2023-09-29T07:12:38,882 Created temporary directory: /tmp/pip-build-tracker-vw3oeavo
2023-09-29T07:12:38,883 Initialized build tracking at /tmp/pip-build-tracker-vw3oeavo
2023-09-29T07:12:38,883 Created build tracker: /tmp/pip-build-tracker-vw3oeavo
2023-09-29T07:12:38,884 Entered build tracker: /tmp/pip-build-tracker-vw3oeavo
2023-09-29T07:12:38,885 Created temporary directory: /tmp/pip-wheel-nvpgn8vf
2023-09-29T07:12:38,888 Created temporary directory: /tmp/pip-ephem-wheel-cache-_4yi_rox
2023-09-29T07:12:38,912 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-29T07:12:38,916 2 location(s) to search for versions of moleculekit:
2023-09-29T07:12:38,916 * https://pypi.org/simple/moleculekit/
2023-09-29T07:12:38,916 * https://www.piwheels.org/simple/moleculekit/
2023-09-29T07:12:38,916 Fetching project page and analyzing links: https://pypi.org/simple/moleculekit/
2023-09-29T07:12:38,917 Getting page https://pypi.org/simple/moleculekit/
2023-09-29T07:12:38,919 Found index url https://pypi.org/simple/
2023-09-29T07:12:39,079 Fetched page https://pypi.org/simple/moleculekit/ as application/vnd.pypi.simple.v1+json
2023-09-29T07:12:39,116   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/91/e6/25b6853357dfef8a4026325e420d8213d34c17c078a2f13b60cbb6213ea3/moleculekit-0.1.4-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,117   Found link https://files.pythonhosted.org/packages/13/0f/a200e8e7632d3a521cfc7c15fa4d0270802efce40f98ac5a5cae58385b7e/moleculekit-0.1.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.4
2023-09-29T07:12:39,117   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/9f/a5/eac32fcb2e9ff0d30298aa4cec8e152c95d675c4dd1a1a5d7676986d4d75/moleculekit-0.1.5-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,118   Found link https://files.pythonhosted.org/packages/c5/6f/ae7d1b8513eb23ec0fa8e153c42fda0ee96f9e29c6e4808c5ff78c115e89/moleculekit-0.1.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.5
2023-09-29T07:12:39,119   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/e2/51/0f4e4b95d0d5c16664ede7f2cd31e6d6003e9c940a8fbe28c74de91de627/moleculekit-0.1.6-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,119   Found link https://files.pythonhosted.org/packages/08/fa/bc1b5918a1715901fd0ea1e796de9e6647276943983962616f2ddceb1c3b/moleculekit-0.1.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.6
2023-09-29T07:12:39,120   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/49/59/ddf780e7a574dde727d5db8b93c41bcc3d19436a8ae9f468bad5ea48529e/moleculekit-0.1.7-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,120   Found link https://files.pythonhosted.org/packages/c7/cb/d1b609de2d59d10a60ca74c9d1a044534f608e323dc16a87e5bd77ee0eb0/moleculekit-0.1.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.7
2023-09-29T07:12:39,121   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/5b/a4/59e6017c4e5b99be72d8e0eb6b6442061f338e309d91c25d607162298d11/moleculekit-0.1.8-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,122   Found link https://files.pythonhosted.org/packages/c0/1d/753c7461942457e39fb069504cdc381518a4ef18f486de0a42572236095e/moleculekit-0.1.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.8
2023-09-29T07:12:39,123   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/28/39/e4219020234475a17077f38ebcbdff236872d8e3a0455b376edb847f4141/moleculekit-0.1.9-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,123   Found link https://files.pythonhosted.org/packages/e0/c6/5d47b6257a3d1aca76d635d1dc8fffd6ed712fbe324bfeb2f2da47edda09/moleculekit-0.1.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.9
2023-09-29T07:12:39,124   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/3c/12/42a0a156c8a51b2ef9de7c720cbcd226c1b0a7d13dce7dcdd4c34480e05f/moleculekit-0.1.12-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,125   Found link https://files.pythonhosted.org/packages/12/9d/ef12aeb7165210a6d06f5a735640db6c49cda2597bebb3584e72f7a2aee5/moleculekit-0.1.12.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.12
2023-09-29T07:12:39,125   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/e0/de/ddea29e806547e8743801bd5b44f5f4b62e96a3b6aa1b59e7ae3c183e65d/moleculekit-0.1.14-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,126   Found link https://files.pythonhosted.org/packages/0f/b8/5dce8ade2a03ba18558275d58f1f586fc78b76442ca923e02e05b7aa4638/moleculekit-0.1.14.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.14
2023-09-29T07:12:39,126   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/98/67/c911fd0aab052ed8866739c282be96070bcafee75cad331165f356d0bf11/moleculekit-0.1.15-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,127   Found link https://files.pythonhosted.org/packages/be/5c/b803aa60ac93136e6fce9ab52ec50aec246481c5db76892780152f769d75/moleculekit-0.1.15.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.15
2023-09-29T07:12:39,127   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/4f/30/78d34f8541a5e0e7488b6d59c43b29cf4d9f42467553fb0cee41312409c7/moleculekit-0.1.16-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,128   Found link https://files.pythonhosted.org/packages/d3/39/0774efc740b7e6a6969e084e0eb126483049a60229de80cc09a1a4b78011/moleculekit-0.1.16.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.16
2023-09-29T07:12:39,129   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/ca/d8/f9dd491ee5984f59dbd1206bb41062543e1a1664bb002d4b2675ec3f882c/moleculekit-0.1.17-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,129   Found link https://files.pythonhosted.org/packages/f6/27/b820e1158e448f35830265eeb023ec7d7cc72272136a31ec5365a893174f/moleculekit-0.1.17.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.17
2023-09-29T07:12:39,130   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/0d/df/1d0dfd734e1d67c6ba1a1291b6f530c60eb3a65c25e2990d0fb62c73dbea/moleculekit-0.1.19-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,130   Found link https://files.pythonhosted.org/packages/6e/55/28d041ad7324e063e00ed2e0a5cd91d4c67e6cda3e62c24ab9c3ea2ad5dc/moleculekit-0.1.19.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.19
2023-09-29T07:12:39,131   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/f0/f3/18f3b015e5fdf04c0243d63132d4d29ab807b608bda9cab6de505c060196/moleculekit-0.1.21-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,132   Found link https://files.pythonhosted.org/packages/d7/2f/510d466d4e507523c6f8bb5323a03351e0a9e6422b29ab7a9d7b34101484/moleculekit-0.1.21.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.21
2023-09-29T07:12:39,132   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/2c/83/5bdc26bbc9c0dc6b7fa54260134f5545c6f8c01e50b4cc94de02d0a2f295/moleculekit-0.1.22-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,133   Found link https://files.pythonhosted.org/packages/28/80/3c053d293b0aad5df512b8c7bf1ef111c621ee80bbe08ea83763ca004a85/moleculekit-0.1.22.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.22
2023-09-29T07:12:39,134   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/5d/ec/9e6438a424607cba93fe71b89ef89dbff35369f133ed76ded895861ab290/moleculekit-0.1.23-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,134   Found link https://files.pythonhosted.org/packages/6d/c3/680633af7541d2c7ecf2fde4dc9661f107efaf55688d3f41d15407cb2248/moleculekit-0.1.23.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.23
2023-09-29T07:12:39,135   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/0b/02/f2bbd133b7e76a60bdc1d92d10621ce9f60f8eeaf97ed7dacae2e216cb2b/moleculekit-0.1.24-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,136   Found link https://files.pythonhosted.org/packages/7f/f7/48b8b09fbf6e368925a186ef4cb874ae0abfae6d5b81bd2656502290add5/moleculekit-0.1.24.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.24
2023-09-29T07:12:39,136   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/1e/bd/24146e575547d1fc8bd24b4b7d9a57cbe14c357ebf85d638df6421412465/moleculekit-0.1.26-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,137   Found link https://files.pythonhosted.org/packages/f5/6e/a9dafd4b3b109011d156a6f7c726925669e42435b6049859f3a0a050a87f/moleculekit-0.1.26.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.26
2023-09-29T07:12:39,137   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/fe/63/a0e65b18866805186e3a4ba2b8ece20b73b85ec1ce6b3f8597e0c2508178/moleculekit-0.1.27-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,138   Found link https://files.pythonhosted.org/packages/70/7e/a01a54d9e88eaf00ec47989f360fb98d58e871d500aa28c44b9c7b8bd7ff/moleculekit-0.1.27.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.27
2023-09-29T07:12:39,138   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/f1/db/8f0879b07acae5356393297640e1116c459d28b59d19e1bd328da94e4b7a/moleculekit-0.1.29-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,139   Found link https://files.pythonhosted.org/packages/dc/10/67c6720423554f257425330caf21342c13c59bc86aee634f369b481dad7b/moleculekit-0.1.29.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.29
2023-09-29T07:12:39,140   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/83/f1/2cb963c0a74d919761e8516fe969330c122c9874426ff8eef7834b9b0c62/moleculekit-0.1.30-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,140   Found link https://files.pythonhosted.org/packages/a9/87/cd070158b979d89c02edf2a1deb98ced11e6a442952ed67ebb4f281d6700/moleculekit-0.1.30.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.30
2023-09-29T07:12:39,141   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/cf/c4/f211cc80e281f1ee01040cfa490a65e874a54b5bedf2dfd73e3be6e72d93/moleculekit-0.1.31-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,141   Found link https://files.pythonhosted.org/packages/d7/8b/2b012f3371e5fceb875601e16c83a0ddfd5602d1cdceb953a4b36fc12200/moleculekit-0.1.31.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.31
2023-09-29T07:12:39,142   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/bf/2e/56178883cad4d2429d5cb5fb23d17be42663dea6da428df98f2b70be67a3/moleculekit-0.1.32-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,143   Found link https://files.pythonhosted.org/packages/97/34/992324fd9f1bb4d151b3383f601e3b69810e62c9d3530580ae8b43c4dcca/moleculekit-0.1.32.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.32
2023-09-29T07:12:39,143   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/7e/84/8e678afbcbd29c9b462973571bf3a043a7b5dbf7a98f1ac3dc82c3f5fc91/moleculekit-0.2.0-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,144   Found link https://files.pythonhosted.org/packages/10/f8/dfc9b84d16081239c0b6e3a2896e59db9f8b8617a67b7585e98789942324/moleculekit-0.2.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.0
2023-09-29T07:12:39,145   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/cb/a7/e706e1daa9d60d9ca9a96436564ec0612fe5fc850fdabad6e0c5174d52c5/moleculekit-0.2.1-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,145   Found link https://files.pythonhosted.org/packages/a8/ad/3c01c094324fcaf3a516aa3ab376ae4bec251dc2005f172217368e97b1db/moleculekit-0.2.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.1
2023-09-29T07:12:39,146   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/30/c3/e618404cdeb463f4f5f8fbfa1d5d45a81ea3c31cef86e9c6ca14a3d64589/moleculekit-0.2.2-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,146   Found link https://files.pythonhosted.org/packages/ce/2a/e4f0ea22c4e3be055409fbe8cda7802bd2cd1095926f62f2c78b7f447b46/moleculekit-0.2.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.2
2023-09-29T07:12:39,147   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/3c/c6/baf4c6dafa42a7f055cd29cad8a79b2e99baaf474e8ddcff833e02a8c9a2/moleculekit-0.2.3-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,148   Found link https://files.pythonhosted.org/packages/92/3b/d42fa900fbc359ad0b7806344c2eb303f06336fc6bad439db5550483ce5c/moleculekit-0.2.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.3
2023-09-29T07:12:39,148   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/d7/72/5674ef2a697583774eb66559f23b37026098badcc7e14bb09247c112baec/moleculekit-0.2.4-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,149   Found link https://files.pythonhosted.org/packages/7c/f3/5372063ddc10f57f1ea1aa29ab3f06d98d3d29c22d2a3d0c7c318ff7dc4a/moleculekit-0.2.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.4
2023-09-29T07:12:39,150   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/35/99/9bc21e28d9d4007623055b30fc43d18464649dfa39703ea80e9c32ba4607/moleculekit-0.2.5-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,150   Found link https://files.pythonhosted.org/packages/dd/7a/f6d8ac771d9e4c9117ab098a281231e6c4c3fadbbeafce69ac5b8370f2bd/moleculekit-0.2.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.5
2023-09-29T07:12:39,151   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/97/2d/1b5aeecf49f225f13c39534c7a93181f14bbb295f4b0bb50019d7efda717/moleculekit-0.2.6-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,151   Found link https://files.pythonhosted.org/packages/8a/04/f032c25621eac9ccab21dd25c0cb5d7150a21a5b0cde5ae21adb3e2be933/moleculekit-0.2.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.6
2023-09-29T07:12:39,152   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/7b/c3/6023b75cb8d60607d1932a6f3fa1fee5c99e88b692f25e3ed0072a4812a5/moleculekit-0.2.7-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,152   Found link https://files.pythonhosted.org/packages/a6/68/1eb4fb904763839ec4df4eab490702bd7245a6848ebfb693b165d5fbb153/moleculekit-0.2.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.7
2023-09-29T07:12:39,153   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/a3/85/452591c89b66659eaf24e216aef7818e3061a78bb1fc832f8616808949d4/moleculekit-0.2.8-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,154   Found link https://files.pythonhosted.org/packages/68/e0/0fe1302790061ea9e59370a988d67b877642c45a9e6d725819118cc3aae1/moleculekit-0.2.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.8
2023-09-29T07:12:39,155   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/90/90/238209bf8023d0779c0d4a9592786cc94e69d3dde60b5b17473d57c97b60/moleculekit-0.2.9-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,155   Found link https://files.pythonhosted.org/packages/bd/ad/aa7f2c7343506e17f61f2c4223dc912d4f099fdcc3e1736f393c9c31e118/moleculekit-0.2.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.9
2023-09-29T07:12:39,156   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/40/39/e7c3ea68289cf49ac58a53a55de11c71471a26c55268ce2a11dd3d0f4b1d/moleculekit-0.3.0-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-09-29T07:12:39,156   Found link https://files.pythonhosted.org/packages/9d/1e/99ffa0d73766a735c3e91d591c92537e37b0024cd9b1d745c4e5933563c1/moleculekit-0.3.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.0
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2023-09-29T07:12:39,215   Found link https://files.pythonhosted.org/packages/09/29/7e58bdf57dda487be8ab4c3719ebbf31db17ad65232fc9305a20eaa3c90c/moleculekit-1.1.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.0
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2023-09-29T07:12:39,218   Found link https://files.pythonhosted.org/packages/f4/53/156ee257b5781f55228ef884eec2b57cc368dbf37c4654315347af0e7a71/moleculekit-1.1.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.6
2023-09-29T07:12:39,218   Found link https://files.pythonhosted.org/packages/71/3c/15df00803c890b9d17390a31c60fa2c070a88e8a8c33c79ef10ddf023159/moleculekit-1.1.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.7
2023-09-29T07:12:39,219   Found link https://files.pythonhosted.org/packages/eb/2e/c50f42aefc5f3510073bd5059723baff738a5ee171174441586000c444dc/moleculekit-1.1.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.8
2023-09-29T07:12:39,220   Found link https://files.pythonhosted.org/packages/59/b9/6e9913fc67fa6321d5c441eb59a93e257f1fba383848a6bd645a7d427045/moleculekit-1.1.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.9
2023-09-29T07:12:39,221   Found link https://files.pythonhosted.org/packages/06/90/69685dad023515e231d8da7747793f33c497bb62496c4075e518f230da55/moleculekit-1.2.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.0
2023-09-29T07:12:39,222   Found link https://files.pythonhosted.org/packages/1a/07/36426e9820ea0ecff884e15fc9ebe413735a2b22a9212cdcbb9b62e56744/moleculekit-1.2.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.1
2023-09-29T07:12:39,222   Found link https://files.pythonhosted.org/packages/a1/56/2e1ac2fac4f566abf327baf326d17421047e363138c1c132a537a3eaf5ec/moleculekit-1.2.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.2
2023-09-29T07:12:39,223   Found link https://files.pythonhosted.org/packages/cb/28/b8fa8b94edf207d206627fcb18753ce3fad1450d7d5e5b052daa211b226b/moleculekit-1.2.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.4
2023-09-29T07:12:39,224   Found link https://files.pythonhosted.org/packages/cb/c9/8d7c9c427863a8e1be9e5487520f26a4ea63a34e735a3c5598f1e8b43cb4/moleculekit-1.2.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.5
2023-09-29T07:12:39,224   Found link https://files.pythonhosted.org/packages/39/b3/50e46e2780075c4adf93bba603ad047457f3d9cd70a77f4909776ec446b3/moleculekit-1.2.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.7
2023-09-29T07:12:39,225   Found link https://files.pythonhosted.org/packages/29/f1/10cd916b3024b2efe08c06413dff5938859e01c8bc671cde8bf070758031/moleculekit-1.2.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.8
2023-09-29T07:12:39,225   Found link https://files.pythonhosted.org/packages/47/55/207179562e46a3cba4a1cb813c1754be6c5a1664a11d1dcffe89b51c1ca4/moleculekit-1.2.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.9
2023-09-29T07:12:39,226   Found link https://files.pythonhosted.org/packages/2e/1c/a07b4d5f471fc90ba12e88e44675ddbf0ba4b0a658c2fc014491a7a27092/moleculekit-1.3.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.0
2023-09-29T07:12:39,227   Found link https://files.pythonhosted.org/packages/80/9b/d0375ea58246506494224acf560e8d2da623d1635047089316a01ab146a0/moleculekit-1.3.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.1
2023-09-29T07:12:39,227   Found link https://files.pythonhosted.org/packages/f9/f6/5808fddfaeeb3c021514c45f1b896329245c2e1c6218a86b9bc9f1904d7d/moleculekit-1.3.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.3
2023-09-29T07:12:39,228   Found link https://files.pythonhosted.org/packages/0f/87/45be2661273532639b9aef46f7335ef962ac0f4d5a022cad9fae46b3ed76/moleculekit-1.3.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.4
2023-09-29T07:12:39,229   Found link https://files.pythonhosted.org/packages/0b/c2/d5b36c664c2d4f8736b5dbf06b05d9efeeacd4d488125c8feb0e4efb3594/moleculekit-1.3.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.5
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2023-09-29T07:12:39,230   Found link https://files.pythonhosted.org/packages/1a/fd/3788664397288c8169d713da13ae2419a0534a9ee826d1ce718811e27569/moleculekit-1.3.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.8
2023-09-29T07:12:39,231   Found link https://files.pythonhosted.org/packages/fe/a6/b9b3e9ec27de783731911f111354a9d1e6cd766e47aeff934b769a415311/moleculekit-1.3.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.9
2023-09-29T07:12:39,232   Found link https://files.pythonhosted.org/packages/fd/8d/5420b8fc8713c9a27e74eb85aab9b758169f739c0d6aca1540d73582aba6/moleculekit-1.4.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.0
2023-09-29T07:12:39,232   Found link https://files.pythonhosted.org/packages/68/7e/cd023ea3b0a765a65611a8b103d51dbb55fc97bb9df335095d520ad46deb/moleculekit-1.4.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.1
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2023-09-29T07:12:39,237   Found link https://files.pythonhosted.org/packages/6b/80/69b1d49f78060edafdb9a5e49080f189c6d72a7a2a83f2567f7abfaf9fcb/moleculekit-1.4.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.4.7
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2023-09-29T07:12:39,239   Found link https://files.pythonhosted.org/packages/0b/22/49372d8ecca8baa50e08ca3971786e207825556920bd5b19697d085bf681/moleculekit-1.4.9.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.4.9
2023-09-29T07:12:39,240   Found link https://files.pythonhosted.org/packages/3a/52/c87b6f8651063e38a723e8506788475ecf32f2b2e67fcf42739e8737f120/moleculekit-1.5.0.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.0
2023-09-29T07:12:39,241   Found link https://files.pythonhosted.org/packages/e9/64/50b82745c79e8f28fb8c1615e637221dceb4af565af8e785b04b5c9bd7f0/moleculekit-1.5.1.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.1
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2023-09-29T07:12:39,243   Found link https://files.pythonhosted.org/packages/3f/e8/860f3b89afd29b5ba405ab028f3d49ac22e95557b6b906e475c2f6558df5/moleculekit-1.5.3.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.3
2023-09-29T07:12:39,244   Found link https://files.pythonhosted.org/packages/e7/1e/8f982d3446852e3778250fc8af491eb3ceaf081b891eb7a4936776dfe730/moleculekit-1.5.4.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.4
2023-09-29T07:12:39,245   Found link https://files.pythonhosted.org/packages/46/81/f7be4e086eb469d0fda5d9be51c6fe2107d39c4127f64218774c40f5923a/moleculekit-1.5.5.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.5
2023-09-29T07:12:39,246   Found link https://files.pythonhosted.org/packages/d1/99/5866f661f25b1168804a5c26ab38edd26a7239d91b84c13fb129c1f84ab6/moleculekit-1.5.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.6
2023-09-29T07:12:39,247   Found link https://files.pythonhosted.org/packages/25/45/e228ef66e7b03b1613382490f07c3db31c9713e3878eb9766781076b8209/moleculekit-1.5.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.7
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2023-09-29T07:12:39,249   Found link https://files.pythonhosted.org/packages/00/79/eafaf1a45594ebe0f5e3e3a775bb8e4635dd46e63a048cc577a4e3c4c29b/moleculekit-1.6.0.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.0
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2023-09-29T07:12:39,252   Found link https://files.pythonhosted.org/packages/75/c9/3ed46001d1cc28d02ee2ee30de3377bc39f9545ea0a7b7932b6c31770879/moleculekit-1.6.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.6
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2023-09-29T07:12:39,257   Found link https://files.pythonhosted.org/packages/4e/3a/29fb1aa0e3792fef88348885348370f39af453fb75d5505a208068d1c4ac/moleculekit-1.7.1.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.1
2023-09-29T07:12:39,258   Found link https://files.pythonhosted.org/packages/4a/13/dd6711d592d27e604c48830300f5596aafa1bbc479dc5eb49ed9797085eb/moleculekit-1.7.2.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.2
2023-09-29T07:12:39,258   Found link https://files.pythonhosted.org/packages/c7/cb/205d8925276863e2892c2c1ae2747cd4834cd3f174521172670ce43b50b8/moleculekit-1.7.3.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.3
2023-09-29T07:12:39,259   Found link https://files.pythonhosted.org/packages/6f/9e/2bce5993679a3666fd12803b93bb9a4daa59922f0ecdd26e9726df5d7f73/moleculekit-1.7.4.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.4
2023-09-29T07:12:39,260   Found link https://files.pythonhosted.org/packages/fa/63/993d55964a5afc9417ca31ab06a7d08f10b8fb38c63157bef0f350b4bb49/moleculekit-1.7.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.6
2023-09-29T07:12:39,261   Found link https://files.pythonhosted.org/packages/9b/3d/351d6444550ae455f20139e1d71ab138449c75b4a9782ac831dc9c6daa76/moleculekit-1.7.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.7
2023-09-29T07:12:39,262   Found link https://files.pythonhosted.org/packages/1b/7a/80d740239c506d7eea7cdba7576c503012556338861c10d5d2908e1912f7/moleculekit-1.7.8.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.8
2023-09-29T07:12:39,263   Found link https://files.pythonhosted.org/packages/05/e0/64dd3801f9b9cd011f8093d85201df3b259bab3502b87b6e37edadea0f21/moleculekit-1.7.9.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.9
2023-09-29T07:12:39,264   Found link https://files.pythonhosted.org/packages/0e/fd/650680f6dcf164b179c8a334c56fc7ba97d71519330f03bdc485307b6a0d/moleculekit-1.7.10.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.10
2023-09-29T07:12:39,265   Found link https://files.pythonhosted.org/packages/37/05/3105db0d4a63b49d0f4534b5e9d6a488b96b83b3aac621224338f3a6aa6b/moleculekit-1.7.12.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.12
2023-09-29T07:12:39,266   Found link https://files.pythonhosted.org/packages/08/ec/48d8122fea93c59592ae22dc29f16496087cdf31064793e6da173fcf2e36/moleculekit-1.7.13.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.13
2023-09-29T07:12:39,266   Found link https://files.pythonhosted.org/packages/46/79/442f4846c44e99a4e5d61b09e65cb57ec69b24ae4bf7e8b704f125238c6c/moleculekit-1.7.14.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.14
2023-09-29T07:12:39,267   Found link https://files.pythonhosted.org/packages/fa/fd/aa5c1911df4cf3bee9575fbc1cdbd39bcb1d9164e77c772fa938be672cc0/moleculekit-1.7.15.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.15
2023-09-29T07:12:39,268 Fetching project page and analyzing links: https://www.piwheels.org/simple/moleculekit/
2023-09-29T07:12:39,269 Getting page https://www.piwheels.org/simple/moleculekit/
2023-09-29T07:12:39,270 Found index url https://www.piwheels.org/simple/
2023-09-29T07:12:39,466 Fetched page https://www.piwheels.org/simple/moleculekit/ as text/html
2023-09-29T07:12:39,522   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.7.12-cp311-cp311-linux_armv7l.whl#sha256=353e02925d0653a2d5a2c081631d08e23f3201d97e2e5770509deb27cfab4c86 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
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2023-09-29T07:12:39,530   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.7.7-cp311-cp311-linux_armv6l.whl#sha256=99d446a8f686c6a6b3b321e039b4c0ef6722b3f7c579aa4470096234c6ffa056 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
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2023-09-29T07:12:39,531   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.7.7-cp39-cp39-linux_armv6l.whl#sha256=a91a34606e0519960ade59e824acf3ed04563b9d1e093314a657f5e5670f254f (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
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2023-09-29T07:12:39,532   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.7.6-cp311-cp311-linux_armv6l.whl#sha256=cba33bb1f7fd174a786dccab1bd8419b1f482204ff6a2717471c5b93713435b6 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2023-09-29T07:12:39,533   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.7.6-cp39-cp39-linux_armv7l.whl#sha256=935955b4a24c77b5a9a5559e3b72fc9d7c9e521e45160057a06ad3e2c69cac5e (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2023-09-29T07:12:39,533   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.7.6-cp39-cp39-linux_armv6l.whl#sha256=935955b4a24c77b5a9a5559e3b72fc9d7c9e521e45160057a06ad3e2c69cac5e (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2023-09-29T07:12:39,534   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.7.4-cp311-cp311-linux_armv7l.whl#sha256=27adcded6091a46c83241ecb55d2a6b31825be09fc4a4a5e2db47c3a0bef20f3 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2023-09-29T07:12:39,535   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.7.4-cp311-cp311-linux_armv6l.whl#sha256=27adcded6091a46c83241ecb55d2a6b31825be09fc4a4a5e2db47c3a0bef20f3 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
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2023-09-29T07:12:39,537   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.7.2-cp39-cp39-linux_armv7l.whl#sha256=31a656ec30b0e743f1639a96ea939f219fac66607e81ef0b3fec8c5565b5c4e5 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
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2023-09-29T07:12:39,538   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.7.1-cp39-cp39-linux_armv7l.whl#sha256=4a709125072e966616cab4687628abe581a458fdbc2234358828d3a6c7513cc9 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2023-09-29T07:12:39,539   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.7.1-cp39-cp39-linux_armv6l.whl#sha256=4a709125072e966616cab4687628abe581a458fdbc2234358828d3a6c7513cc9 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2023-09-29T07:12:39,540   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.7.0-cp39-cp39-linux_armv7l.whl#sha256=83df60a6a8f514e5843500501efbab6228edb2005d876850a5442790a072906f (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
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2023-09-29T07:12:39,541   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.6.9-cp39-cp39-linux_armv7l.whl#sha256=8eea0a8d25cabdeab4ef1d22445ddc6a43f97ee7d818844ba405fd13182df906 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
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2023-09-29T07:12:39,559   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.5.0-cp39-cp39-linux_armv6l.whl#sha256=2335de6704a494b118481ac750c91de9befd1a0e12629fd0d7b20ca020ab582f (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2023-09-29T07:12:39,559   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.4.9-cp39-cp39-linux_armv7l.whl#sha256=e8ded20037d22ac419d05d0a80db0081999eac7f92084cd85a24aef997eb56cd (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2023-09-29T07:12:39,560   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.4.9-cp39-cp39-linux_armv6l.whl#sha256=e8ded20037d22ac419d05d0a80db0081999eac7f92084cd85a24aef997eb56cd (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
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2023-09-29T07:12:39,563   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.4.6-cp39-cp39-linux_armv7l.whl#sha256=c81af8eb30e31f41a57d6e31c2e4d4a5a6f85041fe9f79dcd843adf62c919a7a (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
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2023-09-29T07:12:39,564   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.14-cp39-cp39-linux_armv7l.whl#sha256=9462e9f87eb4aec5ac63c9df15de09cdce7d94fe44a0708d7ee525e983ff1830 (from https://www.piwheels.org/simple/moleculekit/)
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2023-09-29T07:12:39,579   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.14-cp37-cp37m-linux_armv7l.whl#sha256=5bc2de8230ca38d840e6f86860f469828a1720a95c76726db1ecb07a8af6de91 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,580   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.14-cp37-cp37m-linux_armv6l.whl#sha256=5bc2de8230ca38d840e6f86860f469828a1720a95c76726db1ecb07a8af6de91 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,580   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.13-cp39-cp39-linux_armv7l.whl#sha256=413233b9ea619a276a0cc4911cee59417c2be694ab30c5c5c836a31391e5b6c4 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,581   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.13-cp39-cp39-linux_armv6l.whl#sha256=413233b9ea619a276a0cc4911cee59417c2be694ab30c5c5c836a31391e5b6c4 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,581   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.13-cp37-cp37m-linux_armv7l.whl#sha256=ef137737db23a1f54c74776c99ac718685db863975d888a3e219900b5874fe45 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,582   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.13-cp37-cp37m-linux_armv6l.whl#sha256=ef137737db23a1f54c74776c99ac718685db863975d888a3e219900b5874fe45 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,582   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.12-cp39-cp39-linux_armv7l.whl#sha256=d75d99aa397ece4f4d163fff8e78e6868ccbab4190016befc567c5f08d1cbbd4 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,583   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.12-cp39-cp39-linux_armv6l.whl#sha256=d75d99aa397ece4f4d163fff8e78e6868ccbab4190016befc567c5f08d1cbbd4 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,583   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.12-cp37-cp37m-linux_armv7l.whl#sha256=a871d3b206f986ddc16b14a1e59904384aea1d6936948be45d6d3d05211637c4 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,584   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.12-cp37-cp37m-linux_armv6l.whl#sha256=a871d3b206f986ddc16b14a1e59904384aea1d6936948be45d6d3d05211637c4 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,585   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp39-cp39-linux_armv7l.whl#sha256=0d0004615c5da8823417816aa8e72f2ac2a2993c01c9ffa07540521dd44cdeb9 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,585   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp39-cp39-linux_armv6l.whl#sha256=0d0004615c5da8823417816aa8e72f2ac2a2993c01c9ffa07540521dd44cdeb9 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,586   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp37-cp37m-linux_armv7l.whl#sha256=66dbff1fb6cecaa00851b6b78480b3d8eb3f5f5d9aae539ad9397ec3dc9b22d8 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,586   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp37-cp37m-linux_armv6l.whl#sha256=66dbff1fb6cecaa00851b6b78480b3d8eb3f5f5d9aae539ad9397ec3dc9b22d8 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,587   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp39-cp39-linux_armv7l.whl#sha256=72aada7099cf1c7fbed38107b64c08622659cb763f35e5f2b75052a08f5cb853 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,587   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp39-cp39-linux_armv6l.whl#sha256=72aada7099cf1c7fbed38107b64c08622659cb763f35e5f2b75052a08f5cb853 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,588   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp37-cp37m-linux_armv7l.whl#sha256=e8d8fc1d3f31a50afae4252a2c403fb5b928eff4452d3954322d0d9b2d5383c5 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,588   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp37-cp37m-linux_armv6l.whl#sha256=e8d8fc1d3f31a50afae4252a2c403fb5b928eff4452d3954322d0d9b2d5383c5 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,589   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp39-cp39-linux_armv7l.whl#sha256=b1bfb9de96ef11fdd768cccd1b894300c470a7389f83c8cca3f42ac636f3dcb7 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,589   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp39-cp39-linux_armv6l.whl#sha256=b1bfb9de96ef11fdd768cccd1b894300c470a7389f83c8cca3f42ac636f3dcb7 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,590   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp37-cp37m-linux_armv7l.whl#sha256=8e98ed7e4f43a05739fbb98f22bc0aeabe5d6a76673b8883a4fa88c3762ba080 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,590   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp37-cp37m-linux_armv6l.whl#sha256=8e98ed7e4f43a05739fbb98f22bc0aeabe5d6a76673b8883a4fa88c3762ba080 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,591   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp39-cp39-linux_armv7l.whl#sha256=de2e9946d86d3e6deb732605b7b9804d3ee229e0d1e869093c26731ff1cf6e49 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,591   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp39-cp39-linux_armv6l.whl#sha256=de2e9946d86d3e6deb732605b7b9804d3ee229e0d1e869093c26731ff1cf6e49 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,592   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp37-cp37m-linux_armv7l.whl#sha256=881a09b6497cca181f77a3388648b0ec90974f79d8c81513666ac38dbed69842 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,592   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp37-cp37m-linux_armv6l.whl#sha256=881a09b6497cca181f77a3388648b0ec90974f79d8c81513666ac38dbed69842 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,593   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp39-cp39-linux_armv7l.whl#sha256=f42eb6c315d3242355c8e36090f1f77ed92b768cefb595178e81eb89fa5a79d5 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,594   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp39-cp39-linux_armv6l.whl#sha256=f42eb6c315d3242355c8e36090f1f77ed92b768cefb595178e81eb89fa5a79d5 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,594   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp37-cp37m-linux_armv7l.whl#sha256=30013f87dd3dc0c9b99cc9862ac0d0be618fe63faa7c7c4623be9cdd86396624 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,594   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp37-cp37m-linux_armv6l.whl#sha256=30013f87dd3dc0c9b99cc9862ac0d0be618fe63faa7c7c4623be9cdd86396624 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,595   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp39-cp39-linux_armv7l.whl#sha256=e123a257574ee84a677c70d154c26fb75cdf29cfb3f9491b309d8ad47e37f3c0 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,596   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp39-cp39-linux_armv6l.whl#sha256=e123a257574ee84a677c70d154c26fb75cdf29cfb3f9491b309d8ad47e37f3c0 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,596   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp37-cp37m-linux_armv7l.whl#sha256=a30adf43b2972eb0763ce00b18dc4dffb61a74ac1da2391652cf53f73dba67ce (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,597   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp37-cp37m-linux_armv6l.whl#sha256=a30adf43b2972eb0763ce00b18dc4dffb61a74ac1da2391652cf53f73dba67ce (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,597   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp39-cp39-linux_armv7l.whl#sha256=c666ea91f79ecf6c6d99ca251e7f938e7e82208a01a91d39b827ba64eee4ce41 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,598   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp39-cp39-linux_armv6l.whl#sha256=c666ea91f79ecf6c6d99ca251e7f938e7e82208a01a91d39b827ba64eee4ce41 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,598   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp37-cp37m-linux_armv7l.whl#sha256=286faceca4683f35ce8e9aeefefdecee1c02150dfc9b7deb62015ce17f3f557c (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,599   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp37-cp37m-linux_armv6l.whl#sha256=286faceca4683f35ce8e9aeefefdecee1c02150dfc9b7deb62015ce17f3f557c (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,599   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp39-cp39-linux_armv7l.whl#sha256=390edc2399f77605c97d9fc8db3b63f282ba297c67fe9514db91ebec945fa2d7 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,600   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp39-cp39-linux_armv6l.whl#sha256=390edc2399f77605c97d9fc8db3b63f282ba297c67fe9514db91ebec945fa2d7 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,600   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp37-cp37m-linux_armv7l.whl#sha256=e7e709fde2552ca5cb602bf420ed89d740b1e75bd32c879ee33ffe3b747b109a (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,601   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp37-cp37m-linux_armv6l.whl#sha256=e7e709fde2552ca5cb602bf420ed89d740b1e75bd32c879ee33ffe3b747b109a (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,601   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp39-cp39-linux_armv7l.whl#sha256=aed227f0c49804421d71b6c949c0d24367a74207b8f855c59e4e73a89b5a93ed (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,602   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp39-cp39-linux_armv6l.whl#sha256=aed227f0c49804421d71b6c949c0d24367a74207b8f855c59e4e73a89b5a93ed (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,602   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp37-cp37m-linux_armv7l.whl#sha256=ad67f1f622d2a2a49358691e3e784e48277aa09cf1f984ed60e847892a3413d7 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,603   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp37-cp37m-linux_armv6l.whl#sha256=ad67f1f622d2a2a49358691e3e784e48277aa09cf1f984ed60e847892a3413d7 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,603   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp39-cp39-linux_armv7l.whl#sha256=7f76858d50e6bb4611f32f053be82003c583d01ad83aa44b6f220dce89a7856f (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,604   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp39-cp39-linux_armv6l.whl#sha256=7f76858d50e6bb4611f32f053be82003c583d01ad83aa44b6f220dce89a7856f (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,605   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp37-cp37m-linux_armv7l.whl#sha256=ab05d1bc06d0d249cbb4871d51e6dca4b9e8474288d86326bd7dd603b9b99820 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,605   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp37-cp37m-linux_armv6l.whl#sha256=ab05d1bc06d0d249cbb4871d51e6dca4b9e8474288d86326bd7dd603b9b99820 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,606   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp39-cp39-linux_armv7l.whl#sha256=0f20a256b92c66dbaac370cf1a01b885b10f1371beacaec65ec35ce8ac935afb (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,606   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp39-cp39-linux_armv6l.whl#sha256=0f20a256b92c66dbaac370cf1a01b885b10f1371beacaec65ec35ce8ac935afb (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,607   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp37-cp37m-linux_armv7l.whl#sha256=34809734c61c1fcc4c4de1857dadfb84e726cbfe0dd0b60fce249166d29a3bb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,607   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp37-cp37m-linux_armv6l.whl#sha256=34809734c61c1fcc4c4de1857dadfb84e726cbfe0dd0b60fce249166d29a3bb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,608   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp39-cp39-linux_armv7l.whl#sha256=a8a1cb7f5b851f5f58273e5d12aa871e5086f6bfd844f33f0b4bf20c83f429ec (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,608   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp39-cp39-linux_armv6l.whl#sha256=a8a1cb7f5b851f5f58273e5d12aa871e5086f6bfd844f33f0b4bf20c83f429ec (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,609   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp37-cp37m-linux_armv7l.whl#sha256=93f57ab9c01697fb9f28ed39e4c5c32828e862bf410f556fdbc43c7a72825cb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,609   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp37-cp37m-linux_armv6l.whl#sha256=93f57ab9c01697fb9f28ed39e4c5c32828e862bf410f556fdbc43c7a72825cb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,610   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp39-cp39-linux_armv7l.whl#sha256=de79a8099ce28793ecc89cf8dfbcb6542a270d00290c96903280f704e2ec22e7 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,610   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp39-cp39-linux_armv6l.whl#sha256=de79a8099ce28793ecc89cf8dfbcb6542a270d00290c96903280f704e2ec22e7 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,611   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp37-cp37m-linux_armv7l.whl#sha256=25d1bdfd25f377e21e8a522d9f3cd2ce3896cf857957c8ec876c69f4de8d53f5 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,611   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp37-cp37m-linux_armv6l.whl#sha256=25d1bdfd25f377e21e8a522d9f3cd2ce3896cf857957c8ec876c69f4de8d53f5 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,612   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp39-cp39-linux_armv7l.whl#sha256=c1983524eecc8638287c4a1e09dda961635e861bf6f9342dc566a9f9a4c0b771 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,612   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp39-cp39-linux_armv6l.whl#sha256=c1983524eecc8638287c4a1e09dda961635e861bf6f9342dc566a9f9a4c0b771 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,613   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp37-cp37m-linux_armv7l.whl#sha256=2d64935710bb05965f486f3bd9f258d8d479dc5c00dc1535ba5e285c8786dcf1 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,614   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp37-cp37m-linux_armv6l.whl#sha256=2d64935710bb05965f486f3bd9f258d8d479dc5c00dc1535ba5e285c8786dcf1 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,614   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp39-cp39-linux_armv7l.whl#sha256=24cfa04ff95ecb68f6d261ba4176e979846a0424ba781a1e314ca233c5206ae7 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,615   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp39-cp39-linux_armv6l.whl#sha256=24cfa04ff95ecb68f6d261ba4176e979846a0424ba781a1e314ca233c5206ae7 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,615   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp37-cp37m-linux_armv7l.whl#sha256=3fa03496ffbd230b85c032f9e1ba3129efbd4c37f6509c6cfef258ce69ed6925 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,616   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp37-cp37m-linux_armv6l.whl#sha256=3fa03496ffbd230b85c032f9e1ba3129efbd4c37f6509c6cfef258ce69ed6925 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,616   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp39-cp39-linux_armv7l.whl#sha256=41b03e81b9cd75c716643741a53b8d4d5aeb1633b5e07091c1a7355b6b44d233 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,617   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp39-cp39-linux_armv6l.whl#sha256=41b03e81b9cd75c716643741a53b8d4d5aeb1633b5e07091c1a7355b6b44d233 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,617   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp37-cp37m-linux_armv7l.whl#sha256=584155aa2ddfa324fcd872934f8b25a296c40b34797209bb754f4a641a5b27eb (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,618   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp37-cp37m-linux_armv6l.whl#sha256=584155aa2ddfa324fcd872934f8b25a296c40b34797209bb754f4a641a5b27eb (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,618   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp39-cp39-linux_armv7l.whl#sha256=1b6361e98ea6ec0f3a7a4cce9ec9569a117c26deb95d0ce2bcea9d6f1f38d503 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,619   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp39-cp39-linux_armv6l.whl#sha256=1b6361e98ea6ec0f3a7a4cce9ec9569a117c26deb95d0ce2bcea9d6f1f38d503 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,619   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp37-cp37m-linux_armv7l.whl#sha256=b0ac5fea57fee9d962de25688ffde053c705daa15588886ea6aa7d5ab0986077 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,620   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp37-cp37m-linux_armv6l.whl#sha256=b0ac5fea57fee9d962de25688ffde053c705daa15588886ea6aa7d5ab0986077 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,620   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.9-cp39-cp39-linux_armv7l.whl#sha256=223cbac9f53d732be3d157f8e68c124c79439d057ec079594c681d7c5327f342 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,621   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.9-cp39-cp39-linux_armv6l.whl#sha256=223cbac9f53d732be3d157f8e68c124c79439d057ec079594c681d7c5327f342 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,621   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.9-cp37-cp37m-linux_armv7l.whl#sha256=a6ee5c9ac5b2648bb87ca08a6491d955004770b58180224d6d24bdb8cec17458 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,622   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.9-cp37-cp37m-linux_armv6l.whl#sha256=a6ee5c9ac5b2648bb87ca08a6491d955004770b58180224d6d24bdb8cec17458 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,622   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp39-cp39-linux_armv7l.whl#sha256=c18e44dbd9cf047134d440ff4fbb18722a3fdb0f348d431e8b7bed7dd398bd6e (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,623   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp39-cp39-linux_armv6l.whl#sha256=c18e44dbd9cf047134d440ff4fbb18722a3fdb0f348d431e8b7bed7dd398bd6e (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,624   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp37-cp37m-linux_armv7l.whl#sha256=19e3b710f4af1a0cb530060979c4216d87f0bd8a71e9f41824cf3565abbcbbdb (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,624   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp37-cp37m-linux_armv6l.whl#sha256=19e3b710f4af1a0cb530060979c4216d87f0bd8a71e9f41824cf3565abbcbbdb (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,625   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.7-cp39-cp39-linux_armv7l.whl#sha256=53a48e2a1781a9ae00e1f905778bad58715b08cff2ed4605148de1e481c9d50e (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,625   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.7-cp39-cp39-linux_armv6l.whl#sha256=53a48e2a1781a9ae00e1f905778bad58715b08cff2ed4605148de1e481c9d50e (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,626   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.7-cp37-cp37m-linux_armv7l.whl#sha256=8e63b6afb6715f46aae20e77b81958cdc652a7b1b6d294c5d559f7f06d5a5106 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,626   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.7-cp37-cp37m-linux_armv6l.whl#sha256=8e63b6afb6715f46aae20e77b81958cdc652a7b1b6d294c5d559f7f06d5a5106 (from https://www.piwheels.org/simple/moleculekit/)
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2023-09-29T07:12:39,639   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.4.7-py3-none-any.whl#sha256=0167204d0c1ad4269753d9981920d6d47d0936fa85f5a709716abe11f2f63924 (from https://www.piwheels.org/simple/moleculekit/)
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2023-09-29T07:12:39,641   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.3.4-py3-none-any.whl#sha256=a5284594c607376665fb0592efa0f7696a9d1b437641b385a939bb6e171e5b58 (from https://www.piwheels.org/simple/moleculekit/)
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2023-09-29T07:12:39,642   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.3.2-py3-none-any.whl#sha256=0f9deb57395d35af8d9e4300bd57eb6fb5537feb62576b4df5611326e007a946 (from https://www.piwheels.org/simple/moleculekit/)
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2023-09-29T07:12:39,643   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.3.0-py3-none-any.whl#sha256=864f229abf24e864927569f3a17c74c39b977d8b7ba63cf2792e71f2c925eebd (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,643   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.2.9-py3-none-any.whl#sha256=76a22c44b710351a9d3c94d7e7c1d96c61e90251004b2a34cdcc92280d423a09 (from https://www.piwheels.org/simple/moleculekit/)
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2023-09-29T07:12:39,645   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.2.6-py3-none-any.whl#sha256=1642c66ce5ad47055acb7eaa76a2c208cf2e5b69c53ba3d24e4b79ebe27dc84d (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,646   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.2.5-py3-none-any.whl#sha256=bc056cd58574a951b4acf332b139c10194619398cd922d83d45906c41aab9c61 (from https://www.piwheels.org/simple/moleculekit/)
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2023-09-29T07:12:39,650   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.29-py3-none-any.whl#sha256=79d2f4b46738f696865e3b5c591afd379add5aa8e1dfc58fbfb58e046e3810f1 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,651   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.27-py3-none-any.whl#sha256=fc3413a0265ea20a77f4167b72a3c80b8b45f7338a57d1f999fba81a45110a38 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,651   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.26-py3-none-any.whl#sha256=fe35ec2f09b9b40631f7b47c1fe463b18166a272776c4c4f839718c50fd62e14 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,652   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.24-py3-none-any.whl#sha256=13d00e3b7c8c41bc82131fa7f6df5c575b3ed0efc89b715f8ee35bb68dbe1b68 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,652   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.23-py3-none-any.whl#sha256=a174c23806ee69677ad74cd6376e8a22f000abcd5817ae7bd67ec2639d750a72 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,653   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.22-py3-none-any.whl#sha256=4bdcc64f301cdd7a24c6f2b0d515152bbde40124568d72b2046003aba6d7d34c (from https://www.piwheels.org/simple/moleculekit/)
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2023-09-29T07:12:39,654   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.19-py3-none-any.whl#sha256=1005a5a682737b1ba3f4858ca3919c129caae8d962bf750308e4cf6e7d37e215 (from https://www.piwheels.org/simple/moleculekit/)
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2023-09-29T07:12:39,658   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.6-py3-none-any.whl#sha256=0a288cd1efd660482dcc967caed02315dd8f02c19a0287eee0b8519d761db1b3 (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,659   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.5-py3-none-any.whl#sha256=2f111e31b3f90e63ca0154c528585208b8bd41a065aa0078325683f4b36eacec (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,660   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.4-py3-none-any.whl#sha256=5784491ff294e145a00311f8239aaa0b92c12605db0508ee3e10469b80d4cadd (from https://www.piwheels.org/simple/moleculekit/)
2023-09-29T07:12:39,660 Skipping link: not a file: https://www.piwheels.org/simple/moleculekit/
2023-09-29T07:12:39,661 Skipping link: not a file: https://pypi.org/simple/moleculekit/
2023-09-29T07:12:39,701 Given no hashes to check 1 links for project 'moleculekit': discarding no candidates
2023-09-29T07:12:39,720 Collecting moleculekit==1.7.13
2023-09-29T07:12:39,722   Created temporary directory: /tmp/pip-unpack-q2le4l8_
2023-09-29T07:12:39,861   Downloading moleculekit-1.7.13.tar.gz (6.2 MB)
2023-09-29T07:12:41,899   Added moleculekit==1.7.13 from https://files.pythonhosted.org/packages/08/ec/48d8122fea93c59592ae22dc29f16496087cdf31064793e6da173fcf2e36/moleculekit-1.7.13.tar.gz to build tracker '/tmp/pip-build-tracker-vw3oeavo'
2023-09-29T07:12:41,907   Created temporary directory: /tmp/pip-build-env-ox479alp
2023-09-29T07:12:41,911   Installing build dependencies: started
2023-09-29T07:12:41,913   Running command pip subprocess to install build dependencies
2023-09-29T07:12:43,509   Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2023-09-29T07:12:44,100   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-29T07:12:45,680   Collecting setuptools
2023-09-29T07:12:45,746     Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.2.2-py3-none-any.whl (807 kB)
2023-09-29T07:12:46,528     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/3a/be/650f9c091ef71cb01d735775d554e068752d3ff63d7943b26316dc401749/numpy-1.21.2.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2023-09-29T07:12:46,536     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/5f/d6/ad58ded26556eaeaa8c971e08b6466f17c4ac4d786cd3d800e26ce59cc01/numpy-1.21.3.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2023-09-29T07:12:46,543     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/fb/48/b0708ebd7718a8933f0d3937513ef8ef2f4f04529f1f66ca86d873043921/numpy-1.21.4.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2023-09-29T07:12:46,550     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/c2/a8/a924a09492bdfee8c2ec3094d0a13f2799800b4fdc9c890738aeeb12c72e/numpy-1.21.5.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2023-09-29T07:12:46,557     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/45/b7/de7b8e67f2232c26af57c205aaad29fe17754f793404f59c8a730c7a191a/numpy-1.21.6.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2023-09-29T07:12:46,962   Collecting numpy>=1.18.5
2023-09-29T07:12:48,080     Using cached https://www.piwheels.org/simple/numpy/numpy-1.25.2-cp311-cp311-linux_armv7l.whl (12.5 MB)
2023-09-29T07:12:50,063   Collecting Cython>=0.29.21
2023-09-29T07:12:50,902     Using cached https://www.piwheels.org/simple/cython/Cython-3.0.2-cp311-cp311-linux_armv7l.whl (11.7 MB)
2023-09-29T07:12:51,319   Collecting toml
2023-09-29T07:12:51,352     Using cached https://www.piwheels.org/simple/toml/toml-0.10.2-py2.py3-none-any.whl (16 kB)
2023-09-29T07:12:51,550   Collecting versioneer[toml]==0.28
2023-09-29T07:12:51,573     Using cached https://www.piwheels.org/simple/versioneer/versioneer-0.28-py3-none-any.whl (45 kB)
2023-09-29T07:12:54,498   Installing collected packages: versioneer, toml, setuptools, numpy, Cython
2023-09-29T07:12:54,535     Creating /tmp/pip-build-env-ox479alp/overlay/local/bin
2023-09-29T07:12:54,538     changing mode of /tmp/pip-build-env-ox479alp/overlay/local/bin/versioneer to 755
2023-09-29T07:13:06,791     changing mode of /tmp/pip-build-env-ox479alp/overlay/local/bin/f2py to 755
2023-09-29T07:13:06,794     changing mode of /tmp/pip-build-env-ox479alp/overlay/local/bin/f2py3 to 755
2023-09-29T07:13:06,796     changing mode of /tmp/pip-build-env-ox479alp/overlay/local/bin/f2py3.11 to 755
2023-09-29T07:13:10,803     changing mode of /tmp/pip-build-env-ox479alp/overlay/local/bin/cygdb to 755
2023-09-29T07:13:10,805     changing mode of /tmp/pip-build-env-ox479alp/overlay/local/bin/cython to 755
2023-09-29T07:13:10,808     changing mode of /tmp/pip-build-env-ox479alp/overlay/local/bin/cythonize to 755
2023-09-29T07:13:10,851   Successfully installed Cython-3.0.2 numpy-1.25.2 setuptools-68.2.2 toml-0.10.2 versioneer-0.28
2023-09-29T07:13:11,782   Installing build dependencies: finished with status 'done'
2023-09-29T07:13:11,786   Getting requirements to build wheel: started
2023-09-29T07:13:11,787   Running command Getting requirements to build wheel
2023-09-29T07:13:48,409   Compiling moleculekit/interactions/hbonds/hbonds.pyx because it depends on /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libcpp/vector.pxd.
2023-09-29T07:13:48,411   Compiling moleculekit/interactions/pipi/pipi.pyx because it depends on /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libcpp/vector.pxd.
2023-09-29T07:13:48,411   Compiling moleculekit/interactions/cationpi/cationpi.pyx because it depends on /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libcpp/vector.pxd.
2023-09-29T07:13:48,412   Compiling moleculekit/interactions/sigmahole/sigmahole.pyx because it depends on /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libcpp/vector.pxd.
2023-09-29T07:13:48,413   Compiling moleculekit/wrapping/wrapping.pyx because it depends on /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libcpp/vector.pxd.
2023-09-29T07:13:48,413   Compiling moleculekit/bondguesser_utils/bondguesser_utils.pyx because it depends on /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libcpp/vector.pxd.
2023-09-29T07:13:48,414   Compiling moleculekit/atomselect_utils/atomselect_utils.pyx because it depends on /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libcpp/vector.pxd.
2023-09-29T07:13:48,414   Compiling moleculekit/distance_utils/distance_utils.pyx because it depends on /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libcpp/vector.pxd.
2023-09-29T07:13:48,415   Compiling moleculekit/occupancy_utils/occupancy_utils.pyx because it depends on /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libcpp/vector.pxd.
2023-09-29T07:13:48,416   Compiling moleculekit/xtc_utils/xtc.pyx because it depends on /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libc/string.pxd.
2023-09-29T07:13:48,416   Compiling moleculekit/tmalign/tmalign_util.pyx because it depends on /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libcpp/vector.pxd.
2023-09-29T07:13:48,417   [ 1/11] Cythonizing moleculekit/atomselect_utils/atomselect_utils.pyx
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2023-09-29T07:13:48,418   [ 4/11] Cythonizing moleculekit/interactions/cationpi/cationpi.pyx
2023-09-29T07:13:48,419   [ 5/11] Cythonizing moleculekit/interactions/hbonds/hbonds.pyx
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2023-09-29T07:13:48,421   [ 8/11] Cythonizing moleculekit/occupancy_utils/occupancy_utils.pyx
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2023-09-29T07:13:48,423   [11/11] Cythonizing moleculekit/xtc_utils/xtc.pyx
2023-09-29T07:13:48,914   running egg_info
2023-09-29T07:13:48,920   writing moleculekit.egg-info/PKG-INFO
2023-09-29T07:13:48,924   writing dependency_links to moleculekit.egg-info/dependency_links.txt
2023-09-29T07:13:48,926   writing requirements to moleculekit.egg-info/requires.txt
2023-09-29T07:13:48,928   writing top-level names to moleculekit.egg-info/top_level.txt
2023-09-29T07:13:48,951   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,951   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,952   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,952   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,953   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,954   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,954   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,955   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,955   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,956   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,956   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,957   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,958   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,958   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,959   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,960   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,960   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,961   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
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2023-09-29T07:13:48,962   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,963   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
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2023-09-29T07:13:48,964   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,964   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,964   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
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2023-09-29T07:13:48,966   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,967   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
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2023-09-29T07:13:48,968   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,969   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
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2023-09-29T07:13:48,970   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,970   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,971   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,972   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,972   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,973   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,973   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,974   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
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2023-09-29T07:13:48,975   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
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2023-09-29T07:13:48,980   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,981   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:48,985   reading manifest file 'moleculekit.egg-info/SOURCES.txt'
2023-09-29T07:13:49,015   reading manifest template 'MANIFEST.in'
2023-09-29T07:13:49,257   no previously-included directories found matching 'moleculekit/test-data'
2023-09-29T07:13:49,258   no previously-included directories found matching 'moleculekit/tests'
2023-09-29T07:13:49,259   no previously-included directories found matching 'package'
2023-09-29T07:13:49,260   adding license file 'LICENSE'
2023-09-29T07:13:49,274   writing manifest file 'moleculekit.egg-info/SOURCES.txt'
2023-09-29T07:13:50,458   Getting requirements to build wheel: finished with status 'done'
2023-09-29T07:13:50,473   Installing backend dependencies: started
2023-09-29T07:13:50,474   Running command pip subprocess to install backend dependencies
2023-09-29T07:13:51,700   Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2023-09-29T07:13:52,262   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-29T07:13:52,777   Collecting wheel
2023-09-29T07:13:52,799     Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB)
2023-09-29T07:13:55,024   Installing collected packages: wheel
2023-09-29T07:13:55,250     Creating /tmp/pip-build-env-ox479alp/normal/local/bin
2023-09-29T07:13:55,252     changing mode of /tmp/pip-build-env-ox479alp/normal/local/bin/wheel to 755
2023-09-29T07:13:55,263   Successfully installed wheel-0.41.2
2023-09-29T07:13:55,801   Installing backend dependencies: finished with status 'done'
2023-09-29T07:13:55,803   Created temporary directory: /tmp/pip-modern-metadata-j6g6wfie
2023-09-29T07:13:55,805   Preparing metadata (pyproject.toml): started
2023-09-29T07:13:55,806   Running command Preparing metadata (pyproject.toml)
2023-09-29T07:13:58,092   running dist_info
2023-09-29T07:13:58,094   creating /tmp/pip-modern-metadata-j6g6wfie/moleculekit.egg-info
2023-09-29T07:13:58,100   writing /tmp/pip-modern-metadata-j6g6wfie/moleculekit.egg-info/PKG-INFO
2023-09-29T07:13:58,104   writing dependency_links to /tmp/pip-modern-metadata-j6g6wfie/moleculekit.egg-info/dependency_links.txt
2023-09-29T07:13:58,106   writing requirements to /tmp/pip-modern-metadata-j6g6wfie/moleculekit.egg-info/requires.txt
2023-09-29T07:13:58,107   writing top-level names to /tmp/pip-modern-metadata-j6g6wfie/moleculekit.egg-info/top_level.txt
2023-09-29T07:13:58,108   writing manifest file '/tmp/pip-modern-metadata-j6g6wfie/moleculekit.egg-info/SOURCES.txt'
2023-09-29T07:13:58,133   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,134   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,135   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,135   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,136   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,136   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,137   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,138   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,138   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,139   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,139   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,140   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,140   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,140   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,141   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,141   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,142   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,143   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,143   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,144   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,144   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,145   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,145   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,146   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,147   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,147   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,148   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,149   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,149   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,149   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,150   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,150   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,151   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,151   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,152   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,152   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,153   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,154   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,154   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,155   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,155   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,156   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,156   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,157   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,158   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,158   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,158   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,159   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,159   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,160   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,160   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,160   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,161   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,161   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,162   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:13:58,162   reading manifest file '/tmp/pip-modern-metadata-j6g6wfie/moleculekit.egg-info/SOURCES.txt'
2023-09-29T07:13:58,163   reading manifest template 'MANIFEST.in'
2023-09-29T07:13:58,680   no previously-included directories found matching 'moleculekit/test-data'
2023-09-29T07:13:58,681   no previously-included directories found matching 'moleculekit/tests'
2023-09-29T07:13:58,682   no previously-included directories found matching 'package'
2023-09-29T07:13:58,683   adding license file 'LICENSE'
2023-09-29T07:13:58,693   writing manifest file '/tmp/pip-modern-metadata-j6g6wfie/moleculekit.egg-info/SOURCES.txt'
2023-09-29T07:13:58,701   creating '/tmp/pip-modern-metadata-j6g6wfie/moleculekit-1.7.13.dist-info'
2023-09-29T07:13:58,930   Preparing metadata (pyproject.toml): finished with status 'done'
2023-09-29T07:13:58,935   Source in /tmp/pip-wheel-nvpgn8vf/moleculekit_9ebd550c7aad48b2b09a31d605abed78 has version 1.7.13, which satisfies requirement moleculekit==1.7.13 from https://files.pythonhosted.org/packages/08/ec/48d8122fea93c59592ae22dc29f16496087cdf31064793e6da173fcf2e36/moleculekit-1.7.13.tar.gz
2023-09-29T07:13:58,936   Removed moleculekit==1.7.13 from https://files.pythonhosted.org/packages/08/ec/48d8122fea93c59592ae22dc29f16496087cdf31064793e6da173fcf2e36/moleculekit-1.7.13.tar.gz from build tracker '/tmp/pip-build-tracker-vw3oeavo'
2023-09-29T07:13:58,942 Created temporary directory: /tmp/pip-unpack-s3livpt1
2023-09-29T07:13:58,943 Created temporary directory: /tmp/pip-unpack-jqqsj0tb
2023-09-29T07:13:58,952 Building wheels for collected packages: moleculekit
2023-09-29T07:13:58,957   Created temporary directory: /tmp/pip-wheel-nznox26u
2023-09-29T07:13:58,957   Destination directory: /tmp/pip-wheel-nznox26u
2023-09-29T07:13:58,959   Building wheel for moleculekit (pyproject.toml): started
2023-09-29T07:13:58,962   Running command Building wheel for moleculekit (pyproject.toml)
2023-09-29T07:14:01,092   running bdist_wheel
2023-09-29T07:14:01,107   running build
2023-09-29T07:14:01,108   running build_py
2023-09-29T07:14:01,114   creating build
2023-09-29T07:14:01,115   creating build/lib.linux-armv7l-cpython-311
2023-09-29T07:14:01,116   creating build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-29T07:14:01,117   copying moleculekit/molecule.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-29T07:14:01,121   copying moleculekit/periodictable.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-29T07:14:01,123   copying moleculekit/writers.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-29T07:14:01,126   copying moleculekit/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-29T07:14:01,128   copying moleculekit/dihedral.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-29T07:14:01,130   copying moleculekit/home.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-29T07:14:01,131   copying moleculekit/opm.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-29T07:14:01,134   copying moleculekit/vmdviewer.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-29T07:14:01,137   copying moleculekit/rcsb.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-29T07:14:01,138   copying moleculekit/_version.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-29T07:14:01,140   copying moleculekit/viewer.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-29T07:14:01,142   copying moleculekit/align.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-29T07:14:01,144   copying moleculekit/rdkitintegration.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-29T07:14:01,146   copying moleculekit/pymolgraphics.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-29T07:14:01,147   copying moleculekit/vmdgraphics.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-29T07:14:01,150   copying moleculekit/config.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-29T07:14:01,151   copying moleculekit/version.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-29T07:14:01,153   copying moleculekit/bondguesser.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-29T07:14:01,155   copying moleculekit/util.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-29T07:14:01,158   copying moleculekit/readers.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-29T07:14:01,163   copying moleculekit/distance.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-29T07:14:01,166   creating build/lib.linux-armv7l-cpython-311/moleculekit/pdbx
2023-09-29T07:14:01,166   copying moleculekit/pdbx/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx
2023-09-29T07:14:01,169   creating build/lib.linux-armv7l-cpython-311/moleculekit/atomselect
2023-09-29T07:14:01,170   copying moleculekit/atomselect/analyze.py -> build/lib.linux-armv7l-cpython-311/moleculekit/atomselect
2023-09-29T07:14:01,172   copying moleculekit/atomselect/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/atomselect
2023-09-29T07:14:01,173   copying moleculekit/atomselect/atomselect.py -> build/lib.linux-armv7l-cpython-311/moleculekit/atomselect
2023-09-29T07:14:01,176   copying moleculekit/atomselect/languageparser.py -> build/lib.linux-armv7l-cpython-311/moleculekit/atomselect
2023-09-29T07:14:01,179   creating build/lib.linux-armv7l-cpython-311/moleculekit/smallmol
2023-09-29T07:14:01,180   copying moleculekit/smallmol/smallmol.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol
2023-09-29T07:14:01,184   copying moleculekit/smallmol/test_smallmollib.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol
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2023-09-29T07:14:01,188   copying moleculekit/smallmol/smallmollib.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol
2023-09-29T07:14:01,190   copying moleculekit/smallmol/util.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol
2023-09-29T07:14:01,192   copying moleculekit/smallmol/test_smallmol.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol
2023-09-29T07:14:01,196   creating build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-09-29T07:14:01,197   copying moleculekit/tools/preparation.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-09-29T07:14:01,200   copying moleculekit/tools/preparation_customres.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-09-29T07:14:01,203   copying moleculekit/tools/graphalignment.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-09-29T07:14:01,205   copying moleculekit/tools/detect.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-09-29T07:14:01,207   copying moleculekit/tools/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-09-29T07:14:01,209   copying moleculekit/tools/voxeldescriptors.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-09-29T07:14:01,211   copying moleculekit/tools/sequencestructuralalignment.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-09-29T07:14:01,214   copying moleculekit/tools/moleculechecks.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-09-29T07:14:01,216   copying moleculekit/tools/docking.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-09-29T07:14:01,218   copying moleculekit/tools/atomtyper.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-09-29T07:14:01,220   copying moleculekit/tools/hhblitsprofile.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-09-29T07:14:01,222   copying moleculekit/tools/crystalpacking.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-09-29T07:14:01,224   copying moleculekit/tools/autosegment.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-09-29T07:14:01,227   creating build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-29T07:14:01,228   copying moleculekit/projections/metricdistance.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-29T07:14:01,232   copying moleculekit/projections/metricsecondarystructure.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-29T07:14:01,234   copying moleculekit/projections/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-29T07:14:01,236   copying moleculekit/projections/metricdihedral.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-29T07:14:01,238   copying moleculekit/projections/metricshell.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-29T07:14:01,240   copying moleculekit/projections/projection.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-29T07:14:01,242   copying moleculekit/projections/metricrmsd.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-29T07:14:01,244   copying moleculekit/projections/metricplumed2.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-29T07:14:01,247   copying moleculekit/projections/metricsasa.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-29T07:14:01,249   copying moleculekit/projections/metricsphericalcoordinate.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-29T07:14:01,251   copying moleculekit/projections/metrictmscore.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-29T07:14:01,254   copying moleculekit/projections/metricgyration.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-29T07:14:01,256   copying moleculekit/projections/util.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-29T07:14:01,258   copying moleculekit/projections/metricfluctuation.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-29T07:14:01,260   copying moleculekit/projections/metriccoordinate.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-09-29T07:14:01,263   creating build/lib.linux-armv7l-cpython-311/moleculekit/interactions
2023-09-29T07:14:01,264   copying moleculekit/interactions/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions
2023-09-29T07:14:01,266   copying moleculekit/interactions/interactions.py -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions
2023-09-29T07:14:01,269   creating build/lib.linux-armv7l-cpython-311/moleculekit/ply
2023-09-29T07:14:01,270   copying moleculekit/ply/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/ply
2023-09-29T07:14:01,271   copying moleculekit/ply/yacc.py -> build/lib.linux-armv7l-cpython-311/moleculekit/ply
2023-09-29T07:14:01,276   copying moleculekit/ply/lex.py -> build/lib.linux-armv7l-cpython-311/moleculekit/ply
2023-09-29T07:14:01,280   creating build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader
2023-09-29T07:14:01,281   copying moleculekit/pdbx/reader/PdbxReader.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader
2023-09-29T07:14:01,283   copying moleculekit/pdbx/reader/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader
2023-09-29T07:14:01,284   copying moleculekit/pdbx/reader/PdbxContainers.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader
2023-09-29T07:14:01,287   copying moleculekit/pdbx/reader/PdbxParser.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader
2023-09-29T07:14:01,290   creating build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests
2023-09-29T07:14:01,291   copying moleculekit/pdbx/tests/PdbxReadWriteTests.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests
2023-09-29T07:14:01,293   copying moleculekit/pdbx/tests/PdbxReaderTests.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests
2023-09-29T07:14:01,295   copying moleculekit/pdbx/tests/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests
2023-09-29T07:14:01,297   copying moleculekit/pdbx/tests/PdbxWriterTests.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests
2023-09-29T07:14:01,299   creating build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/writer
2023-09-29T07:14:01,300   copying moleculekit/pdbx/writer/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/writer
2023-09-29T07:14:01,302   copying moleculekit/pdbx/writer/PdbxWriter.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/writer
2023-09-29T07:14:01,305   creating build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools
2023-09-29T07:14:01,306   copying moleculekit/smallmol/tools/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools
2023-09-29T07:14:01,307   copying moleculekit/smallmol/tools/test_tools.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools
2023-09-29T07:14:01,309   copying moleculekit/smallmol/tools/restrainedembed.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools
2023-09-29T07:14:01,311   copying moleculekit/smallmol/tools/clustering.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools
2023-09-29T07:14:01,314   creating build/lib.linux-armv7l-cpython-311/moleculekit/tools/obabel_tools
2023-09-29T07:14:01,315   copying moleculekit/tools/obabel_tools/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools/obabel_tools
2023-09-29T07:14:01,317   copying moleculekit/tools/obabel_tools/obabel_cli.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools/obabel_tools
2023-09-29T07:14:01,318   running egg_info
2023-09-29T07:14:01,323   writing moleculekit.egg-info/PKG-INFO
2023-09-29T07:14:01,326   writing dependency_links to moleculekit.egg-info/dependency_links.txt
2023-09-29T07:14:01,328   writing requirements to moleculekit.egg-info/requires.txt
2023-09-29T07:14:01,328   writing top-level names to moleculekit.egg-info/top_level.txt
2023-09-29T07:14:01,340   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,340   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,341   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,341   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,342   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,342   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,343   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,343   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,344   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,344   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,345   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,346   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,347   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,347   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,348   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,349   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,349   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,350   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,351   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,351   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,352   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,352   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,353   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,353   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,354   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,354   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,355   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,355   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,356   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,356   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,357   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,357   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,358   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,358   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,359   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,359   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,360   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,361   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,361   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,362   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,362   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,362   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,363   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,363   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,364   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,364   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,365   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,365   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,366   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,366   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,367   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,368   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,368   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,369   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,369   dependency /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-29T07:14:01,370   reading manifest file 'moleculekit.egg-info/SOURCES.txt'
2023-09-29T07:14:01,370   reading manifest template 'MANIFEST.in'
2023-09-29T07:14:01,613   no previously-included directories found matching 'moleculekit/test-data'
2023-09-29T07:14:01,614   no previously-included directories found matching 'moleculekit/tests'
2023-09-29T07:14:01,615   no previously-included directories found matching 'package'
2023-09-29T07:14:01,616   adding license file 'LICENSE'
2023-09-29T07:14:01,629   writing manifest file 'moleculekit.egg-info/SOURCES.txt'
2023-09-29T07:14:01,638   /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.atomselect_utils' is absent from the `packages` configuration.
2023-09-29T07:14:01,638   !!

2023-09-29T07:14:01,639           ********************************************************************************
2023-09-29T07:14:01,640           ############################
2023-09-29T07:14:01,640           # Package would be ignored #
2023-09-29T07:14:01,641           ############################
2023-09-29T07:14:01,641           Python recognizes 'moleculekit.atomselect_utils' as an importable package[^1],
2023-09-29T07:14:01,642           but it is absent from setuptools' `packages` configuration.

2023-09-29T07:14:01,643           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T07:14:01,644           package, please make sure that 'moleculekit.atomselect_utils' is explicitly added
2023-09-29T07:14:01,644           to the `packages` configuration field.

2023-09-29T07:14:01,645           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T07:14:01,646           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T07:14:01,646           instead of `find_packages(...)`/`find:`).

2023-09-29T07:14:01,647           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T07:14:01,648           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T07:14:01,650           If you don't want 'moleculekit.atomselect_utils' to be distributed and are
2023-09-29T07:14:01,650           already explicitly excluding 'moleculekit.atomselect_utils' via
2023-09-29T07:14:01,651           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T07:14:01,651           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T07:14:01,652           combination with a more fine grained `package-data` configuration.

2023-09-29T07:14:01,653           You can read more about "package data files" on setuptools documentation page:

2023-09-29T07:14:01,654           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T07:14:01,656           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T07:14:01,657                 even if it does not contain any `.py` files.
2023-09-29T07:14:01,657                 On the other hand, currently there is no concept of package data
2023-09-29T07:14:01,658                 directory, all directories are treated like packages.
2023-09-29T07:14:01,658           ********************************************************************************

2023-09-29T07:14:01,660   !!
2023-09-29T07:14:01,660     check.warn(importable)
2023-09-29T07:14:01,661   /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.bondguesser_utils' is absent from the `packages` configuration.
2023-09-29T07:14:01,662   !!

2023-09-29T07:14:01,663           ********************************************************************************
2023-09-29T07:14:01,664           ############################
2023-09-29T07:14:01,665           # Package would be ignored #
2023-09-29T07:14:01,665           ############################
2023-09-29T07:14:01,666           Python recognizes 'moleculekit.bondguesser_utils' as an importable package[^1],
2023-09-29T07:14:01,666           but it is absent from setuptools' `packages` configuration.

2023-09-29T07:14:01,667           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T07:14:01,668           package, please make sure that 'moleculekit.bondguesser_utils' is explicitly added
2023-09-29T07:14:01,669           to the `packages` configuration field.

2023-09-29T07:14:01,669           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T07:14:01,670           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T07:14:01,670           instead of `find_packages(...)`/`find:`).

2023-09-29T07:14:01,671           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T07:14:01,672           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T07:14:01,672           If you don't want 'moleculekit.bondguesser_utils' to be distributed and are
2023-09-29T07:14:01,673           already explicitly excluding 'moleculekit.bondguesser_utils' via
2023-09-29T07:14:01,673           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T07:14:01,674           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T07:14:01,674           combination with a more fine grained `package-data` configuration.

2023-09-29T07:14:01,675           You can read more about "package data files" on setuptools documentation page:

2023-09-29T07:14:01,676           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T07:14:01,678           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T07:14:01,678                 even if it does not contain any `.py` files.
2023-09-29T07:14:01,679                 On the other hand, currently there is no concept of package data
2023-09-29T07:14:01,679                 directory, all directories are treated like packages.
2023-09-29T07:14:01,680           ********************************************************************************

2023-09-29T07:14:01,681   !!
2023-09-29T07:14:01,681     check.warn(importable)
2023-09-29T07:14:01,682   /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.distance_utils' is absent from the `packages` configuration.
2023-09-29T07:14:01,682   !!

2023-09-29T07:14:01,683           ********************************************************************************
2023-09-29T07:14:01,684           ############################
2023-09-29T07:14:01,685           # Package would be ignored #
2023-09-29T07:14:01,685           ############################
2023-09-29T07:14:01,686           Python recognizes 'moleculekit.distance_utils' as an importable package[^1],
2023-09-29T07:14:01,686           but it is absent from setuptools' `packages` configuration.

2023-09-29T07:14:01,687           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T07:14:01,688           package, please make sure that 'moleculekit.distance_utils' is explicitly added
2023-09-29T07:14:01,688           to the `packages` configuration field.

2023-09-29T07:14:01,689           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T07:14:01,690           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T07:14:01,691           instead of `find_packages(...)`/`find:`).

2023-09-29T07:14:01,692           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T07:14:01,694           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T07:14:01,704           If you don't want 'moleculekit.distance_utils' to be distributed and are
2023-09-29T07:14:01,710           already explicitly excluding 'moleculekit.distance_utils' via
2023-09-29T07:14:01,712           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T07:14:01,713           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T07:14:01,713           combination with a more fine grained `package-data` configuration.

2023-09-29T07:14:01,714           You can read more about "package data files" on setuptools documentation page:

2023-09-29T07:14:01,715           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T07:14:01,717           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T07:14:01,717                 even if it does not contain any `.py` files.
2023-09-29T07:14:01,718                 On the other hand, currently there is no concept of package data
2023-09-29T07:14:01,718                 directory, all directories are treated like packages.
2023-09-29T07:14:01,719           ********************************************************************************

2023-09-29T07:14:01,720   !!
2023-09-29T07:14:01,720     check.warn(importable)
2023-09-29T07:14:01,721   /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.interactions.cationpi' is absent from the `packages` configuration.
2023-09-29T07:14:01,721   !!

2023-09-29T07:14:01,722           ********************************************************************************
2023-09-29T07:14:01,723           ############################
2023-09-29T07:14:01,724           # Package would be ignored #
2023-09-29T07:14:01,724           ############################
2023-09-29T07:14:01,725           Python recognizes 'moleculekit.interactions.cationpi' as an importable package[^1],
2023-09-29T07:14:01,725           but it is absent from setuptools' `packages` configuration.

2023-09-29T07:14:01,727           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T07:14:01,728           package, please make sure that 'moleculekit.interactions.cationpi' is explicitly added
2023-09-29T07:14:01,734           to the `packages` configuration field.

2023-09-29T07:14:01,744           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T07:14:01,744           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T07:14:01,745           instead of `find_packages(...)`/`find:`).

2023-09-29T07:14:01,747           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T07:14:01,749           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T07:14:01,750           If you don't want 'moleculekit.interactions.cationpi' to be distributed and are
2023-09-29T07:14:01,750           already explicitly excluding 'moleculekit.interactions.cationpi' via
2023-09-29T07:14:01,751           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T07:14:01,751           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T07:14:01,752           combination with a more fine grained `package-data` configuration.

2023-09-29T07:14:01,753           You can read more about "package data files" on setuptools documentation page:

2023-09-29T07:14:01,754           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T07:14:01,756           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T07:14:01,756                 even if it does not contain any `.py` files.
2023-09-29T07:14:01,757                 On the other hand, currently there is no concept of package data
2023-09-29T07:14:01,757                 directory, all directories are treated like packages.
2023-09-29T07:14:01,758           ********************************************************************************

2023-09-29T07:14:01,771   !!
2023-09-29T07:14:01,773     check.warn(importable)
2023-09-29T07:14:01,774   /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.interactions.hbonds' is absent from the `packages` configuration.
2023-09-29T07:14:01,775   !!

2023-09-29T07:14:01,776           ********************************************************************************
2023-09-29T07:14:01,776           ############################
2023-09-29T07:14:01,776           # Package would be ignored #
2023-09-29T07:14:01,777           ############################
2023-09-29T07:14:01,778           Python recognizes 'moleculekit.interactions.hbonds' as an importable package[^1],
2023-09-29T07:14:01,778           but it is absent from setuptools' `packages` configuration.

2023-09-29T07:14:01,779           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T07:14:01,779           package, please make sure that 'moleculekit.interactions.hbonds' is explicitly added
2023-09-29T07:14:01,780           to the `packages` configuration field.

2023-09-29T07:14:01,780           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T07:14:01,781           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T07:14:01,781           instead of `find_packages(...)`/`find:`).

2023-09-29T07:14:01,782           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T07:14:01,783           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T07:14:01,784           If you don't want 'moleculekit.interactions.hbonds' to be distributed and are
2023-09-29T07:14:01,785           already explicitly excluding 'moleculekit.interactions.hbonds' via
2023-09-29T07:14:01,785           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T07:14:01,786           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T07:14:01,786           combination with a more fine grained `package-data` configuration.

2023-09-29T07:14:01,793           You can read more about "package data files" on setuptools documentation page:

2023-09-29T07:14:01,801           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T07:14:01,803           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T07:14:01,803                 even if it does not contain any `.py` files.
2023-09-29T07:14:01,804                 On the other hand, currently there is no concept of package data
2023-09-29T07:14:01,805                 directory, all directories are treated like packages.
2023-09-29T07:14:01,805           ********************************************************************************

2023-09-29T07:14:01,806   !!
2023-09-29T07:14:01,807     check.warn(importable)
2023-09-29T07:14:01,808   /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.interactions.pipi' is absent from the `packages` configuration.
2023-09-29T07:14:01,808   !!

2023-09-29T07:14:01,809           ********************************************************************************
2023-09-29T07:14:01,810           ############################
2023-09-29T07:14:01,810           # Package would be ignored #
2023-09-29T07:14:01,811           ############################
2023-09-29T07:14:01,811           Python recognizes 'moleculekit.interactions.pipi' as an importable package[^1],
2023-09-29T07:14:01,812           but it is absent from setuptools' `packages` configuration.

2023-09-29T07:14:01,813           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T07:14:01,813           package, please make sure that 'moleculekit.interactions.pipi' is explicitly added
2023-09-29T07:14:01,814           to the `packages` configuration field.

2023-09-29T07:14:01,815           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T07:14:01,815           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T07:14:01,816           instead of `find_packages(...)`/`find:`).

2023-09-29T07:14:01,817           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T07:14:01,817           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T07:14:01,819           If you don't want 'moleculekit.interactions.pipi' to be distributed and are
2023-09-29T07:14:01,819           already explicitly excluding 'moleculekit.interactions.pipi' via
2023-09-29T07:14:01,820           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T07:14:01,821           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T07:14:01,821           combination with a more fine grained `package-data` configuration.

2023-09-29T07:14:01,823           You can read more about "package data files" on setuptools documentation page:

2023-09-29T07:14:01,824           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T07:14:01,825           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T07:14:01,825                 even if it does not contain any `.py` files.
2023-09-29T07:14:01,826                 On the other hand, currently there is no concept of package data
2023-09-29T07:14:01,826                 directory, all directories are treated like packages.
2023-09-29T07:14:01,827           ********************************************************************************

2023-09-29T07:14:01,828   !!
2023-09-29T07:14:01,829     check.warn(importable)
2023-09-29T07:14:01,829   /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.interactions.sigmahole' is absent from the `packages` configuration.
2023-09-29T07:14:01,830   !!

2023-09-29T07:14:01,831           ********************************************************************************
2023-09-29T07:14:01,831           ############################
2023-09-29T07:14:01,832           # Package would be ignored #
2023-09-29T07:14:01,832           ############################
2023-09-29T07:14:01,833           Python recognizes 'moleculekit.interactions.sigmahole' as an importable package[^1],
2023-09-29T07:14:01,833           but it is absent from setuptools' `packages` configuration.

2023-09-29T07:14:01,834           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T07:14:01,835           package, please make sure that 'moleculekit.interactions.sigmahole' is explicitly added
2023-09-29T07:14:01,836           to the `packages` configuration field.

2023-09-29T07:14:01,837           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T07:14:01,838           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T07:14:01,839           instead of `find_packages(...)`/`find:`).

2023-09-29T07:14:01,840           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T07:14:01,841           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T07:14:01,843           If you don't want 'moleculekit.interactions.sigmahole' to be distributed and are
2023-09-29T07:14:01,844           already explicitly excluding 'moleculekit.interactions.sigmahole' via
2023-09-29T07:14:01,844           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T07:14:01,845           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T07:14:01,845           combination with a more fine grained `package-data` configuration.

2023-09-29T07:14:01,847           You can read more about "package data files" on setuptools documentation page:

2023-09-29T07:14:01,848           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T07:14:01,849           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T07:14:01,849                 even if it does not contain any `.py` files.
2023-09-29T07:14:01,850                 On the other hand, currently there is no concept of package data
2023-09-29T07:14:01,850                 directory, all directories are treated like packages.
2023-09-29T07:14:01,850           ********************************************************************************

2023-09-29T07:14:01,851   !!
2023-09-29T07:14:01,852     check.warn(importable)
2023-09-29T07:14:01,852   /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.occupancy_utils' is absent from the `packages` configuration.
2023-09-29T07:14:01,853   !!

2023-09-29T07:14:01,853           ********************************************************************************
2023-09-29T07:14:01,854           ############################
2023-09-29T07:14:01,854           # Package would be ignored #
2023-09-29T07:14:01,855           ############################
2023-09-29T07:14:01,855           Python recognizes 'moleculekit.occupancy_utils' as an importable package[^1],
2023-09-29T07:14:01,856           but it is absent from setuptools' `packages` configuration.

2023-09-29T07:14:01,857           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T07:14:01,858           package, please make sure that 'moleculekit.occupancy_utils' is explicitly added
2023-09-29T07:14:01,858           to the `packages` configuration field.

2023-09-29T07:14:01,860           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T07:14:01,860           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T07:14:01,861           instead of `find_packages(...)`/`find:`).

2023-09-29T07:14:01,862           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T07:14:01,864           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T07:14:01,865           If you don't want 'moleculekit.occupancy_utils' to be distributed and are
2023-09-29T07:14:01,866           already explicitly excluding 'moleculekit.occupancy_utils' via
2023-09-29T07:14:01,867           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T07:14:01,867           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T07:14:01,868           combination with a more fine grained `package-data` configuration.

2023-09-29T07:14:01,869           You can read more about "package data files" on setuptools documentation page:

2023-09-29T07:14:01,870           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T07:14:01,890           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T07:14:01,893                 even if it does not contain any `.py` files.
2023-09-29T07:14:01,898                 On the other hand, currently there is no concept of package data
2023-09-29T07:14:01,907                 directory, all directories are treated like packages.
2023-09-29T07:14:01,916           ********************************************************************************

2023-09-29T07:14:01,948   !!
2023-09-29T07:14:01,965     check.warn(importable)
2023-09-29T07:14:01,996   /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.share' is absent from the `packages` configuration.
2023-09-29T07:14:02,009   !!

2023-09-29T07:14:02,015           ********************************************************************************
2023-09-29T07:14:02,015           ############################
2023-09-29T07:14:02,016           # Package would be ignored #
2023-09-29T07:14:02,016           ############################
2023-09-29T07:14:02,017           Python recognizes 'moleculekit.share' as an importable package[^1],
2023-09-29T07:14:02,017           but it is absent from setuptools' `packages` configuration.

2023-09-29T07:14:02,018           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T07:14:02,018           package, please make sure that 'moleculekit.share' is explicitly added
2023-09-29T07:14:02,019           to the `packages` configuration field.

2023-09-29T07:14:02,019           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T07:14:02,020           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T07:14:02,020           instead of `find_packages(...)`/`find:`).

2023-09-29T07:14:02,022           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T07:14:02,023           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T07:14:02,024           If you don't want 'moleculekit.share' to be distributed and are
2023-09-29T07:14:02,024           already explicitly excluding 'moleculekit.share' via
2023-09-29T07:14:02,025           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T07:14:02,025           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T07:14:02,026           combination with a more fine grained `package-data` configuration.

2023-09-29T07:14:02,027           You can read more about "package data files" on setuptools documentation page:

2023-09-29T07:14:02,036           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T07:14:02,038           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T07:14:02,038                 even if it does not contain any `.py` files.
2023-09-29T07:14:02,039                 On the other hand, currently there is no concept of package data
2023-09-29T07:14:02,040                 directory, all directories are treated like packages.
2023-09-29T07:14:02,040           ********************************************************************************

2023-09-29T07:14:02,041   !!
2023-09-29T07:14:02,042     check.warn(importable)
2023-09-29T07:14:02,043   /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.share.atomselect' is absent from the `packages` configuration.
2023-09-29T07:14:02,043   !!

2023-09-29T07:14:02,045           ********************************************************************************
2023-09-29T07:14:02,045           ############################
2023-09-29T07:14:02,046           # Package would be ignored #
2023-09-29T07:14:02,047           ############################
2023-09-29T07:14:02,047           Python recognizes 'moleculekit.share.atomselect' as an importable package[^1],
2023-09-29T07:14:02,048           but it is absent from setuptools' `packages` configuration.

2023-09-29T07:14:02,048           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T07:14:02,049           package, please make sure that 'moleculekit.share.atomselect' is explicitly added
2023-09-29T07:14:02,050           to the `packages` configuration field.

2023-09-29T07:14:02,051           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T07:14:02,051           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T07:14:02,052           instead of `find_packages(...)`/`find:`).

2023-09-29T07:14:02,053           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T07:14:02,054           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T07:14:02,055           If you don't want 'moleculekit.share.atomselect' to be distributed and are
2023-09-29T07:14:02,055           already explicitly excluding 'moleculekit.share.atomselect' via
2023-09-29T07:14:02,056           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T07:14:02,057           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T07:14:02,057           combination with a more fine grained `package-data` configuration.

2023-09-29T07:14:02,058           You can read more about "package data files" on setuptools documentation page:

2023-09-29T07:14:02,059           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T07:14:02,060           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T07:14:02,060                 even if it does not contain any `.py` files.
2023-09-29T07:14:02,061                 On the other hand, currently there is no concept of package data
2023-09-29T07:14:02,061                 directory, all directories are treated like packages.
2023-09-29T07:14:02,062           ********************************************************************************

2023-09-29T07:14:02,062   !!
2023-09-29T07:14:02,063     check.warn(importable)
2023-09-29T07:14:02,063   /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.share.pdb2pqr.residues' is absent from the `packages` configuration.
2023-09-29T07:14:02,064   !!

2023-09-29T07:14:02,065           ********************************************************************************
2023-09-29T07:14:02,065           ############################
2023-09-29T07:14:02,066           # Package would be ignored #
2023-09-29T07:14:02,066           ############################
2023-09-29T07:14:02,067           Python recognizes 'moleculekit.share.pdb2pqr.residues' as an importable package[^1],
2023-09-29T07:14:02,067           but it is absent from setuptools' `packages` configuration.

2023-09-29T07:14:02,068           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T07:14:02,069           package, please make sure that 'moleculekit.share.pdb2pqr.residues' is explicitly added
2023-09-29T07:14:02,069           to the `packages` configuration field.

2023-09-29T07:14:02,070           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T07:14:02,071           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T07:14:02,071           instead of `find_packages(...)`/`find:`).

2023-09-29T07:14:02,072           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T07:14:02,073           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T07:14:02,075           If you don't want 'moleculekit.share.pdb2pqr.residues' to be distributed and are
2023-09-29T07:14:02,075           already explicitly excluding 'moleculekit.share.pdb2pqr.residues' via
2023-09-29T07:14:02,076           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T07:14:02,076           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T07:14:02,077           combination with a more fine grained `package-data` configuration.

2023-09-29T07:14:02,078           You can read more about "package data files" on setuptools documentation page:

2023-09-29T07:14:02,079           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T07:14:02,080           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T07:14:02,081                 even if it does not contain any `.py` files.
2023-09-29T07:14:02,081                 On the other hand, currently there is no concept of package data
2023-09-29T07:14:02,082                 directory, all directories are treated like packages.
2023-09-29T07:14:02,082           ********************************************************************************

2023-09-29T07:14:02,084   !!
2023-09-29T07:14:02,084     check.warn(importable)
2023-09-29T07:14:02,084   /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.tmalign' is absent from the `packages` configuration.
2023-09-29T07:14:02,085   !!

2023-09-29T07:14:02,086           ********************************************************************************
2023-09-29T07:14:02,086           ############################
2023-09-29T07:14:02,087           # Package would be ignored #
2023-09-29T07:14:02,087           ############################
2023-09-29T07:14:02,088           Python recognizes 'moleculekit.tmalign' as an importable package[^1],
2023-09-29T07:14:02,088           but it is absent from setuptools' `packages` configuration.

2023-09-29T07:14:02,089           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T07:14:02,089           package, please make sure that 'moleculekit.tmalign' is explicitly added
2023-09-29T07:14:02,090           to the `packages` configuration field.

2023-09-29T07:14:02,091           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T07:14:02,091           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T07:14:02,092           instead of `find_packages(...)`/`find:`).

2023-09-29T07:14:02,093           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T07:14:02,094           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T07:14:02,095           If you don't want 'moleculekit.tmalign' to be distributed and are
2023-09-29T07:14:02,095           already explicitly excluding 'moleculekit.tmalign' via
2023-09-29T07:14:02,096           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T07:14:02,096           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T07:14:02,097           combination with a more fine grained `package-data` configuration.

2023-09-29T07:14:02,098           You can read more about "package data files" on setuptools documentation page:

2023-09-29T07:14:02,099           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T07:14:02,100           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T07:14:02,101                 even if it does not contain any `.py` files.
2023-09-29T07:14:02,101                 On the other hand, currently there is no concept of package data
2023-09-29T07:14:02,101                 directory, all directories are treated like packages.
2023-09-29T07:14:02,102           ********************************************************************************

2023-09-29T07:14:02,103   !!
2023-09-29T07:14:02,104     check.warn(importable)
2023-09-29T07:14:02,104   /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.tmalign.include' is absent from the `packages` configuration.
2023-09-29T07:14:02,105   !!

2023-09-29T07:14:02,106           ********************************************************************************
2023-09-29T07:14:02,106           ############################
2023-09-29T07:14:02,107           # Package would be ignored #
2023-09-29T07:14:02,107           ############################
2023-09-29T07:14:02,108           Python recognizes 'moleculekit.tmalign.include' as an importable package[^1],
2023-09-29T07:14:02,108           but it is absent from setuptools' `packages` configuration.

2023-09-29T07:14:02,109           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T07:14:02,110           package, please make sure that 'moleculekit.tmalign.include' is explicitly added
2023-09-29T07:14:02,110           to the `packages` configuration field.

2023-09-29T07:14:02,112           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T07:14:02,112           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T07:14:02,113           instead of `find_packages(...)`/`find:`).

2023-09-29T07:14:02,114           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T07:14:02,115           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T07:14:02,116           If you don't want 'moleculekit.tmalign.include' to be distributed and are
2023-09-29T07:14:02,116           already explicitly excluding 'moleculekit.tmalign.include' via
2023-09-29T07:14:02,117           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T07:14:02,117           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T07:14:02,118           combination with a more fine grained `package-data` configuration.

2023-09-29T07:14:02,118           You can read more about "package data files" on setuptools documentation page:

2023-09-29T07:14:02,119           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T07:14:02,121           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T07:14:02,121                 even if it does not contain any `.py` files.
2023-09-29T07:14:02,122                 On the other hand, currently there is no concept of package data
2023-09-29T07:14:02,122                 directory, all directories are treated like packages.
2023-09-29T07:14:02,123           ********************************************************************************

2023-09-29T07:14:02,125   !!
2023-09-29T07:14:02,126     check.warn(importable)
2023-09-29T07:14:02,126   /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.tmalign.src' is absent from the `packages` configuration.
2023-09-29T07:14:02,127   !!

2023-09-29T07:14:02,128           ********************************************************************************
2023-09-29T07:14:02,128           ############################
2023-09-29T07:14:02,128           # Package would be ignored #
2023-09-29T07:14:02,129           ############################
2023-09-29T07:14:02,129           Python recognizes 'moleculekit.tmalign.src' as an importable package[^1],
2023-09-29T07:14:02,130           but it is absent from setuptools' `packages` configuration.

2023-09-29T07:14:02,131           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T07:14:02,132           package, please make sure that 'moleculekit.tmalign.src' is explicitly added
2023-09-29T07:14:02,132           to the `packages` configuration field.

2023-09-29T07:14:02,133           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T07:14:02,134           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T07:14:02,134           instead of `find_packages(...)`/`find:`).

2023-09-29T07:14:02,135           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T07:14:02,136           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T07:14:02,137           If you don't want 'moleculekit.tmalign.src' to be distributed and are
2023-09-29T07:14:02,138           already explicitly excluding 'moleculekit.tmalign.src' via
2023-09-29T07:14:02,139           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T07:14:02,139           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T07:14:02,140           combination with a more fine grained `package-data` configuration.

2023-09-29T07:14:02,141           You can read more about "package data files" on setuptools documentation page:

2023-09-29T07:14:02,142           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T07:14:02,144           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T07:14:02,144                 even if it does not contain any `.py` files.
2023-09-29T07:14:02,145                 On the other hand, currently there is no concept of package data
2023-09-29T07:14:02,145                 directory, all directories are treated like packages.
2023-09-29T07:14:02,146           ********************************************************************************

2023-09-29T07:14:02,147   !!
2023-09-29T07:14:02,147     check.warn(importable)
2023-09-29T07:14:02,148   /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.wrapping' is absent from the `packages` configuration.
2023-09-29T07:14:02,148   !!

2023-09-29T07:14:02,149           ********************************************************************************
2023-09-29T07:14:02,149           ############################
2023-09-29T07:14:02,150           # Package would be ignored #
2023-09-29T07:14:02,150           ############################
2023-09-29T07:14:02,151           Python recognizes 'moleculekit.wrapping' as an importable package[^1],
2023-09-29T07:14:02,151           but it is absent from setuptools' `packages` configuration.

2023-09-29T07:14:02,152           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T07:14:02,153           package, please make sure that 'moleculekit.wrapping' is explicitly added
2023-09-29T07:14:02,153           to the `packages` configuration field.

2023-09-29T07:14:02,154           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T07:14:02,155           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T07:14:02,155           instead of `find_packages(...)`/`find:`).

2023-09-29T07:14:02,156           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T07:14:02,157           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T07:14:02,158           If you don't want 'moleculekit.wrapping' to be distributed and are
2023-09-29T07:14:02,159           already explicitly excluding 'moleculekit.wrapping' via
2023-09-29T07:14:02,160           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T07:14:02,160           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T07:14:02,160           combination with a more fine grained `package-data` configuration.

2023-09-29T07:14:02,161           You can read more about "package data files" on setuptools documentation page:

2023-09-29T07:14:02,162           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T07:14:02,164           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T07:14:02,165                 even if it does not contain any `.py` files.
2023-09-29T07:14:02,165                 On the other hand, currently there is no concept of package data
2023-09-29T07:14:02,166                 directory, all directories are treated like packages.
2023-09-29T07:14:02,166           ********************************************************************************

2023-09-29T07:14:02,167   !!
2023-09-29T07:14:02,168     check.warn(importable)
2023-09-29T07:14:02,168   /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.xtc_utils' is absent from the `packages` configuration.
2023-09-29T07:14:02,169   !!

2023-09-29T07:14:02,170           ********************************************************************************
2023-09-29T07:14:02,170           ############################
2023-09-29T07:14:02,171           # Package would be ignored #
2023-09-29T07:14:02,171           ############################
2023-09-29T07:14:02,172           Python recognizes 'moleculekit.xtc_utils' as an importable package[^1],
2023-09-29T07:14:02,172           but it is absent from setuptools' `packages` configuration.

2023-09-29T07:14:02,173           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T07:14:02,174           package, please make sure that 'moleculekit.xtc_utils' is explicitly added
2023-09-29T07:14:02,174           to the `packages` configuration field.

2023-09-29T07:14:02,175           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T07:14:02,175           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T07:14:02,176           instead of `find_packages(...)`/`find:`).

2023-09-29T07:14:02,177           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T07:14:02,177           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T07:14:02,178           If you don't want 'moleculekit.xtc_utils' to be distributed and are
2023-09-29T07:14:02,179           already explicitly excluding 'moleculekit.xtc_utils' via
2023-09-29T07:14:02,179           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T07:14:02,180           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T07:14:02,180           combination with a more fine grained `package-data` configuration.

2023-09-29T07:14:02,181           You can read more about "package data files" on setuptools documentation page:

2023-09-29T07:14:02,182           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T07:14:02,184           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T07:14:02,184                 even if it does not contain any `.py` files.
2023-09-29T07:14:02,184                 On the other hand, currently there is no concept of package data
2023-09-29T07:14:02,185                 directory, all directories are treated like packages.
2023-09-29T07:14:02,185           ********************************************************************************

2023-09-29T07:14:02,186   !!
2023-09-29T07:14:02,187     check.warn(importable)
2023-09-29T07:14:02,187   /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.xtc_utils.include' is absent from the `packages` configuration.
2023-09-29T07:14:02,188   !!

2023-09-29T07:14:02,189           ********************************************************************************
2023-09-29T07:14:02,189           ############################
2023-09-29T07:14:02,190           # Package would be ignored #
2023-09-29T07:14:02,190           ############################
2023-09-29T07:14:02,191           Python recognizes 'moleculekit.xtc_utils.include' as an importable package[^1],
2023-09-29T07:14:02,191           but it is absent from setuptools' `packages` configuration.

2023-09-29T07:14:02,192           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T07:14:02,193           package, please make sure that 'moleculekit.xtc_utils.include' is explicitly added
2023-09-29T07:14:02,193           to the `packages` configuration field.

2023-09-29T07:14:02,194           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T07:14:02,195           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T07:14:02,195           instead of `find_packages(...)`/`find:`).

2023-09-29T07:14:02,197           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T07:14:02,198           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T07:14:02,199           If you don't want 'moleculekit.xtc_utils.include' to be distributed and are
2023-09-29T07:14:02,199           already explicitly excluding 'moleculekit.xtc_utils.include' via
2023-09-29T07:14:02,200           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T07:14:02,200           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T07:14:02,201           combination with a more fine grained `package-data` configuration.

2023-09-29T07:14:02,202           You can read more about "package data files" on setuptools documentation page:

2023-09-29T07:14:02,203           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T07:14:02,204           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T07:14:02,205                 even if it does not contain any `.py` files.
2023-09-29T07:14:02,205                 On the other hand, currently there is no concept of package data
2023-09-29T07:14:02,205                 directory, all directories are treated like packages.
2023-09-29T07:14:02,206           ********************************************************************************

2023-09-29T07:14:02,207   !!
2023-09-29T07:14:02,207     check.warn(importable)
2023-09-29T07:14:02,208   /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.xtc_utils.src' is absent from the `packages` configuration.
2023-09-29T07:14:02,208   !!

2023-09-29T07:14:02,209           ********************************************************************************
2023-09-29T07:14:02,209           ############################
2023-09-29T07:14:02,210           # Package would be ignored #
2023-09-29T07:14:02,210           ############################
2023-09-29T07:14:02,210           Python recognizes 'moleculekit.xtc_utils.src' as an importable package[^1],
2023-09-29T07:14:02,211           but it is absent from setuptools' `packages` configuration.

2023-09-29T07:14:02,212           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T07:14:02,212           package, please make sure that 'moleculekit.xtc_utils.src' is explicitly added
2023-09-29T07:14:02,213           to the `packages` configuration field.

2023-09-29T07:14:02,214           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T07:14:02,214           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T07:14:02,215           instead of `find_packages(...)`/`find:`).

2023-09-29T07:14:02,216           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T07:14:02,217           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T07:14:02,218           If you don't want 'moleculekit.xtc_utils.src' to be distributed and are
2023-09-29T07:14:02,218           already explicitly excluding 'moleculekit.xtc_utils.src' via
2023-09-29T07:14:02,219           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T07:14:02,219           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T07:14:02,220           combination with a more fine grained `package-data` configuration.

2023-09-29T07:14:02,221           You can read more about "package data files" on setuptools documentation page:

2023-09-29T07:14:02,222           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T07:14:02,223           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T07:14:02,224                 even if it does not contain any `.py` files.
2023-09-29T07:14:02,224                 On the other hand, currently there is no concept of package data
2023-09-29T07:14:02,225                 directory, all directories are treated like packages.
2023-09-29T07:14:02,225           ********************************************************************************

2023-09-29T07:14:02,226   !!
2023-09-29T07:14:02,227     check.warn(importable)
2023-09-29T07:14:02,227   copying moleculekit/logging.ini -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-29T07:14:02,228   copying moleculekit/vmd_wrapper -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-09-29T07:14:02,228   creating build/lib.linux-armv7l-cpython-311/moleculekit/atomselect_utils
2023-09-29T07:14:02,229   copying moleculekit/atomselect_utils/atomselect_utils.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/atomselect_utils
2023-09-29T07:14:02,229   copying moleculekit/atomselect_utils/atomselect_utils.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/atomselect_utils
2023-09-29T07:14:02,230   creating build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser_utils
2023-09-29T07:14:02,230   copying moleculekit/bondguesser_utils/bondguesser_utils.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser_utils
2023-09-29T07:14:02,231   copying moleculekit/bondguesser_utils/bondguesser_utils.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser_utils
2023-09-29T07:14:02,231   creating build/lib.linux-armv7l-cpython-311/moleculekit/distance_utils
2023-09-29T07:14:02,232   copying moleculekit/distance_utils/distance_utils.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/distance_utils
2023-09-29T07:14:02,232   copying moleculekit/distance_utils/distance_utils.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/distance_utils
2023-09-29T07:14:02,232   creating build/lib.linux-armv7l-cpython-311/moleculekit/occupancy_utils
2023-09-29T07:14:02,233   copying moleculekit/occupancy_utils/occupancy_utils.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/occupancy_utils
2023-09-29T07:14:02,233   copying moleculekit/occupancy_utils/occupancy_utils.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/occupancy_utils
2023-09-29T07:14:02,234   creating build/lib.linux-armv7l-cpython-311/moleculekit/share
2023-09-29T07:14:02,234   copying moleculekit/share/ALA.cif -> build/lib.linux-armv7l-cpython-311/moleculekit/share
2023-09-29T07:14:02,235   copying moleculekit/share/backbone.cif -> build/lib.linux-armv7l-cpython-311/moleculekit/share
2023-09-29T07:14:02,235   copying moleculekit/share/opm_sequences.json -> build/lib.linux-armv7l-cpython-311/moleculekit/share
2023-09-29T07:14:02,236   creating build/lib.linux-armv7l-cpython-311/moleculekit/share/atomselect
2023-09-29T07:14:02,236   copying moleculekit/share/atomselect/atomselect.json -> build/lib.linux-armv7l-cpython-311/moleculekit/share/atomselect
2023-09-29T07:14:02,236   creating build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr
2023-09-29T07:14:02,237   creating build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,237   copying moleculekit/share/pdb2pqr/residues/.gitkeep -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,238   copying moleculekit/share/pdb2pqr/residues/004.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,238   copying moleculekit/share/pdb2pqr/residues/004.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,239   copying moleculekit/share/pdb2pqr/residues/03Y.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,240   copying moleculekit/share/pdb2pqr/residues/03Y.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,240   copying moleculekit/share/pdb2pqr/residues/0A1.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,240   copying moleculekit/share/pdb2pqr/residues/0A1.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,241   copying moleculekit/share/pdb2pqr/residues/0AF.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,241   copying moleculekit/share/pdb2pqr/residues/0AF.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,242   copying moleculekit/share/pdb2pqr/residues/0BN.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,242   copying moleculekit/share/pdb2pqr/residues/0BN.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,243   copying moleculekit/share/pdb2pqr/residues/1MH.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,243   copying moleculekit/share/pdb2pqr/residues/1MH.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,244   copying moleculekit/share/pdb2pqr/residues/2AS.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,244   copying moleculekit/share/pdb2pqr/residues/2AS.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,245   copying moleculekit/share/pdb2pqr/residues/2GX.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,245   copying moleculekit/share/pdb2pqr/residues/2GX.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,245   copying moleculekit/share/pdb2pqr/residues/2ML.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,246   copying moleculekit/share/pdb2pqr/residues/2ML.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,246   copying moleculekit/share/pdb2pqr/residues/2MR.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,247   copying moleculekit/share/pdb2pqr/residues/2MR.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,247   copying moleculekit/share/pdb2pqr/residues/4IN.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,248   copying moleculekit/share/pdb2pqr/residues/4IN.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,248   copying moleculekit/share/pdb2pqr/residues/4PH.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,249   copying moleculekit/share/pdb2pqr/residues/4PH.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,249   copying moleculekit/share/pdb2pqr/residues/4PQ.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,250   copying moleculekit/share/pdb2pqr/residues/4PQ.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,250   copying moleculekit/share/pdb2pqr/residues/5JP.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,251   copying moleculekit/share/pdb2pqr/residues/5JP.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,251   copying moleculekit/share/pdb2pqr/residues/AA4.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,252   copying moleculekit/share/pdb2pqr/residues/AA4.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,252   copying moleculekit/share/pdb2pqr/residues/ABA.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,253   copying moleculekit/share/pdb2pqr/residues/ABA.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,253   copying moleculekit/share/pdb2pqr/residues/AHP.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,253   copying moleculekit/share/pdb2pqr/residues/AHP.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,254   copying moleculekit/share/pdb2pqr/residues/ALC.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,254   copying moleculekit/share/pdb2pqr/residues/ALC.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,255   copying moleculekit/share/pdb2pqr/residues/ALN.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,256   copying moleculekit/share/pdb2pqr/residues/ALN.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,256   copying moleculekit/share/pdb2pqr/residues/ALY.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,257   copying moleculekit/share/pdb2pqr/residues/ALY.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,257   copying moleculekit/share/pdb2pqr/residues/APD.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,258   copying moleculekit/share/pdb2pqr/residues/APD.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,258   copying moleculekit/share/pdb2pqr/residues/BB8.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,258   copying moleculekit/share/pdb2pqr/residues/BB8.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,259   copying moleculekit/share/pdb2pqr/residues/BCS.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,259   copying moleculekit/share/pdb2pqr/residues/BCS.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,260   copying moleculekit/share/pdb2pqr/residues/BTK.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,260   copying moleculekit/share/pdb2pqr/residues/BTK.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,260   copying moleculekit/share/pdb2pqr/residues/CCS.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,261   copying moleculekit/share/pdb2pqr/residues/CCS.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,261   copying moleculekit/share/pdb2pqr/residues/CGU.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,262   copying moleculekit/share/pdb2pqr/residues/CGU.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,262   copying moleculekit/share/pdb2pqr/residues/CSA.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,263   copying moleculekit/share/pdb2pqr/residues/CSA.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,263   copying moleculekit/share/pdb2pqr/residues/CSO.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,264   copying moleculekit/share/pdb2pqr/residues/CSO.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,264   copying moleculekit/share/pdb2pqr/residues/CSP.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,265   copying moleculekit/share/pdb2pqr/residues/CSP.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,265   copying moleculekit/share/pdb2pqr/residues/CSS.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,266   copying moleculekit/share/pdb2pqr/residues/CSS.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,266   copying moleculekit/share/pdb2pqr/residues/D4P.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,267   copying moleculekit/share/pdb2pqr/residues/D4P.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,267   copying moleculekit/share/pdb2pqr/residues/DA2.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,268   copying moleculekit/share/pdb2pqr/residues/DA2.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,268   copying moleculekit/share/pdb2pqr/residues/DAB.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,269   copying moleculekit/share/pdb2pqr/residues/DAB.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,269   copying moleculekit/share/pdb2pqr/residues/DAH.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,270   copying moleculekit/share/pdb2pqr/residues/DAH.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,270   copying moleculekit/share/pdb2pqr/residues/DPP.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,270   copying moleculekit/share/pdb2pqr/residues/DPP.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,271   copying moleculekit/share/pdb2pqr/residues/ESC.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,271   copying moleculekit/share/pdb2pqr/residues/ESC.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,272   copying moleculekit/share/pdb2pqr/residues/FGL.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,272   copying moleculekit/share/pdb2pqr/residues/FGL.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,272   copying moleculekit/share/pdb2pqr/residues/GHG.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,273   copying moleculekit/share/pdb2pqr/residues/GHG.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,273   copying moleculekit/share/pdb2pqr/residues/GME.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,274   copying moleculekit/share/pdb2pqr/residues/GME.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,274   copying moleculekit/share/pdb2pqr/residues/GNC.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,275   copying moleculekit/share/pdb2pqr/residues/GNC.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,275   copying moleculekit/share/pdb2pqr/residues/HHK.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,276   copying moleculekit/share/pdb2pqr/residues/HHK.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,276   copying moleculekit/share/pdb2pqr/residues/HLU.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,277   copying moleculekit/share/pdb2pqr/residues/HLU.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,277   copying moleculekit/share/pdb2pqr/residues/HLX.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,278   copying moleculekit/share/pdb2pqr/residues/HLX.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,278   copying moleculekit/share/pdb2pqr/residues/HOX.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,279   copying moleculekit/share/pdb2pqr/residues/HOX.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,279   copying moleculekit/share/pdb2pqr/residues/HPE.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,280   copying moleculekit/share/pdb2pqr/residues/HPE.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,280   copying moleculekit/share/pdb2pqr/residues/HQA.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,281   copying moleculekit/share/pdb2pqr/residues/HQA.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,281   copying moleculekit/share/pdb2pqr/residues/HTR.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,282   copying moleculekit/share/pdb2pqr/residues/HTR.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,282   copying moleculekit/share/pdb2pqr/residues/HYP.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,283   copying moleculekit/share/pdb2pqr/residues/HYP.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,285   copying moleculekit/share/pdb2pqr/residues/I2M.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,287   copying moleculekit/share/pdb2pqr/residues/I2M.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,289   copying moleculekit/share/pdb2pqr/residues/IGL.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,290   copying moleculekit/share/pdb2pqr/residues/IGL.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,292   copying moleculekit/share/pdb2pqr/residues/IIL.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,294   copying moleculekit/share/pdb2pqr/residues/IIL.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,296   copying moleculekit/share/pdb2pqr/residues/IML.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,298   copying moleculekit/share/pdb2pqr/residues/IML.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,300   copying moleculekit/share/pdb2pqr/residues/KYN.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,302   copying moleculekit/share/pdb2pqr/residues/KYN.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,304   copying moleculekit/share/pdb2pqr/residues/LME.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,306   copying moleculekit/share/pdb2pqr/residues/LME.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,308   copying moleculekit/share/pdb2pqr/residues/LMQ.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,310   copying moleculekit/share/pdb2pqr/residues/LMQ.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,312   copying moleculekit/share/pdb2pqr/residues/LYZ.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,315   copying moleculekit/share/pdb2pqr/residues/LYZ.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,317   copying moleculekit/share/pdb2pqr/residues/M3L.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,319   copying moleculekit/share/pdb2pqr/residues/M3L.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,321   copying moleculekit/share/pdb2pqr/residues/ME0.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,323   copying moleculekit/share/pdb2pqr/residues/ME0.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,325   copying moleculekit/share/pdb2pqr/residues/MEA.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,327   copying moleculekit/share/pdb2pqr/residues/MEA.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,329   copying moleculekit/share/pdb2pqr/residues/MEN.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,331   copying moleculekit/share/pdb2pqr/residues/MEN.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,333   copying moleculekit/share/pdb2pqr/residues/MEQ.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,335   copying moleculekit/share/pdb2pqr/residues/MEQ.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,337   copying moleculekit/share/pdb2pqr/residues/MLE.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,339   copying moleculekit/share/pdb2pqr/residues/MLE.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,341   copying moleculekit/share/pdb2pqr/residues/MLY.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,342   copying moleculekit/share/pdb2pqr/residues/MLY.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,345   copying moleculekit/share/pdb2pqr/residues/MLZ.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,347   copying moleculekit/share/pdb2pqr/residues/MLZ.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,349   copying moleculekit/share/pdb2pqr/residues/MME.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,351   copying moleculekit/share/pdb2pqr/residues/MME.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,353   copying moleculekit/share/pdb2pqr/residues/MMO.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,355   copying moleculekit/share/pdb2pqr/residues/MMO.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,357   copying moleculekit/share/pdb2pqr/residues/MVA.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,359   copying moleculekit/share/pdb2pqr/residues/MVA.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,361   copying moleculekit/share/pdb2pqr/residues/NAL.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,363   copying moleculekit/share/pdb2pqr/residues/NAL.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,365   copying moleculekit/share/pdb2pqr/residues/NCY.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,368   copying moleculekit/share/pdb2pqr/residues/NCY.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,371   copying moleculekit/share/pdb2pqr/residues/NLE.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,372   copying moleculekit/share/pdb2pqr/residues/NLE.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,375   copying moleculekit/share/pdb2pqr/residues/NVA.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,376   copying moleculekit/share/pdb2pqr/residues/NVA.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,379   copying moleculekit/share/pdb2pqr/residues/NZC.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,381   copying moleculekit/share/pdb2pqr/residues/NZC.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,383   copying moleculekit/share/pdb2pqr/residues/OCY.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,385   copying moleculekit/share/pdb2pqr/residues/OCY.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,387   copying moleculekit/share/pdb2pqr/residues/OMX.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,389   copying moleculekit/share/pdb2pqr/residues/OMX.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,391   copying moleculekit/share/pdb2pqr/residues/ONL.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,394   copying moleculekit/share/pdb2pqr/residues/ONL.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,396   copying moleculekit/share/pdb2pqr/residues/ORM.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,398   copying moleculekit/share/pdb2pqr/residues/ORM.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,400   copying moleculekit/share/pdb2pqr/residues/P1L.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,401   copying moleculekit/share/pdb2pqr/residues/P1L.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,404   copying moleculekit/share/pdb2pqr/residues/PCA.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,406   copying moleculekit/share/pdb2pqr/residues/PCA.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,408   copying moleculekit/share/pdb2pqr/residues/PRK.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,410   copying moleculekit/share/pdb2pqr/residues/PRK.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,412   copying moleculekit/share/pdb2pqr/residues/PTR.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,414   copying moleculekit/share/pdb2pqr/residues/PTR.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,416   copying moleculekit/share/pdb2pqr/residues/SEP.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,418   copying moleculekit/share/pdb2pqr/residues/SEP.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,423   copying moleculekit/share/pdb2pqr/residues/TPO.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,429   copying moleculekit/share/pdb2pqr/residues/TPO.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,432   copying moleculekit/share/pdb2pqr/residues/TRO.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,434   copying moleculekit/share/pdb2pqr/residues/TRO.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,436   copying moleculekit/share/pdb2pqr/residues/TY2.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,438   copying moleculekit/share/pdb2pqr/residues/TY2.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,441   copying moleculekit/share/pdb2pqr/residues/TYQ.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,443   copying moleculekit/share/pdb2pqr/residues/TYQ.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,445   copying moleculekit/share/pdb2pqr/residues/YCM.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,447   copying moleculekit/share/pdb2pqr/residues/YCM.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,449   copying moleculekit/share/pdb2pqr/residues/YNM.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,451   copying moleculekit/share/pdb2pqr/residues/YNM.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-09-29T07:14:02,453   creating build/lib.linux-armv7l-cpython-311/moleculekit/tmalign
2023-09-29T07:14:02,454   copying moleculekit/tmalign/tmalign_util.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/tmalign
2023-09-29T07:14:02,482   copying moleculekit/tmalign/tmalign_util.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/tmalign
2023-09-29T07:14:02,484   copying moleculekit/tmalign/tmalignlib.pxd -> build/lib.linux-armv7l-cpython-311/moleculekit/tmalign
2023-09-29T07:14:02,486   creating build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/include
2023-09-29T07:14:02,486   copying moleculekit/tmalign/include/TMAlign.h -> build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/include
2023-09-29T07:14:02,489   creating build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/src
2023-09-29T07:14:02,490   copying moleculekit/tmalign/src/TMAlign.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/src
2023-09-29T07:14:02,497   creating build/lib.linux-armv7l-cpython-311/moleculekit/wrapping
2023-09-29T07:14:02,497   copying moleculekit/wrapping/wrapping.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/wrapping
2023-09-29T07:14:02,516   copying moleculekit/wrapping/wrapping.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/wrapping
2023-09-29T07:14:02,519   creating build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils
2023-09-29T07:14:02,520   copying moleculekit/xtc_utils/xtc.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils
2023-09-29T07:14:02,542   copying moleculekit/xtc_utils/xtc.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils
2023-09-29T07:14:02,544   copying moleculekit/xtc_utils/xtclib.pxd -> build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils
2023-09-29T07:14:02,546   creating build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/include
2023-09-29T07:14:02,546   copying moleculekit/xtc_utils/include/xdrfile.h -> build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/include
2023-09-29T07:14:02,550   copying moleculekit/xtc_utils/include/xdrfile_xtc.h -> build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/include
2023-09-29T07:14:02,554   copying moleculekit/xtc_utils/include/xtc.h -> build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/include
2023-09-29T07:14:02,556   creating build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/src
2023-09-29T07:14:02,557   copying moleculekit/xtc_utils/src/xdrfile.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/src
2023-09-29T07:14:02,561   copying moleculekit/xtc_utils/src/xdrfile_xtc.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/src
2023-09-29T07:14:02,563   copying moleculekit/xtc_utils/src/xtc.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/src
2023-09-29T07:14:02,567   creating build/lib.linux-armv7l-cpython-311/moleculekit/interactions/cationpi
2023-09-29T07:14:02,568   copying moleculekit/interactions/cationpi/cationpi.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/cationpi
2023-09-29T07:14:02,590   copying moleculekit/interactions/cationpi/cationpi.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/cationpi
2023-09-29T07:14:02,593   creating build/lib.linux-armv7l-cpython-311/moleculekit/interactions/hbonds
2023-09-29T07:14:02,594   copying moleculekit/interactions/hbonds/hbonds.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/hbonds
2023-09-29T07:14:02,615   copying moleculekit/interactions/hbonds/hbonds.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/hbonds
2023-09-29T07:14:02,617   creating build/lib.linux-armv7l-cpython-311/moleculekit/interactions/pipi
2023-09-29T07:14:02,618   copying moleculekit/interactions/pipi/pipi.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/pipi
2023-09-29T07:14:02,639   copying moleculekit/interactions/pipi/pipi.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/pipi
2023-09-29T07:14:02,643   creating build/lib.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole
2023-09-29T07:14:02,644   copying moleculekit/interactions/sigmahole/sigmahole.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole
2023-09-29T07:14:02,673   copying moleculekit/interactions/sigmahole/sigmahole.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole
2023-09-29T07:14:02,689   UPDATING build/lib.linux-armv7l-cpython-311/moleculekit/_version.py
2023-09-29T07:14:02,690   set build/lib.linux-armv7l-cpython-311/moleculekit/_version.py to '1.7.13'
2023-09-29T07:14:02,690   running build_ext
2023-09-29T07:14:02,702   building 'moleculekit.interactions.hbonds' extension
2023-09-29T07:14:02,703   creating build/temp.linux-armv7l-cpython-311
2023-09-29T07:14:02,704   creating build/temp.linux-armv7l-cpython-311/moleculekit
2023-09-29T07:14:02,705   creating build/temp.linux-armv7l-cpython-311/moleculekit/interactions
2023-09-29T07:14:02,706   creating build/temp.linux-armv7l-cpython-311/moleculekit/interactions/hbonds
2023-09-29T07:14:02,707   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/interactions/hbonds/hbonds.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/interactions/hbonds/hbonds.o -O3
2023-09-29T07:14:03,336   In file included from /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-09-29T07:14:03,337                    from /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-09-29T07:14:03,337                    from /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-09-29T07:14:03,338                    from moleculekit/interactions/hbonds/hbonds.cpp:1192:
2023-09-29T07:14:03,338   /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-09-29T07:14:03,339      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-09-29T07:14:03,340         |  ^~~~~~~
2023-09-29T07:14:34,063   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/interactions/hbonds/hbonds.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/interactions/hbonds.cpython-311-arm-linux-gnueabihf.so
2023-09-29T07:14:34,351   building 'moleculekit.interactions.pipi' extension
2023-09-29T07:14:34,352   creating build/temp.linux-armv7l-cpython-311/moleculekit/interactions/pipi
2023-09-29T07:14:34,352   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/interactions/pipi/pipi.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/interactions/pipi/pipi.o -O3
2023-09-29T07:14:34,657   In file included from /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-09-29T07:14:34,658                    from /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-09-29T07:14:34,659                    from /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-09-29T07:14:34,659                    from moleculekit/interactions/pipi/pipi.cpp:1192:
2023-09-29T07:14:34,660   /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-09-29T07:14:34,661      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-09-29T07:14:34,661         |  ^~~~~~~
2023-09-29T07:15:07,233   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/interactions/pipi/pipi.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/interactions/pipi.cpython-311-arm-linux-gnueabihf.so
2023-09-29T07:15:07,531   building 'moleculekit.interactions.cationpi' extension
2023-09-29T07:15:07,531   creating build/temp.linux-armv7l-cpython-311/moleculekit/interactions/cationpi
2023-09-29T07:15:07,532   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/interactions/cationpi/cationpi.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/interactions/cationpi/cationpi.o -O3
2023-09-29T07:15:07,840   In file included from /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-09-29T07:15:07,841                    from /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-09-29T07:15:07,841                    from /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-09-29T07:15:07,842                    from moleculekit/interactions/cationpi/cationpi.cpp:1192:
2023-09-29T07:15:07,842   /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-09-29T07:15:07,843      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-09-29T07:15:07,843         |  ^~~~~~~
2023-09-29T07:15:40,137   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/interactions/cationpi/cationpi.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/interactions/cationpi.cpython-311-arm-linux-gnueabihf.so
2023-09-29T07:15:40,418   building 'moleculekit.interactions.sigmahole' extension
2023-09-29T07:15:40,419   creating build/temp.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole
2023-09-29T07:15:40,420   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/interactions/sigmahole/sigmahole.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole/sigmahole.o -O3
2023-09-29T07:15:40,722   In file included from /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-09-29T07:15:40,723                    from /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-09-29T07:15:40,724                    from /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-09-29T07:15:40,724                    from moleculekit/interactions/sigmahole/sigmahole.cpp:1192:
2023-09-29T07:15:40,725   /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-09-29T07:15:40,725      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-09-29T07:15:40,726         |  ^~~~~~~
2023-09-29T07:16:12,525   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole/sigmahole.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole.cpython-311-arm-linux-gnueabihf.so
2023-09-29T07:16:12,813   building 'moleculekit.wrapping' extension
2023-09-29T07:16:12,814   creating build/temp.linux-armv7l-cpython-311/moleculekit/wrapping
2023-09-29T07:16:12,815   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/wrapping/wrapping.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/wrapping/wrapping.o -O3
2023-09-29T07:16:13,120   In file included from /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-09-29T07:16:13,120                    from /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-09-29T07:16:13,121                    from /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-09-29T07:16:13,121                    from moleculekit/wrapping/wrapping.cpp:1192:
2023-09-29T07:16:13,121   /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-09-29T07:16:13,122      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-09-29T07:16:13,123         |  ^~~~~~~
2023-09-29T07:16:41,129   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/wrapping/wrapping.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/wrapping.cpython-311-arm-linux-gnueabihf.so
2023-09-29T07:16:41,317   building 'moleculekit.bondguesser_utils' extension
2023-09-29T07:16:41,318   creating build/temp.linux-armv7l-cpython-311/moleculekit/bondguesser_utils
2023-09-29T07:16:41,318   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/bondguesser_utils/bondguesser_utils.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/bondguesser_utils/bondguesser_utils.o -O3
2023-09-29T07:16:41,622   In file included from /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-09-29T07:16:41,623                    from /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-09-29T07:16:41,623                    from /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-09-29T07:16:41,624                    from moleculekit/bondguesser_utils/bondguesser_utils.cpp:1192:
2023-09-29T07:16:41,625   /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-09-29T07:16:41,625      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-09-29T07:16:41,626         |  ^~~~~~~
2023-09-29T07:16:43,907   moleculekit/bondguesser_utils/bondguesser_utils.cpp: In function ‘PyObject* __pyx_pf_11moleculekit_17bondguesser_utils_make_grid_neighborlist_nonperiodic(PyObject*, __Pyx_memviewslice, __pyx_t_11moleculekit_17bondguesser_utils_UINT32_t, __pyx_t_11moleculekit_17bondguesser_utils_UINT32_t, __pyx_t_11moleculekit_17bondguesser_utils_UINT32_t)’:
2023-09-29T07:16:43,908   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19831:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} [-Wsign-compare]
2023-09-29T07:16:43,909   19831 |   for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) {
2023-09-29T07:16:43,909         |                       ~~~~~~~~~~^~~~~~~~~~~
2023-09-29T07:16:43,910   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19843:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} [-Wsign-compare]
2023-09-29T07:16:43,910   19843 |     for (__pyx_t_6 = 0; __pyx_t_6 < __pyx_t_5; __pyx_t_6+=1) {
2023-09-29T07:16:43,911         |                         ~~~~~~~~~~^~~~~~~~~~~
2023-09-29T07:16:43,911   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19855:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} [-Wsign-compare]
2023-09-29T07:16:43,912   19855 |       for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_8; __pyx_t_9+=1) {
2023-09-29T07:16:43,912         |                           ~~~~~~~~~~^~~~~~~~~~~
2023-09-29T07:16:43,913   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19894:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-29T07:16:43,913   19894 |         __pyx_t_12 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-09-29T07:16:43,914         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-29T07:16:43,915   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19933:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-29T07:16:43,915   19933 |         __pyx_t_12 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2023-09-29T07:16:43,916         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-29T07:16:43,917   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19972:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-29T07:16:43,917   19972 |         __pyx_t_12 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-09-29T07:16:43,918         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-29T07:16:43,919   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20011:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-29T07:16:43,919   20011 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-09-29T07:16:43,920         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-29T07:16:43,921   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20017:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-29T07:16:43,921   20017 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2023-09-29T07:16:43,922         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-29T07:16:43,923   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20058:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-29T07:16:43,923   20058 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-09-29T07:16:43,924         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-29T07:16:43,924   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20064:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-29T07:16:43,925   20064 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-09-29T07:16:43,926         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-29T07:16:43,926   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20105:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-29T07:16:43,926   20105 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2023-09-29T07:16:43,927         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-29T07:16:43,927   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20111:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-29T07:16:43,928   20111 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-09-29T07:16:43,928         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-29T07:16:43,929   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20152:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-29T07:16:43,929   20152 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-09-29T07:16:43,930         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-29T07:16:43,930   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20205:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-29T07:16:43,931   20205 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-09-29T07:16:43,931         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-29T07:16:43,932   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20252:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-29T07:16:43,933   20252 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-09-29T07:16:43,933         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-29T07:16:43,934   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20293:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-29T07:16:43,935   20293 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-09-29T07:16:43,936         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-29T07:16:43,936   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20299:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-29T07:16:43,937   20299 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2023-09-29T07:16:43,938         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-29T07:16:43,938   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20305:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-29T07:16:43,939   20305 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-09-29T07:16:43,939         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-29T07:16:43,940   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20352:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-29T07:16:43,941   20352 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2023-09-29T07:16:43,941         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-29T07:16:43,942   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20358:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-29T07:16:43,943   20358 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-09-29T07:16:43,943         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-29T07:16:43,944   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20399:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-29T07:16:43,945   20399 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-09-29T07:16:43,945         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-29T07:16:43,946   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20411:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-29T07:16:43,946   20411 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-09-29T07:16:43,947         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-29T07:16:43,947   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20464:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-09-29T07:16:43,948   20464 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-09-29T07:16:43,948         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-09-29T07:16:43,970   moleculekit/bondguesser_utils/bondguesser_utils.cpp: In function ‘PyObject* __pyx_pf_11moleculekit_17bondguesser_utils_2grid_bonds(PyObject*, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, float, int, __Pyx_memviewslice, __Pyx_memviewslice)’:
2023-09-29T07:16:43,970   moleculekit/bondguesser_utils/bondguesser_utils.cpp:21089:37: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-09-29T07:16:43,971   21089 |       __pyx_t_6 = (__pyx_v_boxneigh == __pyx_v_n_boxes);
2023-09-29T07:16:43,972         |                    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
2023-09-29T07:16:43,972   moleculekit/bondguesser_utils/bondguesser_utils.cpp:21126:37: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-09-29T07:16:43,973   21126 |       __pyx_t_6 = (__pyx_v_boxneigh == __pyx_v_boxidx);
2023-09-29T07:16:43,974         |                    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2023-09-29T07:17:10,371   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/bondguesser_utils/bondguesser_utils.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser_utils.cpython-311-arm-linux-gnueabihf.so
2023-09-29T07:17:10,637   building 'moleculekit.atomselect_utils' extension
2023-09-29T07:17:10,637   creating build/temp.linux-armv7l-cpython-311/moleculekit/atomselect_utils
2023-09-29T07:17:10,638   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/atomselect_utils/atomselect_utils.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/atomselect_utils/atomselect_utils.o -O3
2023-09-29T07:17:10,940   In file included from /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-09-29T07:17:10,940                    from /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-09-29T07:17:10,941                    from /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-09-29T07:17:10,942                    from moleculekit/atomselect_utils/atomselect_utils.cpp:1209:
2023-09-29T07:17:10,942   /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-09-29T07:17:10,943      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-09-29T07:17:10,944         |  ^~~~~~~
2023-09-29T07:17:13,479   moleculekit/atomselect_utils/atomselect_utils.cpp: In function ‘bool __pyx_f_11moleculekit_16atomselect_utils__find_connected_subfragment(int, int, const char*, const char*, const char*, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, std::vector<std::__cxx11::basic_string<char> >&, __Pyx_memviewslice, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&)’:
2023-09-29T07:17:13,480   moleculekit/atomselect_utils/atomselect_utils.cpp:23820:161: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_16atomselect_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-09-29T07:17:13,480   23820 |       __pyx_t_3 = ((*((__pyx_t_11moleculekit_16atomselect_utils_UINT32_t *) ( /* dim=0 */ (__pyx_v_uq_resid.data + __pyx_t_2 * __pyx_v_uq_resid.strides[0]) ))) != __pyx_v_resnum);
2023-09-29T07:17:13,481         |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2023-09-29T07:17:13,488   moleculekit/atomselect_utils/atomselect_utils.cpp: In function ‘bool __pyx_f_11moleculekit_16atomselect_utils__find_subfragments(int, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, std::vector<std::__cxx11::basic_string<char> >&, __Pyx_memviewslice, std::vector<std::vector<int> >&)’:
2023-09-29T07:17:13,489   moleculekit/atomselect_utils/atomselect_utils.cpp:24075:163: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_16atomselect_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-09-29T07:17:13,489   24075 |         __pyx_t_6 = ((*((__pyx_t_11moleculekit_16atomselect_utils_UINT32_t *) ( /* dim=0 */ (__pyx_v_uq_resid.data + __pyx_t_5 * __pyx_v_uq_resid.strides[0]) ))) != __pyx_v_i);
2023-09-29T07:17:13,490         |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-09-29T07:17:13,497   moleculekit/atomselect_utils/atomselect_utils.cpp: In function ‘bool __pyx_f_11moleculekit_16atomselect_utils__find_subfragments_topologically(int, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, std::vector<std::__cxx11::basic_string<char> >&, __Pyx_memviewslice, std::vector<std::vector<int> >&)’:
2023-09-29T07:17:13,497   moleculekit/atomselect_utils/atomselect_utils.cpp:24345:163: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_16atomselect_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-09-29T07:17:13,498   24345 |         __pyx_t_6 = ((*((__pyx_t_11moleculekit_16atomselect_utils_UINT32_t *) ( /* dim=0 */ (__pyx_v_uq_resid.data + __pyx_t_5 * __pyx_v_uq_resid.strides[0]) ))) != __pyx_v_i);
2023-09-29T07:17:13,499         |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-09-29T07:17:48,038   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/atomselect_utils/atomselect_utils.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/atomselect_utils.cpython-311-arm-linux-gnueabihf.so
2023-09-29T07:17:48,330   building 'moleculekit.distance_utils' extension
2023-09-29T07:17:48,331   creating build/temp.linux-armv7l-cpython-311/moleculekit/distance_utils
2023-09-29T07:17:48,332   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/distance_utils/distance_utils.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/distance_utils/distance_utils.o -O3
2023-09-29T07:17:48,872   In file included from /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-09-29T07:17:48,873                    from /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-09-29T07:17:48,873                    from /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-09-29T07:17:48,874                    from moleculekit/distance_utils/distance_utils.cpp:1192:
2023-09-29T07:17:48,874   /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-09-29T07:17:48,875      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-09-29T07:17:48,875         |  ^~~~~~~
2023-09-29T07:18:26,242   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/distance_utils/distance_utils.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/distance_utils.cpython-311-arm-linux-gnueabihf.so
2023-09-29T07:18:26,642   building 'moleculekit.occupancy_utils' extension
2023-09-29T07:18:26,643   creating build/temp.linux-armv7l-cpython-311/moleculekit/occupancy_utils
2023-09-29T07:18:26,644   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/occupancy_utils/occupancy_utils.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/occupancy_utils/occupancy_utils.o -O3
2023-09-29T07:18:26,997   In file included from /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-09-29T07:18:26,998                    from /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-09-29T07:18:26,998                    from /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-09-29T07:18:26,999                    from moleculekit/occupancy_utils/occupancy_utils.cpp:1192:
2023-09-29T07:18:27,000   /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-09-29T07:18:27,000      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-09-29T07:18:27,001         |  ^~~~~~~
2023-09-29T07:18:54,251   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/occupancy_utils/occupancy_utils.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/occupancy_utils.cpython-311-arm-linux-gnueabihf.so
2023-09-29T07:18:54,437   building 'moleculekit.xtc' extension
2023-09-29T07:18:54,438   creating build/temp.linux-armv7l-cpython-311/moleculekit/xtc_utils
2023-09-29T07:18:54,438   creating build/temp.linux-armv7l-cpython-311/moleculekit/xtc_utils/src
2023-09-29T07:18:54,439   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/xtc_utils/src/xdrfile.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/xtc_utils/src/xdrfile.o
2023-09-29T07:18:55,076   moleculekit/xtc_utils/src/xdrfile.cpp:66:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-09-29T07:18:55,077      66 |         "OK",
2023-09-29T07:18:55,077         |         ^~~~
2023-09-29T07:18:55,078   moleculekit/xtc_utils/src/xdrfile.cpp:67:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-09-29T07:18:55,078      67 |         "Header",
2023-09-29T07:18:55,079         |         ^~~~~~~~
2023-09-29T07:18:55,080   moleculekit/xtc_utils/src/xdrfile.cpp:68:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-09-29T07:18:55,080      68 |         "String",
2023-09-29T07:18:55,081         |         ^~~~~~~~
2023-09-29T07:18:55,081   moleculekit/xtc_utils/src/xdrfile.cpp:69:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-09-29T07:18:55,082      69 |         "Double",
2023-09-29T07:18:55,082         |         ^~~~~~~~
2023-09-29T07:18:55,083   moleculekit/xtc_utils/src/xdrfile.cpp:70:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-09-29T07:18:55,083      70 |         "Integer",
2023-09-29T07:18:55,084         |         ^~~~~~~~~
2023-09-29T07:18:55,085   moleculekit/xtc_utils/src/xdrfile.cpp:71:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-09-29T07:18:55,085      71 |         "Float",
2023-09-29T07:18:55,086         |         ^~~~~~~
2023-09-29T07:18:55,087   moleculekit/xtc_utils/src/xdrfile.cpp:72:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-09-29T07:18:55,087      72 |         "Unsigned integer",
2023-09-29T07:18:55,088         |         ^~~~~~~~~~~~~~~~~~
2023-09-29T07:18:55,089   moleculekit/xtc_utils/src/xdrfile.cpp:73:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-09-29T07:18:55,090      73 |         "Compressed 3D coordinate",
2023-09-29T07:18:55,091         |         ^~~~~~~~~~~~~~~~~~~~~~~~~~
2023-09-29T07:18:55,091   moleculekit/xtc_utils/src/xdrfile.cpp:74:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-09-29T07:18:55,092      74 |         "Closing file",
2023-09-29T07:18:55,093         |         ^~~~~~~~~~~~~~
2023-09-29T07:18:55,094   moleculekit/xtc_utils/src/xdrfile.cpp:75:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-09-29T07:18:55,094      75 |         "Magic number",
2023-09-29T07:18:55,095         |         ^~~~~~~~~~~~~~
2023-09-29T07:18:55,096   moleculekit/xtc_utils/src/xdrfile.cpp:76:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-09-29T07:18:55,096      76 |         "Not enough memory",
2023-09-29T07:18:55,097         |         ^~~~~~~~~~~~~~~~~~~
2023-09-29T07:18:55,097   moleculekit/xtc_utils/src/xdrfile.cpp:77:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-09-29T07:18:55,098      77 |         "End of file",
2023-09-29T07:18:55,099         |         ^~~~~~~~~~~~~
2023-09-29T07:18:55,099   moleculekit/xtc_utils/src/xdrfile.cpp:78:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-09-29T07:18:55,100      78 |         "File not found"
2023-09-29T07:18:55,101         |         ^~~~~~~~~~~~~~~~
2023-09-29T07:18:55,102   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int sizeofint(int)’:
2023-09-29T07:18:55,102   moleculekit/xtc_utils/src/xdrfile.cpp:459:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-29T07:18:55,103     459 |     while (size >= num && num_of_bits < 32)
2023-09-29T07:18:55,104         |            ~~~~~^~~~~~
2023-09-29T07:18:55,105   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int sizeofints(int, unsigned int*)’:
2023-09-29T07:18:55,105   moleculekit/xtc_utils/src/xdrfile.cpp:505:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-09-29T07:18:55,106     505 |     while (bytes[num_of_bytes] >= num)
2023-09-29T07:18:55,106         |            ~~~~~~~~~~~~~~~~~~~~^~~~~~
2023-09-29T07:18:55,106   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘void encodeints(int*, int, int, unsigned int*, unsigned int*)’:
2023-09-29T07:18:55,107   moleculekit/xtc_utils/src/xdrfile.cpp:614:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-29T07:18:55,108     614 |     if (num_of_bits >= num_of_bytes * 8)
2023-09-29T07:18:55,108         |         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
2023-09-29T07:18:55,109   moleculekit/xtc_utils/src/xdrfile.cpp:616:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-29T07:18:55,109     616 |                 for (i = 0; i < num_of_bytes; i++)
2023-09-29T07:18:55,110         |                             ~~^~~~~~~~~~~~~~
2023-09-29T07:18:55,110   moleculekit/xtc_utils/src/xdrfile.cpp:624:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-29T07:18:55,111     624 |                 for (i = 0; i < num_of_bytes-1; i++)
2023-09-29T07:18:55,111         |                             ~~^~~~~~~~~~~~~~~~
2023-09-29T07:18:55,112   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int decodebits(int*, int)’:
2023-09-29T07:18:55,112   moleculekit/xtc_utils/src/xdrfile.cpp:664:30: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-09-29T07:18:55,113     664 |                 if (lastbits < num_of_bits)
2023-09-29T07:18:55,114         |                     ~~~~~~~~~^~~~~~~~~~~~~
2023-09-29T07:18:55,114   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_decompress_coord_float(float*, int*, float*, XDRFILE*)’:
2023-09-29T07:18:55,115   moleculekit/xtc_utils/src/xdrfile.cpp:785:17: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-09-29T07:18:55,116     785 |         if(size3>xfp->buf1size)
2023-09-29T07:18:55,117         |            ~~~~~^~~~~~~~~~~~~~
2023-09-29T07:18:55,117   moleculekit/xtc_utils/src/xdrfile.cpp:842:26: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-09-29T07:18:55,118     842 |         maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-09-29T07:18:55,119         |                          ^
2023-09-29T07:18:55,119   moleculekit/xtc_utils/src/xdrfile.cpp:932:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-29T07:18:55,120     932 |                                 if(countmjh >= size3 ) { return -1; }
2023-09-29T07:18:55,121         |                                    ~~~~~~~~~^~~~~~~~
2023-09-29T07:18:55,121   moleculekit/xtc_utils/src/xdrfile.cpp:935:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-29T07:18:55,122     935 |                                 if(countmjh >= size3 ) { return -1; }
2023-09-29T07:18:55,122         |                                    ~~~~~~~~~^~~~~~~~
2023-09-29T07:18:55,123   moleculekit/xtc_utils/src/xdrfile.cpp:938:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-29T07:18:55,124     938 |                                 if(countmjh >= size3 ) { return -1; }
2023-09-29T07:18:55,125         |                                    ~~~~~~~~~^~~~~~~~
2023-09-29T07:18:55,126   moleculekit/xtc_utils/src/xdrfile.cpp:945:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-29T07:18:55,127     945 |                                 if(countmjh >= size3 ) { return -1; }
2023-09-29T07:18:55,127         |                                    ~~~~~~~~~^~~~~~~~
2023-09-29T07:18:55,128   moleculekit/xtc_utils/src/xdrfile.cpp:948:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-29T07:18:55,128     948 |                                 if(countmjh >= size3 ) { return -1; }
2023-09-29T07:18:55,129         |                                    ~~~~~~~~~^~~~~~~~
2023-09-29T07:18:55,129   moleculekit/xtc_utils/src/xdrfile.cpp:951:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-29T07:18:55,130     951 |                                 if(countmjh >= size3 ) { return -1; }
2023-09-29T07:18:55,130         |                                    ~~~~~~~~~^~~~~~~~
2023-09-29T07:18:55,130   moleculekit/xtc_utils/src/xdrfile.cpp:756:24: warning: variable ‘minidx’ set but not used [-Wunused-but-set-variable]
2023-09-29T07:18:55,131     756 |         int smallidx,  minidx, maxidx;
2023-09-29T07:18:55,132         |                        ^~~~~~
2023-09-29T07:18:55,132   moleculekit/xtc_utils/src/xdrfile.cpp:759:32: warning: variable ‘larger’ set but not used [-Wunused-but-set-variable]
2023-09-29T07:18:55,132     759 |         int smallnum, smaller, larger, i, is_smaller, run;
2023-09-29T07:18:55,133         |                                ^~~~~~
2023-09-29T07:18:55,134   moleculekit/xtc_utils/src/xdrfile.cpp:763:13: warning: unused variable ‘errval’ [-Wunused-variable]
2023-09-29T07:18:55,135     763 |         int errval=1;
2023-09-29T07:18:55,135         |             ^~~~~~
2023-09-29T07:18:55,136   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_compress_coord_float(float*, int, float, XDRFILE*)’:
2023-09-29T07:18:55,136   moleculekit/xtc_utils/src/xdrfile.cpp:1011:17: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-09-29T07:18:55,137    1011 |         if(size3>xfp->buf1size)
2023-09-29T07:18:55,138         |            ~~~~~^~~~~~~~~~~~~~
2023-09-29T07:18:55,139   moleculekit/xtc_utils/src/xdrfile.cpp:1068:41: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-29T07:18:55,139    1068 |                 countmjh++; if( countmjh> size3) { return -1; }
2023-09-29T07:18:55,140         |                                 ~~~~~~~~^~~~~~~
2023-09-29T07:18:55,141   moleculekit/xtc_utils/src/xdrfile.cpp:1084:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-29T07:18:55,142    1084 |           countmjh++; if( countmjh> size3) { return -1; }
2023-09-29T07:18:55,142         |                           ~~~~~~~~^~~~~~~
2023-09-29T07:18:55,143   moleculekit/xtc_utils/src/xdrfile.cpp:1098:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-29T07:18:55,143    1098 |           countmjh++; if( countmjh> size3) { return -1; }
2023-09-29T07:18:55,144         |                           ~~~~~~~~^~~~~~~
2023-09-29T07:18:55,145   moleculekit/xtc_utils/src/xdrfile.cpp:1137:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-29T07:18:55,145    1137 |         while (smallidx < LASTIDX && magicints[smallidx] < mindiff)
2023-09-29T07:18:55,146         |                         ^
2023-09-29T07:18:55,147   moleculekit/xtc_utils/src/xdrfile.cpp:1143:26: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-09-29T07:18:55,147    1143 |         maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-09-29T07:18:55,148         |                          ^
2023-09-29T07:18:55,149   moleculekit/xtc_utils/src/xdrfile.cpp:1275:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-29T07:18:55,150    1275 |         if(tmp==(unsigned int)buf2[0])
2023-09-29T07:18:55,150         |            ~~~^~~~~~~~~~~~~~~~~~~~~~~
2023-09-29T07:18:55,151   moleculekit/xtc_utils/src/xdrfile.cpp:1001:13: warning: variable ‘errval’ set but not used [-Wunused-but-set-variable]
2023-09-29T07:18:55,151    1001 |         int errval;
2023-09-29T07:18:55,152         |             ^~~~~~
2023-09-29T07:18:55,152   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_decompress_coord_double(double*, int*, double*, XDRFILE*)’:
2023-09-29T07:18:55,153   moleculekit/xtc_utils/src/xdrfile.cpp:1316:17: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-09-29T07:18:55,153    1316 |         if(size3>xfp->buf1size)
2023-09-29T07:18:55,154         |            ~~~~~^~~~~~~~~~~~~~
2023-09-29T07:18:55,154   moleculekit/xtc_utils/src/xdrfile.cpp:1377:26: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-09-29T07:18:55,155    1377 |         maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-09-29T07:18:55,155         |                          ^
2023-09-29T07:18:55,156   moleculekit/xtc_utils/src/xdrfile.cpp:1289:32: warning: variable ‘minidx’ set but not used [-Wunused-but-set-variable]
2023-09-29T07:18:55,156    1289 |         int smallidx,  maxidx, minidx;
2023-09-29T07:18:55,157         |                                ^~~~~~
2023-09-29T07:18:55,158   moleculekit/xtc_utils/src/xdrfile.cpp:1292:32: warning: variable ‘larger’ set but not used [-Wunused-but-set-variable]
2023-09-29T07:18:55,159    1292 |         int smallnum, smaller, larger, i, is_smaller, run;
2023-09-29T07:18:55,159         |                                ^~~~~~
2023-09-29T07:18:55,160   moleculekit/xtc_utils/src/xdrfile.cpp:1297:13: warning: unused variable ‘errval’ [-Wunused-variable]
2023-09-29T07:18:55,161    1297 |         int errval=1;
2023-09-29T07:18:55,161         |             ^~~~~~
2023-09-29T07:18:55,162   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_compress_coord_double(double*, int, double, XDRFILE*)’:
2023-09-29T07:18:55,163   moleculekit/xtc_utils/src/xdrfile.cpp:1513:17: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-09-29T07:18:55,163    1513 |         if(size3>xfp->buf1size) {
2023-09-29T07:18:55,164         |            ~~~~~^~~~~~~~~~~~~~
2023-09-29T07:18:55,165   moleculekit/xtc_utils/src/xdrfile.cpp:1628:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-29T07:18:55,165    1628 |         while (smallidx < LASTIDX && magicints[smallidx] < mindiff) {
2023-09-29T07:18:55,166         |                         ^
2023-09-29T07:18:55,167   moleculekit/xtc_utils/src/xdrfile.cpp:1633:26: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-09-29T07:18:55,167    1633 |         maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-09-29T07:18:55,168         |                          ^
2023-09-29T07:18:55,169   moleculekit/xtc_utils/src/xdrfile.cpp:1743:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-09-29T07:18:55,169    1743 |         if(tmp==(unsigned int)buf2[0])
2023-09-29T07:18:55,170         |            ~~~^~~~~~~~~~~~~~~~~~~~~~~
2023-09-29T07:18:55,171   moleculekit/xtc_utils/src/xdrfile.cpp:1504:13: warning: variable ‘errval’ set but not used [-Wunused-but-set-variable]
2023-09-29T07:18:55,172    1504 |         int errval=1;
2023-09-29T07:18:55,173         |             ^~~~~~
2023-09-29T07:18:58,005   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/xtc_utils/src/xdrfile_xtc.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/xtc_utils/src/xdrfile_xtc.o
2023-09-29T07:18:58,272   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/xtc_utils/src/xtc.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/xtc_utils/src/xtc.o
2023-09-29T07:18:59,254   moleculekit/xtc_utils/src/xtc.cpp: In function ‘void xtc_read_new(char*, float*, float*, float*, int*, int, int)’:
2023-09-29T07:18:59,255   moleculekit/xtc_utils/src/xtc.cpp:207:13: warning: unused variable ‘nf3’ [-Wunused-variable]
2023-09-29T07:18:59,264     207 |         int nf3 = nframes * 3; // Precalculate 3 * nframes for the coordinate lookup macro
2023-09-29T07:18:59,265         |             ^~~
2023-09-29T07:18:59,265   moleculekit/xtc_utils/src/xtc.cpp: In function ‘int xtc_write(char*, int, int, int*, float*, float*, float*)’:
2023-09-29T07:18:59,266   moleculekit/xtc_utils/src/xtc.cpp:418:13: warning: unused variable ‘nf3’ [-Wunused-variable]
2023-09-29T07:18:59,267     418 |         int nf3 = nframes * 3;
2023-09-29T07:18:59,268         |             ^~~
2023-09-29T07:18:59,272   moleculekit/xtc_utils/src/xtc.cpp: In function ‘void xtc_read_frame(char*, float*, float*, float*, int*, int, int, int, int)’:
2023-09-29T07:18:59,272   moleculekit/xtc_utils/src/xtc.cpp:491:13: warning: unused variable ‘reading_index’ [-Wunused-variable]
2023-09-29T07:18:59,273     491 |         int reading_index = 0;
2023-09-29T07:18:59,276         |             ^~~~~~~~~~~~~
2023-09-29T07:18:59,277   moleculekit/xtc_utils/src/xtc.cpp:492:13: warning: unused variable ‘writing_index’ [-Wunused-variable]
2023-09-29T07:18:59,278     492 |         int writing_index = 0;
2023-09-29T07:18:59,278         |             ^~~~~~~~~~~~~
2023-09-29T07:19:01,408   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/xtc_utils/xtc.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/xtc_utils/xtc.o
2023-09-29T07:19:01,730   In file included from /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-09-29T07:19:01,730                    from /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-09-29T07:19:01,731                    from /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-09-29T07:19:01,731                    from moleculekit/xtc_utils/xtc.cpp:1196:
2023-09-29T07:19:01,732   /tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-09-29T07:19:01,733      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-09-29T07:19:01,733         |  ^~~~~~~
2023-09-29T07:19:25,686   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/xtc_utils/src/xdrfile.o build/temp.linux-armv7l-cpython-311/moleculekit/xtc_utils/src/xdrfile_xtc.o build/temp.linux-armv7l-cpython-311/moleculekit/xtc_utils/src/xtc.o build/temp.linux-armv7l-cpython-311/moleculekit/xtc_utils/xtc.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/xtc.cpython-311-arm-linux-gnueabihf.so
2023-09-29T07:19:25,970   building 'moleculekit.tmalign' extension
2023-09-29T07:19:25,970   creating build/temp.linux-armv7l-cpython-311/moleculekit/tmalign
2023-09-29T07:19:25,971   creating build/temp.linux-armv7l-cpython-311/moleculekit/tmalign/src
2023-09-29T07:19:25,973   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/tmalign -Imoleculekit/tmalign/include/ -Imoleculekit/tmalign/ -I/tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/tmalign/src/TMAlign.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/tmalign/src/TMAlign.o -w
2023-09-29T07:19:59,864   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/tmalign -Imoleculekit/tmalign/include/ -Imoleculekit/tmalign/ -I/tmp/pip-build-env-ox479alp/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/tmalign/tmalign_util.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/tmalign/tmalign_util.o -w
2023-09-29T07:20:22,451   In file included from /usr/include/c++/12/vector:70,
2023-09-29T07:20:22,451                    from moleculekit/tmalign/tmalign_util.cpp:1207:
2023-09-29T07:20:22,452   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]’:
2023-09-29T07:20:22,452   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2023-09-29T07:20:22,453     439 |       vector<_Tp, _Alloc>::
2023-09-29T07:20:22,454         |       ^~~~~~~~~~~~~~~~~~~
2023-09-29T07:20:23,255   In file included from /usr/include/c++/12/vector:64:
2023-09-29T07:20:23,255   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2023-09-29T07:20:23,256       inlined from ‘PyObject* __pyx_pf_11moleculekit_7tmalign_tmalign(PyObject*, __Pyx_memviewslice, __Pyx_memviewslice, std::string, std::string)’ at moleculekit/tmalign/tmalign_util.cpp:20812:32,
2023-09-29T07:20:23,257       inlined from ‘PyObject* __pyx_pw_11moleculekit_7tmalign_1tmalign(PyObject*, PyObject* const*, Py_ssize_t, PyObject*)’ at moleculekit/tmalign/tmalign_util.cpp:20297:52:
2023-09-29T07:20:23,258   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2023-09-29T07:20:23,258    1287 |           _M_realloc_insert(end(), __x);
2023-09-29T07:20:23,259         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-09-29T07:20:23,260   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2023-09-29T07:20:23,260       inlined from ‘PyObject* __pyx_pf_11moleculekit_7tmalign_tmalign(PyObject*, __Pyx_memviewslice, __Pyx_memviewslice, std::string, std::string)’ at moleculekit/tmalign/tmalign_util.cpp:20826:33,
2023-09-29T07:20:23,261       inlined from ‘PyObject* __pyx_pw_11moleculekit_7tmalign_1tmalign(PyObject*, PyObject* const*, Py_ssize_t, PyObject*)’ at moleculekit/tmalign/tmalign_util.cpp:20297:52:
2023-09-29T07:20:23,262   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2023-09-29T07:20:23,262    1287 |           _M_realloc_insert(end(), __x);
2023-09-29T07:20:23,263         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-09-29T07:20:23,264   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2023-09-29T07:20:23,264       inlined from ‘PyObject* __pyx_pf_11moleculekit_7tmalign_tmalign(PyObject*, __Pyx_memviewslice, __Pyx_memviewslice, std::string, std::string)’ at moleculekit/tmalign/tmalign_util.cpp:20911:34,
2023-09-29T07:20:23,265       inlined from ‘PyObject* __pyx_pw_11moleculekit_7tmalign_1tmalign(PyObject*, PyObject* const*, Py_ssize_t, PyObject*)’ at moleculekit/tmalign/tmalign_util.cpp:20297:52:
2023-09-29T07:20:23,265   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2023-09-29T07:20:23,266    1287 |           _M_realloc_insert(end(), __x);
2023-09-29T07:20:23,266         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-09-29T07:20:25,689   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/tmalign/src/TMAlign.o build/temp.linux-armv7l-cpython-311/moleculekit/tmalign/tmalign_util.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/tmalign.cpython-311-arm-linux-gnueabihf.so
2023-09-29T07:20:26,075   UPDATING build/lib.linux-armv7l-cpython-311/moleculekit/_version.py
2023-09-29T07:20:26,076   set build/lib.linux-armv7l-cpython-311/moleculekit/_version.py to '1.7.13'
2023-09-29T07:20:26,076   installing to build/bdist.linux-armv7l/wheel
2023-09-29T07:20:26,077   running install
2023-09-29T07:20:26,101   running install_lib
2023-09-29T07:20:26,107   creating build/bdist.linux-armv7l
2023-09-29T07:20:26,108   creating build/bdist.linux-armv7l/wheel
2023-09-29T07:20:26,110   creating build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:26,112   copying build/lib.linux-armv7l-cpython-311/moleculekit/molecule.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:26,117   creating build/bdist.linux-armv7l/wheel/moleculekit/occupancy_utils
2023-09-29T07:20:26,118   copying build/lib.linux-armv7l-cpython-311/moleculekit/occupancy_utils/occupancy_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/occupancy_utils
2023-09-29T07:20:26,138   copying build/lib.linux-armv7l-cpython-311/moleculekit/occupancy_utils/occupancy_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/occupancy_utils
2023-09-29T07:20:26,140   creating build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-09-29T07:20:26,141   copying build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/tmalign_util.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-09-29T07:20:26,162   creating build/bdist.linux-armv7l/wheel/moleculekit/tmalign/src
2023-09-29T07:20:26,163   copying build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/src/TMAlign.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign/src
2023-09-29T07:20:26,169   copying build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/tmalignlib.pxd -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-09-29T07:20:26,171   copying build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/tmalign_util.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-09-29T07:20:26,174   creating build/bdist.linux-armv7l/wheel/moleculekit/tmalign/include
2023-09-29T07:20:26,175   copying build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/include/TMAlign.h -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign/include
2023-09-29T07:20:26,177   creating build/bdist.linux-armv7l/wheel/moleculekit/wrapping
2023-09-29T07:20:26,178   copying build/lib.linux-armv7l-cpython-311/moleculekit/wrapping/wrapping.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/wrapping
2023-09-29T07:20:26,205   copying build/lib.linux-armv7l-cpython-311/moleculekit/wrapping/wrapping.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/wrapping
2023-09-29T07:20:26,207   copying build/lib.linux-armv7l-cpython-311/moleculekit/logging.ini -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:26,210   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx
2023-09-29T07:20:26,211   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx
2023-09-29T07:20:26,213   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-09-29T07:20:26,214   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader/PdbxReader.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-09-29T07:20:26,217   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-09-29T07:20:26,218   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader/PdbxContainers.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-09-29T07:20:26,221   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader/PdbxParser.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-09-29T07:20:26,224   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-09-29T07:20:26,225   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests/PdbxReadWriteTests.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-09-29T07:20:26,227   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests/PdbxReaderTests.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-09-29T07:20:26,230   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-09-29T07:20:26,231   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests/PdbxWriterTests.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-09-29T07:20:26,233   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx/writer
2023-09-29T07:20:26,234   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/writer/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/writer
2023-09-29T07:20:26,236   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/writer/PdbxWriter.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/writer
2023-09-29T07:20:26,238   copying build/lib.linux-armv7l-cpython-311/moleculekit/periodictable.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:26,241   creating build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-09-29T07:20:26,242   copying build/lib.linux-armv7l-cpython-311/moleculekit/atomselect/analyze.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-09-29T07:20:26,244   copying build/lib.linux-armv7l-cpython-311/moleculekit/atomselect/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-09-29T07:20:26,246   copying build/lib.linux-armv7l-cpython-311/moleculekit/atomselect/atomselect.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-09-29T07:20:26,248   copying build/lib.linux-armv7l-cpython-311/moleculekit/atomselect/languageparser.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-09-29T07:20:26,251   creating build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-09-29T07:20:26,254   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/smallmol.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-09-29T07:20:26,257   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/test_smallmollib.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-09-29T07:20:26,259   creating build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-09-29T07:20:26,260   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-09-29T07:20:26,262   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools/test_tools.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-09-29T07:20:26,264   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools/restrainedembed.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-09-29T07:20:26,266   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools/clustering.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-09-29T07:20:26,269   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-09-29T07:20:26,270   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/smallmollib.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-09-29T07:20:26,273   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/util.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-09-29T07:20:26,275   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/test_smallmol.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-09-29T07:20:26,278   creating build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-09-29T07:20:26,278   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/preparation.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-09-29T07:20:26,282   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/preparation_customres.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-09-29T07:20:26,284   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/graphalignment.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-09-29T07:20:26,286   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/detect.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-09-29T07:20:26,289   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-09-29T07:20:26,290   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/voxeldescriptors.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-09-29T07:20:26,293   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/sequencestructuralalignment.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-09-29T07:20:26,295   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/moleculechecks.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-09-29T07:20:26,297   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/docking.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-09-29T07:20:26,299   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/atomtyper.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-09-29T07:20:26,302   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/hhblitsprofile.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-09-29T07:20:26,304   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/crystalpacking.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-09-29T07:20:26,306   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/autosegment.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-09-29T07:20:26,309   creating build/bdist.linux-armv7l/wheel/moleculekit/tools/obabel_tools
2023-09-29T07:20:26,310   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/obabel_tools/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools/obabel_tools
2023-09-29T07:20:26,312   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/obabel_tools/obabel_cli.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools/obabel_tools
2023-09-29T07:20:26,314   creating build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-29T07:20:26,316   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricdistance.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-29T07:20:26,318   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricsecondarystructure.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-29T07:20:26,321   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-29T07:20:26,323   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricdihedral.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-29T07:20:26,326   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricshell.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-29T07:20:26,328   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/projection.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-29T07:20:26,329   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricrmsd.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-29T07:20:26,331   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricplumed2.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-29T07:20:26,334   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricsasa.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-29T07:20:26,336   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricsphericalcoordinate.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-29T07:20:26,339   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metrictmscore.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-29T07:20:26,341   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricgyration.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-29T07:20:26,343   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/util.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-29T07:20:26,345   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricfluctuation.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-29T07:20:26,347   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metriccoordinate.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-09-29T07:20:26,350   copying build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser_utils.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:26,371   copying build/lib.linux-armv7l-cpython-311/moleculekit/writers.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:26,374   creating build/bdist.linux-armv7l/wheel/moleculekit/atomselect_utils
2023-09-29T07:20:26,375   copying build/lib.linux-armv7l-cpython-311/moleculekit/atomselect_utils/atomselect_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect_utils
2023-09-29T07:20:26,378   copying build/lib.linux-armv7l-cpython-311/moleculekit/atomselect_utils/atomselect_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect_utils
2023-09-29T07:20:26,404   copying build/lib.linux-armv7l-cpython-311/moleculekit/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:26,406   creating build/bdist.linux-armv7l/wheel/moleculekit/share
2023-09-29T07:20:26,407   creating build/bdist.linux-armv7l/wheel/moleculekit/share/atomselect
2023-09-29T07:20:26,408   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/atomselect/atomselect.json -> build/bdist.linux-armv7l/wheel/moleculekit/share/atomselect
2023-09-29T07:20:26,410   creating build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr
2023-09-29T07:20:26,414   creating build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,415   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MEA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,417   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/BCS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,419   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HLU.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,421   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ALY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,422   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/YCM.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,424   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MVA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,426   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MLY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,428   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/IIL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,429   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/2MR.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,431   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/KYN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,432   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/PRK.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,434   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/PCA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,436   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/M3L.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,438   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ORM.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,439   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/M3L.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,441   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ALY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,443   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NAL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,445   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/D4P.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,447   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MVA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,449   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ALC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,451   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/004.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,453   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/KYN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,455   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ALC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,457   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ORM.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,459   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/PCA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,461   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/IML.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,463   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MEQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,465   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HYP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,467   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CCS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,469   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/GHG.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,470   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,472   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/PRK.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,474   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TYQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,476   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MEN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,477   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HTR.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,479   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TRO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,481   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ALN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,482   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/IIL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,484   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/DAH.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,486   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/LYZ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,488   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HTR.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,490   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/DA2.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,492   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/4PH.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,494   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MME.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,495   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/LMQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,497   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HHK.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,499   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/4PQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,501   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NVA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,503   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/2AS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,506   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/2ML.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,507   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HLX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
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2023-09-29T07:20:26,511   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,513   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/IGL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,514   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/FGL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,516   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/0BN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
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2023-09-29T07:20:26,521   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NVA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,522   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/IGL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
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2023-09-29T07:20:26,526   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/1MH.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,528   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/0AF.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,530   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TPO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,532   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MEN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,534   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HLX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,536   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/OCY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
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2023-09-29T07:20:26,540   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
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2023-09-29T07:20:26,543   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/BTK.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
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2023-09-29T07:20:26,554   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/0BN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
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2023-09-29T07:20:26,558   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/APD.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
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2023-09-29T07:20:26,564   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,566   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ONL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
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2023-09-29T07:20:26,580   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NZC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,582   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/LME.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,584   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/LMQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,585   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/AHP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
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2023-09-29T07:20:26,594   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/4PQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,596   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/FGL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
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2023-09-29T07:20:26,599   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/SEP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,601   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HQA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
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2023-09-29T07:20:26,604   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MLZ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,606   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MME.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,608   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/IML.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
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2023-09-29T07:20:26,611   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/0AF.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,613   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HOX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,615   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HPE.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
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2023-09-29T07:20:26,618   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CGU.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,620   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MLE.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,622   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HPE.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,624   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ABA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,625   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,627   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ESC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,629   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/DPP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,630   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TPO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,632   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,634   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/BB8.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,635   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/03Y.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,637   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/PTR.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,639   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MLZ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,640   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/GME.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,642   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/PTR.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,649   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MLE.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,650   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/SEP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,652   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HQA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,654   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/2AS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,656   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/YCM.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
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2023-09-29T07:20:26,659   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MLY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,661   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/GNC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,663   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/APD.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,665   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NLE.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,666   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HLU.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,668   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/P1L.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,670   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/D4P.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,672   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/LME.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,673   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ABA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,675   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MEQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,677   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/DAH.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,679   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/YNM.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,680   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NCY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,682   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/AHP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,684   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/AA4.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,686   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/I2M.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,687   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/2GX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,689   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MMO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,691   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HHK.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,693   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TY2.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,694   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/BTK.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,696   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/LYZ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,698   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NAL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,700   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/4IN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,702   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TYQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,704   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/DAB.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,706   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/GME.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,708   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ME0.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,710   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/AA4.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,712   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/5JP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,713   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CGU.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,715   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ALN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,717   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,719   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NCY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,720   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TRO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,722   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HOX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,724   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ME0.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,725   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/0A1.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,727   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/GNC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,729   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/.gitkeep -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,730   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/OMX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-09-29T07:20:26,732   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/ALA.cif -> build/bdist.linux-armv7l/wheel/moleculekit/share
2023-09-29T07:20:26,734   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/opm_sequences.json -> build/bdist.linux-armv7l/wheel/moleculekit/share
2023-09-29T07:20:26,942   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/backbone.cif -> build/bdist.linux-armv7l/wheel/moleculekit/share
2023-09-29T07:20:26,944   copying build/lib.linux-armv7l-cpython-311/moleculekit/dihedral.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:26,946   copying build/lib.linux-armv7l-cpython-311/moleculekit/home.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:26,948   copying build/lib.linux-armv7l-cpython-311/moleculekit/opm.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:26,950   creating build/bdist.linux-armv7l/wheel/moleculekit/bondguesser_utils
2023-09-29T07:20:26,951   copying build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser_utils/bondguesser_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/bondguesser_utils
2023-09-29T07:20:26,975   copying build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser_utils/bondguesser_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/bondguesser_utils
2023-09-29T07:20:26,977   copying build/lib.linux-armv7l-cpython-311/moleculekit/vmdviewer.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:26,980   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-09-29T07:20:26,981   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/pipi.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-09-29T07:20:27,002   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-09-29T07:20:27,004   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/pipi
2023-09-29T07:20:27,005   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/pipi/pipi.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/pipi
2023-09-29T07:20:27,009   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/pipi/pipi.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/pipi
2023-09-29T07:20:27,030   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/interactions.py -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-09-29T07:20:27,032   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/hbonds.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-09-29T07:20:27,053   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-09-29T07:20:27,079   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/hbonds
2023-09-29T07:20:27,080   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/hbonds/hbonds.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/hbonds
2023-09-29T07:20:27,100   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/hbonds/hbonds.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/hbonds
2023-09-29T07:20:27,103   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/cationpi
2023-09-29T07:20:27,104   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/cationpi/cationpi.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/cationpi
2023-09-29T07:20:27,123   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/cationpi/cationpi.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/cationpi
2023-09-29T07:20:27,126   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/cationpi.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-09-29T07:20:27,151   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/sigmahole
2023-09-29T07:20:27,152   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole/sigmahole.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/sigmahole
2023-09-29T07:20:27,174   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole/sigmahole.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/sigmahole
2023-09-29T07:20:27,176   copying build/lib.linux-armv7l-cpython-311/moleculekit/rcsb.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:27,178   copying build/lib.linux-armv7l-cpython-311/moleculekit/_version.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:27,180   copying build/lib.linux-armv7l-cpython-311/moleculekit/viewer.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:27,182   copying build/lib.linux-armv7l-cpython-311/moleculekit/align.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:27,184   copying build/lib.linux-armv7l-cpython-311/moleculekit/rdkitintegration.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:27,186   copying build/lib.linux-armv7l-cpython-311/moleculekit/pymolgraphics.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:27,188   copying build/lib.linux-armv7l-cpython-311/moleculekit/vmd_wrapper -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:27,190   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:27,218   copying build/lib.linux-armv7l-cpython-311/moleculekit/distance_utils.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:27,242   copying build/lib.linux-armv7l-cpython-311/moleculekit/vmdgraphics.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:27,245   copying build/lib.linux-armv7l-cpython-311/moleculekit/atomselect_utils.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:27,270   creating build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-09-29T07:20:27,271   creating build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-09-29T07:20:27,272   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/src/xdrfile.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-09-29T07:20:27,275   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/src/xtc.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-09-29T07:20:27,278   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/src/xdrfile_xtc.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-09-29T07:20:27,279   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/xtclib.pxd -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-09-29T07:20:27,281   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/xtc.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-09-29T07:20:27,301   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/xtc.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-09-29T07:20:27,303   creating build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-09-29T07:20:27,304   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/include/xdrfile_xtc.h -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-09-29T07:20:27,306   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/include/xdrfile.h -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-09-29T07:20:27,308   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/include/xtc.h -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-09-29T07:20:27,310   copying build/lib.linux-armv7l-cpython-311/moleculekit/config.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:27,312   copying build/lib.linux-armv7l-cpython-311/moleculekit/version.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:27,313   copying build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:27,315   copying build/lib.linux-armv7l-cpython-311/moleculekit/util.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:27,318   creating build/bdist.linux-armv7l/wheel/moleculekit/distance_utils
2023-09-29T07:20:27,319   copying build/lib.linux-armv7l-cpython-311/moleculekit/distance_utils/distance_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/distance_utils
2023-09-29T07:20:27,356   copying build/lib.linux-armv7l-cpython-311/moleculekit/distance_utils/distance_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/distance_utils
2023-09-29T07:20:27,359   copying build/lib.linux-armv7l-cpython-311/moleculekit/readers.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:27,365   copying build/lib.linux-armv7l-cpython-311/moleculekit/tmalign.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:27,429   copying build/lib.linux-armv7l-cpython-311/moleculekit/wrapping.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:27,450   copying build/lib.linux-armv7l-cpython-311/moleculekit/distance.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:27,453   creating build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-09-29T07:20:27,454   copying build/lib.linux-armv7l-cpython-311/moleculekit/ply/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-09-29T07:20:27,456   copying build/lib.linux-armv7l-cpython-311/moleculekit/ply/yacc.py -> build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-09-29T07:20:27,460   copying build/lib.linux-armv7l-cpython-311/moleculekit/ply/lex.py -> build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-09-29T07:20:27,463   copying build/lib.linux-armv7l-cpython-311/moleculekit/occupancy_utils.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-09-29T07:20:27,483   running install_egg_info
2023-09-29T07:20:27,489   Copying moleculekit.egg-info to build/bdist.linux-armv7l/wheel/moleculekit-1.7.13-py3.11.egg-info
2023-09-29T07:20:27,502   running install_scripts
2023-09-29T07:20:27,551   creating build/bdist.linux-armv7l/wheel/moleculekit-1.7.13.dist-info/WHEEL
2023-09-29T07:20:27,554   creating '/tmp/pip-wheel-nznox26u/.tmp-ks3o7_4g/moleculekit-1.7.13-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-09-29T07:20:27,557   adding 'moleculekit/__init__.py'
2023-09-29T07:20:27,558   adding 'moleculekit/_version.py'
2023-09-29T07:20:27,560   adding 'moleculekit/align.py'
2023-09-29T07:20:27,891   adding 'moleculekit/atomselect_utils.cpython-311-arm-linux-gnueabihf.so'
2023-09-29T07:20:27,906   adding 'moleculekit/bondguesser.py'
2023-09-29T07:20:28,152   adding 'moleculekit/bondguesser_utils.cpython-311-arm-linux-gnueabihf.so'
2023-09-29T07:20:28,162   adding 'moleculekit/config.py'
2023-09-29T07:20:28,163   adding 'moleculekit/dihedral.py'
2023-09-29T07:20:28,164   adding 'moleculekit/distance.py'
2023-09-29T07:20:28,464   adding 'moleculekit/distance_utils.cpython-311-arm-linux-gnueabihf.so'
2023-09-29T07:20:28,477   adding 'moleculekit/home.py'
2023-09-29T07:20:28,478   adding 'moleculekit/logging.ini'
2023-09-29T07:20:28,491   adding 'moleculekit/molecule.py'
2023-09-29T07:20:28,720   adding 'moleculekit/occupancy_utils.cpython-311-arm-linux-gnueabihf.so'
2023-09-29T07:20:28,730   adding 'moleculekit/opm.py'
2023-09-29T07:20:28,732   adding 'moleculekit/periodictable.py'
2023-09-29T07:20:28,733   adding 'moleculekit/pymolgraphics.py'
2023-09-29T07:20:28,735   adding 'moleculekit/rcsb.py'
2023-09-29T07:20:28,736   adding 'moleculekit/rdkitintegration.py'
2023-09-29T07:20:28,750   adding 'moleculekit/readers.py'
2023-09-29T07:20:29,353   adding 'moleculekit/tmalign.cpython-311-arm-linux-gnueabihf.so'
2023-09-29T07:20:29,380   adding 'moleculekit/util.py'
2023-09-29T07:20:29,381   adding 'moleculekit/version.py'
2023-09-29T07:20:29,383   adding 'moleculekit/viewer.py'
2023-09-29T07:20:29,384   adding 'moleculekit/vmd_wrapper'
2023-09-29T07:20:29,386   adding 'moleculekit/vmdgraphics.py'
2023-09-29T07:20:29,388   adding 'moleculekit/vmdviewer.py'
2023-09-29T07:20:29,625   adding 'moleculekit/wrapping.cpython-311-arm-linux-gnueabihf.so'
2023-09-29T07:20:29,639   adding 'moleculekit/writers.py'
2023-09-29T07:20:29,899   adding 'moleculekit/xtc.cpython-311-arm-linux-gnueabihf.so'
2023-09-29T07:20:29,910   adding 'moleculekit/atomselect/__init__.py'
2023-09-29T07:20:29,912   adding 'moleculekit/atomselect/analyze.py'
2023-09-29T07:20:29,914   adding 'moleculekit/atomselect/atomselect.py'
2023-09-29T07:20:29,916   adding 'moleculekit/atomselect/languageparser.py'
2023-09-29T07:20:30,020   adding 'moleculekit/atomselect_utils/atomselect_utils.cpp'
2023-09-29T07:20:30,034   adding 'moleculekit/atomselect_utils/atomselect_utils.pyx'
2023-09-29T07:20:30,127   adding 'moleculekit/bondguesser_utils/bondguesser_utils.cpp'
2023-09-29T07:20:30,138   adding 'moleculekit/bondguesser_utils/bondguesser_utils.pyx'
2023-09-29T07:20:30,237   adding 'moleculekit/distance_utils/distance_utils.cpp'
2023-09-29T07:20:30,249   adding 'moleculekit/distance_utils/distance_utils.pyx'
2023-09-29T07:20:30,251   adding 'moleculekit/interactions/__init__.py'
2023-09-29T07:20:30,532   adding 'moleculekit/interactions/cationpi.cpython-311-arm-linux-gnueabihf.so'
2023-09-29T07:20:30,802   adding 'moleculekit/interactions/hbonds.cpython-311-arm-linux-gnueabihf.so'
2023-09-29T07:20:30,814   adding 'moleculekit/interactions/interactions.py'
2023-09-29T07:20:31,091   adding 'moleculekit/interactions/pipi.cpython-311-arm-linux-gnueabihf.so'
2023-09-29T07:20:31,383   adding 'moleculekit/interactions/sigmahole.cpython-311-arm-linux-gnueabihf.so'
2023-09-29T07:20:31,485   adding 'moleculekit/interactions/cationpi/cationpi.cpp'
2023-09-29T07:20:31,496   adding 'moleculekit/interactions/cationpi/cationpi.pyx'
2023-09-29T07:20:31,586   adding 'moleculekit/interactions/hbonds/hbonds.cpp'
2023-09-29T07:20:31,597   adding 'moleculekit/interactions/hbonds/hbonds.pyx'
2023-09-29T07:20:31,687   adding 'moleculekit/interactions/pipi/pipi.cpp'
2023-09-29T07:20:31,698   adding 'moleculekit/interactions/pipi/pipi.pyx'
2023-09-29T07:20:31,789   adding 'moleculekit/interactions/sigmahole/sigmahole.cpp'
2023-09-29T07:20:31,800   adding 'moleculekit/interactions/sigmahole/sigmahole.pyx'
2023-09-29T07:20:31,886   adding 'moleculekit/occupancy_utils/occupancy_utils.cpp'
2023-09-29T07:20:31,896   adding 'moleculekit/occupancy_utils/occupancy_utils.pyx'
2023-09-29T07:20:31,897   adding 'moleculekit/pdbx/__init__.py'
2023-09-29T07:20:31,901   adding 'moleculekit/pdbx/reader/PdbxContainers.py'
2023-09-29T07:20:31,904   adding 'moleculekit/pdbx/reader/PdbxParser.py'
2023-09-29T07:20:31,906   adding 'moleculekit/pdbx/reader/PdbxReader.py'
2023-09-29T07:20:31,907   adding 'moleculekit/pdbx/reader/__init__.py'
2023-09-29T07:20:31,909   adding 'moleculekit/pdbx/tests/PdbxReadWriteTests.py'
2023-09-29T07:20:31,910   adding 'moleculekit/pdbx/tests/PdbxReaderTests.py'
2023-09-29T07:20:31,912   adding 'moleculekit/pdbx/tests/PdbxWriterTests.py'
2023-09-29T07:20:31,913   adding 'moleculekit/pdbx/tests/__init__.py'
2023-09-29T07:20:31,915   adding 'moleculekit/pdbx/writer/PdbxWriter.py'
2023-09-29T07:20:31,916   adding 'moleculekit/pdbx/writer/__init__.py'
2023-09-29T07:20:31,917   adding 'moleculekit/ply/__init__.py'
2023-09-29T07:20:31,921   adding 'moleculekit/ply/lex.py'
2023-09-29T07:20:31,933   adding 'moleculekit/ply/yacc.py'
2023-09-29T07:20:31,935   adding 'moleculekit/projections/__init__.py'
2023-09-29T07:20:31,937   adding 'moleculekit/projections/metriccoordinate.py'
2023-09-29T07:20:31,941   adding 'moleculekit/projections/metricdihedral.py'
2023-09-29T07:20:31,945   adding 'moleculekit/projections/metricdistance.py'
2023-09-29T07:20:31,947   adding 'moleculekit/projections/metricfluctuation.py'
2023-09-29T07:20:31,948   adding 'moleculekit/projections/metricgyration.py'
2023-09-29T07:20:31,952   adding 'moleculekit/projections/metricplumed2.py'
2023-09-29T07:20:31,954   adding 'moleculekit/projections/metricrmsd.py'
2023-09-29T07:20:31,956   adding 'moleculekit/projections/metricsasa.py'
2023-09-29T07:20:31,958   adding 'moleculekit/projections/metricsecondarystructure.py'
2023-09-29T07:20:31,960   adding 'moleculekit/projections/metricshell.py'
2023-09-29T07:20:31,961   adding 'moleculekit/projections/metricsphericalcoordinate.py'
2023-09-29T07:20:31,963   adding 'moleculekit/projections/metrictmscore.py'
2023-09-29T07:20:31,964   adding 'moleculekit/projections/projection.py'
2023-09-29T07:20:31,966   adding 'moleculekit/projections/util.py'
2023-09-29T07:20:31,968   adding 'moleculekit/share/ALA.cif'
2023-09-29T07:20:31,969   adding 'moleculekit/share/backbone.cif'
2023-09-29T07:20:33,272   adding 'moleculekit/share/opm_sequences.json'
2023-09-29T07:20:33,382   adding 'moleculekit/share/atomselect/atomselect.json'
2023-09-29T07:20:33,387   adding 'moleculekit/share/pdb2pqr/residues/.gitkeep'
2023-09-29T07:20:33,388   adding 'moleculekit/share/pdb2pqr/residues/004.dat'
2023-09-29T07:20:33,389   adding 'moleculekit/share/pdb2pqr/residues/004.xml'
2023-09-29T07:20:33,390   adding 'moleculekit/share/pdb2pqr/residues/03Y.dat'
2023-09-29T07:20:33,392   adding 'moleculekit/share/pdb2pqr/residues/03Y.xml'
2023-09-29T07:20:33,393   adding 'moleculekit/share/pdb2pqr/residues/0A1.dat'
2023-09-29T07:20:33,394   adding 'moleculekit/share/pdb2pqr/residues/0A1.xml'
2023-09-29T07:20:33,395   adding 'moleculekit/share/pdb2pqr/residues/0AF.dat'
2023-09-29T07:20:33,397   adding 'moleculekit/share/pdb2pqr/residues/0AF.xml'
2023-09-29T07:20:33,398   adding 'moleculekit/share/pdb2pqr/residues/0BN.dat'
2023-09-29T07:20:33,399   adding 'moleculekit/share/pdb2pqr/residues/0BN.xml'
2023-09-29T07:20:33,400   adding 'moleculekit/share/pdb2pqr/residues/1MH.dat'
2023-09-29T07:20:33,401   adding 'moleculekit/share/pdb2pqr/residues/1MH.xml'
2023-09-29T07:20:33,402   adding 'moleculekit/share/pdb2pqr/residues/2AS.dat'
2023-09-29T07:20:33,403   adding 'moleculekit/share/pdb2pqr/residues/2AS.xml'
2023-09-29T07:20:33,404   adding 'moleculekit/share/pdb2pqr/residues/2GX.dat'
2023-09-29T07:20:33,405   adding 'moleculekit/share/pdb2pqr/residues/2GX.xml'
2023-09-29T07:20:33,406   adding 'moleculekit/share/pdb2pqr/residues/2ML.dat'
2023-09-29T07:20:33,408   adding 'moleculekit/share/pdb2pqr/residues/2ML.xml'
2023-09-29T07:20:33,409   adding 'moleculekit/share/pdb2pqr/residues/2MR.dat'
2023-09-29T07:20:33,410   adding 'moleculekit/share/pdb2pqr/residues/2MR.xml'
2023-09-29T07:20:33,411   adding 'moleculekit/share/pdb2pqr/residues/4IN.dat'
2023-09-29T07:20:33,412   adding 'moleculekit/share/pdb2pqr/residues/4IN.xml'
2023-09-29T07:20:33,413   adding 'moleculekit/share/pdb2pqr/residues/4PH.dat'
2023-09-29T07:20:33,415   adding 'moleculekit/share/pdb2pqr/residues/4PH.xml'
2023-09-29T07:20:33,416   adding 'moleculekit/share/pdb2pqr/residues/4PQ.dat'
2023-09-29T07:20:33,417   adding 'moleculekit/share/pdb2pqr/residues/4PQ.xml'
2023-09-29T07:20:33,418   adding 'moleculekit/share/pdb2pqr/residues/5JP.dat'
2023-09-29T07:20:33,419   adding 'moleculekit/share/pdb2pqr/residues/5JP.xml'
2023-09-29T07:20:33,420   adding 'moleculekit/share/pdb2pqr/residues/AA4.dat'
2023-09-29T07:20:33,421   adding 'moleculekit/share/pdb2pqr/residues/AA4.xml'
2023-09-29T07:20:33,422   adding 'moleculekit/share/pdb2pqr/residues/ABA.dat'
2023-09-29T07:20:33,424   adding 'moleculekit/share/pdb2pqr/residues/ABA.xml'
2023-09-29T07:20:33,425   adding 'moleculekit/share/pdb2pqr/residues/AHP.dat'
2023-09-29T07:20:33,426   adding 'moleculekit/share/pdb2pqr/residues/AHP.xml'
2023-09-29T07:20:33,427   adding 'moleculekit/share/pdb2pqr/residues/ALC.dat'
2023-09-29T07:20:33,429   adding 'moleculekit/share/pdb2pqr/residues/ALC.xml'
2023-09-29T07:20:33,430   adding 'moleculekit/share/pdb2pqr/residues/ALN.dat'
2023-09-29T07:20:33,431   adding 'moleculekit/share/pdb2pqr/residues/ALN.xml'
2023-09-29T07:20:33,432   adding 'moleculekit/share/pdb2pqr/residues/ALY.dat'
2023-09-29T07:20:33,434   adding 'moleculekit/share/pdb2pqr/residues/ALY.xml'
2023-09-29T07:20:33,435   adding 'moleculekit/share/pdb2pqr/residues/APD.dat'
2023-09-29T07:20:33,436   adding 'moleculekit/share/pdb2pqr/residues/APD.xml'
2023-09-29T07:20:33,437   adding 'moleculekit/share/pdb2pqr/residues/BB8.dat'
2023-09-29T07:20:33,439   adding 'moleculekit/share/pdb2pqr/residues/BB8.xml'
2023-09-29T07:20:33,440   adding 'moleculekit/share/pdb2pqr/residues/BCS.dat'
2023-09-29T07:20:33,441   adding 'moleculekit/share/pdb2pqr/residues/BCS.xml'
2023-09-29T07:20:33,442   adding 'moleculekit/share/pdb2pqr/residues/BTK.dat'
2023-09-29T07:20:33,444   adding 'moleculekit/share/pdb2pqr/residues/BTK.xml'
2023-09-29T07:20:33,445   adding 'moleculekit/share/pdb2pqr/residues/CCS.dat'
2023-09-29T07:20:33,446   adding 'moleculekit/share/pdb2pqr/residues/CCS.xml'
2023-09-29T07:20:33,447   adding 'moleculekit/share/pdb2pqr/residues/CGU.dat'
2023-09-29T07:20:33,448   adding 'moleculekit/share/pdb2pqr/residues/CGU.xml'
2023-09-29T07:20:33,450   adding 'moleculekit/share/pdb2pqr/residues/CSA.dat'
2023-09-29T07:20:33,451   adding 'moleculekit/share/pdb2pqr/residues/CSA.xml'
2023-09-29T07:20:33,452   adding 'moleculekit/share/pdb2pqr/residues/CSO.dat'
2023-09-29T07:20:33,453   adding 'moleculekit/share/pdb2pqr/residues/CSO.xml'
2023-09-29T07:20:33,454   adding 'moleculekit/share/pdb2pqr/residues/CSP.dat'
2023-09-29T07:20:33,456   adding 'moleculekit/share/pdb2pqr/residues/CSP.xml'
2023-09-29T07:20:33,457   adding 'moleculekit/share/pdb2pqr/residues/CSS.dat'
2023-09-29T07:20:33,458   adding 'moleculekit/share/pdb2pqr/residues/CSS.xml'
2023-09-29T07:20:33,459   adding 'moleculekit/share/pdb2pqr/residues/D4P.dat'
2023-09-29T07:20:33,461   adding 'moleculekit/share/pdb2pqr/residues/D4P.xml'
2023-09-29T07:20:33,462   adding 'moleculekit/share/pdb2pqr/residues/DA2.dat'
2023-09-29T07:20:33,463   adding 'moleculekit/share/pdb2pqr/residues/DA2.xml'
2023-09-29T07:20:33,464   adding 'moleculekit/share/pdb2pqr/residues/DAB.dat'
2023-09-29T07:20:33,465   adding 'moleculekit/share/pdb2pqr/residues/DAB.xml'
2023-09-29T07:20:33,466   adding 'moleculekit/share/pdb2pqr/residues/DAH.dat'
2023-09-29T07:20:33,467   adding 'moleculekit/share/pdb2pqr/residues/DAH.xml'
2023-09-29T07:20:33,468   adding 'moleculekit/share/pdb2pqr/residues/DPP.dat'
2023-09-29T07:20:33,470   adding 'moleculekit/share/pdb2pqr/residues/DPP.xml'
2023-09-29T07:20:33,471   adding 'moleculekit/share/pdb2pqr/residues/ESC.dat'
2023-09-29T07:20:33,472   adding 'moleculekit/share/pdb2pqr/residues/ESC.xml'
2023-09-29T07:20:33,473   adding 'moleculekit/share/pdb2pqr/residues/FGL.dat'
2023-09-29T07:20:33,474   adding 'moleculekit/share/pdb2pqr/residues/FGL.xml'
2023-09-29T07:20:33,475   adding 'moleculekit/share/pdb2pqr/residues/GHG.dat'
2023-09-29T07:20:33,476   adding 'moleculekit/share/pdb2pqr/residues/GHG.xml'
2023-09-29T07:20:33,477   adding 'moleculekit/share/pdb2pqr/residues/GME.dat'
2023-09-29T07:20:33,479   adding 'moleculekit/share/pdb2pqr/residues/GME.xml'
2023-09-29T07:20:33,480   adding 'moleculekit/share/pdb2pqr/residues/GNC.dat'
2023-09-29T07:20:33,481   adding 'moleculekit/share/pdb2pqr/residues/GNC.xml'
2023-09-29T07:20:33,482   adding 'moleculekit/share/pdb2pqr/residues/HHK.dat'
2023-09-29T07:20:33,483   adding 'moleculekit/share/pdb2pqr/residues/HHK.xml'
2023-09-29T07:20:33,484   adding 'moleculekit/share/pdb2pqr/residues/HLU.dat'
2023-09-29T07:20:33,485   adding 'moleculekit/share/pdb2pqr/residues/HLU.xml'
2023-09-29T07:20:33,487   adding 'moleculekit/share/pdb2pqr/residues/HLX.dat'
2023-09-29T07:20:33,488   adding 'moleculekit/share/pdb2pqr/residues/HLX.xml'
2023-09-29T07:20:33,489   adding 'moleculekit/share/pdb2pqr/residues/HOX.dat'
2023-09-29T07:20:33,490   adding 'moleculekit/share/pdb2pqr/residues/HOX.xml'
2023-09-29T07:20:33,491   adding 'moleculekit/share/pdb2pqr/residues/HPE.dat'
2023-09-29T07:20:33,492   adding 'moleculekit/share/pdb2pqr/residues/HPE.xml'
2023-09-29T07:20:33,494   adding 'moleculekit/share/pdb2pqr/residues/HQA.dat'
2023-09-29T07:20:33,495   adding 'moleculekit/share/pdb2pqr/residues/HQA.xml'
2023-09-29T07:20:33,496   adding 'moleculekit/share/pdb2pqr/residues/HTR.dat'
2023-09-29T07:20:33,497   adding 'moleculekit/share/pdb2pqr/residues/HTR.xml'
2023-09-29T07:20:33,498   adding 'moleculekit/share/pdb2pqr/residues/HYP.dat'
2023-09-29T07:20:33,500   adding 'moleculekit/share/pdb2pqr/residues/HYP.xml'
2023-09-29T07:20:33,501   adding 'moleculekit/share/pdb2pqr/residues/I2M.dat'
2023-09-29T07:20:33,502   adding 'moleculekit/share/pdb2pqr/residues/I2M.xml'
2023-09-29T07:20:33,503   adding 'moleculekit/share/pdb2pqr/residues/IGL.dat'
2023-09-29T07:20:33,504   adding 'moleculekit/share/pdb2pqr/residues/IGL.xml'
2023-09-29T07:20:33,505   adding 'moleculekit/share/pdb2pqr/residues/IIL.dat'
2023-09-29T07:20:33,507   adding 'moleculekit/share/pdb2pqr/residues/IIL.xml'
2023-09-29T07:20:33,508   adding 'moleculekit/share/pdb2pqr/residues/IML.dat'
2023-09-29T07:20:33,509   adding 'moleculekit/share/pdb2pqr/residues/IML.xml'
2023-09-29T07:20:33,510   adding 'moleculekit/share/pdb2pqr/residues/KYN.dat'
2023-09-29T07:20:33,512   adding 'moleculekit/share/pdb2pqr/residues/KYN.xml'
2023-09-29T07:20:33,513   adding 'moleculekit/share/pdb2pqr/residues/LME.dat'
2023-09-29T07:20:33,515   adding 'moleculekit/share/pdb2pqr/residues/LME.xml'
2023-09-29T07:20:33,516   adding 'moleculekit/share/pdb2pqr/residues/LMQ.dat'
2023-09-29T07:20:33,517   adding 'moleculekit/share/pdb2pqr/residues/LMQ.xml'
2023-09-29T07:20:33,518   adding 'moleculekit/share/pdb2pqr/residues/LYZ.dat'
2023-09-29T07:20:33,519   adding 'moleculekit/share/pdb2pqr/residues/LYZ.xml'
2023-09-29T07:20:33,521   adding 'moleculekit/share/pdb2pqr/residues/M3L.dat'
2023-09-29T07:20:33,522   adding 'moleculekit/share/pdb2pqr/residues/M3L.xml'
2023-09-29T07:20:33,523   adding 'moleculekit/share/pdb2pqr/residues/ME0.dat'
2023-09-29T07:20:33,524   adding 'moleculekit/share/pdb2pqr/residues/ME0.xml'
2023-09-29T07:20:33,526   adding 'moleculekit/share/pdb2pqr/residues/MEA.dat'
2023-09-29T07:20:33,527   adding 'moleculekit/share/pdb2pqr/residues/MEA.xml'
2023-09-29T07:20:33,528   adding 'moleculekit/share/pdb2pqr/residues/MEN.dat'
2023-09-29T07:20:33,529   adding 'moleculekit/share/pdb2pqr/residues/MEN.xml'
2023-09-29T07:20:33,530   adding 'moleculekit/share/pdb2pqr/residues/MEQ.dat'
2023-09-29T07:20:33,531   adding 'moleculekit/share/pdb2pqr/residues/MEQ.xml'
2023-09-29T07:20:33,532   adding 'moleculekit/share/pdb2pqr/residues/MLE.dat'
2023-09-29T07:20:33,533   adding 'moleculekit/share/pdb2pqr/residues/MLE.xml'
2023-09-29T07:20:33,535   adding 'moleculekit/share/pdb2pqr/residues/MLY.dat'
2023-09-29T07:20:33,536   adding 'moleculekit/share/pdb2pqr/residues/MLY.xml'
2023-09-29T07:20:33,537   adding 'moleculekit/share/pdb2pqr/residues/MLZ.dat'
2023-09-29T07:20:33,538   adding 'moleculekit/share/pdb2pqr/residues/MLZ.xml'
2023-09-29T07:20:33,539   adding 'moleculekit/share/pdb2pqr/residues/MME.dat'
2023-09-29T07:20:33,541   adding 'moleculekit/share/pdb2pqr/residues/MME.xml'
2023-09-29T07:20:33,542   adding 'moleculekit/share/pdb2pqr/residues/MMO.dat'
2023-09-29T07:20:33,543   adding 'moleculekit/share/pdb2pqr/residues/MMO.xml'
2023-09-29T07:20:33,544   adding 'moleculekit/share/pdb2pqr/residues/MVA.dat'
2023-09-29T07:20:33,545   adding 'moleculekit/share/pdb2pqr/residues/MVA.xml'
2023-09-29T07:20:33,548   adding 'moleculekit/share/pdb2pqr/residues/NAL.dat'
2023-09-29T07:20:33,549   adding 'moleculekit/share/pdb2pqr/residues/NAL.xml'
2023-09-29T07:20:33,551   adding 'moleculekit/share/pdb2pqr/residues/NCY.dat'
2023-09-29T07:20:33,552   adding 'moleculekit/share/pdb2pqr/residues/NCY.xml'
2023-09-29T07:20:33,553   adding 'moleculekit/share/pdb2pqr/residues/NLE.dat'
2023-09-29T07:20:33,554   adding 'moleculekit/share/pdb2pqr/residues/NLE.xml'
2023-09-29T07:20:33,555   adding 'moleculekit/share/pdb2pqr/residues/NVA.dat'
2023-09-29T07:20:33,556   adding 'moleculekit/share/pdb2pqr/residues/NVA.xml'
2023-09-29T07:20:33,558   adding 'moleculekit/share/pdb2pqr/residues/NZC.dat'
2023-09-29T07:20:33,559   adding 'moleculekit/share/pdb2pqr/residues/NZC.xml'
2023-09-29T07:20:33,560   adding 'moleculekit/share/pdb2pqr/residues/OCY.dat'
2023-09-29T07:20:33,561   adding 'moleculekit/share/pdb2pqr/residues/OCY.xml'
2023-09-29T07:20:33,562   adding 'moleculekit/share/pdb2pqr/residues/OMX.dat'
2023-09-29T07:20:33,563   adding 'moleculekit/share/pdb2pqr/residues/OMX.xml'
2023-09-29T07:20:33,565   adding 'moleculekit/share/pdb2pqr/residues/ONL.dat'
2023-09-29T07:20:33,566   adding 'moleculekit/share/pdb2pqr/residues/ONL.xml'
2023-09-29T07:20:33,567   adding 'moleculekit/share/pdb2pqr/residues/ORM.dat'
2023-09-29T07:20:33,568   adding 'moleculekit/share/pdb2pqr/residues/ORM.xml'
2023-09-29T07:20:33,570   adding 'moleculekit/share/pdb2pqr/residues/P1L.dat'
2023-09-29T07:20:33,571   adding 'moleculekit/share/pdb2pqr/residues/P1L.xml'
2023-09-29T07:20:33,572   adding 'moleculekit/share/pdb2pqr/residues/PCA.dat'
2023-09-29T07:20:33,574   adding 'moleculekit/share/pdb2pqr/residues/PCA.xml'
2023-09-29T07:20:33,575   adding 'moleculekit/share/pdb2pqr/residues/PRK.dat'
2023-09-29T07:20:33,576   adding 'moleculekit/share/pdb2pqr/residues/PRK.xml'
2023-09-29T07:20:33,578   adding 'moleculekit/share/pdb2pqr/residues/PTR.dat'
2023-09-29T07:20:33,579   adding 'moleculekit/share/pdb2pqr/residues/PTR.xml'
2023-09-29T07:20:33,580   adding 'moleculekit/share/pdb2pqr/residues/SEP.dat'
2023-09-29T07:20:33,581   adding 'moleculekit/share/pdb2pqr/residues/SEP.xml'
2023-09-29T07:20:33,582   adding 'moleculekit/share/pdb2pqr/residues/TPO.dat'
2023-09-29T07:20:33,584   adding 'moleculekit/share/pdb2pqr/residues/TPO.xml'
2023-09-29T07:20:33,585   adding 'moleculekit/share/pdb2pqr/residues/TRO.dat'
2023-09-29T07:20:33,587   adding 'moleculekit/share/pdb2pqr/residues/TRO.xml'
2023-09-29T07:20:33,588   adding 'moleculekit/share/pdb2pqr/residues/TY2.dat'
2023-09-29T07:20:33,590   adding 'moleculekit/share/pdb2pqr/residues/TY2.xml'
2023-09-29T07:20:33,591   adding 'moleculekit/share/pdb2pqr/residues/TYQ.dat'
2023-09-29T07:20:33,592   adding 'moleculekit/share/pdb2pqr/residues/TYQ.xml'
2023-09-29T07:20:33,593   adding 'moleculekit/share/pdb2pqr/residues/YCM.dat'
2023-09-29T07:20:33,594   adding 'moleculekit/share/pdb2pqr/residues/YCM.xml'
2023-09-29T07:20:33,595   adding 'moleculekit/share/pdb2pqr/residues/YNM.dat'
2023-09-29T07:20:33,596   adding 'moleculekit/share/pdb2pqr/residues/YNM.xml'
2023-09-29T07:20:33,598   adding 'moleculekit/smallmol/__init__.py'
2023-09-29T07:20:33,603   adding 'moleculekit/smallmol/smallmol.py'
2023-09-29T07:20:33,605   adding 'moleculekit/smallmol/smallmollib.py'
2023-09-29T07:20:33,607   adding 'moleculekit/smallmol/test_smallmol.py'
2023-09-29T07:20:33,608   adding 'moleculekit/smallmol/test_smallmollib.py'
2023-09-29T07:20:33,610   adding 'moleculekit/smallmol/util.py'
2023-09-29T07:20:33,612   adding 'moleculekit/smallmol/tools/__init__.py'
2023-09-29T07:20:33,614   adding 'moleculekit/smallmol/tools/clustering.py'
2023-09-29T07:20:33,615   adding 'moleculekit/smallmol/tools/restrainedembed.py'
2023-09-29T07:20:33,617   adding 'moleculekit/smallmol/tools/test_tools.py'
2023-09-29T07:20:33,709   adding 'moleculekit/tmalign/tmalign_util.cpp'
2023-09-29T07:20:33,719   adding 'moleculekit/tmalign/tmalign_util.pyx'
2023-09-29T07:20:33,720   adding 'moleculekit/tmalign/tmalignlib.pxd'
2023-09-29T07:20:33,722   adding 'moleculekit/tmalign/include/TMAlign.h'
2023-09-29T07:20:33,740   adding 'moleculekit/tmalign/src/TMAlign.cpp'
2023-09-29T07:20:33,744   adding 'moleculekit/tools/__init__.py'
2023-09-29T07:20:33,746   adding 'moleculekit/tools/atomtyper.py'
2023-09-29T07:20:33,749   adding 'moleculekit/tools/autosegment.py'
2023-09-29T07:20:33,751   adding 'moleculekit/tools/crystalpacking.py'
2023-09-29T07:20:33,754   adding 'moleculekit/tools/detect.py'
2023-09-29T07:20:33,755   adding 'moleculekit/tools/docking.py'
2023-09-29T07:20:33,757   adding 'moleculekit/tools/graphalignment.py'
2023-09-29T07:20:33,759   adding 'moleculekit/tools/hhblitsprofile.py'
2023-09-29T07:20:33,760   adding 'moleculekit/tools/moleculechecks.py'
2023-09-29T07:20:33,766   adding 'moleculekit/tools/preparation.py'
2023-09-29T07:20:33,769   adding 'moleculekit/tools/preparation_customres.py'
2023-09-29T07:20:33,771   adding 'moleculekit/tools/sequencestructuralalignment.py'
2023-09-29T07:20:33,774   adding 'moleculekit/tools/voxeldescriptors.py'
2023-09-29T07:20:33,776   adding 'moleculekit/tools/obabel_tools/__init__.py'
2023-09-29T07:20:33,777   adding 'moleculekit/tools/obabel_tools/obabel_cli.py'
2023-09-29T07:20:33,864   adding 'moleculekit/wrapping/wrapping.cpp'
2023-09-29T07:20:33,875   adding 'moleculekit/wrapping/wrapping.pyx'
2023-09-29T07:20:33,963   adding 'moleculekit/xtc_utils/xtc.cpp'
2023-09-29T07:20:33,974   adding 'moleculekit/xtc_utils/xtc.pyx'
2023-09-29T07:20:33,975   adding 'moleculekit/xtc_utils/xtclib.pxd'
2023-09-29T07:20:33,978   adding 'moleculekit/xtc_utils/include/xdrfile.h'
2023-09-29T07:20:33,979   adding 'moleculekit/xtc_utils/include/xdrfile_xtc.h'
2023-09-29T07:20:33,981   adding 'moleculekit/xtc_utils/include/xtc.h'
2023-09-29T07:20:33,988   adding 'moleculekit/xtc_utils/src/xdrfile.cpp'
2023-09-29T07:20:33,989   adding 'moleculekit/xtc_utils/src/xdrfile_xtc.cpp'
2023-09-29T07:20:33,991   adding 'moleculekit/xtc_utils/src/xtc.cpp'
2023-09-29T07:20:33,993   adding 'moleculekit-1.7.13.dist-info/LICENSE'
2023-09-29T07:20:33,995   adding 'moleculekit-1.7.13.dist-info/METADATA'
2023-09-29T07:20:33,996   adding 'moleculekit-1.7.13.dist-info/WHEEL'
2023-09-29T07:20:33,997   adding 'moleculekit-1.7.13.dist-info/top_level.txt'
2023-09-29T07:20:34,002   adding 'moleculekit-1.7.13.dist-info/RECORD'
2023-09-29T07:20:34,150   removing build/bdist.linux-armv7l/wheel
2023-09-29T07:20:34,435   Building wheel for moleculekit (pyproject.toml): finished with status 'done'
2023-09-29T07:20:34,718   Created wheel for moleculekit: filename=moleculekit-1.7.13-cp311-cp311-linux_armv7l.whl size=12837813 sha256=53efb490efbcd7eb7de333aeea128f7a6a517c407f1b8d3a561cf3d8f9f8b631
2023-09-29T07:20:34,720   Stored in directory: /tmp/pip-ephem-wheel-cache-_4yi_rox/wheels/14/1f/cd/efb17475978e52f35dc51bc797c0ea52304f8ad8d8bfe17519
2023-09-29T07:20:34,743 Successfully built moleculekit
2023-09-29T07:20:35,044 Removed build tracker: '/tmp/pip-build-tracker-vw3oeavo'