2023-09-29T05:16:18,942 Created temporary directory: /tmp/pip-build-tracker-613c1t9_ 2023-09-29T05:16:18,943 Initialized build tracking at /tmp/pip-build-tracker-613c1t9_ 2023-09-29T05:16:18,943 Created build tracker: /tmp/pip-build-tracker-613c1t9_ 2023-09-29T05:16:18,944 Entered build tracker: /tmp/pip-build-tracker-613c1t9_ 2023-09-29T05:16:18,945 Created temporary directory: /tmp/pip-wheel-v5xebi39 2023-09-29T05:16:18,948 Created temporary directory: /tmp/pip-ephem-wheel-cache-fqv5ab9k 2023-09-29T05:16:18,972 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-29T05:16:18,976 2 location(s) to search for versions of calorine: 2023-09-29T05:16:18,976 * https://pypi.org/simple/calorine/ 2023-09-29T05:16:18,976 * https://www.piwheels.org/simple/calorine/ 2023-09-29T05:16:18,977 Fetching project page and analyzing links: https://pypi.org/simple/calorine/ 2023-09-29T05:16:18,977 Getting page https://pypi.org/simple/calorine/ 2023-09-29T05:16:18,979 Found index url https://pypi.org/simple/ 2023-09-29T05:16:19,191 Fetched page https://pypi.org/simple/calorine/ as application/vnd.pypi.simple.v1+json 2023-09-29T05:16:19,194 Found link https://files.pythonhosted.org/packages/12/1b/629c5c5c05ce38726b3cb8123032e930fcf40287f07da6e5e72417eedd18/calorine-1.0.tar.gz (from https://pypi.org/simple/calorine/), version: 1.0 2023-09-29T05:16:19,195 Found link https://files.pythonhosted.org/packages/9f/7c/0d35c626f0a1cf62830b0e9f5b222b6e188c30686415a1a92d568822bac2/calorine-1.1.tar.gz (from https://pypi.org/simple/calorine/), version: 1.1 2023-09-29T05:16:19,196 Found link https://files.pythonhosted.org/packages/9b/2b/5b505aac7fa52c428044a5dc36e19bca7e94cb565307fe655b952f94eed9/calorine-1.2.tar.gz (from https://pypi.org/simple/calorine/) (requires-python:>=3.8), version: 1.2 2023-09-29T05:16:19,197 Found link https://files.pythonhosted.org/packages/02/38/59a98e7f27baf2fff3280e119037c97cdd591169df079c5973fa9d76b302/calorine-1.3.tar.gz (from https://pypi.org/simple/calorine/) (requires-python:>=3.8), version: 1.3 2023-09-29T05:16:19,198 Found link https://files.pythonhosted.org/packages/1b/6b/49f2e1409c97bff7930b7b8eb3237a5b9b7cb628b58ec31c711817ca41f0/calorine-1.4.tar.gz (from https://pypi.org/simple/calorine/) (requires-python:>=3.8), version: 1.4 2023-09-29T05:16:19,199 Found link https://files.pythonhosted.org/packages/7f/61/476061c1ee80d0f708ba1764aaae930c830fd7b0a30a64d3bc3cb5f4c5ae/calorine-1.5.tar.gz (from https://pypi.org/simple/calorine/) (requires-python:>=3.8), version: 1.5 2023-09-29T05:16:19,199 Found link https://files.pythonhosted.org/packages/05/70/bd0a5851c081a6ec56e001fa3878209e6d01cc1e0dc1373b441a0b580244/calorine-1.6.tar.gz (from https://pypi.org/simple/calorine/) (requires-python:>=3.8), version: 1.6 2023-09-29T05:16:19,201 Found link https://files.pythonhosted.org/packages/e0/00/a4af51042bfb16bd611c724966f133243309c22f90a03c9feea10077e19c/calorine-1.7.tar.gz (from https://pypi.org/simple/calorine/) (requires-python:>=3.8), version: 1.7 2023-09-29T05:16:19,202 Found link https://files.pythonhosted.org/packages/25/71/7949944ca5839149c67f2d5b7afa88430ef0305c5494e1246222eb14ea8e/calorine-2.0.tar.gz (from https://pypi.org/simple/calorine/) (requires-python:>=3.8), version: 2.0 2023-09-29T05:16:19,203 Fetching project page and analyzing links: https://www.piwheels.org/simple/calorine/ 2023-09-29T05:16:19,203 Getting page https://www.piwheels.org/simple/calorine/ 2023-09-29T05:16:19,205 Found index url https://www.piwheels.org/simple/ 2023-09-29T05:16:19,374 Fetched page https://www.piwheels.org/simple/calorine/ as text/html 2023-09-29T05:16:19,379 Skipping link: No binaries permitted for calorine: https://www.piwheels.org/simple/calorine/calorine-1.6-cp39-cp39-linux_armv7l.whl#sha256=d3a7a8a82a503b16a6d624f3eff96eef8b571a568b0dafa318f4543fbd6af17f (from https://www.piwheels.org/simple/calorine/) (requires-python:>=3.8) 2023-09-29T05:16:19,380 Skipping link: No binaries permitted for calorine: https://www.piwheels.org/simple/calorine/calorine-1.6-cp39-cp39-linux_armv6l.whl#sha256=d3a7a8a82a503b16a6d624f3eff96eef8b571a568b0dafa318f4543fbd6af17f (from https://www.piwheels.org/simple/calorine/) (requires-python:>=3.8) 2023-09-29T05:16:19,381 Skipping link: No binaries permitted for calorine: https://www.piwheels.org/simple/calorine/calorine-1.5-cp39-cp39-linux_armv7l.whl#sha256=a6784051036117b75defba85f3d75d7362064038373c6e90e44bd95396a6ddb1 (from https://www.piwheels.org/simple/calorine/) (requires-python:>=3.8) 2023-09-29T05:16:19,382 Skipping link: No binaries permitted for calorine: https://www.piwheels.org/simple/calorine/calorine-1.5-cp39-cp39-linux_armv6l.whl#sha256=a6784051036117b75defba85f3d75d7362064038373c6e90e44bd95396a6ddb1 (from https://www.piwheels.org/simple/calorine/) (requires-python:>=3.8) 2023-09-29T05:16:19,382 Skipping link: No binaries permitted for calorine: https://www.piwheels.org/simple/calorine/calorine-1.4-cp39-cp39-linux_armv7l.whl#sha256=6ffdb0fa940b990972cc0ae00e0ea6335e2fe7d3ef548e5653b989105e3f182f (from https://www.piwheels.org/simple/calorine/) (requires-python:>=3.8) 2023-09-29T05:16:19,382 Skipping link: No binaries permitted for calorine: https://www.piwheels.org/simple/calorine/calorine-1.4-cp39-cp39-linux_armv6l.whl#sha256=6ffdb0fa940b990972cc0ae00e0ea6335e2fe7d3ef548e5653b989105e3f182f (from https://www.piwheels.org/simple/calorine/) (requires-python:>=3.8) 2023-09-29T05:16:19,383 Skipping link: No binaries permitted for calorine: https://www.piwheels.org/simple/calorine/calorine-1.1-cp39-cp39-linux_armv7l.whl#sha256=5c00ade16905a545571aed57f971200d98887fab563d4c5c7b9676915ec2aceb (from https://www.piwheels.org/simple/calorine/) 2023-09-29T05:16:19,383 Skipping link: No binaries permitted for calorine: https://www.piwheels.org/simple/calorine/calorine-1.1-cp39-cp39-linux_armv6l.whl#sha256=5c00ade16905a545571aed57f971200d98887fab563d4c5c7b9676915ec2aceb (from https://www.piwheels.org/simple/calorine/) 2023-09-29T05:16:19,384 Skipping link: No binaries permitted for calorine: https://www.piwheels.org/simple/calorine/calorine-1.1-cp37-cp37m-linux_armv7l.whl#sha256=c2edfd7b97c0df0babf2392683e0798921edacbf28d8c715acefe02e5f4c8e62 (from https://www.piwheels.org/simple/calorine/) 2023-09-29T05:16:19,384 Skipping link: No binaries permitted for calorine: https://www.piwheels.org/simple/calorine/calorine-1.1-cp37-cp37m-linux_armv6l.whl#sha256=c2edfd7b97c0df0babf2392683e0798921edacbf28d8c715acefe02e5f4c8e62 (from https://www.piwheels.org/simple/calorine/) 2023-09-29T05:16:19,385 Skipping link: No binaries permitted for calorine: https://www.piwheels.org/simple/calorine/calorine-1.0-cp39-cp39-linux_armv7l.whl#sha256=19582f5985781dca6d58bacdb947d1956345ffe73d62312ef2922e5fe2b0274e (from https://www.piwheels.org/simple/calorine/) 2023-09-29T05:16:19,386 Skipping link: No binaries permitted for calorine: https://www.piwheels.org/simple/calorine/calorine-1.0-cp39-cp39-linux_armv6l.whl#sha256=19582f5985781dca6d58bacdb947d1956345ffe73d62312ef2922e5fe2b0274e (from https://www.piwheels.org/simple/calorine/) 2023-09-29T05:16:19,386 Skipping link: No binaries permitted for calorine: https://www.piwheels.org/simple/calorine/calorine-1.0-cp37-cp37m-linux_armv7l.whl#sha256=f40b9e6da126bb222aa48362a8bd94c26acd6d5d8201b5d570c60ccb67a2ec4f (from https://www.piwheels.org/simple/calorine/) 2023-09-29T05:16:19,387 Skipping link: No binaries permitted for calorine: https://www.piwheels.org/simple/calorine/calorine-1.0-cp37-cp37m-linux_armv6l.whl#sha256=f40b9e6da126bb222aa48362a8bd94c26acd6d5d8201b5d570c60ccb67a2ec4f (from https://www.piwheels.org/simple/calorine/) 2023-09-29T05:16:19,388 Skipping link: not a file: https://www.piwheels.org/simple/calorine/ 2023-09-29T05:16:19,388 Skipping link: not a file: https://pypi.org/simple/calorine/ 2023-09-29T05:16:19,408 Given no hashes to check 1 links for project 'calorine': discarding no candidates 2023-09-29T05:16:19,425 Collecting calorine==2.0 2023-09-29T05:16:19,428 Created temporary directory: /tmp/pip-unpack-dmfhojpm 2023-09-29T05:16:19,961 Downloading calorine-2.0.tar.gz (3.2 MB) 2023-09-29T05:16:21,097 Added calorine==2.0 from https://files.pythonhosted.org/packages/25/71/7949944ca5839149c67f2d5b7afa88430ef0305c5494e1246222eb14ea8e/calorine-2.0.tar.gz to build tracker '/tmp/pip-build-tracker-613c1t9_' 2023-09-29T05:16:21,102 Created temporary directory: /tmp/pip-build-env-98138wlo 2023-09-29T05:16:21,107 Installing build dependencies: started 2023-09-29T05:16:21,108 Running command pip subprocess to install build dependencies 2023-09-29T05:16:22,242 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-09-29T05:16:22,767 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-29T05:16:24,348 Collecting setuptools>=42 2023-09-29T05:16:24,431 Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.2.2-py3-none-any.whl (807 kB) 2023-09-29T05:16:24,664 Collecting wheel 2023-09-29T05:16:24,679 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB) 2023-09-29T05:16:24,850 Collecting pybind11~=2.6.1 2023-09-29T05:16:24,863 Downloading https://www.piwheels.org/simple/pybind11/pybind11-2.6.2-py2.py3-none-any.whl (191 kB) 2023-09-29T05:16:24,895 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 191.4/191.4 kB 8.4 MB/s eta 0:00:00 2023-09-29T05:16:27,480 Installing collected packages: wheel, setuptools, pybind11 2023-09-29T05:16:27,785 Creating /tmp/pip-build-env-98138wlo/overlay/local/bin 2023-09-29T05:16:27,787 changing mode of /tmp/pip-build-env-98138wlo/overlay/local/bin/wheel to 755 2023-09-29T05:16:30,070 changing mode of /tmp/pip-build-env-98138wlo/overlay/local/bin/pybind11-config to 755 2023-09-29T05:16:30,090 Successfully installed pybind11-2.6.2 setuptools-68.2.2 wheel-0.41.2 2023-09-29T05:16:30,659 Installing build dependencies: finished with status 'done' 2023-09-29T05:16:30,662 Getting requirements to build wheel: started 2023-09-29T05:16:30,664 Running command Getting requirements to build wheel 2023-09-29T05:16:31,186 running egg_info 2023-09-29T05:16:31,190 writing calorine.egg-info/PKG-INFO 2023-09-29T05:16:31,193 writing dependency_links to calorine.egg-info/dependency_links.txt 2023-09-29T05:16:31,195 writing requirements to calorine.egg-info/requires.txt 2023-09-29T05:16:31,196 writing top-level names to calorine.egg-info/top_level.txt 2023-09-29T05:16:31,217 reading manifest file 'calorine.egg-info/SOURCES.txt' 2023-09-29T05:16:31,238 adding license file 'LICENSE' 2023-09-29T05:16:31,244 writing manifest file 'calorine.egg-info/SOURCES.txt' 2023-09-29T05:16:31,323 Getting requirements to build wheel: finished with status 'done' 2023-09-29T05:16:31,331 Created temporary directory: /tmp/pip-modern-metadata-fmjc5d78 2023-09-29T05:16:31,333 Preparing metadata (pyproject.toml): started 2023-09-29T05:16:31,335 Running command Preparing metadata (pyproject.toml) 2023-09-29T05:16:31,838 running dist_info 2023-09-29T05:16:31,865 creating /tmp/pip-modern-metadata-fmjc5d78/calorine.egg-info 2023-09-29T05:16:31,872 writing /tmp/pip-modern-metadata-fmjc5d78/calorine.egg-info/PKG-INFO 2023-09-29T05:16:31,877 writing dependency_links to /tmp/pip-modern-metadata-fmjc5d78/calorine.egg-info/dependency_links.txt 2023-09-29T05:16:31,880 writing requirements to /tmp/pip-modern-metadata-fmjc5d78/calorine.egg-info/requires.txt 2023-09-29T05:16:31,882 writing top-level names to /tmp/pip-modern-metadata-fmjc5d78/calorine.egg-info/top_level.txt 2023-09-29T05:16:31,884 writing manifest file '/tmp/pip-modern-metadata-fmjc5d78/calorine.egg-info/SOURCES.txt' 2023-09-29T05:16:31,905 reading manifest file '/tmp/pip-modern-metadata-fmjc5d78/calorine.egg-info/SOURCES.txt' 2023-09-29T05:16:31,908 adding license file 'LICENSE' 2023-09-29T05:16:31,911 writing manifest file '/tmp/pip-modern-metadata-fmjc5d78/calorine.egg-info/SOURCES.txt' 2023-09-29T05:16:31,912 creating '/tmp/pip-modern-metadata-fmjc5d78/calorine-2.0.dist-info' 2023-09-29T05:16:32,093 Preparing metadata (pyproject.toml): finished with status 'done' 2023-09-29T05:16:32,098 Source in /tmp/pip-wheel-v5xebi39/calorine_75692154b5174f588bdfe9851d09b48e has version 2.0, which satisfies requirement calorine==2.0 from https://files.pythonhosted.org/packages/25/71/7949944ca5839149c67f2d5b7afa88430ef0305c5494e1246222eb14ea8e/calorine-2.0.tar.gz 2023-09-29T05:16:32,099 Removed calorine==2.0 from https://files.pythonhosted.org/packages/25/71/7949944ca5839149c67f2d5b7afa88430ef0305c5494e1246222eb14ea8e/calorine-2.0.tar.gz from build tracker '/tmp/pip-build-tracker-613c1t9_' 2023-09-29T05:16:32,104 Created temporary directory: /tmp/pip-unpack-0lbdtzif 2023-09-29T05:16:32,105 Created temporary directory: /tmp/pip-unpack-utd6zvr8 2023-09-29T05:16:32,112 Building wheels for collected packages: calorine 2023-09-29T05:16:32,116 Created temporary directory: /tmp/pip-wheel-q65t2t5p 2023-09-29T05:16:32,116 Destination directory: /tmp/pip-wheel-q65t2t5p 2023-09-29T05:16:32,118 Building wheel for calorine (pyproject.toml): started 2023-09-29T05:16:32,119 Running command Building wheel for calorine (pyproject.toml) 2023-09-29T05:16:32,655 running bdist_wheel 2023-09-29T05:16:32,684 running build 2023-09-29T05:16:32,685 running build_py 2023-09-29T05:16:32,693 creating build 2023-09-29T05:16:32,694 creating build/lib.linux-armv7l-cpython-311 2023-09-29T05:16:32,695 creating build/lib.linux-armv7l-cpython-311/calorine 2023-09-29T05:16:32,696 copying calorine/__init__.py -> build/lib.linux-armv7l-cpython-311/calorine 2023-09-29T05:16:32,698 creating build/lib.linux-armv7l-cpython-311/calorine/calculators 2023-09-29T05:16:32,699 copying calorine/calculators/cpunep.py -> build/lib.linux-armv7l-cpython-311/calorine/calculators 2023-09-29T05:16:32,701 copying calorine/calculators/__init__.py -> build/lib.linux-armv7l-cpython-311/calorine/calculators 2023-09-29T05:16:32,703 copying calorine/calculators/gpunep.py -> build/lib.linux-armv7l-cpython-311/calorine/calculators 2023-09-29T05:16:32,705 creating build/lib.linux-armv7l-cpython-311/calorine/tools 2023-09-29T05:16:32,706 copying calorine/tools/phonons.py -> build/lib.linux-armv7l-cpython-311/calorine/tools 2023-09-29T05:16:32,708 copying calorine/tools/structures.py -> build/lib.linux-armv7l-cpython-311/calorine/tools 2023-09-29T05:16:32,710 copying calorine/tools/__init__.py -> build/lib.linux-armv7l-cpython-311/calorine/tools 2023-09-29T05:16:32,711 copying calorine/tools/analysis.py -> build/lib.linux-armv7l-cpython-311/calorine/tools 2023-09-29T05:16:32,714 copying calorine/tools/stiffness.py -> build/lib.linux-armv7l-cpython-311/calorine/tools 2023-09-29T05:16:32,716 creating build/lib.linux-armv7l-cpython-311/calorine/gpumd 2023-09-29T05:16:32,717 copying calorine/gpumd/io.py -> build/lib.linux-armv7l-cpython-311/calorine/gpumd 2023-09-29T05:16:32,719 copying calorine/gpumd/__init__.py -> build/lib.linux-armv7l-cpython-311/calorine/gpumd 2023-09-29T05:16:32,721 creating build/lib.linux-armv7l-cpython-311/calorine/nep 2023-09-29T05:16:32,722 copying calorine/nep/model.py -> build/lib.linux-armv7l-cpython-311/calorine/nep 2023-09-29T05:16:32,725 copying calorine/nep/nep.py -> build/lib.linux-armv7l-cpython-311/calorine/nep 2023-09-29T05:16:32,727 copying calorine/nep/io.py -> build/lib.linux-armv7l-cpython-311/calorine/nep 2023-09-29T05:16:32,730 copying calorine/nep/__init__.py -> build/lib.linux-armv7l-cpython-311/calorine/nep 2023-09-29T05:16:32,732 copying calorine/nep/training_factory.py -> build/lib.linux-armv7l-cpython-311/calorine/nep 2023-09-29T05:16:32,737 running build_ext 2023-09-29T05:16:32,744 creating tmp 2023-09-29T05:16:32,744 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c /tmp/tmpgg_9jfui.cpp -o tmp/tmpgg_9jfui.o -std=c++14 2023-09-29T05:16:32,810 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c /tmp/tmpqizpg3sh.cpp -o tmp/tmpqizpg3sh.o -fvisibility=hidden 2023-09-29T05:16:32,873 building '_nepy' extension 2023-09-29T05:16:32,873 creating build/temp.linux-armv7l-cpython-311 2023-09-29T05:16:32,874 creating build/temp.linux-armv7l-cpython-311/src 2023-09-29T05:16:32,874 creating build/temp.linux-armv7l-cpython-311/src/nepy 2023-09-29T05:16:32,875 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-98138wlo/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c src/nepy/nepy.cpp -o build/temp.linux-armv7l-cpython-311/src/nepy/nepy.o -DVERSION_INFO='2.0' -std=c++14 -fvisibility=hidden -O3 -shared -fPIC 2023-09-29T05:16:35,836 In file included from src/nepy/nepy.cpp:2: 2023-09-29T05:16:35,837 src/nepy/nep.cpp: In member function ‘void NEP3::init_from_file(const std::string&, bool)’: 2023-09-29T05:16:35,837 src/nepy/nep.cpp:2383:21: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2023-09-29T05:16:35,838 2383 | if (tokens.size() != 2 + paramb.num_types) { 2023-09-29T05:16:35,838 | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ 2023-09-29T05:16:35,874 src/nepy/nep.cpp: In member function ‘void NEP3::compute(const std::vector&, const std::vector&, const std::vector&, std::vector&, std::vector&, std::vector&)’: 2023-09-29T05:16:35,875 src/nepy/nep.cpp:2691:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-09-29T05:16:35,876 2691 | if (N * 3 != position.size()) { 2023-09-29T05:16:35,876 | ~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-29T05:16:35,877 src/nepy/nep.cpp:2695:9: warning: comparison of integer expressions of different signedness: ‘const int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-09-29T05:16:35,878 2695 | if (N != potential.size()) { 2023-09-29T05:16:35,879 | ~~^~~~~~~~~~~~~~~~~~~ 2023-09-29T05:16:35,880 src/nepy/nep.cpp:2699:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-09-29T05:16:35,880 2699 | if (N * 3 != force.size()) { 2023-09-29T05:16:35,881 | ~~~~~~^~~~~~~~~~~~~~~ 2023-09-29T05:16:35,882 src/nepy/nep.cpp:2703:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-09-29T05:16:35,882 2703 | if (N * 9 != virial.size()) { 2023-09-29T05:16:35,883 | ~~~~~~^~~~~~~~~~~~~~~~ 2023-09-29T05:16:35,884 src/nepy/nep.cpp:2710:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-09-29T05:16:35,884 2710 | for (int n = 0; n < potential.size(); ++n) { 2023-09-29T05:16:35,885 | ~~^~~~~~~~~~~~~~~~~~ 2023-09-29T05:16:35,886 src/nepy/nep.cpp:2713:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-09-29T05:16:35,886 2713 | for (int n = 0; n < force.size(); ++n) { 2023-09-29T05:16:35,887 | ~~^~~~~~~~~~~~~~ 2023-09-29T05:16:35,888 src/nepy/nep.cpp:2716:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-09-29T05:16:35,888 2716 | for (int n = 0; n < virial.size(); ++n) { 2023-09-29T05:16:35,889 | ~~^~~~~~~~~~~~~~~ 2023-09-29T05:16:35,892 src/nepy/nep.cpp: In member function ‘void NEP3::compute_dftd3(const std::string&, double, double, const std::vector&, const std::vector&, const std::vector&, std::vector&, std::vector&, std::vector&)’: 2023-09-29T05:16:35,893 src/nepy/nep.cpp:2809:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-09-29T05:16:35,893 2809 | if (N * 3 != position.size()) { 2023-09-29T05:16:35,894 | ~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-29T05:16:35,895 src/nepy/nep.cpp:2813:9: warning: comparison of integer expressions of different signedness: ‘const int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-09-29T05:16:35,895 2813 | if (N != potential.size()) { 2023-09-29T05:16:35,896 | ~~^~~~~~~~~~~~~~~~~~~ 2023-09-29T05:16:35,896 src/nepy/nep.cpp:2817:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-09-29T05:16:35,897 2817 | if (N * 3 != force.size()) { 2023-09-29T05:16:35,897 | ~~~~~~^~~~~~~~~~~~~~~ 2023-09-29T05:16:35,898 src/nepy/nep.cpp:2821:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-09-29T05:16:35,898 2821 | if (N * 9 != virial.size()) { 2023-09-29T05:16:35,899 | ~~~~~~^~~~~~~~~~~~~~~~ 2023-09-29T05:16:35,899 src/nepy/nep.cpp:2828:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-09-29T05:16:35,900 2828 | for (int n = 0; n < potential.size(); ++n) { 2023-09-29T05:16:35,901 | ~~^~~~~~~~~~~~~~~~~~ 2023-09-29T05:16:35,902 src/nepy/nep.cpp:2831:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-09-29T05:16:35,902 2831 | for (int n = 0; n < force.size(); ++n) { 2023-09-29T05:16:35,903 | ~~^~~~~~~~~~~~~~ 2023-09-29T05:16:35,904 src/nepy/nep.cpp:2834:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-09-29T05:16:35,905 2834 | for (int n = 0; n < virial.size(); ++n) { 2023-09-29T05:16:35,905 | ~~^~~~~~~~~~~~~~~ 2023-09-29T05:16:35,906 src/nepy/nep.cpp: In member function ‘void NEP3::find_descriptor(const std::vector&, const std::vector&, const std::vector&, std::vector&)’: 2023-09-29T05:16:35,907 src/nepy/nep.cpp:2864:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-09-29T05:16:35,908 2864 | if (N * 3 != position.size()) { 2023-09-29T05:16:35,908 | ~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-29T05:16:35,909 src/nepy/nep.cpp:2868:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-09-29T05:16:35,909 2868 | if (N * annmb.dim != descriptor.size()) { 2023-09-29T05:16:35,910 | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ 2023-09-29T05:16:35,911 src/nepy/nep.cpp: In member function ‘void NEP3::find_latent_space(const std::vector&, const std::vector&, const std::vector&, std::vector&)’: 2023-09-29T05:16:35,912 src/nepy/nep.cpp:2899:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-09-29T05:16:35,912 2899 | if (N * 3 != position.size()) { 2023-09-29T05:16:35,913 | ~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-29T05:16:35,914 src/nepy/nep.cpp:2903:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-09-29T05:16:35,914 2903 | if (N * annmb.num_neurons1 != latent_space.size()) { 2023-09-29T05:16:35,915 | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 2023-09-29T05:16:35,915 src/nepy/nep.cpp: In member function ‘void NEP3::find_dipole(const std::vector&, const std::vector&, const std::vector&, std::vector&)’: 2023-09-29T05:16:35,916 src/nepy/nep.cpp:2939:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-09-29T05:16:35,916 2939 | if (N * 3 != position.size()) { 2023-09-29T05:16:35,917 | ~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-29T05:16:35,917 src/nepy/nep.cpp:2948:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-09-29T05:16:35,918 2948 | for (int n = 0; n < potential.size(); ++n) { 2023-09-29T05:16:35,918 | ~~^~~~~~~~~~~~~~~~~~ 2023-09-29T05:16:35,919 src/nepy/nep.cpp:2951:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-09-29T05:16:35,919 2951 | for (int n = 0; n < virial.size(); ++n) { 2023-09-29T05:16:35,920 | ~~^~~~~~~~~~~~~~~ 2023-09-29T05:16:35,921 src/nepy/nep.cpp: In member function ‘void NEP3::find_polarizability(const std::vector&, const std::vector&, const std::vector&, std::vector&)’: 2023-09-29T05:16:35,921 src/nepy/nep.cpp:3008:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-09-29T05:16:35,922 3008 | if (N * 3 != position.size()) { 2023-09-29T05:16:35,922 | ~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-29T05:16:35,923 src/nepy/nep.cpp:3017:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-09-29T05:16:35,924 3017 | for (int n = 0; n < potential.size(); ++n) { 2023-09-29T05:16:35,925 | ~~^~~~~~~~~~~~~~~~~~ 2023-09-29T05:16:35,925 src/nepy/nep.cpp:3020:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-09-29T05:16:35,926 3020 | for (int n = 0; n < virial.size(); ++n) { 2023-09-29T05:16:35,927 | ~~^~~~~~~~~~~~~~~ 2023-09-29T05:16:37,524 In file included from /tmp/pip-build-env-98138wlo/overlay/local/lib/python3.11/dist-packages/pybind11/include/pybind11/attr.h:13, 2023-09-29T05:16:37,524 from /tmp/pip-build-env-98138wlo/overlay/local/lib/python3.11/dist-packages/pybind11/include/pybind11/pybind11.h:45, 2023-09-29T05:16:37,525 from /tmp/pip-build-env-98138wlo/overlay/local/lib/python3.11/dist-packages/pybind11/include/pybind11/iostream.h:12, 2023-09-29T05:16:37,526 from src/nepy/nepy.cpp:5: 2023-09-29T05:16:37,526 /tmp/pip-build-env-98138wlo/overlay/local/lib/python3.11/dist-packages/pybind11/include/pybind11/cast.h: In function ‘std::string pybind11::detail::error_string()’: 2023-09-29T05:16:37,527 /tmp/pip-build-env-98138wlo/overlay/local/lib/python3.11/dist-packages/pybind11/include/pybind11/cast.h:446:36: error: invalid use of incomplete type ‘PyFrameObject’ {aka ‘struct _frame’} 2023-09-29T05:16:37,528 446 | " " + handle(frame->f_code->co_filename).cast() + 2023-09-29T05:16:37,528 | ^~ 2023-09-29T05:16:37,529 In file included from /usr/include/python3.11/Python.h:42, 2023-09-29T05:16:37,530 from /tmp/pip-build-env-98138wlo/overlay/local/lib/python3.11/dist-packages/pybind11/include/pybind11/detail/common.h:124, 2023-09-29T05:16:37,531 from /tmp/pip-build-env-98138wlo/overlay/local/lib/python3.11/dist-packages/pybind11/include/pybind11/pytypes.h:12, 2023-09-29T05:16:37,531 from /tmp/pip-build-env-98138wlo/overlay/local/lib/python3.11/dist-packages/pybind11/include/pybind11/cast.h:13: 2023-09-29T05:16:37,532 /usr/include/python3.11/pytypedefs.h:22:16: note: forward declaration of ‘PyFrameObject’ {aka ‘struct _frame’} 2023-09-29T05:16:37,532 22 | typedef struct _frame PyFrameObject; 2023-09-29T05:16:37,533 | ^~~~~~ 2023-09-29T05:16:37,533 /tmp/pip-build-env-98138wlo/overlay/local/lib/python3.11/dist-packages/pybind11/include/pybind11/cast.h:446:75: error: expected primary-expression before ‘>’ token 2023-09-29T05:16:37,534 446 | " " + handle(frame->f_code->co_filename).cast() + 2023-09-29T05:16:37,535 | ^ 2023-09-29T05:16:37,535 /tmp/pip-build-env-98138wlo/overlay/local/lib/python3.11/dist-packages/pybind11/include/pybind11/cast.h:446:77: error: expected primary-expression before ‘)’ token 2023-09-29T05:16:37,536 446 | " " + handle(frame->f_code->co_filename).cast() + 2023-09-29T05:16:37,536 | ^ 2023-09-29T05:16:37,537 /tmp/pip-build-env-98138wlo/overlay/local/lib/python3.11/dist-packages/pybind11/include/pybind11/cast.h:448:29: error: invalid use of incomplete type ‘PyFrameObject’ {aka ‘struct _frame’} 2023-09-29T05:16:37,537 448 | handle(frame->f_code->co_name).cast() + "\n"; 2023-09-29T05:16:37,538 | ^~ 2023-09-29T05:16:37,539 /usr/include/python3.11/pytypedefs.h:22:16: note: forward declaration of ‘PyFrameObject’ {aka ‘struct _frame’} 2023-09-29T05:16:37,539 22 | typedef struct _frame PyFrameObject; 2023-09-29T05:16:37,540 | ^~~~~~ 2023-09-29T05:16:37,541 /tmp/pip-build-env-98138wlo/overlay/local/lib/python3.11/dist-packages/pybind11/include/pybind11/cast.h:448:64: error: expected primary-expression before ‘>’ token 2023-09-29T05:16:37,542 448 | handle(frame->f_code->co_name).cast() + "\n"; 2023-09-29T05:16:37,543 | ^ 2023-09-29T05:16:37,543 /tmp/pip-build-env-98138wlo/overlay/local/lib/python3.11/dist-packages/pybind11/include/pybind11/cast.h:448:66: error: expected primary-expression before ‘)’ token 2023-09-29T05:16:37,544 448 | handle(frame->f_code->co_name).cast() + "\n"; 2023-09-29T05:16:37,545 | ^ 2023-09-29T05:16:37,545 /tmp/pip-build-env-98138wlo/overlay/local/lib/python3.11/dist-packages/pybind11/include/pybind11/cast.h:449:26: error: invalid use of incomplete type ‘PyFrameObject’ {aka ‘struct _frame’} 2023-09-29T05:16:37,546 449 | frame = frame->f_back; 2023-09-29T05:16:37,546 | ^~ 2023-09-29T05:16:37,547 /usr/include/python3.11/pytypedefs.h:22:16: note: forward declaration of ‘PyFrameObject’ {aka ‘struct _frame’} 2023-09-29T05:16:37,548 22 | typedef struct _frame PyFrameObject; 2023-09-29T05:16:37,548 | ^~~~~~ 2023-09-29T05:16:38,204 /tmp/pip-build-env-98138wlo/overlay/local/lib/python3.11/dist-packages/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::function pybind11::detail::get_type_override(const void*, const type_info*, const char*)’: 2023-09-29T05:16:38,205 /tmp/pip-build-env-98138wlo/overlay/local/lib/python3.11/dist-packages/pybind11/include/pybind11/pybind11.h:2291:49: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘frame’; did you mean ‘cframe’? 2023-09-29T05:16:38,206 2291 | PyFrameObject *frame = PyThreadState_Get()->frame; 2023-09-29T05:16:38,206 | ^~~~~ 2023-09-29T05:16:38,207 | cframe 2023-09-29T05:16:38,207 /tmp/pip-build-env-98138wlo/overlay/local/lib/python3.11/dist-packages/pybind11/include/pybind11/pybind11.h:2292:41: error: invalid use of incomplete type ‘PyFrameObject’ {aka ‘struct _frame’} 2023-09-29T05:16:38,208 2292 | if (frame && (std::string) str(frame->f_code->co_name) == name && 2023-09-29T05:16:38,208 | ^~ 2023-09-29T05:16:38,209 /usr/include/python3.11/pytypedefs.h:22:16: note: forward declaration of ‘PyFrameObject’ {aka ‘struct _frame’} 2023-09-29T05:16:38,209 22 | typedef struct _frame PyFrameObject; 2023-09-29T05:16:38,210 | ^~~~~~ 2023-09-29T05:16:38,210 /tmp/pip-build-env-98138wlo/overlay/local/lib/python3.11/dist-packages/pybind11/include/pybind11/pybind11.h:2293:14: error: invalid use of incomplete type ‘PyFrameObject’ {aka ‘struct _frame’} 2023-09-29T05:16:38,211 2293 | frame->f_code->co_argcount > 0) { 2023-09-29T05:16:38,211 | ^~ 2023-09-29T05:16:38,212 /usr/include/python3.11/pytypedefs.h:22:16: note: forward declaration of ‘PyFrameObject’ {aka ‘struct _frame’} 2023-09-29T05:16:38,212 22 | typedef struct _frame PyFrameObject; 2023-09-29T05:16:38,213 | ^~~~~~ 2023-09-29T05:16:38,214 /tmp/pip-build-env-98138wlo/overlay/local/lib/python3.11/dist-packages/pybind11/include/pybind11/pybind11.h:2296:18: error: invalid use of incomplete type ‘PyFrameObject’ {aka ‘struct _frame’} 2023-09-29T05:16:38,214 2296 | frame->f_locals, PyTuple_GET_ITEM(frame->f_code->co_varnames, 0)); 2023-09-29T05:16:38,215 | ^~ 2023-09-29T05:16:38,216 /usr/include/python3.11/pytypedefs.h:22:16: note: forward declaration of ‘PyFrameObject’ {aka ‘struct _frame’} 2023-09-29T05:16:38,216 22 | typedef struct _frame PyFrameObject; 2023-09-29T05:16:38,217 | ^~~~~~ 2023-09-29T05:16:38,218 In file included from /usr/include/python3.11/Python.h:38: 2023-09-29T05:16:38,219 /tmp/pip-build-env-98138wlo/overlay/local/lib/python3.11/dist-packages/pybind11/include/pybind11/pybind11.h:2296:52: error: invalid use of incomplete type ‘PyFrameObject’ {aka ‘struct _frame’} 2023-09-29T05:16:38,219 2296 | frame->f_locals, PyTuple_GET_ITEM(frame->f_code->co_varnames, 0)); 2023-09-29T05:16:38,220 | ^~ 2023-09-29T05:16:38,220 /usr/include/python3.11/pyport.h:24:38: note: in definition of macro ‘_Py_CAST’ 2023-09-29T05:16:38,221 24 | #define _Py_CAST(type, expr) ((type)(expr)) 2023-09-29T05:16:38,222 | ^~~~ 2023-09-29T05:16:38,222 /usr/include/python3.11/cpython/tupleobject.h:30:38: note: in expansion of macro ‘_PyTuple_CAST’ 2023-09-29T05:16:38,223 30 | #define PyTuple_GET_ITEM(op, index) (_PyTuple_CAST(op)->ob_item[index]) 2023-09-29T05:16:38,224 | ^~~~~~~~~~~~~ 2023-09-29T05:16:38,224 /tmp/pip-build-env-98138wlo/overlay/local/lib/python3.11/dist-packages/pybind11/include/pybind11/pybind11.h:2296:30: note: in expansion of macro ‘PyTuple_GET_ITEM’ 2023-09-29T05:16:38,225 2296 | frame->f_locals, PyTuple_GET_ITEM(frame->f_code->co_varnames, 0)); 2023-09-29T05:16:38,226 | ^~~~~~~~~~~~~~~~ 2023-09-29T05:16:38,227 /usr/include/python3.11/pytypedefs.h:22:16: note: forward declaration of ‘PyFrameObject’ {aka ‘struct _frame’} 2023-09-29T05:16:38,227 22 | typedef struct _frame PyFrameObject; 2023-09-29T05:16:38,228 | ^~~~~~ 2023-09-29T05:16:43,232 error: command '/usr/bin/arm-linux-gnueabihf-gcc' failed with exit code 1 2023-09-29T05:16:43,318 ERROR: [present-rich] Building wheel for calorine (pyproject.toml) exited with 1 2023-09-29T05:16:43,331 [bold magenta]full command[/]: [blue]/usr/bin/python3 /usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py build_wheel /tmp/tmptyx6eex3[/] 2023-09-29T05:16:43,331 [bold magenta]cwd[/]: /tmp/pip-wheel-v5xebi39/calorine_75692154b5174f588bdfe9851d09b48e 2023-09-29T05:16:43,332 Building wheel for calorine (pyproject.toml): finished with status 'error' 2023-09-29T05:16:43,334 ERROR: Failed building wheel for calorine 2023-09-29T05:16:43,336 Failed to build calorine 2023-09-29T05:16:43,337 ERROR: Failed to build one or more wheels 2023-09-29T05:16:43,338 Exception information: 2023-09-29T05:16:43,338 Traceback (most recent call last): 2023-09-29T05:16:43,338 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper 2023-09-29T05:16:43,338 status = run_func(*args) 2023-09-29T05:16:43,338 ^^^^^^^^^^^^^^^ 2023-09-29T05:16:43,338 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper 2023-09-29T05:16:43,338 return func(self, options, args) 2023-09-29T05:16:43,338 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-29T05:16:43,338 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 181, in run 2023-09-29T05:16:43,338 raise CommandError("Failed to build one or more wheels") 2023-09-29T05:16:43,338 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2023-09-29T05:16:43,341 Removed build tracker: '/tmp/pip-build-tracker-613c1t9_'