2023-09-28T14:55:20,007 Created temporary directory: /tmp/pip-build-tracker-9w1_a6ej
2023-09-28T14:55:20,008 Initialized build tracking at /tmp/pip-build-tracker-9w1_a6ej
2023-09-28T14:55:20,008 Created build tracker: /tmp/pip-build-tracker-9w1_a6ej
2023-09-28T14:55:20,009 Entered build tracker: /tmp/pip-build-tracker-9w1_a6ej
2023-09-28T14:55:20,010 Created temporary directory: /tmp/pip-wheel-n0yu3t_e
2023-09-28T14:55:20,013 Created temporary directory: /tmp/pip-ephem-wheel-cache-0aub13hk
2023-09-28T14:55:20,034 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-28T14:55:20,038 2 location(s) to search for versions of neurots:
2023-09-28T14:55:20,038 * https://pypi.org/simple/neurots/
2023-09-28T14:55:20,038 * https://www.piwheels.org/simple/neurots/
2023-09-28T14:55:20,038 Fetching project page and analyzing links: https://pypi.org/simple/neurots/
2023-09-28T14:55:20,039 Getting page https://pypi.org/simple/neurots/
2023-09-28T14:55:20,041 Found index url https://pypi.org/simple/
2023-09-28T14:55:20,257 Fetched page https://pypi.org/simple/neurots/ as application/vnd.pypi.simple.v1+json
2023-09-28T14:55:20,261   Found link https://files.pythonhosted.org/packages/d0/80/0ff91cba5c0a5fd60cfb01f995aa6a4c68fd5d3598b8b6b0b02ac866da8a/neurots-0.1.tar.gz (from https://pypi.org/simple/neurots/), version: 0.1
2023-09-28T14:55:20,262   Skipping link: No binaries permitted for neurots: https://files.pythonhosted.org/packages/74/23/d6ba500cc5799c8182e5e8a04c9fe269f1ba980008ecb2276920b726087f/NeuroTS-3.1.0-py3-none-any.whl (from https://pypi.org/simple/neurots/) (requires-python:>=3.8)
2023-09-28T14:55:20,263   Found link https://files.pythonhosted.org/packages/4d/92/cec77983cfdddabc545dd99b13f51dee3bc8dfeea98a3c4cbf70ba68b873/NeuroTS-3.1.0.tar.gz (from https://pypi.org/simple/neurots/) (requires-python:>=3.8), version: 3.1.0
2023-09-28T14:55:20,264   Found link https://files.pythonhosted.org/packages/41/ff/8fc2e84e22bbf397166de3b3690b704766fe22ee046a160b25bbdb7de906/NeuroTS-3.1.1.tar.gz (from https://pypi.org/simple/neurots/) (requires-python:>=3.8), version: 3.1.1
2023-09-28T14:55:20,264   Skipping link: No binaries permitted for neurots: https://files.pythonhosted.org/packages/8a/83/464579b1ba7ed38bc7689a00171486d8e0dc8ca828b40e4ab8051e6128e7/NeuroTS-3.2.0-py3-none-any.whl (from https://pypi.org/simple/neurots/) (requires-python:>=3.8)
2023-09-28T14:55:20,265   Found link https://files.pythonhosted.org/packages/9e/f6/5306a7ba58660bbc37715568ddadace28408db2473a35bf3b76176503cbe/NeuroTS-3.2.0.tar.gz (from https://pypi.org/simple/neurots/) (requires-python:>=3.8), version: 3.2.0
2023-09-28T14:55:20,266   Skipping link: No binaries permitted for neurots: https://files.pythonhosted.org/packages/66/27/fa4e41748b27aedc4a669a9dfcaa78c3ba39a05323d1696a3b49429b3826/NeuroTS-3.3.0-py3-none-any.whl (from https://pypi.org/simple/neurots/) (requires-python:>=3.8)
2023-09-28T14:55:20,267   Found link https://files.pythonhosted.org/packages/da/95/13afc1517c42f4d49c8194c1618a723e6e871ceb4a2b6010c802b3207f12/NeuroTS-3.3.0.tar.gz (from https://pypi.org/simple/neurots/) (requires-python:>=3.8), version: 3.3.0
2023-09-28T14:55:20,268   Skipping link: No binaries permitted for neurots: https://files.pythonhosted.org/packages/8a/27/2359a72565783747b44c92ac3e879d26a3286c67c3052d9d445aaa83e3c1/NeuroTS-3.3.1-py3-none-any.whl (from https://pypi.org/simple/neurots/) (requires-python:>=3.8)
2023-09-28T14:55:20,269   Found link https://files.pythonhosted.org/packages/58/ba/a7d89e31726d54b44402b8b0ab20f5cb6a63c7be91e87482cab346de04c3/NeuroTS-3.3.1.tar.gz (from https://pypi.org/simple/neurots/) (requires-python:>=3.8), version: 3.3.1
2023-09-28T14:55:20,269   Skipping link: No binaries permitted for neurots: https://files.pythonhosted.org/packages/70/55/316d77328f669bc8678b0fa51ec8d5b420e40d2657517ce11216b7ed66aa/NeuroTS-3.3.2-py3-none-any.whl (from https://pypi.org/simple/neurots/) (requires-python:>=3.8)
2023-09-28T14:55:20,270   Found link https://files.pythonhosted.org/packages/f5/ad/575fba2e56a41d0e94ce8f5f0a0bebbb2d2f9faba4d61621522879ae6704/NeuroTS-3.3.2.tar.gz (from https://pypi.org/simple/neurots/) (requires-python:>=3.8), version: 3.3.2
2023-09-28T14:55:20,271   Skipping link: No binaries permitted for neurots: https://files.pythonhosted.org/packages/5c/c7/5780620379ebfb756e5216324c62d394047e3f7cf03bdffb5e9e3f844443/NeuroTS-3.4.0-py3-none-any.whl (from https://pypi.org/simple/neurots/) (requires-python:>=3.8)
2023-09-28T14:55:20,272   Found link https://files.pythonhosted.org/packages/38/68/90a75aa6857dfbeb5ed90f6fd4ca908a456a13d79240d8790e4b34a43fc5/NeuroTS-3.4.0.tar.gz (from https://pypi.org/simple/neurots/) (requires-python:>=3.8), version: 3.4.0
2023-09-28T14:55:20,273   Skipping link: No binaries permitted for neurots: https://files.pythonhosted.org/packages/7a/68/fca0c00ad6a9244d948cc41fd1cf638815c25f1afd7eba3fcfcb53147b17/NeuroTS-3.4.1-py3-none-any.whl (from https://pypi.org/simple/neurots/) (requires-python:>=3.8)
2023-09-28T14:55:20,274   Found link https://files.pythonhosted.org/packages/bd/60/8f8eaf46649ad30383e4fed951c53ccb22d682b92e64d152675092c2c916/NeuroTS-3.4.1.tar.gz (from https://pypi.org/simple/neurots/) (requires-python:>=3.8), version: 3.4.1
2023-09-28T14:55:20,274   Skipping link: No binaries permitted for neurots: https://files.pythonhosted.org/packages/4c/24/b786469a732ec079f6aa81272521fd820b3f89bf5be881235641758e0b6f/NeuroTS-3.4.2-py3-none-any.whl (from https://pypi.org/simple/neurots/) (requires-python:>=3.8)
2023-09-28T14:55:20,275   Found link https://files.pythonhosted.org/packages/14/41/0914cb79116096f88908d59e67e1feb3fb530944b05cd9bae3009656913e/NeuroTS-3.4.2.tar.gz (from https://pypi.org/simple/neurots/) (requires-python:>=3.8), version: 3.4.2
2023-09-28T14:55:20,276 Fetching project page and analyzing links: https://www.piwheels.org/simple/neurots/
2023-09-28T14:55:20,276 Getting page https://www.piwheels.org/simple/neurots/
2023-09-28T14:55:20,278 Found index url https://www.piwheels.org/simple/
2023-09-28T14:55:20,446 Fetched page https://www.piwheels.org/simple/neurots/ as text/html
2023-09-28T14:55:20,450   Skipping link: No binaries permitted for neurots: https://www.piwheels.org/simple/neurots/NeuroTS-3.4.1-py3-none-any.whl#sha256=1c51f191d52f7ea07648d22c147077443e5a01192f6e8379d1619ede845746ae (from https://www.piwheels.org/simple/neurots/) (requires-python:>=3.8)
2023-09-28T14:55:20,450   Skipping link: No binaries permitted for neurots: https://www.piwheels.org/simple/neurots/NeuroTS-3.4.0-py3-none-any.whl#sha256=bc3465a74e57344c06b94e082e2dda5c4d8c31b34f6637744c32423bb6ef31ed (from https://www.piwheels.org/simple/neurots/) (requires-python:>=3.8)
2023-09-28T14:55:20,451   Skipping link: No binaries permitted for neurots: https://www.piwheels.org/simple/neurots/NeuroTS-3.3.2-py3-none-any.whl#sha256=fa8dee2de0a8354937ab4b680c06c70571b5c9e79f928e3e0a9a665f15661442 (from https://www.piwheels.org/simple/neurots/) (requires-python:>=3.8)
2023-09-28T14:55:20,452   Skipping link: No binaries permitted for neurots: https://www.piwheels.org/simple/neurots/NeuroTS-3.3.1-py3-none-any.whl#sha256=e79235baa9c72e9402f75328100109eacf2843cf262dfb3bff816d7c973d36ac (from https://www.piwheels.org/simple/neurots/) (requires-python:>=3.8)
2023-09-28T14:55:20,452   Skipping link: No binaries permitted for neurots: https://www.piwheels.org/simple/neurots/NeuroTS-3.3.0-py3-none-any.whl#sha256=3204a2d15217008e58f512c49fde440ebb0e31160d309f28370687be75a212c4 (from https://www.piwheels.org/simple/neurots/) (requires-python:>=3.8)
2023-09-28T14:55:20,453   Skipping link: No binaries permitted for neurots: https://www.piwheels.org/simple/neurots/NeuroTS-3.2.0-py3-none-any.whl#sha256=69e42ccc87719ea7556f6dd05a0943796b273aa1a0d522bffe714c337d1081b2 (from https://www.piwheels.org/simple/neurots/) (requires-python:>=3.8)
2023-09-28T14:55:20,453   Skipping link: No binaries permitted for neurots: https://www.piwheels.org/simple/neurots/NeuroTS-3.1.1-py3-none-any.whl#sha256=04633dc995b1fb5922d35e27bacd33b672dbe4639a87f944c3681902ab9e1afc (from https://www.piwheels.org/simple/neurots/) (requires-python:>=3.8)
2023-09-28T14:55:20,454   Skipping link: No binaries permitted for neurots: https://www.piwheels.org/simple/neurots/NeuroTS-3.1.0-py3-none-any.whl#sha256=d0597dc1730313a484557d046d2340677e3f7425ca268a601b323b7ba7f38b2f (from https://www.piwheels.org/simple/neurots/) (requires-python:>=3.8)
2023-09-28T14:55:20,454   Skipping link: No binaries permitted for neurots: https://www.piwheels.org/simple/neurots/neurots-0.1-py3-none-any.whl#sha256=a569526207bf4f39eed0305f67c2534c26aeee20ef01cdf68830112c97cc69c5 (from https://www.piwheels.org/simple/neurots/)
2023-09-28T14:55:20,455 Skipping link: not a file: https://www.piwheels.org/simple/neurots/
2023-09-28T14:55:20,456 Skipping link: not a file: https://pypi.org/simple/neurots/
2023-09-28T14:55:20,475 Given no hashes to check 1 links for project 'neurots': discarding no candidates
2023-09-28T14:55:20,493 Collecting neurots==3.4.2
2023-09-28T14:55:20,496   Created temporary directory: /tmp/pip-unpack-3zkwq1n2
2023-09-28T14:55:20,716   Downloading NeuroTS-3.4.2.tar.gz (2.1 MB)
2023-09-28T14:55:21,524   Added neurots==3.4.2 from https://files.pythonhosted.org/packages/14/41/0914cb79116096f88908d59e67e1feb3fb530944b05cd9bae3009656913e/NeuroTS-3.4.2.tar.gz to build tracker '/tmp/pip-build-tracker-9w1_a6ej'
2023-09-28T14:55:21,529   Created temporary directory: /tmp/pip-build-env-p6nydn4t
2023-09-28T14:55:21,534   Installing build dependencies: started
2023-09-28T14:55:21,535   Running command pip subprocess to install build dependencies
2023-09-28T14:55:22,673   Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2023-09-28T14:55:23,176   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-28T14:55:24,746   Collecting setuptools>=45
2023-09-28T14:55:24,818     Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.2.2-py3-none-any.whl (807 kB)
2023-09-28T14:55:25,137   Collecting setuptools_scm[toml]>=6.2
2023-09-28T14:55:25,138     Obtaining dependency information for setuptools_scm[toml]>=6.2 from https://files.pythonhosted.org/packages/ca/04/4ea91c627355ae6d976bf7f1fc2815372a96b1b87bf290c8d726d10a08a1/setuptools_scm-8.0.3-py3-none-any.whl.metadata
2023-09-28T14:55:25,144     Using cached setuptools_scm-8.0.3-py3-none-any.whl.metadata (6.1 kB)
2023-09-28T14:55:25,498   Collecting packaging>=20 (from setuptools_scm[toml]>=6.2)
2023-09-28T14:55:25,531     Using cached https://www.piwheels.org/simple/packaging/packaging-23.1-py3-none-any.whl (48 kB)
2023-09-28T14:55:25,596   Using cached setuptools_scm-8.0.3-py3-none-any.whl (41 kB)
2023-09-28T14:55:30,411   Installing collected packages: setuptools, packaging, setuptools_scm
2023-09-28T14:55:34,206   Successfully installed packaging-23.1 setuptools-68.2.2 setuptools_scm-8.0.3
2023-09-28T14:55:34,793   Installing build dependencies: finished with status 'done'
2023-09-28T14:55:34,797   Getting requirements to build wheel: started
2023-09-28T14:55:34,798   Running command Getting requirements to build wheel
2023-09-28T14:55:35,361   Getting requirements to build wheel: finished with status 'done'
2023-09-28T14:55:35,381   Installing backend dependencies: started
2023-09-28T14:55:35,382   Running command pip subprocess to install backend dependencies
2023-09-28T14:55:37,722   Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2023-09-28T14:55:38,250   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-28T14:55:38,936   Collecting wheel
2023-09-28T14:55:38,958     Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB)
2023-09-28T14:55:41,182   Installing collected packages: wheel
2023-09-28T14:55:41,410     Creating /tmp/pip-build-env-p6nydn4t/normal/local/bin
2023-09-28T14:55:41,412     changing mode of /tmp/pip-build-env-p6nydn4t/normal/local/bin/wheel to 755
2023-09-28T14:55:41,424   Successfully installed wheel-0.41.2
2023-09-28T14:55:41,960   Installing backend dependencies: finished with status 'done'
2023-09-28T14:55:41,961   Created temporary directory: /tmp/pip-modern-metadata-3rl291vw
2023-09-28T14:55:41,964   Preparing metadata (pyproject.toml): started
2023-09-28T14:55:41,965   Running command Preparing metadata (pyproject.toml)
2023-09-28T14:55:42,512   running dist_info
2023-09-28T14:55:42,533   creating /tmp/pip-modern-metadata-3rl291vw/NeuroTS.egg-info
2023-09-28T14:55:42,541   writing /tmp/pip-modern-metadata-3rl291vw/NeuroTS.egg-info/PKG-INFO
2023-09-28T14:55:42,549   writing dependency_links to /tmp/pip-modern-metadata-3rl291vw/NeuroTS.egg-info/dependency_links.txt
2023-09-28T14:55:42,553   writing requirements to /tmp/pip-modern-metadata-3rl291vw/NeuroTS.egg-info/requires.txt
2023-09-28T14:55:42,554   writing top-level names to /tmp/pip-modern-metadata-3rl291vw/NeuroTS.egg-info/top_level.txt
2023-09-28T14:55:42,556   writing manifest file '/tmp/pip-modern-metadata-3rl291vw/NeuroTS.egg-info/SOURCES.txt'
2023-09-28T14:55:42,612   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2023-09-28T14:55:42,615   reading manifest file '/tmp/pip-modern-metadata-3rl291vw/NeuroTS.egg-info/SOURCES.txt'
2023-09-28T14:55:42,617   reading manifest template 'MANIFEST.in'
2023-09-28T14:55:42,620   warning: no previously-included files matching '*.py[co]' found anywhere in distribution
2023-09-28T14:55:42,620   warning: no previously-included files matching '.DS_Store' found anywhere in distribution
2023-09-28T14:55:42,621   adding license file 'LICENSE.txt'
2023-09-28T14:55:42,621   adding license file 'AUTHORS.md'
2023-09-28T14:55:42,624   writing manifest file '/tmp/pip-modern-metadata-3rl291vw/NeuroTS.egg-info/SOURCES.txt'
2023-09-28T14:55:42,625   creating '/tmp/pip-modern-metadata-3rl291vw/NeuroTS-3.4.2.dist-info'
2023-09-28T14:55:42,817   Preparing metadata (pyproject.toml): finished with status 'done'
2023-09-28T14:55:42,822   Source in /tmp/pip-wheel-n0yu3t_e/neurots_b8747eafe63e4ad384f0e707d8e18f89 has version 3.4.2, which satisfies requirement neurots==3.4.2 from https://files.pythonhosted.org/packages/14/41/0914cb79116096f88908d59e67e1feb3fb530944b05cd9bae3009656913e/NeuroTS-3.4.2.tar.gz
2023-09-28T14:55:42,823   Removed neurots==3.4.2 from https://files.pythonhosted.org/packages/14/41/0914cb79116096f88908d59e67e1feb3fb530944b05cd9bae3009656913e/NeuroTS-3.4.2.tar.gz from build tracker '/tmp/pip-build-tracker-9w1_a6ej'
2023-09-28T14:55:42,829 Created temporary directory: /tmp/pip-unpack-89k4oxfo
2023-09-28T14:55:42,830 Created temporary directory: /tmp/pip-unpack-x6d1tuzo
2023-09-28T14:55:42,880 Building wheels for collected packages: neurots
2023-09-28T14:55:42,885   Created temporary directory: /tmp/pip-wheel-33cfvzl1
2023-09-28T14:55:42,885   Destination directory: /tmp/pip-wheel-33cfvzl1
2023-09-28T14:55:42,888   Building wheel for neurots (pyproject.toml): started
2023-09-28T14:55:42,889   Running command Building wheel for neurots (pyproject.toml)
2023-09-28T14:55:43,477   running bdist_wheel
2023-09-28T14:55:43,526   running build
2023-09-28T14:55:43,526   running build_py
2023-09-28T14:55:43,535   creating build
2023-09-28T14:55:43,536   creating build/lib
2023-09-28T14:55:43,536   creating build/lib/neurots
2023-09-28T14:55:43,538   copying neurots/validator.py -> build/lib/neurots
2023-09-28T14:55:43,540   copying neurots/basic.py -> build/lib/neurots
2023-09-28T14:55:43,542   copying neurots/__init__.py -> build/lib/neurots
2023-09-28T14:55:43,544   copying neurots/utils.py -> build/lib/neurots
2023-09-28T14:55:43,546   creating build/lib/neurots/generate
2023-09-28T14:55:43,547   copying neurots/generate/tree.py -> build/lib/neurots/generate
2023-09-28T14:55:43,550   copying neurots/generate/__init__.py -> build/lib/neurots/generate
2023-09-28T14:55:43,552   copying neurots/generate/section.py -> build/lib/neurots/generate
2023-09-28T14:55:43,554   copying neurots/generate/soma.py -> build/lib/neurots/generate
2023-09-28T14:55:43,556   copying neurots/generate/grower.py -> build/lib/neurots/generate
2023-09-28T14:55:43,559   copying neurots/generate/diametrizer.py -> build/lib/neurots/generate
2023-09-28T14:55:43,561   copying neurots/generate/orientations.py -> build/lib/neurots/generate
2023-09-28T14:55:43,565   creating build/lib/neurots/preprocess
2023-09-28T14:55:43,566   copying neurots/preprocess/__init__.py -> build/lib/neurots/preprocess
2023-09-28T14:55:43,568   copying neurots/preprocess/preprocessors.py -> build/lib/neurots/preprocess
2023-09-28T14:55:43,570   copying neurots/preprocess/relevance_checkers.py -> build/lib/neurots/preprocess
2023-09-28T14:55:43,572   copying neurots/preprocess/utils.py -> build/lib/neurots/preprocess
2023-09-28T14:55:43,574   copying neurots/preprocess/exceptions.py -> build/lib/neurots/preprocess
2023-09-28T14:55:43,575   copying neurots/preprocess/validity_checkers.py -> build/lib/neurots/preprocess
2023-09-28T14:55:43,578   creating build/lib/neurots/extract_input
2023-09-28T14:55:43,579   copying neurots/extract_input/input_parameters.py -> build/lib/neurots/extract_input
2023-09-28T14:55:43,581   copying neurots/extract_input/input_distributions.py -> build/lib/neurots/extract_input
2023-09-28T14:55:43,583   copying neurots/extract_input/__init__.py -> build/lib/neurots/extract_input
2023-09-28T14:55:43,585   copying neurots/extract_input/from_TMD.py -> build/lib/neurots/extract_input
2023-09-28T14:55:43,587   copying neurots/extract_input/from_neurom.py -> build/lib/neurots/extract_input
2023-09-28T14:55:43,589   copying neurots/extract_input/from_diameter.py -> build/lib/neurots/extract_input
2023-09-28T14:55:43,591   creating build/lib/neurots/morphmath
2023-09-28T14:55:43,592   copying neurots/morphmath/point_array.py -> build/lib/neurots/morphmath
2023-09-28T14:55:43,594   copying neurots/morphmath/rotation.py -> build/lib/neurots/morphmath
2023-09-28T14:55:43,596   copying neurots/morphmath/__init__.py -> build/lib/neurots/morphmath
2023-09-28T14:55:43,598   copying neurots/morphmath/bifurcation.py -> build/lib/neurots/morphmath
2023-09-28T14:55:43,600   copying neurots/morphmath/utils.py -> build/lib/neurots/morphmath
2023-09-28T14:55:43,601   copying neurots/morphmath/sample.py -> build/lib/neurots/morphmath
2023-09-28T14:55:43,604   creating build/lib/neurots/astrocyte
2023-09-28T14:55:43,605   copying neurots/astrocyte/tree.py -> build/lib/neurots/astrocyte
2023-09-28T14:55:43,607   copying neurots/astrocyte/__init__.py -> build/lib/neurots/astrocyte
2023-09-28T14:55:43,609   copying neurots/astrocyte/tmd_utils.py -> build/lib/neurots/astrocyte
2023-09-28T14:55:43,611   copying neurots/astrocyte/section.py -> build/lib/neurots/astrocyte
2023-09-28T14:55:43,613   copying neurots/astrocyte/point_cloud.py -> build/lib/neurots/astrocyte
2023-09-28T14:55:43,615   copying neurots/astrocyte/context.py -> build/lib/neurots/astrocyte
2023-09-28T14:55:43,618   copying neurots/astrocyte/space_colonization.py -> build/lib/neurots/astrocyte
2023-09-28T14:55:43,620   copying neurots/astrocyte/grower.py -> build/lib/neurots/astrocyte
2023-09-28T14:55:43,623   creating build/lib/neurots/generate/algorithms
2023-09-28T14:55:43,624   copying neurots/generate/algorithms/__init__.py -> build/lib/neurots/generate/algorithms
2023-09-28T14:55:43,626   copying neurots/generate/algorithms/common.py -> build/lib/neurots/generate/algorithms
2023-09-28T14:55:43,628   copying neurots/generate/algorithms/basicgrower.py -> build/lib/neurots/generate/algorithms
2023-09-28T14:55:43,630   copying neurots/generate/algorithms/tmdgrower.py -> build/lib/neurots/generate/algorithms
2023-09-28T14:55:43,633   copying neurots/generate/algorithms/barcode.py -> build/lib/neurots/generate/algorithms
2023-09-28T14:55:43,635   copying neurots/generate/algorithms/abstractgrower.py -> build/lib/neurots/generate/algorithms
2023-09-28T14:55:43,636   running egg_info
2023-09-28T14:55:43,642   writing NeuroTS.egg-info/PKG-INFO
2023-09-28T14:55:43,650   writing dependency_links to NeuroTS.egg-info/dependency_links.txt
2023-09-28T14:55:43,654   writing requirements to NeuroTS.egg-info/requires.txt
2023-09-28T14:55:43,656   writing top-level names to NeuroTS.egg-info/top_level.txt
2023-09-28T14:55:43,689   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2023-09-28T14:55:43,692   reading manifest file 'NeuroTS.egg-info/SOURCES.txt'
2023-09-28T14:55:43,711   reading manifest template 'MANIFEST.in'
2023-09-28T14:55:43,713   warning: no previously-included files matching '*.py[co]' found anywhere in distribution
2023-09-28T14:55:43,714   warning: no previously-included files matching '.DS_Store' found anywhere in distribution
2023-09-28T14:55:43,714   adding license file 'LICENSE.txt'
2023-09-28T14:55:43,715   adding license file 'AUTHORS.md'
2023-09-28T14:55:43,722   writing manifest file 'NeuroTS.egg-info/SOURCES.txt'
2023-09-28T14:55:43,728   creating build/lib/neurots/schemas
2023-09-28T14:55:43,728   copying neurots/schemas/distributions.json -> build/lib/neurots/schemas
2023-09-28T14:55:43,731   copying neurots/schemas/parameters.json -> build/lib/neurots/schemas
2023-09-28T14:55:43,749   installing to build/bdist.linux-armv7l/wheel
2023-09-28T14:55:43,750   running install
2023-09-28T14:55:43,774   running install_lib
2023-09-28T14:55:43,781   creating build/bdist.linux-armv7l
2023-09-28T14:55:43,782   creating build/bdist.linux-armv7l/wheel
2023-09-28T14:55:43,784   creating build/bdist.linux-armv7l/wheel/neurots
2023-09-28T14:55:43,785   copying build/lib/neurots/validator.py -> build/bdist.linux-armv7l/wheel/neurots
2023-09-28T14:55:43,787   copying build/lib/neurots/basic.py -> build/bdist.linux-armv7l/wheel/neurots
2023-09-28T14:55:43,789   creating build/bdist.linux-armv7l/wheel/neurots/generate
2023-09-28T14:55:43,790   copying build/lib/neurots/generate/tree.py -> build/bdist.linux-armv7l/wheel/neurots/generate
2023-09-28T14:55:43,793   copying build/lib/neurots/generate/__init__.py -> build/bdist.linux-armv7l/wheel/neurots/generate
2023-09-28T14:55:43,794   copying build/lib/neurots/generate/section.py -> build/bdist.linux-armv7l/wheel/neurots/generate
2023-09-28T14:55:43,797   copying build/lib/neurots/generate/soma.py -> build/bdist.linux-armv7l/wheel/neurots/generate
2023-09-28T14:55:43,800   creating build/bdist.linux-armv7l/wheel/neurots/generate/algorithms
2023-09-28T14:55:43,800   copying build/lib/neurots/generate/algorithms/__init__.py -> build/bdist.linux-armv7l/wheel/neurots/generate/algorithms
2023-09-28T14:55:43,803   copying build/lib/neurots/generate/algorithms/common.py -> build/bdist.linux-armv7l/wheel/neurots/generate/algorithms
2023-09-28T14:55:43,805   copying build/lib/neurots/generate/algorithms/basicgrower.py -> build/bdist.linux-armv7l/wheel/neurots/generate/algorithms
2023-09-28T14:55:43,807   copying build/lib/neurots/generate/algorithms/tmdgrower.py -> build/bdist.linux-armv7l/wheel/neurots/generate/algorithms
2023-09-28T14:55:43,809   copying build/lib/neurots/generate/algorithms/barcode.py -> build/bdist.linux-armv7l/wheel/neurots/generate/algorithms
2023-09-28T14:55:43,811   copying build/lib/neurots/generate/algorithms/abstractgrower.py -> build/bdist.linux-armv7l/wheel/neurots/generate/algorithms
2023-09-28T14:55:43,813   copying build/lib/neurots/generate/grower.py -> build/bdist.linux-armv7l/wheel/neurots/generate
2023-09-28T14:55:43,816   copying build/lib/neurots/generate/diametrizer.py -> build/bdist.linux-armv7l/wheel/neurots/generate
2023-09-28T14:55:43,818   copying build/lib/neurots/generate/orientations.py -> build/bdist.linux-armv7l/wheel/neurots/generate
2023-09-28T14:55:43,821   copying build/lib/neurots/__init__.py -> build/bdist.linux-armv7l/wheel/neurots
2023-09-28T14:55:43,823   creating build/bdist.linux-armv7l/wheel/neurots/preprocess
2023-09-28T14:55:43,824   copying build/lib/neurots/preprocess/__init__.py -> build/bdist.linux-armv7l/wheel/neurots/preprocess
2023-09-28T14:55:43,826   copying build/lib/neurots/preprocess/preprocessors.py -> build/bdist.linux-armv7l/wheel/neurots/preprocess
2023-09-28T14:55:43,828   copying build/lib/neurots/preprocess/relevance_checkers.py -> build/bdist.linux-armv7l/wheel/neurots/preprocess
2023-09-28T14:55:43,830   copying build/lib/neurots/preprocess/utils.py -> build/bdist.linux-armv7l/wheel/neurots/preprocess
2023-09-28T14:55:43,832   copying build/lib/neurots/preprocess/exceptions.py -> build/bdist.linux-armv7l/wheel/neurots/preprocess
2023-09-28T14:55:43,834   copying build/lib/neurots/preprocess/validity_checkers.py -> build/bdist.linux-armv7l/wheel/neurots/preprocess
2023-09-28T14:55:43,836   copying build/lib/neurots/utils.py -> build/bdist.linux-armv7l/wheel/neurots
2023-09-28T14:55:43,838   creating build/bdist.linux-armv7l/wheel/neurots/schemas
2023-09-28T14:55:43,839   copying build/lib/neurots/schemas/distributions.json -> build/bdist.linux-armv7l/wheel/neurots/schemas
2023-09-28T14:55:43,841   copying build/lib/neurots/schemas/parameters.json -> build/bdist.linux-armv7l/wheel/neurots/schemas
2023-09-28T14:55:43,844   creating build/bdist.linux-armv7l/wheel/neurots/extract_input
2023-09-28T14:55:43,845   copying build/lib/neurots/extract_input/input_parameters.py -> build/bdist.linux-armv7l/wheel/neurots/extract_input
2023-09-28T14:55:43,847   copying build/lib/neurots/extract_input/input_distributions.py -> build/bdist.linux-armv7l/wheel/neurots/extract_input
2023-09-28T14:55:43,849   copying build/lib/neurots/extract_input/__init__.py -> build/bdist.linux-armv7l/wheel/neurots/extract_input
2023-09-28T14:55:43,851   copying build/lib/neurots/extract_input/from_TMD.py -> build/bdist.linux-armv7l/wheel/neurots/extract_input
2023-09-28T14:55:43,853   copying build/lib/neurots/extract_input/from_neurom.py -> build/bdist.linux-armv7l/wheel/neurots/extract_input
2023-09-28T14:55:43,855   copying build/lib/neurots/extract_input/from_diameter.py -> build/bdist.linux-armv7l/wheel/neurots/extract_input
2023-09-28T14:55:43,858   creating build/bdist.linux-armv7l/wheel/neurots/morphmath
2023-09-28T14:55:43,858   copying build/lib/neurots/morphmath/point_array.py -> build/bdist.linux-armv7l/wheel/neurots/morphmath
2023-09-28T14:55:43,860   copying build/lib/neurots/morphmath/rotation.py -> build/bdist.linux-armv7l/wheel/neurots/morphmath
2023-09-28T14:55:43,862   copying build/lib/neurots/morphmath/__init__.py -> build/bdist.linux-armv7l/wheel/neurots/morphmath
2023-09-28T14:55:43,864   copying build/lib/neurots/morphmath/bifurcation.py -> build/bdist.linux-armv7l/wheel/neurots/morphmath
2023-09-28T14:55:43,866   copying build/lib/neurots/morphmath/utils.py -> build/bdist.linux-armv7l/wheel/neurots/morphmath
2023-09-28T14:55:43,868   copying build/lib/neurots/morphmath/sample.py -> build/bdist.linux-armv7l/wheel/neurots/morphmath
2023-09-28T14:55:43,870   creating build/bdist.linux-armv7l/wheel/neurots/astrocyte
2023-09-28T14:55:43,871   copying build/lib/neurots/astrocyte/tree.py -> build/bdist.linux-armv7l/wheel/neurots/astrocyte
2023-09-28T14:55:43,873   copying build/lib/neurots/astrocyte/__init__.py -> build/bdist.linux-armv7l/wheel/neurots/astrocyte
2023-09-28T14:55:43,875   copying build/lib/neurots/astrocyte/tmd_utils.py -> build/bdist.linux-armv7l/wheel/neurots/astrocyte
2023-09-28T14:55:43,877   copying build/lib/neurots/astrocyte/section.py -> build/bdist.linux-armv7l/wheel/neurots/astrocyte
2023-09-28T14:55:43,879   copying build/lib/neurots/astrocyte/point_cloud.py -> build/bdist.linux-armv7l/wheel/neurots/astrocyte
2023-09-28T14:55:43,881   copying build/lib/neurots/astrocyte/context.py -> build/bdist.linux-armv7l/wheel/neurots/astrocyte
2023-09-28T14:55:43,883   copying build/lib/neurots/astrocyte/space_colonization.py -> build/bdist.linux-armv7l/wheel/neurots/astrocyte
2023-09-28T14:55:43,886   copying build/lib/neurots/astrocyte/grower.py -> build/bdist.linux-armv7l/wheel/neurots/astrocyte
2023-09-28T14:55:43,888   running install_egg_info
2023-09-28T14:55:43,896   Copying NeuroTS.egg-info to build/bdist.linux-armv7l/wheel/NeuroTS-3.4.2-py3.11.egg-info
2023-09-28T14:55:43,906   running install_scripts
2023-09-28T14:55:43,928   creating build/bdist.linux-armv7l/wheel/NeuroTS-3.4.2.dist-info/WHEEL
2023-09-28T14:55:43,930   creating '/tmp/pip-wheel-33cfvzl1/.tmp-m2q8fge6/NeuroTS-3.4.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-09-28T14:55:43,933   adding 'neurots/__init__.py'
2023-09-28T14:55:43,935   adding 'neurots/basic.py'
2023-09-28T14:55:43,936   adding 'neurots/utils.py'
2023-09-28T14:55:43,938   adding 'neurots/validator.py'
2023-09-28T14:55:43,940   adding 'neurots/astrocyte/__init__.py'
2023-09-28T14:55:43,941   adding 'neurots/astrocyte/context.py'
2023-09-28T14:55:43,943   adding 'neurots/astrocyte/grower.py'
2023-09-28T14:55:43,945   adding 'neurots/astrocyte/point_cloud.py'
2023-09-28T14:55:43,946   adding 'neurots/astrocyte/section.py'
2023-09-28T14:55:43,949   adding 'neurots/astrocyte/space_colonization.py'
2023-09-28T14:55:43,950   adding 'neurots/astrocyte/tmd_utils.py'
2023-09-28T14:55:43,952   adding 'neurots/astrocyte/tree.py'
2023-09-28T14:55:43,953   adding 'neurots/extract_input/__init__.py'
2023-09-28T14:55:43,955   adding 'neurots/extract_input/from_TMD.py'
2023-09-28T14:55:43,956   adding 'neurots/extract_input/from_diameter.py'
2023-09-28T14:55:43,958   adding 'neurots/extract_input/from_neurom.py'
2023-09-28T14:55:43,959   adding 'neurots/extract_input/input_distributions.py'
2023-09-28T14:55:43,961   adding 'neurots/extract_input/input_parameters.py'
2023-09-28T14:55:43,962   adding 'neurots/generate/__init__.py'
2023-09-28T14:55:43,965   adding 'neurots/generate/diametrizer.py'
2023-09-28T14:55:43,967   adding 'neurots/generate/grower.py'
2023-09-28T14:55:43,970   adding 'neurots/generate/orientations.py'
2023-09-28T14:55:43,972   adding 'neurots/generate/section.py'
2023-09-28T14:55:43,974   adding 'neurots/generate/soma.py'
2023-09-28T14:55:43,976   adding 'neurots/generate/tree.py'
2023-09-28T14:55:43,978   adding 'neurots/generate/algorithms/__init__.py'
2023-09-28T14:55:43,979   adding 'neurots/generate/algorithms/abstractgrower.py'
2023-09-28T14:55:43,981   adding 'neurots/generate/algorithms/barcode.py'
2023-09-28T14:55:43,982   adding 'neurots/generate/algorithms/basicgrower.py'
2023-09-28T14:55:43,984   adding 'neurots/generate/algorithms/common.py'
2023-09-28T14:55:43,986   adding 'neurots/generate/algorithms/tmdgrower.py'
2023-09-28T14:55:43,988   adding 'neurots/morphmath/__init__.py'
2023-09-28T14:55:43,989   adding 'neurots/morphmath/bifurcation.py'
2023-09-28T14:55:43,990   adding 'neurots/morphmath/point_array.py'
2023-09-28T14:55:43,992   adding 'neurots/morphmath/rotation.py'
2023-09-28T14:55:43,993   adding 'neurots/morphmath/sample.py'
2023-09-28T14:55:43,995   adding 'neurots/morphmath/utils.py'
2023-09-28T14:55:43,997   adding 'neurots/preprocess/__init__.py'
2023-09-28T14:55:43,998   adding 'neurots/preprocess/exceptions.py'
2023-09-28T14:55:43,999   adding 'neurots/preprocess/preprocessors.py'
2023-09-28T14:55:44,000   adding 'neurots/preprocess/relevance_checkers.py'
2023-09-28T14:55:44,002   adding 'neurots/preprocess/utils.py'
2023-09-28T14:55:44,004   adding 'neurots/preprocess/validity_checkers.py'
2023-09-28T14:55:44,006   adding 'neurots/schemas/distributions.json'
2023-09-28T14:55:44,008   adding 'neurots/schemas/parameters.json'
2023-09-28T14:55:44,009   adding 'NeuroTS-3.4.2.dist-info/AUTHORS.md'
2023-09-28T14:55:44,015   adding 'NeuroTS-3.4.2.dist-info/LICENSE.txt'
2023-09-28T14:55:44,017   adding 'NeuroTS-3.4.2.dist-info/METADATA'
2023-09-28T14:55:44,018   adding 'NeuroTS-3.4.2.dist-info/WHEEL'
2023-09-28T14:55:44,019   adding 'NeuroTS-3.4.2.dist-info/top_level.txt'
2023-09-28T14:55:44,020   adding 'NeuroTS-3.4.2.dist-info/RECORD'
2023-09-28T14:55:44,023   removing build/bdist.linux-armv7l/wheel
2023-09-28T14:55:44,132   Building wheel for neurots (pyproject.toml): finished with status 'done'
2023-09-28T14:55:44,139   Created wheel for neurots: filename=NeuroTS-3.4.2-py3-none-any.whl size=105272 sha256=b6c5ff45e572b7ceff1091c42c18efb94f21c058dd6f781fdc6525a4aba60218
2023-09-28T14:55:44,140   Stored in directory: /tmp/pip-ephem-wheel-cache-0aub13hk/wheels/98/c3/5e/f0e16b048507a6ac9f4688c3895133d6cf02eb31677ee5ad09
2023-09-28T14:55:44,154 Successfully built neurots
2023-09-28T14:55:44,160 Removed build tracker: '/tmp/pip-build-tracker-9w1_a6ej'