genomedata/_chromosome.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T07:30:48,089 copying build/lib.linux-armv7l-cpython-311/genomedata/_info.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T07:30:48,091 copying build/lib.linux-armv7l-cpython-311/genomedata/_bigwig.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T07:30:48,093 copying build/lib.linux-armv7l-cpython-311/genomedata/load_genomedata.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T07:30:48,095 copying build/lib.linux-armv7l-cpython-311/genomedata/_hardmask_parsers.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T07:30:48,097 copying build/lib.linux-armv7l-cpython-311/genomedata/_c_load_data.abi3.so -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T07:30:48,100 copying build/lib.linux-armv7l-cpython-311/genomedata/__init__.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T07:30:48,103 copying build/lib.linux-armv7l-cpython-311/genomedata/_open_data.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T07:30:48,104 copying build/lib.linux-armv7l-cpython-311/genomedata/_report.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T07:30:48,106 copying build/lib.linux-armv7l-cpython-311/genomedata/_load_seq.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T07:30:48,108 copying build/lib.linux-armv7l-cpython-311/genomedata/_hdf5.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T07:30:48,111 copying build/lib.linux-armv7l-cpython-311/genomedata/_load_data.py -> build/bdist.linux-armv7l/wheel/genomedata 2023-09-27T07:30:48,113 running install_egg_info 2023-09-27T07:30:48,118 Copying genomedata.egg-info to build/bdist.linux-armv7l/wheel/genomedata-1.7.1-py3.11.egg-info 2023-09-27T07:30:48,129 running install_scripts 2023-09-27T07:30:48,181 creating build/bdist.linux-armv7l/wheel/genomedata-1.7.1.dist-info/WHEEL 2023-09-27T07:30:48,183 creating '/tmp/pip-wheel-861pu7zz/.tmp-epftdnhi/genomedata-1.7.1-cp37-abi3-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-09-27T07:30:48,186 adding 'genomedata/__init__.py' 2023-09-27T07:30:48,189 adding 'genomedata/_bigwig.py' 2023-09-27T07:30:48,211 adding 'genomedata/_c_load_data.abi3.so' 2023-09-27T07:30:48,219 adding 'genomedata/_chromosome.py' 2023-09-27T07:30:48,223 adding 'genomedata/_close_data.py' 2023-09-27T07:30:48,225 adding 'genomedata/_erase_data.py' 2023-09-27T07:30:48,227 adding 'genomedata/_hardmask.py' 2023-09-27T07:30:48,230 adding 'genomedata/_hardmask_parsers.py' 2023-09-27T07:30:48,233 adding 'genomedata/_hdf5.py' 2023-09-27T07:30:48,235 adding 'genomedata/_histogram.py' 2023-09-27T07:30:48,237 adding 'genomedata/_info.py' 2023-09-27T07:30:48,239 adding 'genomedata/_load_data.py' 2023-09-27T07:30:48,243 adding 'genomedata/_load_seq.py' 2023-09-27T07:30:48,245 adding 'genomedata/_open_data.py' 2023-09-27T07:30:48,246 adding 'genomedata/_query.py' 2023-09-27T07:30:48,248 adding 'genomedata/_report.py' 2023-09-27T07:30:48,250 adding 'genomedata/_util.py' 2023-09-27T07:30:48,253 adding 'genomedata/load_genomedata.py' 2023-09-27T07:30:48,259 adding 'genomedata-1.7.1.dist-info/LICENSE' 2023-09-27T07:30:48,261 adding 'genomedata-1.7.1.dist-info/METADATA' 2023-09-27T07:30:48,262 adding 'genomedata-1.7.1.dist-info/WHEEL' 2023-09-27T07:30:48,263 adding 'genomedata-1.7.1.dist-info/entry_points.txt' 2023-09-27T07:30:48,265 adding 'genomedata-1.7.1.dist-info/top_level.txt' 2023-09-27T07:30:48,266 adding 'genomedata-1.7.1.dist-info/RECORD' 2023-09-27T07:30:48,269 removing build/bdist.linux-armv7l/wheel 2023-09-27T07:30:48,405 Building wheel for genomedata (pyproject.toml): finished with status 'done' 2023-09-27T07:30:48,412 Created wheel for genomedata: filename=genomedata-1.7.1-cp37-abi3-linux_armv7l.whl size=91400 sha256=50c9111b17f2e3ac9af8f894e1c3017723c0f42963964727855d5403959b29a9 2023-09-27T07:30:48,414 Stored in directory: /tmp/pip-ephem-wheel-cache-lfk9atq3/wheels/e7/e4/48/f3c995230377373e1122f792a2e86768b1f4fc28777fb47f06 2023-09-27T07:30:48,424 Successfully built genomedata 2023-09-27T07:30:48,430 Removed build tracker: '/tmp/pip-build-tracker-3_8lbsxa'