2023-09-29T23:59:04,541 Created temporary directory: /tmp/pip-build-tracker-8t_fdfg0
2023-09-29T23:59:04,543 Initialized build tracking at /tmp/pip-build-tracker-8t_fdfg0
2023-09-29T23:59:04,544 Created build tracker: /tmp/pip-build-tracker-8t_fdfg0
2023-09-29T23:59:04,545 Entered build tracker: /tmp/pip-build-tracker-8t_fdfg0
2023-09-29T23:59:04,546 Created temporary directory: /tmp/pip-wheel-gtlvochk
2023-09-29T23:59:04,550 Created temporary directory: /tmp/pip-ephem-wheel-cache-npug3kks
2023-09-29T23:59:04,574 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-29T23:59:04,578 2 location(s) to search for versions of vermouth:
2023-09-29T23:59:04,578 * https://pypi.org/simple/vermouth/
2023-09-29T23:59:04,578 * https://www.piwheels.org/simple/vermouth/
2023-09-29T23:59:04,579 Fetching project page and analyzing links: https://pypi.org/simple/vermouth/
2023-09-29T23:59:04,579 Getting page https://pypi.org/simple/vermouth/
2023-09-29T23:59:04,581 Found index url https://pypi.org/simple/
2023-09-29T23:59:04,796 Fetched page https://pypi.org/simple/vermouth/ as application/vnd.pypi.simple.v1+json
2023-09-29T23:59:04,803   Found link https://files.pythonhosted.org/packages/c6/b1/274b76764e2ebe0b190708befe8a588d5b645f096609f68723139c80fdee/vermouth-0.1.0.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.1.0
2023-09-29T23:59:04,804   Found link https://files.pythonhosted.org/packages/ee/d9/cc8ed35bf50924fa9bf4d450c620f6f0f45254b00b30c2fe1a7f76b00368/vermouth-0.2.0.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.2.0
2023-09-29T23:59:04,805   Found link https://files.pythonhosted.org/packages/c7/6b/bf90515318a6a1c4e2994db43469e52e638d16400068dfcb7d478e9b7c1a/vermouth-0.3.0.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.3.0
2023-09-29T23:59:04,805   Found link https://files.pythonhosted.org/packages/b2/d5/07402db0608b5e2bdfbf3f8858ccfd2f454f382f50e4a6940b763426cbea/vermouth-0.3.1.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.3.1
2023-09-29T23:59:04,806   Found link https://files.pythonhosted.org/packages/bf/6e/b4e991b3fe595aca6a31cc0449c66b240f50edbf12ebfe80f0d0e592cd5e/vermouth-0.4.0.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.4.0
2023-09-29T23:59:04,806   Found link https://files.pythonhosted.org/packages/2c/72/107e8be40ef06f07a809105debbfb1278aceaee8c363189b9c09fe44f8a2/vermouth-0.4.1.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.4.1
2023-09-29T23:59:04,807   Found link https://files.pythonhosted.org/packages/d2/86/6cc920072226d0a6e5c0e0a28f85414722b023c66c3cccaaf3492ded2cba/vermouth-0.5.0.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.5.0
2023-09-29T23:59:04,808   Skipping link: No binaries permitted for vermouth: https://files.pythonhosted.org/packages/ee/ff/589eae88b25a30d0b086231b459f2927ede30c9ef57e92b84a4d479775f2/vermouth-0.6.0-py2.py3-none-any.whl (from https://pypi.org/simple/vermouth/)
2023-09-29T23:59:04,808   Found link https://files.pythonhosted.org/packages/de/df/6ec1631c808589b3eb5dfbb8e22df2803fde0750c30e6305148f14d72256/vermouth-0.6.0.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.6.0
2023-09-29T23:59:04,809   Skipping link: No binaries permitted for vermouth: https://files.pythonhosted.org/packages/de/1f/a29254c72edc7bc749c16f3bf621baa85c6883567469ebcc068b6771abb4/vermouth-0.6.1.dev1-py2.py3-none-any.whl (from https://pypi.org/simple/vermouth/)
2023-09-29T23:59:04,810   Found link https://files.pythonhosted.org/packages/f5/75/24a94d58fdd58770f2df5325d29034dbd0a072a0bd99905507a297dc3796/vermouth-0.6.1.dev1.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.6.1.dev1
2023-09-29T23:59:04,811   Skipping link: No binaries permitted for vermouth: https://files.pythonhosted.org/packages/b8/87/07db5eba7bf97abf229dbf76ff759a877057bf94cffff0ded5909422d14a/vermouth-0.7.0-py2.py3-none-any.whl (from https://pypi.org/simple/vermouth/)
2023-09-29T23:59:04,811   Found link https://files.pythonhosted.org/packages/94/1f/e6e57cdc03b6afb830671707bffbfccefd383b3efc9dbe086c1d9037c34d/vermouth-0.7.0.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.7.0
2023-09-29T23:59:04,812   Skipping link: No binaries permitted for vermouth: https://files.pythonhosted.org/packages/18/d3/2998a0d56963a85358f7fe385adb3eb9d660c1ce771057008afd5cfd6901/vermouth-0.7.1-py2.py3-none-any.whl (from https://pypi.org/simple/vermouth/)
2023-09-29T23:59:04,813   Found link https://files.pythonhosted.org/packages/43/0b/d6cd081c035a321c1149cd8625fad98d969d6413327bbde731f4d30c5e4f/vermouth-0.7.1.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.7.1
2023-09-29T23:59:04,813   Skipping link: No binaries permitted for vermouth: https://files.pythonhosted.org/packages/b2/3a/cb877fe0c178bce0e16ddda0c34fd57902248b07938e3cb72bc1c78bc0d1/vermouth-0.7.2-py2.py3-none-any.whl (from https://pypi.org/simple/vermouth/)
2023-09-29T23:59:04,814   Found link https://files.pythonhosted.org/packages/56/a1/1e5a5d54a4d1aed5d50645e5adc4ad026636c1e837d56adce10a54463ad6/vermouth-0.7.2.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.7.2
2023-09-29T23:59:04,814   Skipping link: No binaries permitted for vermouth: https://files.pythonhosted.org/packages/b2/20/f41a35c1b011d730614adab6923c713a58b7731b28b6488e8190a009aec2/vermouth-0.7.3-py2.py3-none-any.whl (from https://pypi.org/simple/vermouth/)
2023-09-29T23:59:04,815   Found link https://files.pythonhosted.org/packages/7d/78/12e0752ceab663c708253421692fbc1ee3b1184e1918e2fbc9b06f4f9097/vermouth-0.7.3.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.7.3
2023-09-29T23:59:04,815   Skipping link: No binaries permitted for vermouth: https://files.pythonhosted.org/packages/52/34/e7b82dc063e327fc8f47ab01d2b27363ebd3778e8f45d90ec8ad38486480/vermouth-0.8.1-py2.py3-none-any.whl (from https://pypi.org/simple/vermouth/)
2023-09-29T23:59:04,816   Found link https://files.pythonhosted.org/packages/1a/49/4e20bde1dbaab255a469c7944c1e6a767e7449e1dd5b20e3f2524083d6eb/vermouth-0.8.1.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.8.1
2023-09-29T23:59:04,817   Skipping link: No binaries permitted for vermouth: https://files.pythonhosted.org/packages/7e/a1/549f337abec9f3a02d249895a849d3d500008e1d39beb38582c97654e949/vermouth-0.9.0-py2.py3-none-any.whl (from https://pypi.org/simple/vermouth/)
2023-09-29T23:59:04,817   Found link https://files.pythonhosted.org/packages/e2/aa/77a78de364e05a2096416338e09f0e5c371e90c3d434d8fa5ba4982e3175/vermouth-0.9.0.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.9.0
2023-09-29T23:59:04,818   Skipping link: No binaries permitted for vermouth: https://files.pythonhosted.org/packages/57/ac/ab6dc7c67e51a2a64dd830a992d3e8e23e785532a87c4e19527cd548bb97/vermouth-0.9.1-py2.py3-none-any.whl (from https://pypi.org/simple/vermouth/)
2023-09-29T23:59:04,818   Found link https://files.pythonhosted.org/packages/59/0d/adbfe0a5c7343fe5a7341c4bfa08216edc273c379e2ce8751a8ff8e223a7/vermouth-0.9.1.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.9.1
2023-09-29T23:59:04,819   Skipping link: No binaries permitted for vermouth: https://files.pythonhosted.org/packages/49/75/4ec22d12b99a6be70538a808b22498875fe370f7a80155adc7c3df890c80/vermouth-0.9.3-py2.py3-none-any.whl (from https://pypi.org/simple/vermouth/)
2023-09-29T23:59:04,820   Found link https://files.pythonhosted.org/packages/84/fb/8b0409d31d928a77c9ab5f7e28cdc51ae3e749a389e5f523d02d7424a67f/vermouth-0.9.3.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.9.3
2023-09-29T23:59:04,821   Skipping link: No binaries permitted for vermouth: https://files.pythonhosted.org/packages/c5/b8/a35f4f3c9002c38cc912089d3309daae1c3b60021286badbb606362b4d4e/vermouth-0.9.5-py2.py3-none-any.whl (from https://pypi.org/simple/vermouth/)
2023-09-29T23:59:04,821   Found link https://files.pythonhosted.org/packages/0a/9b/b4318b5b2e2ec08885ac6eaf41e0fab500d3eb77341c1556e283b7bda837/vermouth-0.9.5.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.9.5
2023-09-29T23:59:04,822   Skipping link: No binaries permitted for vermouth: https://files.pythonhosted.org/packages/e9/50/d3f5301305901af444be9e6d18fdde39bb54794104eb77f75c8a1ab39808/vermouth-0.9.6-py2.py3-none-any.whl (from https://pypi.org/simple/vermouth/)
2023-09-29T23:59:04,823   Found link https://files.pythonhosted.org/packages/f2/1e/703491e3de4fd3c249d1df055007c42352ebf22a0cefe6c666f99c880576/vermouth-0.9.6.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.9.6
2023-09-29T23:59:04,824 Fetching project page and analyzing links: https://www.piwheels.org/simple/vermouth/
2023-09-29T23:59:04,824 Getting page https://www.piwheels.org/simple/vermouth/
2023-09-29T23:59:04,825 Found index url https://www.piwheels.org/simple/
2023-09-29T23:59:04,997 Fetched page https://www.piwheels.org/simple/vermouth/ as text/html
2023-09-29T23:59:05,002   Skipping link: No binaries permitted for vermouth: https://www.piwheels.org/simple/vermouth/vermouth-0.9.3-py2.py3-none-any.whl#sha256=28c579c2c0792f6e9e78f0ab16f165a1c83a2d5e1e4db5b46b528a9f13127af7 (from https://www.piwheels.org/simple/vermouth/)
2023-09-29T23:59:05,003   Skipping link: No binaries permitted for vermouth: https://www.piwheels.org/simple/vermouth/vermouth-0.9.1-py2.py3-none-any.whl#sha256=d081aae0aa5c3bf9d4d2af5221874610db58acfca8080f5cb45f3e76d4624bd8 (from https://www.piwheels.org/simple/vermouth/)
2023-09-29T23:59:05,003   Skipping link: No binaries permitted for vermouth: https://www.piwheels.org/simple/vermouth/vermouth-0.9.0-py2.py3-none-any.whl#sha256=af7e389a682ab361277dba8792edfca3ef6ca68d5884be63696c233885c5d31c (from https://www.piwheels.org/simple/vermouth/)
2023-09-29T23:59:05,004   Skipping link: No binaries permitted for vermouth: https://www.piwheels.org/simple/vermouth/vermouth-0.8.1-py2.py3-none-any.whl#sha256=f0c9d27ed8796568f7aa9dd2294d10d07fa0f27764ebc2d85ce2715ec2c6a5e5 (from https://www.piwheels.org/simple/vermouth/)
2023-09-29T23:59:05,004   Skipping link: No binaries permitted for vermouth: https://www.piwheels.org/simple/vermouth/vermouth-0.7.3-py2.py3-none-any.whl#sha256=a151dce5369142ce6d19a3988e0a1746288f8f2fae07ba59c5e1547df88ad1e3 (from https://www.piwheels.org/simple/vermouth/)
2023-09-29T23:59:05,005   Skipping link: No binaries permitted for vermouth: https://www.piwheels.org/simple/vermouth/vermouth-0.7.2-py2.py3-none-any.whl#sha256=229f973ded59ef7883ba4f6fbfa96540cdf40b1b961b12efdbe7d5cb81fac6a1 (from https://www.piwheels.org/simple/vermouth/)
2023-09-29T23:59:05,005   Skipping link: No binaries permitted for vermouth: https://www.piwheels.org/simple/vermouth/vermouth-0.7.1-py2.py3-none-any.whl#sha256=fc70883831d576793246091cafc7b008f187bc4faf6a8e560307ab7481e832f2 (from https://www.piwheels.org/simple/vermouth/)
2023-09-29T23:59:05,006   Skipping link: No binaries permitted for vermouth: https://www.piwheels.org/simple/vermouth/vermouth-0.7.0-py2.py3-none-any.whl#sha256=5fca42314e68189e5e41f8e4b1722a1b93e3522c211a4504fa1e329991804768 (from https://www.piwheels.org/simple/vermouth/)
2023-09-29T23:59:05,006   Skipping link: No binaries permitted for vermouth: https://www.piwheels.org/simple/vermouth/vermouth-0.6.1.dev1-py2.py3-none-any.whl#sha256=40b89874779133125b2ceda6a869dfaee2f00ebbeb4eab86903eb35cf0f51102 (from https://www.piwheels.org/simple/vermouth/)
2023-09-29T23:59:05,007   Skipping link: No binaries permitted for vermouth: https://www.piwheels.org/simple/vermouth/vermouth-0.6.0-py2.py3-none-any.whl#sha256=eacf3828c494728c7a206f78e8b3845eed24ca2f25b522c618260811f03231fe (from https://www.piwheels.org/simple/vermouth/)
2023-09-29T23:59:05,008   Skipping link: No binaries permitted for vermouth: https://www.piwheels.org/simple/vermouth/vermouth-0.5.0-py2.py3-none-any.whl#sha256=d2dcb086df80653b9602029af7363d8ba15a3660a9eed6f9d5c62f3156f231d2 (from https://www.piwheels.org/simple/vermouth/)
2023-09-29T23:59:05,008   Skipping link: No binaries permitted for vermouth: https://www.piwheels.org/simple/vermouth/vermouth-0.4.1-py2.py3-none-any.whl#sha256=7b29e1249b460cbf99396d25d6b7898d394a4f354f06f4574240f9226aaf70de (from https://www.piwheels.org/simple/vermouth/)
2023-09-29T23:59:05,009   Skipping link: No binaries permitted for vermouth: https://www.piwheels.org/simple/vermouth/vermouth-0.4.0-py2.py3-none-any.whl#sha256=1e8e41f2ade8de1b613de4a5fba5a29828bbd23b449c1c6fc503ab0dd52aa61f (from https://www.piwheels.org/simple/vermouth/)
2023-09-29T23:59:05,010   Skipping link: No binaries permitted for vermouth: https://www.piwheels.org/simple/vermouth/vermouth-0.3.1-py2.py3-none-any.whl#sha256=3431b025e519118e06c5ccb19b7a28cbf5f40fc6029496521569f2647a0fab3a (from https://www.piwheels.org/simple/vermouth/)
2023-09-29T23:59:05,011   Skipping link: No binaries permitted for vermouth: https://www.piwheels.org/simple/vermouth/vermouth-0.3.0-py2.py3-none-any.whl#sha256=164322a4f376c6a503756677793912d937dfb6330f3973c9dc8fdb89eafa44e3 (from https://www.piwheels.org/simple/vermouth/)
2023-09-29T23:59:05,011   Skipping link: No binaries permitted for vermouth: https://www.piwheels.org/simple/vermouth/vermouth-0.2.0-py2.py3-none-any.whl#sha256=bc59509223e3450150b291f42032d3cea874b0544820fe778507ccca510f03b5 (from https://www.piwheels.org/simple/vermouth/)
2023-09-29T23:59:05,012   Skipping link: No binaries permitted for vermouth: https://www.piwheels.org/simple/vermouth/vermouth-0.1.0-py2.py3-none-any.whl#sha256=28068403a9546c028aca0d749c0401d00d6aa1ec66f1cf8bb91f8e293294cc2e (from https://www.piwheels.org/simple/vermouth/)
2023-09-29T23:59:05,012 Skipping link: not a file: https://www.piwheels.org/simple/vermouth/
2023-09-29T23:59:05,013 Skipping link: not a file: https://pypi.org/simple/vermouth/
2023-09-29T23:59:05,034 Given no hashes to check 1 links for project 'vermouth': discarding no candidates
2023-09-29T23:59:05,052 Collecting vermouth==0.9.5
2023-09-29T23:59:05,055   Created temporary directory: /tmp/pip-unpack-us2ohnkz
2023-09-29T23:59:05,274   Downloading vermouth-0.9.5.tar.gz (2.5 MB)
2023-09-29T23:59:07,172   Added vermouth==0.9.5 from https://files.pythonhosted.org/packages/0a/9b/b4318b5b2e2ec08885ac6eaf41e0fab500d3eb77341c1556e283b7bda837/vermouth-0.9.5.tar.gz to build tracker '/tmp/pip-build-tracker-8t_fdfg0'
2023-09-29T23:59:07,177   Created temporary directory: /tmp/pip-build-env-gwoywrnl
2023-09-29T23:59:07,181   Installing build dependencies: started
2023-09-29T23:59:07,183   Running command pip subprocess to install build dependencies
2023-09-29T23:59:08,358   Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2023-09-29T23:59:08,888   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-29T23:59:09,393   Collecting wheel
2023-09-29T23:59:09,410     Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB)
2023-09-29T23:59:10,733   Collecting setuptools>=30.3.0
2023-09-29T23:59:10,801     Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.2.2-py3-none-any.whl (807 kB)
2023-09-29T23:59:11,023   Collecting pbr
2023-09-29T23:59:11,041     Using cached https://www.piwheels.org/simple/pbr/pbr-5.11.1-py2.py3-none-any.whl (112 kB)
2023-09-29T23:59:13,637   Installing collected packages: wheel, setuptools, pbr
2023-09-29T23:59:13,868     Creating /tmp/pip-build-env-gwoywrnl/overlay/local/bin
2023-09-29T23:59:13,870     changing mode of /tmp/pip-build-env-gwoywrnl/overlay/local/bin/wheel to 755
2023-09-29T23:59:16,506     changing mode of /tmp/pip-build-env-gwoywrnl/overlay/local/bin/pbr to 755
2023-09-29T23:59:16,530   Successfully installed pbr-5.11.1 setuptools-68.2.2 wheel-0.41.2
2023-09-29T23:59:17,121   Installing build dependencies: finished with status 'done'
2023-09-29T23:59:17,134   Getting requirements to build wheel: started
2023-09-29T23:59:17,136   Running command Getting requirements to build wheel
2023-09-29T23:59:17,644   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-09-29T23:59:17,645   !!

2023-09-29T23:59:17,646           ********************************************************************************
2023-09-29T23:59:17,647           Usage of dash-separated 'description-content-type' will not be supported in future
2023-09-29T23:59:17,648           versions. Please use the underscore name 'description_content_type' instead.

2023-09-29T23:59:17,649           This deprecation is overdue, please update your project and remove deprecated
2023-09-29T23:59:17,650           calls to avoid build errors in the future.

2023-09-29T23:59:17,651           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-09-29T23:59:17,651           ********************************************************************************

2023-09-29T23:59:17,652   !!
2023-09-29T23:59:17,653     opt = self.warn_dash_deprecation(opt, section)
2023-09-29T23:59:17,657   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-09-29T23:59:17,658   !!

2023-09-29T23:59:17,659           ********************************************************************************
2023-09-29T23:59:17,660           Usage of dash-separated 'setup-requires' will not be supported in future
2023-09-29T23:59:17,660           versions. Please use the underscore name 'setup_requires' instead.

2023-09-29T23:59:17,661           This deprecation is overdue, please update your project and remove deprecated
2023-09-29T23:59:17,662           calls to avoid build errors in the future.

2023-09-29T23:59:17,663           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-09-29T23:59:17,663           ********************************************************************************

2023-09-29T23:59:17,664   !!
2023-09-29T23:59:17,664     opt = self.warn_dash_deprecation(opt, section)
2023-09-29T23:59:17,665   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-09-29T23:59:17,665   !!

2023-09-29T23:59:17,666           ********************************************************************************
2023-09-29T23:59:17,667           Usage of dash-separated 'install-requires' will not be supported in future
2023-09-29T23:59:17,667           versions. Please use the underscore name 'install_requires' instead.

2023-09-29T23:59:17,668           This deprecation is overdue, please update your project and remove deprecated
2023-09-29T23:59:17,669           calls to avoid build errors in the future.

2023-09-29T23:59:17,670           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-09-29T23:59:17,671           ********************************************************************************

2023-09-29T23:59:17,672   !!
2023-09-29T23:59:17,672     opt = self.warn_dash_deprecation(opt, section)
2023-09-29T23:59:17,673   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-09-29T23:59:17,673   !!

2023-09-29T23:59:17,674           ********************************************************************************
2023-09-29T23:59:17,675           Usage of dash-separated 'zip-safe' will not be supported in future
2023-09-29T23:59:17,675           versions. Please use the underscore name 'zip_safe' instead.

2023-09-29T23:59:17,676           This deprecation is overdue, please update your project and remove deprecated
2023-09-29T23:59:17,677           calls to avoid build errors in the future.

2023-09-29T23:59:17,678           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-09-29T23:59:17,678           ********************************************************************************

2023-09-29T23:59:17,679   !!
2023-09-29T23:59:17,680     opt = self.warn_dash_deprecation(opt, section)
2023-09-29T23:59:17,762   Getting requirements to build wheel: finished with status 'done'
2023-09-29T23:59:17,786   Created temporary directory: /tmp/pip-modern-metadata-jd81yyy8
2023-09-29T23:59:17,789   Preparing metadata (pyproject.toml): started
2023-09-29T23:59:17,790   Running command Preparing metadata (pyproject.toml)
2023-09-29T23:59:18,491   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/command/develop.py:40: EasyInstallDeprecationWarning: easy_install command is deprecated.
2023-09-29T23:59:18,491   !!

2023-09-29T23:59:18,492           ********************************************************************************
2023-09-29T23:59:18,493           Please avoid running ``setup.py`` and ``easy_install``.
2023-09-29T23:59:18,493           Instead, use pypa/build, pypa/installer or other
2023-09-29T23:59:18,494           standards-based tools.

2023-09-29T23:59:18,495           See https://github.com/pypa/setuptools/issues/917 for details.
2023-09-29T23:59:18,495           ********************************************************************************

2023-09-29T23:59:18,496   !!
2023-09-29T23:59:18,497     easy_install.initialize_options(self)
2023-09-29T23:59:18,497   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2023-09-29T23:59:18,497   !!

2023-09-29T23:59:18,498           ********************************************************************************
2023-09-29T23:59:18,499           Please avoid running ``setup.py`` directly.
2023-09-29T23:59:18,499           Instead, use pypa/build, pypa/installer or other
2023-09-29T23:59:18,500           standards-based tools.

2023-09-29T23:59:18,501           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2023-09-29T23:59:18,501           ********************************************************************************

2023-09-29T23:59:18,503   !!
2023-09-29T23:59:18,503     self.initialize_options()
2023-09-29T23:59:18,510   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-09-29T23:59:18,511   !!

2023-09-29T23:59:18,512           ********************************************************************************
2023-09-29T23:59:18,513           Usage of dash-separated 'description-content-type' will not be supported in future
2023-09-29T23:59:18,513           versions. Please use the underscore name 'description_content_type' instead.

2023-09-29T23:59:18,514           This deprecation is overdue, please update your project and remove deprecated
2023-09-29T23:59:18,515           calls to avoid build errors in the future.

2023-09-29T23:59:18,516           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-09-29T23:59:18,516           ********************************************************************************

2023-09-29T23:59:18,517   !!
2023-09-29T23:59:18,518     opt = self.warn_dash_deprecation(opt, section)
2023-09-29T23:59:18,524   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-09-29T23:59:18,524   !!

2023-09-29T23:59:18,525           ********************************************************************************
2023-09-29T23:59:18,526           Usage of dash-separated 'setup-requires' will not be supported in future
2023-09-29T23:59:18,526           versions. Please use the underscore name 'setup_requires' instead.

2023-09-29T23:59:18,527           This deprecation is overdue, please update your project and remove deprecated
2023-09-29T23:59:18,528           calls to avoid build errors in the future.

2023-09-29T23:59:18,529           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-09-29T23:59:18,530           ********************************************************************************

2023-09-29T23:59:18,531   !!
2023-09-29T23:59:18,531     opt = self.warn_dash_deprecation(opt, section)
2023-09-29T23:59:18,532   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-09-29T23:59:18,533   !!

2023-09-29T23:59:18,534           ********************************************************************************
2023-09-29T23:59:18,534           Usage of dash-separated 'install-requires' will not be supported in future
2023-09-29T23:59:18,535           versions. Please use the underscore name 'install_requires' instead.

2023-09-29T23:59:18,535           This deprecation is overdue, please update your project and remove deprecated
2023-09-29T23:59:18,536           calls to avoid build errors in the future.

2023-09-29T23:59:18,537           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-09-29T23:59:18,537           ********************************************************************************

2023-09-29T23:59:18,538   !!
2023-09-29T23:59:18,538     opt = self.warn_dash_deprecation(opt, section)
2023-09-29T23:59:18,539   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-09-29T23:59:18,539   !!

2023-09-29T23:59:18,540           ********************************************************************************
2023-09-29T23:59:18,541           Usage of dash-separated 'zip-safe' will not be supported in future
2023-09-29T23:59:18,541           versions. Please use the underscore name 'zip_safe' instead.

2023-09-29T23:59:18,542           This deprecation is overdue, please update your project and remove deprecated
2023-09-29T23:59:18,543           calls to avoid build errors in the future.

2023-09-29T23:59:18,543           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-09-29T23:59:18,544           ********************************************************************************

2023-09-29T23:59:18,545   !!
2023-09-29T23:59:18,545     opt = self.warn_dash_deprecation(opt, section)
2023-09-29T23:59:18,569   running dist_info
2023-09-29T23:59:18,571   creating /tmp/pip-modern-metadata-jd81yyy8/vermouth.egg-info
2023-09-29T23:59:18,576   writing /tmp/pip-modern-metadata-jd81yyy8/vermouth.egg-info/PKG-INFO
2023-09-29T23:59:18,581   writing dependency_links to /tmp/pip-modern-metadata-jd81yyy8/vermouth.egg-info/dependency_links.txt
2023-09-29T23:59:18,583   writing requirements to /tmp/pip-modern-metadata-jd81yyy8/vermouth.egg-info/requires.txt
2023-09-29T23:59:18,584   writing top-level names to /tmp/pip-modern-metadata-jd81yyy8/vermouth.egg-info/top_level.txt
2023-09-29T23:59:18,600   [pbr] Processing SOURCES.txt
2023-09-29T23:59:18,600   writing manifest file '/tmp/pip-modern-metadata-jd81yyy8/vermouth.egg-info/SOURCES.txt'
2023-09-29T23:59:18,788   warning: no files found matching 'AUTHORS'
2023-09-29T23:59:18,789   warning: no files found matching 'ChangeLog'
2023-09-29T23:59:18,790   warning: no previously-included files found matching '.gitignore'
2023-09-29T23:59:18,790   warning: no previously-included files found matching '.gitreview'
2023-09-29T23:59:18,792   warning: no previously-included files matching '*.pyc' found anywhere in distribution
2023-09-29T23:59:18,863   adding license file 'LICENSE'
2023-09-29T23:59:18,881   writing manifest file '/tmp/pip-modern-metadata-jd81yyy8/vermouth.egg-info/SOURCES.txt'
2023-09-29T23:59:18,883   creating '/tmp/pip-modern-metadata-jd81yyy8/vermouth-0.9.5.dist-info'
2023-09-29T23:59:18,946   The [wheel] section is deprecated. Use [bdist_wheel] instead.
2023-09-29T23:59:19,087   Preparing metadata (pyproject.toml): finished with status 'done'
2023-09-29T23:59:19,092   Source in /tmp/pip-wheel-gtlvochk/vermouth_8fffa8ecc3034fbd8f21c2cc397798d8 has version 0.9.5, which satisfies requirement vermouth==0.9.5 from https://files.pythonhosted.org/packages/0a/9b/b4318b5b2e2ec08885ac6eaf41e0fab500d3eb77341c1556e283b7bda837/vermouth-0.9.5.tar.gz
2023-09-29T23:59:19,093   Removed vermouth==0.9.5 from https://files.pythonhosted.org/packages/0a/9b/b4318b5b2e2ec08885ac6eaf41e0fab500d3eb77341c1556e283b7bda837/vermouth-0.9.5.tar.gz from build tracker '/tmp/pip-build-tracker-8t_fdfg0'
2023-09-29T23:59:19,098 Created temporary directory: /tmp/pip-unpack-mmjlclqj
2023-09-29T23:59:19,099 Created temporary directory: /tmp/pip-unpack-oz2cwm64
2023-09-29T23:59:19,108 Building wheels for collected packages: vermouth
2023-09-29T23:59:19,113   Created temporary directory: /tmp/pip-wheel-0d5jndg7
2023-09-29T23:59:19,113   Destination directory: /tmp/pip-wheel-0d5jndg7
2023-09-29T23:59:19,115   Building wheel for vermouth (pyproject.toml): started
2023-09-29T23:59:19,116   Running command Building wheel for vermouth (pyproject.toml)
2023-09-29T23:59:19,795   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/command/develop.py:40: EasyInstallDeprecationWarning: easy_install command is deprecated.
2023-09-29T23:59:19,795   !!

2023-09-29T23:59:19,796           ********************************************************************************
2023-09-29T23:59:19,797           Please avoid running ``setup.py`` and ``easy_install``.
2023-09-29T23:59:19,797           Instead, use pypa/build, pypa/installer or other
2023-09-29T23:59:19,798           standards-based tools.

2023-09-29T23:59:19,799           See https://github.com/pypa/setuptools/issues/917 for details.
2023-09-29T23:59:19,799           ********************************************************************************

2023-09-29T23:59:19,800   !!
2023-09-29T23:59:19,801     easy_install.initialize_options(self)
2023-09-29T23:59:19,812   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-09-29T23:59:19,813   !!

2023-09-29T23:59:19,814           ********************************************************************************
2023-09-29T23:59:19,814           Usage of dash-separated 'description-content-type' will not be supported in future
2023-09-29T23:59:19,815           versions. Please use the underscore name 'description_content_type' instead.

2023-09-29T23:59:19,816           This deprecation is overdue, please update your project and remove deprecated
2023-09-29T23:59:19,817           calls to avoid build errors in the future.

2023-09-29T23:59:19,818           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-09-29T23:59:19,818           ********************************************************************************

2023-09-29T23:59:19,819   !!
2023-09-29T23:59:19,820     opt = self.warn_dash_deprecation(opt, section)
2023-09-29T23:59:19,827   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-09-29T23:59:19,827   !!

2023-09-29T23:59:19,828           ********************************************************************************
2023-09-29T23:59:19,829           Usage of dash-separated 'setup-requires' will not be supported in future
2023-09-29T23:59:19,829           versions. Please use the underscore name 'setup_requires' instead.

2023-09-29T23:59:19,831           This deprecation is overdue, please update your project and remove deprecated
2023-09-29T23:59:19,831           calls to avoid build errors in the future.

2023-09-29T23:59:19,832           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-09-29T23:59:19,833           ********************************************************************************

2023-09-29T23:59:19,834   !!
2023-09-29T23:59:19,834     opt = self.warn_dash_deprecation(opt, section)
2023-09-29T23:59:19,835   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-09-29T23:59:19,836   !!

2023-09-29T23:59:19,837           ********************************************************************************
2023-09-29T23:59:19,837           Usage of dash-separated 'install-requires' will not be supported in future
2023-09-29T23:59:19,838           versions. Please use the underscore name 'install_requires' instead.

2023-09-29T23:59:19,839           This deprecation is overdue, please update your project and remove deprecated
2023-09-29T23:59:19,840           calls to avoid build errors in the future.

2023-09-29T23:59:19,841           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-09-29T23:59:19,841           ********************************************************************************

2023-09-29T23:59:19,842   !!
2023-09-29T23:59:19,843     opt = self.warn_dash_deprecation(opt, section)
2023-09-29T23:59:19,843   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-09-29T23:59:19,844   !!

2023-09-29T23:59:19,845           ********************************************************************************
2023-09-29T23:59:19,845           Usage of dash-separated 'zip-safe' will not be supported in future
2023-09-29T23:59:19,846           versions. Please use the underscore name 'zip_safe' instead.

2023-09-29T23:59:19,847           This deprecation is overdue, please update your project and remove deprecated
2023-09-29T23:59:19,847           calls to avoid build errors in the future.

2023-09-29T23:59:19,848           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-09-29T23:59:19,849           ********************************************************************************

2023-09-29T23:59:19,850   !!
2023-09-29T23:59:19,850     opt = self.warn_dash_deprecation(opt, section)
2023-09-29T23:59:19,919   running bdist_wheel
2023-09-29T23:59:19,928   The [wheel] section is deprecated. Use [bdist_wheel] instead.
2023-09-29T23:59:19,944   running build
2023-09-29T23:59:19,945   running build_py
2023-09-29T23:59:19,953   creating build
2023-09-29T23:59:19,954   creating build/lib
2023-09-29T23:59:19,955   creating build/lib/vermouth
2023-09-29T23:59:19,955   creating build/lib/vermouth/dssp
2023-09-29T23:59:19,957   copying vermouth/dssp/__init__.py -> build/lib/vermouth/dssp
2023-09-29T23:59:19,959   copying vermouth/dssp/dssp.py -> build/lib/vermouth/dssp
2023-09-29T23:59:19,962   creating build/lib/vermouth/tests
2023-09-29T23:59:19,963   creating build/lib/vermouth/tests/integration_tests
2023-09-29T23:59:19,963   copying vermouth/tests/integration_tests/test_integration.py -> build/lib/vermouth/tests/integration_tests
2023-09-29T23:59:19,966   copying vermouth/tests/integration_tests/__init__.py -> build/lib/vermouth/tests/integration_tests
2023-09-29T23:59:19,968   copying vermouth/ismags.py -> build/lib/vermouth
2023-09-29T23:59:19,971   copying vermouth/parser_utils.py -> build/lib/vermouth
2023-09-29T23:59:19,974   copying vermouth/molecule.py -> build/lib/vermouth
2023-09-29T23:59:19,977   copying vermouth/system.py -> build/lib/vermouth
2023-09-29T23:59:19,979   copying vermouth/geometry.py -> build/lib/vermouth
2023-09-29T23:59:19,980   copying vermouth/map_input.py -> build/lib/vermouth
2023-09-29T23:59:19,983   copying vermouth/forcefield.py -> build/lib/vermouth
2023-09-29T23:59:19,985   copying vermouth/map_parser.py -> build/lib/vermouth
2023-09-29T23:59:19,988   copying vermouth/graph_utils.py -> build/lib/vermouth
2023-09-29T23:59:19,990   copying vermouth/file_writer.py -> build/lib/vermouth
2023-09-29T23:59:19,992   copying vermouth/citation_parser.py -> build/lib/vermouth
2023-09-29T23:59:19,994   copying vermouth/selectors.py -> build/lib/vermouth
2023-09-29T23:59:19,996   copying vermouth/edge_tuning.py -> build/lib/vermouth
2023-09-29T23:59:19,999   copying vermouth/ffinput.py -> build/lib/vermouth
2023-09-29T23:59:20,003   copying vermouth/__init__.py -> build/lib/vermouth
2023-09-29T23:59:20,005   copying vermouth/utils.py -> build/lib/vermouth
2023-09-29T23:59:20,008   copying vermouth/log_helpers.py -> build/lib/vermouth
2023-09-29T23:59:20,010   copying vermouth/truncating_formatter.py -> build/lib/vermouth
2023-09-29T23:59:20,014   creating build/lib/vermouth/gmx
2023-09-29T23:59:20,015   copying vermouth/gmx/rtp.py -> build/lib/vermouth/gmx
2023-09-29T23:59:20,018   copying vermouth/gmx/itp_read.py -> build/lib/vermouth/gmx
2023-09-29T23:59:20,021   copying vermouth/gmx/itp.py -> build/lib/vermouth/gmx
2023-09-29T23:59:20,023   copying vermouth/gmx/__init__.py -> build/lib/vermouth/gmx
2023-09-29T23:59:20,025   copying vermouth/gmx/gro.py -> build/lib/vermouth/gmx
2023-09-29T23:59:20,028   creating build/lib/vermouth/pdb
2023-09-29T23:59:20,029   copying vermouth/pdb/pdb.py -> build/lib/vermouth/pdb
2023-09-29T23:59:20,032   copying vermouth/pdb/__init__.py -> build/lib/vermouth/pdb
2023-09-29T23:59:20,035   creating build/lib/vermouth/processors
2023-09-29T23:59:20,036   copying vermouth/processors/quote.py -> build/lib/vermouth/processors
2023-09-29T23:59:20,039   copying vermouth/processors/apply_rubber_band.py -> build/lib/vermouth/processors
2023-09-29T23:59:20,041   copying vermouth/processors/canonicalize_modifications.py -> build/lib/vermouth/processors
2023-09-29T23:59:20,044   copying vermouth/processors/merge_all_molecules.py -> build/lib/vermouth/processors
2023-09-29T23:59:20,046   copying vermouth/processors/do_mapping.py -> build/lib/vermouth/processors
2023-09-29T23:59:20,049   copying vermouth/processors/set_molecule_meta.py -> build/lib/vermouth/processors
2023-09-29T23:59:20,051   copying vermouth/processors/go_vs_includes.py -> build/lib/vermouth/processors
2023-09-29T23:59:20,054   copying vermouth/processors/sort_molecule_atoms.py -> build/lib/vermouth/processors
2023-09-29T23:59:20,056   copying vermouth/processors/pdb_reader.py -> build/lib/vermouth/processors
2023-09-29T23:59:20,058   copying vermouth/processors/name_moltype.py -> build/lib/vermouth/processors
2023-09-29T23:59:20,060   copying vermouth/processors/tune_cystein_bridges.py -> build/lib/vermouth/processors
2023-09-29T23:59:20,063   copying vermouth/processors/rename_modified_residues.py -> build/lib/vermouth/processors
2023-09-29T23:59:20,065   copying vermouth/processors/add_molecule_edges.py -> build/lib/vermouth/processors
2023-09-29T23:59:20,068   copying vermouth/processors/do_links.py -> build/lib/vermouth/processors
2023-09-29T23:59:20,070   copying vermouth/processors/attach_mass.py -> build/lib/vermouth/processors
2023-09-29T23:59:20,073   copying vermouth/processors/merge_chains.py -> build/lib/vermouth/processors
2023-09-29T23:59:20,075   copying vermouth/processors/repair_graph.py -> build/lib/vermouth/processors
2023-09-29T23:59:20,078   copying vermouth/processors/processor.py -> build/lib/vermouth/processors
2023-09-29T23:59:20,080   copying vermouth/processors/locate_charge_dummies.py -> build/lib/vermouth/processors
2023-09-29T23:59:20,082   copying vermouth/processors/gro_reader.py -> build/lib/vermouth/processors
2023-09-29T23:59:20,084   copying vermouth/processors/annotate_mut_mod.py -> build/lib/vermouth/processors
2023-09-29T23:59:20,087   copying vermouth/processors/make_bonds.py -> build/lib/vermouth/processors
2023-09-29T23:59:20,090   copying vermouth/processors/__init__.py -> build/lib/vermouth/processors
2023-09-29T23:59:20,092   copying vermouth/processors/average_beads.py -> build/lib/vermouth/processors
2023-09-29T23:59:20,094   copying vermouth/processors/apply_posres.py -> build/lib/vermouth/processors
2023-09-29T23:59:20,098   copying vermouth/tests/test_make_bonds.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,101   copying vermouth/tests/test_molecule.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,104   copying vermouth/tests/test_selectors.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,107   copying vermouth/tests/test_set_molecule_meta.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,109   copying vermouth/tests/test_repair_graph.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,111   copying vermouth/tests/datafiles.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,114   copying vermouth/tests/test_graph_utils.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,116   copying vermouth/tests/test_ff_files.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,119   copying vermouth/tests/test_do_mapping.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,122   copying vermouth/tests/test_sort_molecule_atoms.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,124   copying vermouth/tests/test_links.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,127   copying vermouth/tests/test_file_writer.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,129   copying vermouth/tests/test_apply_rubber_band.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,132   copying vermouth/tests/test_go_vs_includes.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,134   copying vermouth/tests/molecule_strategies.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,136   copying vermouth/tests/test_utils.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,139   copying vermouth/tests/test_map_input.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,141   copying vermouth/tests/test_annotate_mut_mod.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,144   copying vermouth/tests/test_ptm_detection.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,146   copying vermouth/tests/test_edge_tuning.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,149   copying vermouth/tests/helper_functions.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,151   copying vermouth/tests/test_dssp.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,154   copying vermouth/tests/test_ismags.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,157   copying vermouth/tests/test_native_forcefield.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,159   copying vermouth/tests/test_itp_files.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,162   copying vermouth/tests/test_tune_cystein_bridges.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,164   copying vermouth/tests/test_section_parser.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,166   copying vermouth/tests/test_add_molecule_edges.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,168   copying vermouth/tests/test_name_moltype.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,171   copying vermouth/tests/test_geometry.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,173   copying vermouth/tests/test_forcefield.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,176   copying vermouth/tests/test_version.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,178   copying vermouth/tests/test_grappa.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,181   copying vermouth/tests/test_logging.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,183   copying vermouth/tests/__init__.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,186   copying vermouth/tests/test_map_parser.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,188   copying vermouth/tests/test_average_beads.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,191   copying vermouth/tests/test_ffinput.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,194   copying vermouth/tests/test_mapping_integrative.py -> build/lib/vermouth/tests
2023-09-29T23:59:20,196   running egg_info
2023-09-29T23:59:20,201   writing vermouth.egg-info/PKG-INFO
2023-09-29T23:59:20,204   writing dependency_links to vermouth.egg-info/dependency_links.txt
2023-09-29T23:59:20,207   writing requirements to vermouth.egg-info/requires.txt
2023-09-29T23:59:20,208   writing top-level names to vermouth.egg-info/top_level.txt
2023-09-29T23:59:20,223   [pbr] Reusing existing SOURCES.txt
2023-09-29T23:59:20,238   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'vermouth.data' is absent from the `packages` configuration.
2023-09-29T23:59:20,238   !!

2023-09-29T23:59:20,240           ********************************************************************************
2023-09-29T23:59:20,240           ############################
2023-09-29T23:59:20,241           # Package would be ignored #
2023-09-29T23:59:20,241           ############################
2023-09-29T23:59:20,242           Python recognizes 'vermouth.data' as an importable package[^1],
2023-09-29T23:59:20,243           but it is absent from setuptools' `packages` configuration.

2023-09-29T23:59:20,244           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T23:59:20,244           package, please make sure that 'vermouth.data' is explicitly added
2023-09-29T23:59:20,245           to the `packages` configuration field.

2023-09-29T23:59:20,245           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T23:59:20,246           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T23:59:20,246           instead of `find_packages(...)`/`find:`).

2023-09-29T23:59:20,247           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T23:59:20,248           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T23:59:20,249           If you don't want 'vermouth.data' to be distributed and are
2023-09-29T23:59:20,249           already explicitly excluding 'vermouth.data' via
2023-09-29T23:59:20,250           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T23:59:20,250           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T23:59:20,251           combination with a more fine grained `package-data` configuration.

2023-09-29T23:59:20,252           You can read more about "package data files" on setuptools documentation page:

2023-09-29T23:59:20,252           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T23:59:20,254           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T23:59:20,254                 even if it does not contain any `.py` files.
2023-09-29T23:59:20,255                 On the other hand, currently there is no concept of package data
2023-09-29T23:59:20,255                 directory, all directories are treated like packages.
2023-09-29T23:59:20,256           ********************************************************************************

2023-09-29T23:59:20,257   !!
2023-09-29T23:59:20,257     check.warn(importable)
2023-09-29T23:59:20,258   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'vermouth.data.force_fields.amber' is absent from the `packages` configuration.
2023-09-29T23:59:20,258   !!

2023-09-29T23:59:20,259           ********************************************************************************
2023-09-29T23:59:20,260           ############################
2023-09-29T23:59:20,260           # Package would be ignored #
2023-09-29T23:59:20,261           ############################
2023-09-29T23:59:20,262           Python recognizes 'vermouth.data.force_fields.amber' as an importable package[^1],
2023-09-29T23:59:20,262           but it is absent from setuptools' `packages` configuration.

2023-09-29T23:59:20,263           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T23:59:20,264           package, please make sure that 'vermouth.data.force_fields.amber' is explicitly added
2023-09-29T23:59:20,264           to the `packages` configuration field.

2023-09-29T23:59:20,265           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T23:59:20,266           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T23:59:20,267           instead of `find_packages(...)`/`find:`).

2023-09-29T23:59:20,268           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T23:59:20,269           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T23:59:20,270           If you don't want 'vermouth.data.force_fields.amber' to be distributed and are
2023-09-29T23:59:20,271           already explicitly excluding 'vermouth.data.force_fields.amber' via
2023-09-29T23:59:20,271           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T23:59:20,272           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T23:59:20,273           combination with a more fine grained `package-data` configuration.

2023-09-29T23:59:20,274           You can read more about "package data files" on setuptools documentation page:

2023-09-29T23:59:20,274           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T23:59:20,276           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T23:59:20,276                 even if it does not contain any `.py` files.
2023-09-29T23:59:20,277                 On the other hand, currently there is no concept of package data
2023-09-29T23:59:20,277                 directory, all directories are treated like packages.
2023-09-29T23:59:20,277           ********************************************************************************

2023-09-29T23:59:20,278   !!
2023-09-29T23:59:20,279     check.warn(importable)
2023-09-29T23:59:20,279   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'vermouth.data.force_fields.charmm' is absent from the `packages` configuration.
2023-09-29T23:59:20,280   !!

2023-09-29T23:59:20,280           ********************************************************************************
2023-09-29T23:59:20,281           ############################
2023-09-29T23:59:20,281           # Package would be ignored #
2023-09-29T23:59:20,282           ############################
2023-09-29T23:59:20,282           Python recognizes 'vermouth.data.force_fields.charmm' as an importable package[^1],
2023-09-29T23:59:20,283           but it is absent from setuptools' `packages` configuration.

2023-09-29T23:59:20,283           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T23:59:20,284           package, please make sure that 'vermouth.data.force_fields.charmm' is explicitly added
2023-09-29T23:59:20,284           to the `packages` configuration field.

2023-09-29T23:59:20,285           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T23:59:20,286           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T23:59:20,286           instead of `find_packages(...)`/`find:`).

2023-09-29T23:59:20,287           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T23:59:20,288           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T23:59:20,289           If you don't want 'vermouth.data.force_fields.charmm' to be distributed and are
2023-09-29T23:59:20,290           already explicitly excluding 'vermouth.data.force_fields.charmm' via
2023-09-29T23:59:20,291           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T23:59:20,291           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T23:59:20,292           combination with a more fine grained `package-data` configuration.

2023-09-29T23:59:20,293           You can read more about "package data files" on setuptools documentation page:

2023-09-29T23:59:20,294           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T23:59:20,295           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T23:59:20,296                 even if it does not contain any `.py` files.
2023-09-29T23:59:20,296                 On the other hand, currently there is no concept of package data
2023-09-29T23:59:20,297                 directory, all directories are treated like packages.
2023-09-29T23:59:20,297           ********************************************************************************

2023-09-29T23:59:20,299   !!
2023-09-29T23:59:20,299     check.warn(importable)
2023-09-29T23:59:20,300   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'vermouth.data.force_fields.elnedyn21' is absent from the `packages` configuration.
2023-09-29T23:59:20,300   !!

2023-09-29T23:59:20,301           ********************************************************************************
2023-09-29T23:59:20,302           ############################
2023-09-29T23:59:20,302           # Package would be ignored #
2023-09-29T23:59:20,302           ############################
2023-09-29T23:59:20,303           Python recognizes 'vermouth.data.force_fields.elnedyn21' as an importable package[^1],
2023-09-29T23:59:20,303           but it is absent from setuptools' `packages` configuration.

2023-09-29T23:59:20,304           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T23:59:20,304           package, please make sure that 'vermouth.data.force_fields.elnedyn21' is explicitly added
2023-09-29T23:59:20,305           to the `packages` configuration field.

2023-09-29T23:59:20,305           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T23:59:20,306           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T23:59:20,306           instead of `find_packages(...)`/`find:`).

2023-09-29T23:59:20,307           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T23:59:20,308           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T23:59:20,309           If you don't want 'vermouth.data.force_fields.elnedyn21' to be distributed and are
2023-09-29T23:59:20,309           already explicitly excluding 'vermouth.data.force_fields.elnedyn21' via
2023-09-29T23:59:20,310           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T23:59:20,310           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T23:59:20,311           combination with a more fine grained `package-data` configuration.

2023-09-29T23:59:20,311           You can read more about "package data files" on setuptools documentation page:

2023-09-29T23:59:20,312           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T23:59:20,314           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T23:59:20,314                 even if it does not contain any `.py` files.
2023-09-29T23:59:20,315                 On the other hand, currently there is no concept of package data
2023-09-29T23:59:20,315                 directory, all directories are treated like packages.
2023-09-29T23:59:20,316           ********************************************************************************

2023-09-29T23:59:20,317   !!
2023-09-29T23:59:20,317     check.warn(importable)
2023-09-29T23:59:20,318   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'vermouth.data.force_fields.elnedyn22' is absent from the `packages` configuration.
2023-09-29T23:59:20,318   !!

2023-09-29T23:59:20,319           ********************************************************************************
2023-09-29T23:59:20,320           ############################
2023-09-29T23:59:20,320           # Package would be ignored #
2023-09-29T23:59:20,321           ############################
2023-09-29T23:59:20,321           Python recognizes 'vermouth.data.force_fields.elnedyn22' as an importable package[^1],
2023-09-29T23:59:20,322           but it is absent from setuptools' `packages` configuration.

2023-09-29T23:59:20,323           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T23:59:20,323           package, please make sure that 'vermouth.data.force_fields.elnedyn22' is explicitly added
2023-09-29T23:59:20,324           to the `packages` configuration field.

2023-09-29T23:59:20,325           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T23:59:20,326           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T23:59:20,326           instead of `find_packages(...)`/`find:`).

2023-09-29T23:59:20,327           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T23:59:20,328           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T23:59:20,329           If you don't want 'vermouth.data.force_fields.elnedyn22' to be distributed and are
2023-09-29T23:59:20,329           already explicitly excluding 'vermouth.data.force_fields.elnedyn22' via
2023-09-29T23:59:20,329           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T23:59:20,330           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T23:59:20,330           combination with a more fine grained `package-data` configuration.

2023-09-29T23:59:20,331           You can read more about "package data files" on setuptools documentation page:

2023-09-29T23:59:20,332           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T23:59:20,333           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T23:59:20,334                 even if it does not contain any `.py` files.
2023-09-29T23:59:20,334                 On the other hand, currently there is no concept of package data
2023-09-29T23:59:20,335                 directory, all directories are treated like packages.
2023-09-29T23:59:20,335           ********************************************************************************

2023-09-29T23:59:20,336   !!
2023-09-29T23:59:20,336     check.warn(importable)
2023-09-29T23:59:20,337   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'vermouth.data.force_fields.elnedyn22p' is absent from the `packages` configuration.
2023-09-29T23:59:20,337   !!

2023-09-29T23:59:20,338           ********************************************************************************
2023-09-29T23:59:20,339           ############################
2023-09-29T23:59:20,339           # Package would be ignored #
2023-09-29T23:59:20,340           ############################
2023-09-29T23:59:20,340           Python recognizes 'vermouth.data.force_fields.elnedyn22p' as an importable package[^1],
2023-09-29T23:59:20,340           but it is absent from setuptools' `packages` configuration.

2023-09-29T23:59:20,341           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T23:59:20,342           package, please make sure that 'vermouth.data.force_fields.elnedyn22p' is explicitly added
2023-09-29T23:59:20,342           to the `packages` configuration field.

2023-09-29T23:59:20,343           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T23:59:20,344           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T23:59:20,344           instead of `find_packages(...)`/`find:`).

2023-09-29T23:59:20,346           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T23:59:20,347           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T23:59:20,348           If you don't want 'vermouth.data.force_fields.elnedyn22p' to be distributed and are
2023-09-29T23:59:20,348           already explicitly excluding 'vermouth.data.force_fields.elnedyn22p' via
2023-09-29T23:59:20,349           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T23:59:20,349           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T23:59:20,350           combination with a more fine grained `package-data` configuration.

2023-09-29T23:59:20,351           You can read more about "package data files" on setuptools documentation page:

2023-09-29T23:59:20,352           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T23:59:20,353           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T23:59:20,354                 even if it does not contain any `.py` files.
2023-09-29T23:59:20,355                 On the other hand, currently there is no concept of package data
2023-09-29T23:59:20,355                 directory, all directories are treated like packages.
2023-09-29T23:59:20,356           ********************************************************************************

2023-09-29T23:59:20,356   !!
2023-09-29T23:59:20,357     check.warn(importable)
2023-09-29T23:59:20,357   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'vermouth.data.force_fields.gromos' is absent from the `packages` configuration.
2023-09-29T23:59:20,357   !!

2023-09-29T23:59:20,358           ********************************************************************************
2023-09-29T23:59:20,358           ############################
2023-09-29T23:59:20,359           # Package would be ignored #
2023-09-29T23:59:20,359           ############################
2023-09-29T23:59:20,360           Python recognizes 'vermouth.data.force_fields.gromos' as an importable package[^1],
2023-09-29T23:59:20,360           but it is absent from setuptools' `packages` configuration.

2023-09-29T23:59:20,361           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T23:59:20,361           package, please make sure that 'vermouth.data.force_fields.gromos' is explicitly added
2023-09-29T23:59:20,362           to the `packages` configuration field.

2023-09-29T23:59:20,363           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T23:59:20,363           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T23:59:20,364           instead of `find_packages(...)`/`find:`).

2023-09-29T23:59:20,365           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T23:59:20,365           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T23:59:20,366           If you don't want 'vermouth.data.force_fields.gromos' to be distributed and are
2023-09-29T23:59:20,367           already explicitly excluding 'vermouth.data.force_fields.gromos' via
2023-09-29T23:59:20,367           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T23:59:20,368           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T23:59:20,368           combination with a more fine grained `package-data` configuration.

2023-09-29T23:59:20,369           You can read more about "package data files" on setuptools documentation page:

2023-09-29T23:59:20,370           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T23:59:20,371           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T23:59:20,372                 even if it does not contain any `.py` files.
2023-09-29T23:59:20,372                 On the other hand, currently there is no concept of package data
2023-09-29T23:59:20,373                 directory, all directories are treated like packages.
2023-09-29T23:59:20,373           ********************************************************************************

2023-09-29T23:59:20,374   !!
2023-09-29T23:59:20,375     check.warn(importable)
2023-09-29T23:59:20,375   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'vermouth.data.force_fields.martini22' is absent from the `packages` configuration.
2023-09-29T23:59:20,376   !!

2023-09-29T23:59:20,377           ********************************************************************************
2023-09-29T23:59:20,377           ############################
2023-09-29T23:59:20,378           # Package would be ignored #
2023-09-29T23:59:20,378           ############################
2023-09-29T23:59:20,379           Python recognizes 'vermouth.data.force_fields.martini22' as an importable package[^1],
2023-09-29T23:59:20,379           but it is absent from setuptools' `packages` configuration.

2023-09-29T23:59:20,380           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T23:59:20,381           package, please make sure that 'vermouth.data.force_fields.martini22' is explicitly added
2023-09-29T23:59:20,381           to the `packages` configuration field.

2023-09-29T23:59:20,382           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T23:59:20,382           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T23:59:20,382           instead of `find_packages(...)`/`find:`).

2023-09-29T23:59:20,383           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T23:59:20,384           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T23:59:20,384           If you don't want 'vermouth.data.force_fields.martini22' to be distributed and are
2023-09-29T23:59:20,385           already explicitly excluding 'vermouth.data.force_fields.martini22' via
2023-09-29T23:59:20,385           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T23:59:20,385           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T23:59:20,386           combination with a more fine grained `package-data` configuration.

2023-09-29T23:59:20,386           You can read more about "package data files" on setuptools documentation page:

2023-09-29T23:59:20,387           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T23:59:20,388           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T23:59:20,389                 even if it does not contain any `.py` files.
2023-09-29T23:59:20,389                 On the other hand, currently there is no concept of package data
2023-09-29T23:59:20,389                 directory, all directories are treated like packages.
2023-09-29T23:59:20,390           ********************************************************************************

2023-09-29T23:59:20,391   !!
2023-09-29T23:59:20,391     check.warn(importable)
2023-09-29T23:59:20,391   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'vermouth.data.force_fields.martini22p' is absent from the `packages` configuration.
2023-09-29T23:59:20,392   !!

2023-09-29T23:59:20,393           ********************************************************************************
2023-09-29T23:59:20,393           ############################
2023-09-29T23:59:20,394           # Package would be ignored #
2023-09-29T23:59:20,394           ############################
2023-09-29T23:59:20,395           Python recognizes 'vermouth.data.force_fields.martini22p' as an importable package[^1],
2023-09-29T23:59:20,395           but it is absent from setuptools' `packages` configuration.

2023-09-29T23:59:20,396           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T23:59:20,396           package, please make sure that 'vermouth.data.force_fields.martini22p' is explicitly added
2023-09-29T23:59:20,397           to the `packages` configuration field.

2023-09-29T23:59:20,398           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T23:59:20,398           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T23:59:20,399           instead of `find_packages(...)`/`find:`).

2023-09-29T23:59:20,399           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T23:59:20,400           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T23:59:20,401           If you don't want 'vermouth.data.force_fields.martini22p' to be distributed and are
2023-09-29T23:59:20,402           already explicitly excluding 'vermouth.data.force_fields.martini22p' via
2023-09-29T23:59:20,403           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T23:59:20,403           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T23:59:20,404           combination with a more fine grained `package-data` configuration.

2023-09-29T23:59:20,404           You can read more about "package data files" on setuptools documentation page:

2023-09-29T23:59:20,405           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T23:59:20,406           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T23:59:20,407                 even if it does not contain any `.py` files.
2023-09-29T23:59:20,407                 On the other hand, currently there is no concept of package data
2023-09-29T23:59:20,407                 directory, all directories are treated like packages.
2023-09-29T23:59:20,408           ********************************************************************************

2023-09-29T23:59:20,409   !!
2023-09-29T23:59:20,409     check.warn(importable)
2023-09-29T23:59:20,410   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'vermouth.data.force_fields.martini3001' is absent from the `packages` configuration.
2023-09-29T23:59:20,410   !!

2023-09-29T23:59:20,411           ********************************************************************************
2023-09-29T23:59:20,411           ############################
2023-09-29T23:59:20,412           # Package would be ignored #
2023-09-29T23:59:20,412           ############################
2023-09-29T23:59:20,412           Python recognizes 'vermouth.data.force_fields.martini3001' as an importable package[^1],
2023-09-29T23:59:20,413           but it is absent from setuptools' `packages` configuration.

2023-09-29T23:59:20,414           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T23:59:20,414           package, please make sure that 'vermouth.data.force_fields.martini3001' is explicitly added
2023-09-29T23:59:20,415           to the `packages` configuration field.

2023-09-29T23:59:20,416           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T23:59:20,416           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T23:59:20,417           instead of `find_packages(...)`/`find:`).

2023-09-29T23:59:20,418           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T23:59:20,419           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T23:59:20,420           If you don't want 'vermouth.data.force_fields.martini3001' to be distributed and are
2023-09-29T23:59:20,420           already explicitly excluding 'vermouth.data.force_fields.martini3001' via
2023-09-29T23:59:20,421           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T23:59:20,421           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T23:59:20,422           combination with a more fine grained `package-data` configuration.

2023-09-29T23:59:20,423           You can read more about "package data files" on setuptools documentation page:

2023-09-29T23:59:20,424           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T23:59:20,426           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T23:59:20,426                 even if it does not contain any `.py` files.
2023-09-29T23:59:20,427                 On the other hand, currently there is no concept of package data
2023-09-29T23:59:20,427                 directory, all directories are treated like packages.
2023-09-29T23:59:20,428           ********************************************************************************

2023-09-29T23:59:20,429   !!
2023-09-29T23:59:20,430     check.warn(importable)
2023-09-29T23:59:20,430   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'vermouth.data.force_fields.martini30b32' is absent from the `packages` configuration.
2023-09-29T23:59:20,431   !!

2023-09-29T23:59:20,432           ********************************************************************************
2023-09-29T23:59:20,432           ############################
2023-09-29T23:59:20,433           # Package would be ignored #
2023-09-29T23:59:20,433           ############################
2023-09-29T23:59:20,434           Python recognizes 'vermouth.data.force_fields.martini30b32' as an importable package[^1],
2023-09-29T23:59:20,434           but it is absent from setuptools' `packages` configuration.

2023-09-29T23:59:20,435           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T23:59:20,436           package, please make sure that 'vermouth.data.force_fields.martini30b32' is explicitly added
2023-09-29T23:59:20,436           to the `packages` configuration field.

2023-09-29T23:59:20,437           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T23:59:20,438           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T23:59:20,438           instead of `find_packages(...)`/`find:`).

2023-09-29T23:59:20,439           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T23:59:20,440           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T23:59:20,441           If you don't want 'vermouth.data.force_fields.martini30b32' to be distributed and are
2023-09-29T23:59:20,441           already explicitly excluding 'vermouth.data.force_fields.martini30b32' via
2023-09-29T23:59:20,442           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T23:59:20,442           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T23:59:20,443           combination with a more fine grained `package-data` configuration.

2023-09-29T23:59:20,444           You can read more about "package data files" on setuptools documentation page:

2023-09-29T23:59:20,445           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T23:59:20,446           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T23:59:20,447                 even if it does not contain any `.py` files.
2023-09-29T23:59:20,448                 On the other hand, currently there is no concept of package data
2023-09-29T23:59:20,448                 directory, all directories are treated like packages.
2023-09-29T23:59:20,449           ********************************************************************************

2023-09-29T23:59:20,450   !!
2023-09-29T23:59:20,450     check.warn(importable)
2023-09-29T23:59:20,451   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'vermouth.data.force_fields.martini30dev' is absent from the `packages` configuration.
2023-09-29T23:59:20,451   !!

2023-09-29T23:59:20,452           ********************************************************************************
2023-09-29T23:59:20,453           ############################
2023-09-29T23:59:20,454           # Package would be ignored #
2023-09-29T23:59:20,454           ############################
2023-09-29T23:59:20,455           Python recognizes 'vermouth.data.force_fields.martini30dev' as an importable package[^1],
2023-09-29T23:59:20,455           but it is absent from setuptools' `packages` configuration.

2023-09-29T23:59:20,456           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T23:59:20,457           package, please make sure that 'vermouth.data.force_fields.martini30dev' is explicitly added
2023-09-29T23:59:20,458           to the `packages` configuration field.

2023-09-29T23:59:20,459           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T23:59:20,459           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T23:59:20,460           instead of `find_packages(...)`/`find:`).

2023-09-29T23:59:20,460           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T23:59:20,461           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T23:59:20,462           If you don't want 'vermouth.data.force_fields.martini30dev' to be distributed and are
2023-09-29T23:59:20,462           already explicitly excluding 'vermouth.data.force_fields.martini30dev' via
2023-09-29T23:59:20,463           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T23:59:20,463           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T23:59:20,464           combination with a more fine grained `package-data` configuration.

2023-09-29T23:59:20,464           You can read more about "package data files" on setuptools documentation page:

2023-09-29T23:59:20,465           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T23:59:20,466           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T23:59:20,467                 even if it does not contain any `.py` files.
2023-09-29T23:59:20,467                 On the other hand, currently there is no concept of package data
2023-09-29T23:59:20,467                 directory, all directories are treated like packages.
2023-09-29T23:59:20,468           ********************************************************************************

2023-09-29T23:59:20,468   !!
2023-09-29T23:59:20,469     check.warn(importable)
2023-09-29T23:59:20,469   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'vermouth.data.mappings' is absent from the `packages` configuration.
2023-09-29T23:59:20,470   !!

2023-09-29T23:59:20,471           ********************************************************************************
2023-09-29T23:59:20,471           ############################
2023-09-29T23:59:20,472           # Package would be ignored #
2023-09-29T23:59:20,472           ############################
2023-09-29T23:59:20,473           Python recognizes 'vermouth.data.mappings' as an importable package[^1],
2023-09-29T23:59:20,473           but it is absent from setuptools' `packages` configuration.

2023-09-29T23:59:20,474           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T23:59:20,474           package, please make sure that 'vermouth.data.mappings' is explicitly added
2023-09-29T23:59:20,475           to the `packages` configuration field.

2023-09-29T23:59:20,476           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T23:59:20,476           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T23:59:20,477           instead of `find_packages(...)`/`find:`).

2023-09-29T23:59:20,478           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T23:59:20,479           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T23:59:20,480           If you don't want 'vermouth.data.mappings' to be distributed and are
2023-09-29T23:59:20,480           already explicitly excluding 'vermouth.data.mappings' via
2023-09-29T23:59:20,481           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T23:59:20,481           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T23:59:20,482           combination with a more fine grained `package-data` configuration.

2023-09-29T23:59:20,483           You can read more about "package data files" on setuptools documentation page:

2023-09-29T23:59:20,484           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T23:59:20,486           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T23:59:20,486                 even if it does not contain any `.py` files.
2023-09-29T23:59:20,487                 On the other hand, currently there is no concept of package data
2023-09-29T23:59:20,487                 directory, all directories are treated like packages.
2023-09-29T23:59:20,487           ********************************************************************************

2023-09-29T23:59:20,488   !!
2023-09-29T23:59:20,488     check.warn(importable)
2023-09-29T23:59:20,489   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'vermouth.data.mappings.elnedyn' is absent from the `packages` configuration.
2023-09-29T23:59:20,489   !!

2023-09-29T23:59:20,490           ********************************************************************************
2023-09-29T23:59:20,490           ############################
2023-09-29T23:59:20,490           # Package would be ignored #
2023-09-29T23:59:20,491           ############################
2023-09-29T23:59:20,491           Python recognizes 'vermouth.data.mappings.elnedyn' as an importable package[^1],
2023-09-29T23:59:20,492           but it is absent from setuptools' `packages` configuration.

2023-09-29T23:59:20,492           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T23:59:20,493           package, please make sure that 'vermouth.data.mappings.elnedyn' is explicitly added
2023-09-29T23:59:20,493           to the `packages` configuration field.

2023-09-29T23:59:20,494           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T23:59:20,494           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T23:59:20,495           instead of `find_packages(...)`/`find:`).

2023-09-29T23:59:20,496           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T23:59:20,497           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T23:59:20,498           If you don't want 'vermouth.data.mappings.elnedyn' to be distributed and are
2023-09-29T23:59:20,498           already explicitly excluding 'vermouth.data.mappings.elnedyn' via
2023-09-29T23:59:20,499           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T23:59:20,499           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T23:59:20,500           combination with a more fine grained `package-data` configuration.

2023-09-29T23:59:20,501           You can read more about "package data files" on setuptools documentation page:

2023-09-29T23:59:20,502           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T23:59:20,503           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T23:59:20,504                 even if it does not contain any `.py` files.
2023-09-29T23:59:20,504                 On the other hand, currently there is no concept of package data
2023-09-29T23:59:20,505                 directory, all directories are treated like packages.
2023-09-29T23:59:20,505           ********************************************************************************

2023-09-29T23:59:20,506   !!
2023-09-29T23:59:20,506     check.warn(importable)
2023-09-29T23:59:20,507   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'vermouth.data.mappings.elnedyn.elnedyn22p' is absent from the `packages` configuration.
2023-09-29T23:59:20,507   !!

2023-09-29T23:59:20,508           ********************************************************************************
2023-09-29T23:59:20,509           ############################
2023-09-29T23:59:20,509           # Package would be ignored #
2023-09-29T23:59:20,510           ############################
2023-09-29T23:59:20,511           Python recognizes 'vermouth.data.mappings.elnedyn.elnedyn22p' as an importable package[^1],
2023-09-29T23:59:20,511           but it is absent from setuptools' `packages` configuration.

2023-09-29T23:59:20,512           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T23:59:20,513           package, please make sure that 'vermouth.data.mappings.elnedyn.elnedyn22p' is explicitly added
2023-09-29T23:59:20,513           to the `packages` configuration field.

2023-09-29T23:59:20,514           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T23:59:20,514           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T23:59:20,515           instead of `find_packages(...)`/`find:`).

2023-09-29T23:59:20,516           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T23:59:20,517           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T23:59:20,518           If you don't want 'vermouth.data.mappings.elnedyn.elnedyn22p' to be distributed and are
2023-09-29T23:59:20,518           already explicitly excluding 'vermouth.data.mappings.elnedyn.elnedyn22p' via
2023-09-29T23:59:20,518           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T23:59:20,519           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T23:59:20,519           combination with a more fine grained `package-data` configuration.

2023-09-29T23:59:20,520           You can read more about "package data files" on setuptools documentation page:

2023-09-29T23:59:20,521           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T23:59:20,523           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T23:59:20,523                 even if it does not contain any `.py` files.
2023-09-29T23:59:20,523                 On the other hand, currently there is no concept of package data
2023-09-29T23:59:20,524                 directory, all directories are treated like packages.
2023-09-29T23:59:20,524           ********************************************************************************

2023-09-29T23:59:20,525   !!
2023-09-29T23:59:20,526     check.warn(importable)
2023-09-29T23:59:20,526   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'vermouth.data.mappings.elnedyn21' is absent from the `packages` configuration.
2023-09-29T23:59:20,527   !!

2023-09-29T23:59:20,528           ********************************************************************************
2023-09-29T23:59:20,528           ############################
2023-09-29T23:59:20,529           # Package would be ignored #
2023-09-29T23:59:20,529           ############################
2023-09-29T23:59:20,530           Python recognizes 'vermouth.data.mappings.elnedyn21' as an importable package[^1],
2023-09-29T23:59:20,530           but it is absent from setuptools' `packages` configuration.

2023-09-29T23:59:20,531           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T23:59:20,532           package, please make sure that 'vermouth.data.mappings.elnedyn21' is explicitly added
2023-09-29T23:59:20,532           to the `packages` configuration field.

2023-09-29T23:59:20,534           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T23:59:20,534           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T23:59:20,535           instead of `find_packages(...)`/`find:`).

2023-09-29T23:59:20,536           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T23:59:20,537           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T23:59:20,538           If you don't want 'vermouth.data.mappings.elnedyn21' to be distributed and are
2023-09-29T23:59:20,539           already explicitly excluding 'vermouth.data.mappings.elnedyn21' via
2023-09-29T23:59:20,539           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T23:59:20,540           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T23:59:20,540           combination with a more fine grained `package-data` configuration.

2023-09-29T23:59:20,541           You can read more about "package data files" on setuptools documentation page:

2023-09-29T23:59:20,542           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T23:59:20,543           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T23:59:20,543                 even if it does not contain any `.py` files.
2023-09-29T23:59:20,544                 On the other hand, currently there is no concept of package data
2023-09-29T23:59:20,544                 directory, all directories are treated like packages.
2023-09-29T23:59:20,545           ********************************************************************************

2023-09-29T23:59:20,545   !!
2023-09-29T23:59:20,546     check.warn(importable)
2023-09-29T23:59:20,546   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'vermouth.data.mappings.martini3001' is absent from the `packages` configuration.
2023-09-29T23:59:20,547   !!

2023-09-29T23:59:20,547           ********************************************************************************
2023-09-29T23:59:20,548           ############################
2023-09-29T23:59:20,548           # Package would be ignored #
2023-09-29T23:59:20,549           ############################
2023-09-29T23:59:20,549           Python recognizes 'vermouth.data.mappings.martini3001' as an importable package[^1],
2023-09-29T23:59:20,550           but it is absent from setuptools' `packages` configuration.

2023-09-29T23:59:20,550           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T23:59:20,551           package, please make sure that 'vermouth.data.mappings.martini3001' is explicitly added
2023-09-29T23:59:20,551           to the `packages` configuration field.

2023-09-29T23:59:20,552           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T23:59:20,553           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T23:59:20,553           instead of `find_packages(...)`/`find:`).

2023-09-29T23:59:20,554           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T23:59:20,555           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T23:59:20,556           If you don't want 'vermouth.data.mappings.martini3001' to be distributed and are
2023-09-29T23:59:20,556           already explicitly excluding 'vermouth.data.mappings.martini3001' via
2023-09-29T23:59:20,557           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T23:59:20,557           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T23:59:20,557           combination with a more fine grained `package-data` configuration.

2023-09-29T23:59:20,558           You can read more about "package data files" on setuptools documentation page:

2023-09-29T23:59:20,559           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T23:59:20,561           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T23:59:20,561                 even if it does not contain any `.py` files.
2023-09-29T23:59:20,562                 On the other hand, currently there is no concept of package data
2023-09-29T23:59:20,562                 directory, all directories are treated like packages.
2023-09-29T23:59:20,563           ********************************************************************************

2023-09-29T23:59:20,564   !!
2023-09-29T23:59:20,564     check.warn(importable)
2023-09-29T23:59:20,564   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'vermouth.data.mappings.martini30b32' is absent from the `packages` configuration.
2023-09-29T23:59:20,565   !!

2023-09-29T23:59:20,565           ********************************************************************************
2023-09-29T23:59:20,566           ############################
2023-09-29T23:59:20,566           # Package would be ignored #
2023-09-29T23:59:20,567           ############################
2023-09-29T23:59:20,567           Python recognizes 'vermouth.data.mappings.martini30b32' as an importable package[^1],
2023-09-29T23:59:20,567           but it is absent from setuptools' `packages` configuration.

2023-09-29T23:59:20,568           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T23:59:20,569           package, please make sure that 'vermouth.data.mappings.martini30b32' is explicitly added
2023-09-29T23:59:20,569           to the `packages` configuration field.

2023-09-29T23:59:20,570           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T23:59:20,570           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T23:59:20,571           instead of `find_packages(...)`/`find:`).

2023-09-29T23:59:20,572           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T23:59:20,573           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T23:59:20,574           If you don't want 'vermouth.data.mappings.martini30b32' to be distributed and are
2023-09-29T23:59:20,574           already explicitly excluding 'vermouth.data.mappings.martini30b32' via
2023-09-29T23:59:20,575           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T23:59:20,575           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T23:59:20,576           combination with a more fine grained `package-data` configuration.

2023-09-29T23:59:20,577           You can read more about "package data files" on setuptools documentation page:

2023-09-29T23:59:20,578           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T23:59:20,579           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T23:59:20,580                 even if it does not contain any `.py` files.
2023-09-29T23:59:20,580                 On the other hand, currently there is no concept of package data
2023-09-29T23:59:20,581                 directory, all directories are treated like packages.
2023-09-29T23:59:20,581           ********************************************************************************

2023-09-29T23:59:20,583   !!
2023-09-29T23:59:20,583     check.warn(importable)
2023-09-29T23:59:20,583   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'vermouth.graphing' is absent from the `packages` configuration.
2023-09-29T23:59:20,584   !!

2023-09-29T23:59:20,585           ********************************************************************************
2023-09-29T23:59:20,586           ############################
2023-09-29T23:59:20,586           # Package would be ignored #
2023-09-29T23:59:20,587           ############################
2023-09-29T23:59:20,587           Python recognizes 'vermouth.graphing' as an importable package[^1],
2023-09-29T23:59:20,588           but it is absent from setuptools' `packages` configuration.

2023-09-29T23:59:20,589           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T23:59:20,589           package, please make sure that 'vermouth.graphing' is explicitly added
2023-09-29T23:59:20,590           to the `packages` configuration field.

2023-09-29T23:59:20,591           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T23:59:20,592           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T23:59:20,592           instead of `find_packages(...)`/`find:`).

2023-09-29T23:59:20,593           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T23:59:20,594           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T23:59:20,594           If you don't want 'vermouth.graphing' to be distributed and are
2023-09-29T23:59:20,595           already explicitly excluding 'vermouth.graphing' via
2023-09-29T23:59:20,596           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T23:59:20,598           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T23:59:20,599           combination with a more fine grained `package-data` configuration.

2023-09-29T23:59:20,600           You can read more about "package data files" on setuptools documentation page:

2023-09-29T23:59:20,604           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T23:59:20,616           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T23:59:20,617                 even if it does not contain any `.py` files.
2023-09-29T23:59:20,617                 On the other hand, currently there is no concept of package data
2023-09-29T23:59:20,618                 directory, all directories are treated like packages.
2023-09-29T23:59:20,618           ********************************************************************************

2023-09-29T23:59:20,619   !!
2023-09-29T23:59:20,620     check.warn(importable)
2023-09-29T23:59:20,620   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'vermouth.tests.data' is absent from the `packages` configuration.
2023-09-29T23:59:20,620   !!

2023-09-29T23:59:20,622           ********************************************************************************
2023-09-29T23:59:20,622           ############################
2023-09-29T23:59:20,623           # Package would be ignored #
2023-09-29T23:59:20,623           ############################
2023-09-29T23:59:20,624           Python recognizes 'vermouth.tests.data' as an importable package[^1],
2023-09-29T23:59:20,624           but it is absent from setuptools' `packages` configuration.

2023-09-29T23:59:20,625           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T23:59:20,626           package, please make sure that 'vermouth.tests.data' is explicitly added
2023-09-29T23:59:20,626           to the `packages` configuration field.

2023-09-29T23:59:20,627           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T23:59:20,628           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T23:59:20,628           instead of `find_packages(...)`/`find:`).

2023-09-29T23:59:20,629           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T23:59:20,630           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T23:59:20,632           If you don't want 'vermouth.tests.data' to be distributed and are
2023-09-29T23:59:20,632           already explicitly excluding 'vermouth.tests.data' via
2023-09-29T23:59:20,633           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T23:59:20,634           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T23:59:20,634           combination with a more fine grained `package-data` configuration.

2023-09-29T23:59:20,635           You can read more about "package data files" on setuptools documentation page:

2023-09-29T23:59:20,636           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T23:59:20,638           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T23:59:20,639                 even if it does not contain any `.py` files.
2023-09-29T23:59:20,639                 On the other hand, currently there is no concept of package data
2023-09-29T23:59:20,640                 directory, all directories are treated like packages.
2023-09-29T23:59:20,640           ********************************************************************************

2023-09-29T23:59:20,641   !!
2023-09-29T23:59:20,642     check.warn(importable)
2023-09-29T23:59:20,642   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'vermouth.tests.data.dssp_tests' is absent from the `packages` configuration.
2023-09-29T23:59:20,643   !!

2023-09-29T23:59:20,644           ********************************************************************************
2023-09-29T23:59:20,644           ############################
2023-09-29T23:59:20,645           # Package would be ignored #
2023-09-29T23:59:20,645           ############################
2023-09-29T23:59:20,645           Python recognizes 'vermouth.tests.data.dssp_tests' as an importable package[^1],
2023-09-29T23:59:20,646           but it is absent from setuptools' `packages` configuration.

2023-09-29T23:59:20,647           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T23:59:20,647           package, please make sure that 'vermouth.tests.data.dssp_tests' is explicitly added
2023-09-29T23:59:20,648           to the `packages` configuration field.

2023-09-29T23:59:20,649           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T23:59:20,649           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T23:59:20,650           instead of `find_packages(...)`/`find:`).

2023-09-29T23:59:20,651           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T23:59:20,652           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T23:59:20,653           If you don't want 'vermouth.tests.data.dssp_tests' to be distributed and are
2023-09-29T23:59:20,653           already explicitly excluding 'vermouth.tests.data.dssp_tests' via
2023-09-29T23:59:20,654           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T23:59:20,654           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T23:59:20,655           combination with a more fine grained `package-data` configuration.

2023-09-29T23:59:20,656           You can read more about "package data files" on setuptools documentation page:

2023-09-29T23:59:20,657           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T23:59:20,660           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T23:59:20,660                 even if it does not contain any `.py` files.
2023-09-29T23:59:20,661                 On the other hand, currently there is no concept of package data
2023-09-29T23:59:20,661                 directory, all directories are treated like packages.
2023-09-29T23:59:20,662           ********************************************************************************

2023-09-29T23:59:20,663   !!
2023-09-29T23:59:20,664     check.warn(importable)
2023-09-29T23:59:20,664   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'vermouth.tests.data.force_fields' is absent from the `packages` configuration.
2023-09-29T23:59:20,665   !!

2023-09-29T23:59:20,666           ********************************************************************************
2023-09-29T23:59:20,667           ############################
2023-09-29T23:59:20,668           # Package would be ignored #
2023-09-29T23:59:20,668           ############################
2023-09-29T23:59:20,669           Python recognizes 'vermouth.tests.data.force_fields' as an importable package[^1],
2023-09-29T23:59:20,670           but it is absent from setuptools' `packages` configuration.

2023-09-29T23:59:20,671           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T23:59:20,671           package, please make sure that 'vermouth.tests.data.force_fields' is explicitly added
2023-09-29T23:59:20,672           to the `packages` configuration field.

2023-09-29T23:59:20,673           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T23:59:20,673           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T23:59:20,674           instead of `find_packages(...)`/`find:`).

2023-09-29T23:59:20,675           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T23:59:20,676           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T23:59:20,677           If you don't want 'vermouth.tests.data.force_fields' to be distributed and are
2023-09-29T23:59:20,677           already explicitly excluding 'vermouth.tests.data.force_fields' via
2023-09-29T23:59:20,678           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T23:59:20,678           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T23:59:20,679           combination with a more fine grained `package-data` configuration.

2023-09-29T23:59:20,680           You can read more about "package data files" on setuptools documentation page:

2023-09-29T23:59:20,681           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T23:59:20,683           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T23:59:20,684                 even if it does not contain any `.py` files.
2023-09-29T23:59:20,684                 On the other hand, currently there is no concept of package data
2023-09-29T23:59:20,685                 directory, all directories are treated like packages.
2023-09-29T23:59:20,685           ********************************************************************************

2023-09-29T23:59:20,686   !!
2023-09-29T23:59:20,687     check.warn(importable)
2023-09-29T23:59:20,687   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'vermouth.tests.data.force_fields.pepplane' is absent from the `packages` configuration.
2023-09-29T23:59:20,688   !!

2023-09-29T23:59:20,689           ********************************************************************************
2023-09-29T23:59:20,690           ############################
2023-09-29T23:59:20,690           # Package would be ignored #
2023-09-29T23:59:20,691           ############################
2023-09-29T23:59:20,692           Python recognizes 'vermouth.tests.data.force_fields.pepplane' as an importable package[^1],
2023-09-29T23:59:20,692           but it is absent from setuptools' `packages` configuration.

2023-09-29T23:59:20,693           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T23:59:20,695           package, please make sure that 'vermouth.tests.data.force_fields.pepplane' is explicitly added
2023-09-29T23:59:20,695           to the `packages` configuration field.

2023-09-29T23:59:20,696           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T23:59:20,697           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T23:59:20,697           instead of `find_packages(...)`/`find:`).

2023-09-29T23:59:20,698           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T23:59:20,699           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T23:59:20,700           If you don't want 'vermouth.tests.data.force_fields.pepplane' to be distributed and are
2023-09-29T23:59:20,701           already explicitly excluding 'vermouth.tests.data.force_fields.pepplane' via
2023-09-29T23:59:20,702           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T23:59:20,702           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T23:59:20,703           combination with a more fine grained `package-data` configuration.

2023-09-29T23:59:20,704           You can read more about "package data files" on setuptools documentation page:

2023-09-29T23:59:20,705           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T23:59:20,706           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T23:59:20,707                 even if it does not contain any `.py` files.
2023-09-29T23:59:20,707                 On the other hand, currently there is no concept of package data
2023-09-29T23:59:20,708                 directory, all directories are treated like packages.
2023-09-29T23:59:20,708           ********************************************************************************

2023-09-29T23:59:20,709   !!
2023-09-29T23:59:20,710     check.warn(importable)
2023-09-29T23:59:20,710   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'vermouth.tests.data.integration_tests' is absent from the `packages` configuration.
2023-09-29T23:59:20,711   !!

2023-09-29T23:59:20,712           ********************************************************************************
2023-09-29T23:59:20,713           ############################
2023-09-29T23:59:20,713           # Package would be ignored #
2023-09-29T23:59:20,714           ############################
2023-09-29T23:59:20,714           Python recognizes 'vermouth.tests.data.integration_tests' as an importable package[^1],
2023-09-29T23:59:20,715           but it is absent from setuptools' `packages` configuration.

2023-09-29T23:59:20,716           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T23:59:20,717           package, please make sure that 'vermouth.tests.data.integration_tests' is explicitly added
2023-09-29T23:59:20,717           to the `packages` configuration field.

2023-09-29T23:59:20,718           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T23:59:20,719           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T23:59:20,719           instead of `find_packages(...)`/`find:`).

2023-09-29T23:59:20,721           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T23:59:20,722           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T23:59:20,723           If you don't want 'vermouth.tests.data.integration_tests' to be distributed and are
2023-09-29T23:59:20,724           already explicitly excluding 'vermouth.tests.data.integration_tests' via
2023-09-29T23:59:20,725           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T23:59:20,725           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T23:59:20,726           combination with a more fine grained `package-data` configuration.

2023-09-29T23:59:20,727           You can read more about "package data files" on setuptools documentation page:

2023-09-29T23:59:20,728           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T23:59:20,729           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T23:59:20,730                 even if it does not contain any `.py` files.
2023-09-29T23:59:20,730                 On the other hand, currently there is no concept of package data
2023-09-29T23:59:20,731                 directory, all directories are treated like packages.
2023-09-29T23:59:20,731           ********************************************************************************

2023-09-29T23:59:20,732   !!
2023-09-29T23:59:20,733     check.warn(importable)
2023-09-29T23:59:20,734   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'vermouth.tests.data.mappings' is absent from the `packages` configuration.
2023-09-29T23:59:20,734   !!

2023-09-29T23:59:20,735           ********************************************************************************
2023-09-29T23:59:20,735           ############################
2023-09-29T23:59:20,736           # Package would be ignored #
2023-09-29T23:59:20,736           ############################
2023-09-29T23:59:20,736           Python recognizes 'vermouth.tests.data.mappings' as an importable package[^1],
2023-09-29T23:59:20,737           but it is absent from setuptools' `packages` configuration.

2023-09-29T23:59:20,738           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T23:59:20,738           package, please make sure that 'vermouth.tests.data.mappings' is explicitly added
2023-09-29T23:59:20,739           to the `packages` configuration field.

2023-09-29T23:59:20,739           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T23:59:20,740           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T23:59:20,740           instead of `find_packages(...)`/`find:`).

2023-09-29T23:59:20,741           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T23:59:20,742           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T23:59:20,743           If you don't want 'vermouth.tests.data.mappings' to be distributed and are
2023-09-29T23:59:20,744           already explicitly excluding 'vermouth.tests.data.mappings' via
2023-09-29T23:59:20,744           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T23:59:20,745           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T23:59:20,745           combination with a more fine grained `package-data` configuration.

2023-09-29T23:59:20,746           You can read more about "package data files" on setuptools documentation page:

2023-09-29T23:59:20,747           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T23:59:20,749           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T23:59:20,749                 even if it does not contain any `.py` files.
2023-09-29T23:59:20,750                 On the other hand, currently there is no concept of package data
2023-09-29T23:59:20,750                 directory, all directories are treated like packages.
2023-09-29T23:59:20,751           ********************************************************************************

2023-09-29T23:59:20,752   !!
2023-09-29T23:59:20,752     check.warn(importable)
2023-09-29T23:59:20,753   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'vermouth.tests.gmx' is absent from the `packages` configuration.
2023-09-29T23:59:20,753   !!

2023-09-29T23:59:20,754           ********************************************************************************
2023-09-29T23:59:20,755           ############################
2023-09-29T23:59:20,755           # Package would be ignored #
2023-09-29T23:59:20,756           ############################
2023-09-29T23:59:20,756           Python recognizes 'vermouth.tests.gmx' as an importable package[^1],
2023-09-29T23:59:20,757           but it is absent from setuptools' `packages` configuration.

2023-09-29T23:59:20,758           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T23:59:20,759           package, please make sure that 'vermouth.tests.gmx' is explicitly added
2023-09-29T23:59:20,759           to the `packages` configuration field.

2023-09-29T23:59:20,760           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T23:59:20,761           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T23:59:20,761           instead of `find_packages(...)`/`find:`).

2023-09-29T23:59:20,762           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T23:59:20,763           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T23:59:20,764           If you don't want 'vermouth.tests.gmx' to be distributed and are
2023-09-29T23:59:20,764           already explicitly excluding 'vermouth.tests.gmx' via
2023-09-29T23:59:20,765           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T23:59:20,765           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T23:59:20,766           combination with a more fine grained `package-data` configuration.

2023-09-29T23:59:20,767           You can read more about "package data files" on setuptools documentation page:

2023-09-29T23:59:20,768           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T23:59:20,770           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T23:59:20,770                 even if it does not contain any `.py` files.
2023-09-29T23:59:20,771                 On the other hand, currently there is no concept of package data
2023-09-29T23:59:20,771                 directory, all directories are treated like packages.
2023-09-29T23:59:20,772           ********************************************************************************

2023-09-29T23:59:20,773   !!
2023-09-29T23:59:20,773     check.warn(importable)
2023-09-29T23:59:20,774   /tmp/pip-build-env-gwoywrnl/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'vermouth.tests.pdb' is absent from the `packages` configuration.
2023-09-29T23:59:20,774   !!

2023-09-29T23:59:20,775           ********************************************************************************
2023-09-29T23:59:20,776           ############################
2023-09-29T23:59:20,776           # Package would be ignored #
2023-09-29T23:59:20,777           ############################
2023-09-29T23:59:20,777           Python recognizes 'vermouth.tests.pdb' as an importable package[^1],
2023-09-29T23:59:20,778           but it is absent from setuptools' `packages` configuration.

2023-09-29T23:59:20,779           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-29T23:59:20,779           package, please make sure that 'vermouth.tests.pdb' is explicitly added
2023-09-29T23:59:20,780           to the `packages` configuration field.

2023-09-29T23:59:20,781           Alternatively, you can also rely on setuptools' discovery methods
2023-09-29T23:59:20,781           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-29T23:59:20,782           instead of `find_packages(...)`/`find:`).

2023-09-29T23:59:20,783           You can read more about "package discovery" on setuptools documentation page:

2023-09-29T23:59:20,784           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-29T23:59:20,785           If you don't want 'vermouth.tests.pdb' to be distributed and are
2023-09-29T23:59:20,786           already explicitly excluding 'vermouth.tests.pdb' via
2023-09-29T23:59:20,786           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-29T23:59:20,787           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-29T23:59:20,788           combination with a more fine grained `package-data` configuration.

2023-09-29T23:59:20,789           You can read more about "package data files" on setuptools documentation page:

2023-09-29T23:59:20,790           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-29T23:59:20,791           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-29T23:59:20,792                 even if it does not contain any `.py` files.
2023-09-29T23:59:20,793                 On the other hand, currently there is no concept of package data
2023-09-29T23:59:20,793                 directory, all directories are treated like packages.
2023-09-29T23:59:20,794           ********************************************************************************

2023-09-29T23:59:20,795   !!
2023-09-29T23:59:20,795     check.warn(importable)
2023-09-29T23:59:20,795   creating build/lib/vermouth/data
2023-09-29T23:59:20,796   copying vermouth/data/quotes.txt -> build/lib/vermouth/data
2023-09-29T23:59:20,796   creating build/lib/vermouth/data/force_fields
2023-09-29T23:59:20,797   creating build/lib/vermouth/data/force_fields/amber
2023-09-29T23:59:20,797   copying vermouth/data/force_fields/amber/aminoacids.rtp -> build/lib/vermouth/data/force_fields/amber
2023-09-29T23:59:20,798   copying vermouth/data/force_fields/amber/modifications.ff -> build/lib/vermouth/data/force_fields/amber
2023-09-29T23:59:20,798   creating build/lib/vermouth/data/force_fields/charmm
2023-09-29T23:59:20,799   copying vermouth/data/force_fields/charmm/aminoacids.rtp -> build/lib/vermouth/data/force_fields/charmm
2023-09-29T23:59:20,799   copying vermouth/data/force_fields/charmm/modifications.ff -> build/lib/vermouth/data/force_fields/charmm
2023-09-29T23:59:20,800   copying vermouth/data/force_fields/charmm/small_molecule_charmm.ff -> build/lib/vermouth/data/force_fields/charmm
2023-09-29T23:59:20,800   creating build/lib/vermouth/data/force_fields/elnedyn21
2023-09-29T23:59:20,801   copying vermouth/data/force_fields/elnedyn21/aminoacids.ff -> build/lib/vermouth/data/force_fields/elnedyn21
2023-09-29T23:59:20,801   copying vermouth/data/force_fields/elnedyn21/citations.bib -> build/lib/vermouth/data/force_fields/elnedyn21
2023-09-29T23:59:20,802   copying vermouth/data/force_fields/elnedyn21/general.ff -> build/lib/vermouth/data/force_fields/elnedyn21
2023-09-29T23:59:20,802   copying vermouth/data/force_fields/elnedyn21/modifications.ff -> build/lib/vermouth/data/force_fields/elnedyn21
2023-09-29T23:59:20,803   creating build/lib/vermouth/data/force_fields/elnedyn22
2023-09-29T23:59:20,804   copying vermouth/data/force_fields/elnedyn22/aminoacids.ff -> build/lib/vermouth/data/force_fields/elnedyn22
2023-09-29T23:59:20,804   copying vermouth/data/force_fields/elnedyn22/citations.bib -> build/lib/vermouth/data/force_fields/elnedyn22
2023-09-29T23:59:20,805   copying vermouth/data/force_fields/elnedyn22/general.ff -> build/lib/vermouth/data/force_fields/elnedyn22
2023-09-29T23:59:20,805   copying vermouth/data/force_fields/elnedyn22/modifications.ff -> build/lib/vermouth/data/force_fields/elnedyn22
2023-09-29T23:59:20,806   creating build/lib/vermouth/data/force_fields/elnedyn22p
2023-09-29T23:59:20,806   copying vermouth/data/force_fields/elnedyn22p/aminoacids.ff -> build/lib/vermouth/data/force_fields/elnedyn22p
2023-09-29T23:59:20,807   copying vermouth/data/force_fields/elnedyn22p/citations.bib -> build/lib/vermouth/data/force_fields/elnedyn22p
2023-09-29T23:59:20,807   copying vermouth/data/force_fields/elnedyn22p/general.ff -> build/lib/vermouth/data/force_fields/elnedyn22p
2023-09-29T23:59:20,808   copying vermouth/data/force_fields/elnedyn22p/modifications.ff -> build/lib/vermouth/data/force_fields/elnedyn22p
2023-09-29T23:59:20,808   creating build/lib/vermouth/data/force_fields/gromos
2023-09-29T23:59:20,809   copying vermouth/data/force_fields/gromos/aminoacids.rtp -> build/lib/vermouth/data/force_fields/gromos
2023-09-29T23:59:20,809   copying vermouth/data/force_fields/gromos/cofactors.ff -> build/lib/vermouth/data/force_fields/gromos
2023-09-29T23:59:20,810   copying vermouth/data/force_fields/gromos/modifications.ff -> build/lib/vermouth/data/force_fields/gromos
2023-09-29T23:59:20,810   creating build/lib/vermouth/data/force_fields/martini22
2023-09-29T23:59:20,811   copying vermouth/data/force_fields/martini22/aminoacids.ff -> build/lib/vermouth/data/force_fields/martini22
2023-09-29T23:59:20,811   copying vermouth/data/force_fields/martini22/citations.bib -> build/lib/vermouth/data/force_fields/martini22
2023-09-29T23:59:20,812   copying vermouth/data/force_fields/martini22/general.ff -> build/lib/vermouth/data/force_fields/martini22
2023-09-29T23:59:20,813   copying vermouth/data/force_fields/martini22/modifications.ff -> build/lib/vermouth/data/force_fields/martini22
2023-09-29T23:59:20,813   copying vermouth/data/force_fields/martini22/nucleotides.ff -> build/lib/vermouth/data/force_fields/martini22
2023-09-29T23:59:20,814   creating build/lib/vermouth/data/force_fields/martini22p
2023-09-29T23:59:20,814   copying vermouth/data/force_fields/martini22p/aminoacids.ff -> build/lib/vermouth/data/force_fields/martini22p
2023-09-29T23:59:20,814   copying vermouth/data/force_fields/martini22p/citations.bib -> build/lib/vermouth/data/force_fields/martini22p
2023-09-29T23:59:20,815   copying vermouth/data/force_fields/martini22p/general.ff -> build/lib/vermouth/data/force_fields/martini22p
2023-09-29T23:59:20,815   copying vermouth/data/force_fields/martini22p/modifications.ff -> build/lib/vermouth/data/force_fields/martini22p
2023-09-29T23:59:20,816   creating build/lib/vermouth/data/force_fields/martini3001
2023-09-29T23:59:20,816   copying vermouth/data/force_fields/martini3001/aminoacids.ff -> build/lib/vermouth/data/force_fields/martini3001
2023-09-29T23:59:20,817   copying vermouth/data/force_fields/martini3001/citations.bib -> build/lib/vermouth/data/force_fields/martini3001
2023-09-29T23:59:20,817   copying vermouth/data/force_fields/martini3001/general.ff -> build/lib/vermouth/data/force_fields/martini3001
2023-09-29T23:59:20,818   copying vermouth/data/force_fields/martini3001/modifications.ff -> build/lib/vermouth/data/force_fields/martini3001
2023-09-29T23:59:20,818   copying vermouth/data/force_fields/martini3001/small_molecule_martini3.ff -> build/lib/vermouth/data/force_fields/martini3001
2023-09-29T23:59:20,819   creating build/lib/vermouth/data/force_fields/martini30b32
2023-09-29T23:59:20,819   copying vermouth/data/force_fields/martini30b32/aminoacids.ff -> build/lib/vermouth/data/force_fields/martini30b32
2023-09-29T23:59:20,820   copying vermouth/data/force_fields/martini30b32/citations.bib -> build/lib/vermouth/data/force_fields/martini30b32
2023-09-29T23:59:20,820   copying vermouth/data/force_fields/martini30b32/modifications.ff -> build/lib/vermouth/data/force_fields/martini30b32
2023-09-29T23:59:20,820   copying vermouth/data/force_fields/martini30b32/small_molecules.ff -> build/lib/vermouth/data/force_fields/martini30b32
2023-09-29T23:59:20,821   creating build/lib/vermouth/data/force_fields/martini30dev
2023-09-29T23:59:20,821   copying vermouth/data/force_fields/martini30dev/aminoacids.ff -> build/lib/vermouth/data/force_fields/martini30dev
2023-09-29T23:59:20,822   copying vermouth/data/force_fields/martini30dev/citations.bib -> build/lib/vermouth/data/force_fields/martini30dev
2023-09-29T23:59:20,822   copying vermouth/data/force_fields/martini30dev/modifications.ff -> build/lib/vermouth/data/force_fields/martini30dev
2023-09-29T23:59:20,823   creating build/lib/vermouth/data/mappings
2023-09-29T23:59:20,824   copying vermouth/data/mappings/ala.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,824   copying vermouth/data/mappings/ala.gromos.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,825   copying vermouth/data/mappings/arg.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,825   copying vermouth/data/mappings/arg.charmm36.martini22p.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,825   copying vermouth/data/mappings/arg.gromos.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,826   copying vermouth/data/mappings/asn.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,827   copying vermouth/data/mappings/asn.charmm36.martini22p.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,827   copying vermouth/data/mappings/asn.gromos.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,828   copying vermouth/data/mappings/asp.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,828   copying vermouth/data/mappings/asp.charmm36.martini22p.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,829   copying vermouth/data/mappings/asp.gromos.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,829   copying vermouth/data/mappings/asp0.gromos.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,830   copying vermouth/data/mappings/chol.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,830   copying vermouth/data/mappings/cys.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,831   copying vermouth/data/mappings/cys.gromos.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,832   copying vermouth/data/mappings/dmpc.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,832   copying vermouth/data/mappings/dopc.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,833   copying vermouth/data/mappings/dppc.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,833   copying vermouth/data/mappings/dppg.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,834   copying vermouth/data/mappings/fmn.gromos.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,834   copying vermouth/data/mappings/gln.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,835   copying vermouth/data/mappings/gln.charmm36.martini22p.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,835   copying vermouth/data/mappings/gln.gromos.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,836   copying vermouth/data/mappings/glu.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,836   copying vermouth/data/mappings/glu.charmm36.martini22p.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,837   copying vermouth/data/mappings/glu.gromos.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,837   copying vermouth/data/mappings/glu0.gromos.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,838   copying vermouth/data/mappings/gly.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,838   copying vermouth/data/mappings/gly.gromos.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,839   copying vermouth/data/mappings/his.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,840   copying vermouth/data/mappings/his.gromos.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,840   copying vermouth/data/mappings/hsd.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,841   copying vermouth/data/mappings/hse.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,841   copying vermouth/data/mappings/hsp.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,842   copying vermouth/data/mappings/ile.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,842   copying vermouth/data/mappings/ile.gromos.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,843   copying vermouth/data/mappings/leu.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,844   copying vermouth/data/mappings/leu.gromos.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,844   copying vermouth/data/mappings/lys.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,845   copying vermouth/data/mappings/lys.charmm36.martini22p.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,845   copying vermouth/data/mappings/lys.gromos.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,846   copying vermouth/data/mappings/met.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,846   copying vermouth/data/mappings/met.gromos.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,847   copying vermouth/data/mappings/modifications.gromos.mapping -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,848   copying vermouth/data/mappings/modifications.mapping -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,848   copying vermouth/data/mappings/nad.gromos.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,849   copying vermouth/data/mappings/phe.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,850   copying vermouth/data/mappings/phe.gromos.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,850   copying vermouth/data/mappings/popc.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,851   copying vermouth/data/mappings/pope.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,851   copying vermouth/data/mappings/popg.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,852   copying vermouth/data/mappings/pops.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,853   copying vermouth/data/mappings/pro.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,855   copying vermouth/data/mappings/pro.gromos.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,857   copying vermouth/data/mappings/ser.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,859   copying vermouth/data/mappings/ser.charmm36.martini22p.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,861   copying vermouth/data/mappings/ser.gromos.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,864   copying vermouth/data/mappings/thr.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,866   copying vermouth/data/mappings/thr.charmm36.martini22p.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,868   copying vermouth/data/mappings/thr.gromos.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,870   copying vermouth/data/mappings/tpp.gromos.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,872   copying vermouth/data/mappings/trp.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,875   copying vermouth/data/mappings/trp.gromos.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,877   copying vermouth/data/mappings/tyr.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,879   copying vermouth/data/mappings/tyr.gromos.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,881   copying vermouth/data/mappings/val.charmm36.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,884   copying vermouth/data/mappings/val.gromos.map -> build/lib/vermouth/data/mappings
2023-09-29T23:59:20,886   creating build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,887   copying vermouth/data/mappings/elnedyn/ala.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,890   copying vermouth/data/mappings/elnedyn/arg.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,892   copying vermouth/data/mappings/elnedyn/asn.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,894   copying vermouth/data/mappings/elnedyn/asp.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,896   copying vermouth/data/mappings/elnedyn/chol.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,898   copying vermouth/data/mappings/elnedyn/cys.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,900   copying vermouth/data/mappings/elnedyn/dmpc.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,902   copying vermouth/data/mappings/elnedyn/dopc.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,904   copying vermouth/data/mappings/elnedyn/dppc.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,907   copying vermouth/data/mappings/elnedyn/dppg.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,909   copying vermouth/data/mappings/elnedyn/gln.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,911   copying vermouth/data/mappings/elnedyn/glu.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,913   copying vermouth/data/mappings/elnedyn/gly.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,915   copying vermouth/data/mappings/elnedyn/his.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,917   copying vermouth/data/mappings/elnedyn/ile.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,919   copying vermouth/data/mappings/elnedyn/leu.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,921   copying vermouth/data/mappings/elnedyn/lys.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,923   copying vermouth/data/mappings/elnedyn/met.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,925   copying vermouth/data/mappings/elnedyn/modifications.elnedyn21.mapping -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,927   copying vermouth/data/mappings/elnedyn/modifications.elnedyn22.mapping -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,929   copying vermouth/data/mappings/elnedyn/modifications.elnedyn22p.mapping -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,931   copying vermouth/data/mappings/elnedyn/phe.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,933   copying vermouth/data/mappings/elnedyn/popc.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,936   copying vermouth/data/mappings/elnedyn/pope.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,938   copying vermouth/data/mappings/elnedyn/popg.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,940   copying vermouth/data/mappings/elnedyn/pops.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,943   copying vermouth/data/mappings/elnedyn/pro.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,945   copying vermouth/data/mappings/elnedyn/ser.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,947   copying vermouth/data/mappings/elnedyn/thr.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,949   copying vermouth/data/mappings/elnedyn/trp.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,951   copying vermouth/data/mappings/elnedyn/tyr.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,953   copying vermouth/data/mappings/elnedyn/val.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn
2023-09-29T23:59:20,955   creating build/lib/vermouth/data/mappings/elnedyn/elnedyn22p
2023-09-29T23:59:20,956   copying vermouth/data/mappings/elnedyn/elnedyn22p/arg.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn/elnedyn22p
2023-09-29T23:59:20,958   copying vermouth/data/mappings/elnedyn/elnedyn22p/asn.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn/elnedyn22p
2023-09-29T23:59:20,960   copying vermouth/data/mappings/elnedyn/elnedyn22p/asp.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn/elnedyn22p
2023-09-29T23:59:20,962   copying vermouth/data/mappings/elnedyn/elnedyn22p/gln.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn/elnedyn22p
2023-09-29T23:59:20,964   copying vermouth/data/mappings/elnedyn/elnedyn22p/glu.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn/elnedyn22p
2023-09-29T23:59:20,967   copying vermouth/data/mappings/elnedyn/elnedyn22p/lys.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn/elnedyn22p
2023-09-29T23:59:20,969   copying vermouth/data/mappings/elnedyn/elnedyn22p/ser.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn/elnedyn22p
2023-09-29T23:59:20,971   copying vermouth/data/mappings/elnedyn/elnedyn22p/thr.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn/elnedyn22p
2023-09-29T23:59:20,973   creating build/lib/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:20,974   copying vermouth/data/mappings/elnedyn21/ala.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:20,977   copying vermouth/data/mappings/elnedyn21/arg.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:20,979   copying vermouth/data/mappings/elnedyn21/arg.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:20,981   copying vermouth/data/mappings/elnedyn21/asn.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:20,983   copying vermouth/data/mappings/elnedyn21/asn.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:20,985   copying vermouth/data/mappings/elnedyn21/asp.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:20,987   copying vermouth/data/mappings/elnedyn21/asp.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:20,989   copying vermouth/data/mappings/elnedyn21/cys.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:20,990   copying vermouth/data/mappings/elnedyn21/gln.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:20,992   copying vermouth/data/mappings/elnedyn21/gln.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:20,994   copying vermouth/data/mappings/elnedyn21/glu.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:20,996   copying vermouth/data/mappings/elnedyn21/glu.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:20,998   copying vermouth/data/mappings/elnedyn21/gly.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:21,000   copying vermouth/data/mappings/elnedyn21/his.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:21,002   copying vermouth/data/mappings/elnedyn21/ile.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:21,004   copying vermouth/data/mappings/elnedyn21/leu.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:21,006   copying vermouth/data/mappings/elnedyn21/lys.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:21,008   copying vermouth/data/mappings/elnedyn21/lys.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:21,010   copying vermouth/data/mappings/elnedyn21/met.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:21,012   copying vermouth/data/mappings/elnedyn21/modifications.mapping -> build/lib/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:21,014   copying vermouth/data/mappings/elnedyn21/phe.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:21,016   copying vermouth/data/mappings/elnedyn21/pro.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:21,018   copying vermouth/data/mappings/elnedyn21/ser.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:21,020   copying vermouth/data/mappings/elnedyn21/ser.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:21,022   copying vermouth/data/mappings/elnedyn21/thr.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:21,024   copying vermouth/data/mappings/elnedyn21/thr.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:21,026   copying vermouth/data/mappings/elnedyn21/trp.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:21,028   copying vermouth/data/mappings/elnedyn21/tyr.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:21,030   copying vermouth/data/mappings/elnedyn21/val.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:21,032   creating build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,033   copying vermouth/data/mappings/martini3001/ala.amber.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,035   copying vermouth/data/mappings/martini3001/ala.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,038   copying vermouth/data/mappings/martini3001/antr.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,040   copying vermouth/data/mappings/martini3001/arg.amber.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,042   copying vermouth/data/mappings/martini3001/arg.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,044   copying vermouth/data/mappings/martini3001/ash.amber.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,046   copying vermouth/data/mappings/martini3001/asn.amber.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,048   copying vermouth/data/mappings/martini3001/asn.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,050   copying vermouth/data/mappings/martini3001/asp.amber.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,053   copying vermouth/data/mappings/martini3001/asp.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,055   copying vermouth/data/mappings/martini3001/aspp.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,057   copying vermouth/data/mappings/martini3001/bald.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,059   copying vermouth/data/mappings/martini3001/benz.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,061   copying vermouth/data/mappings/martini3001/c3.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,063   copying vermouth/data/mappings/martini3001/chxe.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,065   copying vermouth/data/mappings/martini3001/cpen.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,066   copying vermouth/data/mappings/martini3001/cume.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,068   copying vermouth/data/mappings/martini3001/cys.amber.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,070   copying vermouth/data/mappings/martini3001/cys.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,072   copying vermouth/data/mappings/martini3001/diol.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,074   copying vermouth/data/mappings/martini3001/diox.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,076   copying vermouth/data/mappings/martini3001/dman.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,078   copying vermouth/data/mappings/martini3001/eben.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,080   copying vermouth/data/mappings/martini3001/fura.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,082   copying vermouth/data/mappings/martini3001/glh.amber.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,084   copying vermouth/data/mappings/martini3001/gln.amber.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,086   copying vermouth/data/mappings/martini3001/gln.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,088   copying vermouth/data/mappings/martini3001/glu.amber.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,090   copying vermouth/data/mappings/martini3001/glu.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,092   copying vermouth/data/mappings/martini3001/glup.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,094   copying vermouth/data/mappings/martini3001/gly.amber.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,096   copying vermouth/data/mappings/martini3001/gly.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,099   copying vermouth/data/mappings/martini3001/hid.amber.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,101   copying vermouth/data/mappings/martini3001/hie.amber.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,103   copying vermouth/data/mappings/martini3001/hip.amber.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,105   copying vermouth/data/mappings/martini3001/his.amber.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,107   copying vermouth/data/mappings/martini3001/his.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,109   copying vermouth/data/mappings/martini3001/hsd.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,111   copying vermouth/data/mappings/martini3001/hse.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,114   copying vermouth/data/mappings/martini3001/hsp.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,117   copying vermouth/data/mappings/martini3001/ile.amber.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,119   copying vermouth/data/mappings/martini3001/ile.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,122   copying vermouth/data/mappings/martini3001/imia.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,125   copying vermouth/data/mappings/martini3001/inda.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,127   copying vermouth/data/mappings/martini3001/indo.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,129   copying vermouth/data/mappings/martini3001/leu.amber.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,132   copying vermouth/data/mappings/martini3001/leu.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,135   copying vermouth/data/mappings/martini3001/lsn.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,138   copying vermouth/data/mappings/martini3001/lyn.amber.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,140   copying vermouth/data/mappings/martini3001/lys.amber.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,143   copying vermouth/data/mappings/martini3001/lys.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,145   copying vermouth/data/mappings/martini3001/mboa.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,148   copying vermouth/data/mappings/martini3001/mcpe.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,150   copying vermouth/data/mappings/martini3001/meob.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,152   copying vermouth/data/mappings/martini3001/met.amber.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,155   copying vermouth/data/mappings/martini3001/met.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,157   copying vermouth/data/mappings/martini3001/mind.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,160   copying vermouth/data/mappings/martini3001/modifications.amber.mapping -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,163   copying vermouth/data/mappings/martini3001/modifications.charmm36.mapping -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,166   copying vermouth/data/mappings/martini3001/mxyl.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,168   copying vermouth/data/mappings/martini3001/naft.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,171   copying vermouth/data/mappings/martini3001/nitb.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,173   copying vermouth/data/mappings/martini3001/oxyl.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,176   copying vermouth/data/mappings/martini3001/pcro.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,178   copying vermouth/data/mappings/martini3001/phe.amber.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,181   copying vermouth/data/mappings/martini3001/phe.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,183   copying vermouth/data/mappings/martini3001/phen.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,186   copying vermouth/data/mappings/martini3001/phmk.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,188   copying vermouth/data/mappings/martini3001/prld.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,190   copying vermouth/data/mappings/martini3001/pro.amber.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,193   copying vermouth/data/mappings/martini3001/pro.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,195   copying vermouth/data/mappings/martini3001/pxyl.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,198   copying vermouth/data/mappings/martini3001/pyr1.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,201   copying vermouth/data/mappings/martini3001/pyrd.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,204   copying vermouth/data/mappings/martini3001/pyrl.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,206   copying vermouth/data/mappings/martini3001/pyrm.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,209   copying vermouth/data/mappings/martini3001/qinl.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,212   copying vermouth/data/mappings/martini3001/ser.amber.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,214   copying vermouth/data/mappings/martini3001/ser.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,216   copying vermouth/data/mappings/martini3001/sm139.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,218   copying vermouth/data/mappings/martini3001/styr.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,220   copying vermouth/data/mappings/martini3001/thaz.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,222   copying vermouth/data/mappings/martini3001/thf.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,224   copying vermouth/data/mappings/martini3001/thip.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,226   copying vermouth/data/mappings/martini3001/thp.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,228   copying vermouth/data/mappings/martini3001/thr.amber.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,230   copying vermouth/data/mappings/martini3001/thr.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,232   copying vermouth/data/mappings/martini3001/tolu.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,234   copying vermouth/data/mappings/martini3001/trp.amber.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,235   copying vermouth/data/mappings/martini3001/trp.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,237   copying vermouth/data/mappings/martini3001/tyr.amber.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,239   copying vermouth/data/mappings/martini3001/tyr.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,241   copying vermouth/data/mappings/martini3001/val.amber.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,243   copying vermouth/data/mappings/martini3001/val.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,246   copying vermouth/data/mappings/martini3001/zimi.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,248   copying vermouth/data/mappings/martini3001/zthp.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,250   copying vermouth/data/mappings/martini3001/zthz.charmm36.map -> build/lib/vermouth/data/mappings/martini3001
2023-09-29T23:59:21,252   creating build/lib/vermouth/data/mappings/martini30b32
2023-09-29T23:59:21,253   copying vermouth/data/mappings/martini30b32/ala.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32
2023-09-29T23:59:21,255   copying vermouth/data/mappings/martini30b32/arg.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32
2023-09-29T23:59:21,257   copying vermouth/data/mappings/martini30b32/asn.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32
2023-09-29T23:59:21,259   copying vermouth/data/mappings/martini30b32/asp.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32
2023-09-29T23:59:21,261   copying vermouth/data/mappings/martini30b32/benz.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32
2023-09-29T23:59:21,264   copying vermouth/data/mappings/martini30b32/cys.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32
2023-09-29T23:59:21,266   copying vermouth/data/mappings/martini30b32/gln.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32
2023-09-29T23:59:21,268   copying vermouth/data/mappings/martini30b32/glu.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32
2023-09-29T23:59:21,270   copying vermouth/data/mappings/martini30b32/gly.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32
2023-09-29T23:59:21,272   copying vermouth/data/mappings/martini30b32/his.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32
2023-09-29T23:59:21,275   copying vermouth/data/mappings/martini30b32/hsd.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32
2023-09-29T23:59:21,277   copying vermouth/data/mappings/martini30b32/ile.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32
2023-09-29T23:59:21,279   copying vermouth/data/mappings/martini30b32/leu.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32
2023-09-29T23:59:21,282   copying vermouth/data/mappings/martini30b32/lys.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32
2023-09-29T23:59:21,284   copying vermouth/data/mappings/martini30b32/met.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32
2023-09-29T23:59:21,287   copying vermouth/data/mappings/martini30b32/modifications.mapping -> build/lib/vermouth/data/mappings/martini30b32
2023-09-29T23:59:21,289   copying vermouth/data/mappings/martini30b32/phe.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32
2023-09-29T23:59:21,291   copying vermouth/data/mappings/martini30b32/pro.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32
2023-09-29T23:59:21,294   copying vermouth/data/mappings/martini30b32/ser.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32
2023-09-29T23:59:21,296   copying vermouth/data/mappings/martini30b32/thr.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32
2023-09-29T23:59:21,299   copying vermouth/data/mappings/martini30b32/trp.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32
2023-09-29T23:59:21,301   copying vermouth/data/mappings/martini30b32/tyr.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32
2023-09-29T23:59:21,304   copying vermouth/data/mappings/martini30b32/val.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32
2023-09-29T23:59:21,306   creating build/lib/vermouth/graphing
2023-09-29T23:59:21,307   copying vermouth/graphing/grappa.py -> build/lib/vermouth/graphing
2023-09-29T23:59:21,411   creating build/lib/vermouth/tests/data
2023-09-29T23:59:21,412   copying vermouth/tests/data/2QWO.pdb -> build/lib/vermouth/tests/data
2023-09-29T23:59:21,421   copying vermouth/tests/data/tri_alanine.pdb -> build/lib/vermouth/tests/data
2023-09-29T23:59:21,423   copying vermouth/tests/data/ala5_cg.pdb -> build/lib/vermouth/tests/data
2023-09-29T23:59:21,426   copying vermouth/tests/data/2dn2.pdb -> build/lib/vermouth/tests/data
2023-09-29T23:59:21,440   copying vermouth/tests/data/1bta.pdb -> build/lib/vermouth/tests/data
2023-09-29T23:59:21,446   copying vermouth/tests/data/heme.pdb -> build/lib/vermouth/tests/data
2023-09-29T23:59:21,448   copying vermouth/tests/data/1bta_mutated.pdb -> build/lib/vermouth/tests/data
2023-09-29T23:59:21,453   copying vermouth/tests/data/ala5.pdb -> build/lib/vermouth/tests/data
2023-09-29T23:59:21,456   copying vermouth/tests/data/6E8W.pdb -> build/lib/vermouth/tests/data
2023-09-29T23:59:21,509   copying vermouth/tests/data/dna-short.pdb -> build/lib/vermouth/tests/data
2023-09-29T23:59:21,512   creating build/lib/vermouth/tests/data/dssp_tests
2023-09-29T23:59:21,512   copying vermouth/tests/data/dssp_tests/dssp_1bta.ssd -> build/lib/vermouth/tests/data/dssp_tests
2023-09-29T23:59:21,515   copying vermouth/tests/data/dssp_tests/mini-protein2_helix.pdb.v3.0.0-3b1-deb_cv1.ssd -> build/lib/vermouth/tests/data/dssp_tests
2023-09-29T23:59:21,517   copying vermouth/tests/data/dssp_tests/mini-protein1_betasheet.pdb.v2.2.1-3b2-deb_cv1.ssd -> build/lib/vermouth/tests/data/dssp_tests
2023-09-29T23:59:21,519   copying vermouth/tests/data/dssp_tests/mini-protein1_betasheet.pdb.v3.0.0-3b1-deb_cv1.ssd -> build/lib/vermouth/tests/data/dssp_tests
2023-09-29T23:59:21,522   copying vermouth/tests/data/dssp_tests/mini-protein3_trp-cage.pdb.v3.0.0-3b1-deb_cv1.ssd -> build/lib/vermouth/tests/data/dssp_tests
2023-09-29T23:59:21,524   copying vermouth/tests/data/dssp_tests/mini-protein3_trp-cage.pdb.v2.2.1-3b2-deb_cv1.ssd -> build/lib/vermouth/tests/data/dssp_tests
2023-09-29T23:59:21,526   copying vermouth/tests/data/dssp_tests/mini-protein2_helix.pdb.v2.2.1-3b2-deb_cv1.ssd -> build/lib/vermouth/tests/data/dssp_tests
2023-09-29T23:59:21,529   creating build/lib/vermouth/tests/data/force_fields
2023-09-29T23:59:21,530   creating build/lib/vermouth/tests/data/force_fields/martini-test
2023-09-29T23:59:21,532   copying vermouth/tests/data/force_fields/martini-test/aminoacids.ff -> build/lib/vermouth/tests/data/force_fields/martini-test
2023-09-29T23:59:21,534   creating build/lib/vermouth/tests/data/force_fields/pepplane
2023-09-29T23:59:21,535   copying vermouth/tests/data/force_fields/pepplane/general.ff -> build/lib/vermouth/tests/data/force_fields/pepplane
2023-09-29T23:59:21,537   copying vermouth/tests/data/force_fields/pepplane/modifications.ff -> build/lib/vermouth/tests/data/force_fields/pepplane
2023-09-29T23:59:21,539   copying vermouth/tests/data/force_fields/pepplane/ala.ff -> build/lib/vermouth/tests/data/force_fields/pepplane
2023-09-29T23:59:21,541   creating build/lib/vermouth/tests/data/force_fields/universal-test
2023-09-29T23:59:21,542   copying vermouth/tests/data/force_fields/universal-test/aminoacids.rtp -> build/lib/vermouth/tests/data/force_fields/universal-test
2023-09-29T23:59:21,545   copying vermouth/tests/data/force_fields/universal-test/modifications.ff -> build/lib/vermouth/tests/data/force_fields/universal-test
2023-09-29T23:59:21,547   creating build/lib/vermouth/tests/data/integration_tests
2023-09-29T23:59:21,547   creating build/lib/vermouth/tests/data/integration_tests/tier-1
2023-09-29T23:59:21,548   creating build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme
2023-09-29T23:59:21,549   copying vermouth/tests/data/integration_tests/tier-1/lysozyme/README -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme
2023-09-29T23:59:21,551   copying vermouth/tests/data/integration_tests/tier-1/lysozyme/aa.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme
2023-09-29T23:59:21,556   creating build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2
2023-09-29T23:59:21,557   copying vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/command -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2
2023-09-29T23:59:21,559   copying vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/cg.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2
2023-09-29T23:59:21,562   copying vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/screen.output -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2
2023-09-29T23:59:21,565   copying vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/chain_A.ssd -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2
2023-09-29T23:59:21,568   copying vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/test.itp -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2
2023-09-29T23:59:21,571   copying vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/topol.top -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2
2023-09-29T23:59:21,573   copying vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/citation -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2
2023-09-29T23:59:21,575   copying vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/molecule_0.itp -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2
2023-09-29T23:59:21,578   creating build/lib/vermouth/tests/data/integration_tests/tier-1/bpti
2023-09-29T23:59:21,579   copying vermouth/tests/data/integration_tests/tier-1/bpti/README -> build/lib/vermouth/tests/data/integration_tests/tier-1/bpti
2023-09-29T23:59:21,581   copying vermouth/tests/data/integration_tests/tier-1/bpti/aa.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/bpti
2023-09-29T23:59:21,584   creating build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2
2023-09-29T23:59:21,585   copying vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/command -> build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2
2023-09-29T23:59:21,587   copying vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/cg.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2
2023-09-29T23:59:21,589   copying vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/screen.output -> build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2
2023-09-29T23:59:21,592   copying vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/chain_A.ssd -> build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2
2023-09-29T23:59:21,595   copying vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/topol.top -> build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2
2023-09-29T23:59:21,597   copying vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/citation -> build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2
2023-09-29T23:59:21,599   copying vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/molecule_0.itp -> build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2
2023-09-29T23:59:21,602   creating build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region
2023-09-29T23:59:21,603   copying vermouth/tests/data/integration_tests/tier-1/EN_region/README -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region
2023-09-29T23:59:21,605   copying vermouth/tests/data/integration_tests/tier-1/EN_region/aa.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region
2023-09-29T23:59:21,608   creating build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2
2023-09-29T23:59:21,609   copying vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/command -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2
2023-09-29T23:59:21,612   copying vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/cg.top -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2
2023-09-29T23:59:21,614   copying vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/cg.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2
2023-09-29T23:59:21,616   copying vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/screen.output -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2
2023-09-29T23:59:21,618   copying vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/chain_A.ssd -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2
2023-09-29T23:59:21,621   copying vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/citation -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2
2023-09-29T23:59:21,623   copying vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/molecule_0.itp -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2
2023-09-29T23:59:21,626   creating build/lib/vermouth/tests/data/integration_tests/tier-1/3i40
2023-09-29T23:59:21,626   copying vermouth/tests/data/integration_tests/tier-1/3i40/3i40.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/3i40
2023-09-29T23:59:21,630   copying vermouth/tests/data/integration_tests/tier-1/3i40/README -> build/lib/vermouth/tests/data/integration_tests/tier-1/3i40
2023-09-29T23:59:21,632   creating build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2
2023-09-29T23:59:21,633   copying vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/command -> build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2
2023-09-29T23:59:21,635   copying vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/cg.top -> build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2
2023-09-29T23:59:21,636   copying vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/cg.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2
2023-09-29T23:59:21,639   copying vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/screen.output -> build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2
2023-09-29T23:59:21,641   copying vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/chain_C.ssd -> build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2
2023-09-29T23:59:21,644   copying vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/chain_A.ssd -> build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2
2023-09-29T23:59:21,646   copying vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/insulin_dimer.itp -> build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2
2023-09-29T23:59:21,649   copying vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/citation -> build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2
2023-09-29T23:59:21,651   copying vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/molecule_0.itp -> build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2
2023-09-29T23:59:21,654   creating build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot
2023-09-29T23:59:21,655   copying vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/cg.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot
2023-09-29T23:59:21,658   copying vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/chain_A.ssd -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot
2023-09-29T23:59:21,660   copying vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/topol.top -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot
2023-09-29T23:59:21,662   copying vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/README -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot
2023-09-29T23:59:21,664   copying vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/aa.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot
2023-09-29T23:59:21,669   copying vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/molecule_0.itp -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot
2023-09-29T23:59:21,672   creating build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2
2023-09-29T23:59:21,673   copying vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/command -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2
2023-09-29T23:59:21,675   copying vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/cg.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2
2023-09-29T23:59:21,678   copying vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/screen.output -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2
2023-09-29T23:59:21,680   copying vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/chain_A.ssd -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2
2023-09-29T23:59:21,683   copying vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/test.itp -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2
2023-09-29T23:59:21,686   copying vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/topol.top -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2
2023-09-29T23:59:21,687   copying vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/citation -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2
2023-09-29T23:59:21,689   copying vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/molecule_0.itp -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2
2023-09-29T23:59:21,692   creating build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain
2023-09-29T23:59:21,693   copying vermouth/tests/data/integration_tests/tier-1/EN_chain/README -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain
2023-09-29T23:59:21,695   copying vermouth/tests/data/integration_tests/tier-1/EN_chain/aa.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain
2023-09-29T23:59:21,699   creating build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2
2023-09-29T23:59:21,699   copying vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/command -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2
2023-09-29T23:59:21,702   copying vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/cg.top -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2
2023-09-29T23:59:21,704   copying vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/cg.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2
2023-09-29T23:59:21,707   copying vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/screen.output -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2
2023-09-29T23:59:21,709   copying vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/chain_A.ssd -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2
2023-09-29T23:59:21,711   copying vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/citation -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2
2023-09-29T23:59:21,714   copying vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/molecule_0.itp -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2
2023-09-29T23:59:21,716   creating build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5
2023-09-29T23:59:21,717   copying vermouth/tests/data/integration_tests/tier-1/1mj5/README -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5
2023-09-29T23:59:21,719   copying vermouth/tests/data/integration_tests/tier-1/1mj5/aa.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5
2023-09-29T23:59:21,728   creating build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2
2023-09-29T23:59:21,728   copying vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/command -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2
2023-09-29T23:59:21,731   copying vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/cg.top -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2
2023-09-29T23:59:21,733   copying vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/cg.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2
2023-09-29T23:59:21,736   copying vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/screen.output -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2
2023-09-29T23:59:21,738   copying vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/citation -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2
2023-09-29T23:59:21,740   copying vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/chain_.ssd -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2
2023-09-29T23:59:21,744   copying vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/molecule_0.itp -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2
2023-09-29T23:59:21,748   creating build/lib/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm
2023-09-29T23:59:21,749   copying vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/input.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm
2023-09-29T23:59:21,754   copying vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/README -> build/lib/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm
2023-09-29T23:59:21,756   creating build/lib/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2
2023-09-29T23:59:21,757   copying vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2/command -> build/lib/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2
2023-09-29T23:59:21,759   copying vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2/cg.top -> build/lib/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2
2023-09-29T23:59:21,762   copying vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2/cg.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2
2023-09-29T23:59:21,764   copying vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2/screen.output -> build/lib/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2
2023-09-29T23:59:21,767   copying vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2/sys.top -> build/lib/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2
2023-09-29T23:59:21,769   copying vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2/citation -> build/lib/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2
2023-09-29T23:59:21,771   copying vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2/chain_.ssd -> build/lib/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2
2023-09-29T23:59:21,774   copying vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2/molecule_0.itp -> build/lib/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2
2023-09-29T23:59:21,777   creating build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap
2023-09-29T23:59:21,778   copying vermouth/tests/data/integration_tests/tier-1/6LFO_gap/README -> build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap
2023-09-29T23:59:21,780   copying vermouth/tests/data/integration_tests/tier-1/6LFO_gap/6LFO_gap.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap
2023-09-29T23:59:21,785   creating build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2
2023-09-29T23:59:21,786   copying vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/command -> build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2
2023-09-29T23:59:21,788   copying vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/cg.top -> build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2
2023-09-29T23:59:21,790   copying vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/cg.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2
2023-09-29T23:59:21,793   copying vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/screen.output -> build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2
2023-09-29T23:59:21,796   copying vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/chain_R.ssd -> build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2
2023-09-29T23:59:21,798   copying vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/citation -> build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2
2023-09-29T23:59:21,800   copying vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/molecule_0.itp -> build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2
2023-09-29T23:59:21,804   creating build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm
2023-09-29T23:59:21,805   copying vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/README -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm
2023-09-29T23:59:21,807   copying vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/aa.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm
2023-09-29T23:59:21,815   creating build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2
2023-09-29T23:59:21,815   copying vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/command -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2
2023-09-29T23:59:21,817   copying vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/cg.top -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2
2023-09-29T23:59:21,819   copying vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/cg.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2
2023-09-29T23:59:21,823   copying vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/screen.output -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2
2023-09-29T23:59:21,825   copying vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/citation -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2
2023-09-29T23:59:21,827   copying vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/chain_.ssd -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2
2023-09-29T23:59:21,831   copying vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/molecule_0.itp -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2
2023-09-29T23:59:21,836   creating build/lib/vermouth/tests/data/integration_tests/tier-1/villin
2023-09-29T23:59:21,837   copying vermouth/tests/data/integration_tests/tier-1/villin/README -> build/lib/vermouth/tests/data/integration_tests/tier-1/villin
2023-09-29T23:59:21,839   copying vermouth/tests/data/integration_tests/tier-1/villin/aa.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/villin
2023-09-29T23:59:21,842   creating build/lib/vermouth/tests/data/integration_tests/tier-1/villin/martinize2
2023-09-29T23:59:21,843   copying vermouth/tests/data/integration_tests/tier-1/villin/martinize2/command -> build/lib/vermouth/tests/data/integration_tests/tier-1/villin/martinize2
2023-09-29T23:59:21,845   copying vermouth/tests/data/integration_tests/tier-1/villin/martinize2/cg.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/villin/martinize2
2023-09-29T23:59:21,849   copying vermouth/tests/data/integration_tests/tier-1/villin/martinize2/screen.output -> build/lib/vermouth/tests/data/integration_tests/tier-1/villin/martinize2
2023-09-29T23:59:21,851   copying vermouth/tests/data/integration_tests/tier-1/villin/martinize2/topol.top -> build/lib/vermouth/tests/data/integration_tests/tier-1/villin/martinize2
2023-09-29T23:59:21,854   copying vermouth/tests/data/integration_tests/tier-1/villin/martinize2/citation -> build/lib/vermouth/tests/data/integration_tests/tier-1/villin/martinize2
2023-09-29T23:59:21,857   copying vermouth/tests/data/integration_tests/tier-1/villin/martinize2/molecule_0.itp -> build/lib/vermouth/tests/data/integration_tests/tier-1/villin/martinize2
2023-09-29T23:59:21,861   creating build/lib/vermouth/tests/data/integration_tests/tier-0
2023-09-29T23:59:21,862   creating build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet
2023-09-29T23:59:21,864   copying vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/README -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet
2023-09-29T23:59:21,867   copying vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/aa.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet
2023-09-29T23:59:21,869   creating build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2
2023-09-29T23:59:21,870   copying vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/command -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2
2023-09-29T23:59:21,872   copying vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/cg.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2
2023-09-29T23:59:21,874   copying vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/screen.output -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2
2023-09-29T23:59:21,876   copying vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/chain_A.ssd -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2
2023-09-29T23:59:21,879   copying vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/topol.top -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2
2023-09-29T23:59:21,881   copying vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/citation -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2
2023-09-29T23:59:21,883   copying vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/molecule_0.itp -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2
2023-09-29T23:59:21,885   creating build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix
2023-09-29T23:59:21,886   copying vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/README -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix
2023-09-29T23:59:21,889   copying vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/aa.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix
2023-09-29T23:59:21,892   creating build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2
2023-09-29T23:59:21,893   copying vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/command -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2
2023-09-29T23:59:21,895   copying vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/cg.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2
2023-09-29T23:59:21,898   copying vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/screen.output -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2
2023-09-29T23:59:21,900   copying vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/chain_A.ssd -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2
2023-09-29T23:59:21,902   copying vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/topol.top -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2
2023-09-29T23:59:21,904   copying vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/citation -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2
2023-09-29T23:59:21,906   copying vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/molecule_0.itp -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2
2023-09-29T23:59:21,909   creating build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage
2023-09-29T23:59:21,910   copying vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/README -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage
2023-09-29T23:59:21,912   copying vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/aa.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage
2023-09-29T23:59:21,915   creating build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2
2023-09-29T23:59:21,916   copying vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/command -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2
2023-09-29T23:59:21,919   copying vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/cg.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2
2023-09-29T23:59:21,922   copying vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/screen.output -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2
2023-09-29T23:59:21,924   copying vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/chain_A.ssd -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2
2023-09-29T23:59:21,927   copying vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/topol.top -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2
2023-09-29T23:59:21,930   copying vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/citation -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2
2023-09-29T23:59:21,932   copying vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/molecule_0.itp -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2
2023-09-29T23:59:21,935   creating build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini
2023-09-29T23:59:21,936   copying vermouth/tests/data/integration_tests/tier-0/dipro-termini/README -> build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini
2023-09-29T23:59:21,939   copying vermouth/tests/data/integration_tests/tier-0/dipro-termini/aa.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini
2023-09-29T23:59:21,942   creating build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2
2023-09-29T23:59:21,943   copying vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2/command -> build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2
2023-09-29T23:59:21,946   copying vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2/cg.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2
2023-09-29T23:59:21,949   copying vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2/topol.top -> build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2
2023-09-29T23:59:21,951   copying vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2/citation -> build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2
2023-09-29T23:59:21,953   copying vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2/molecule_0.itp -> build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2
2023-09-29T23:59:21,956   creating build/lib/vermouth/tests/data/mappings
2023-09-29T23:59:21,956   creating build/lib/vermouth/tests/data/mappings/universal-test
2023-09-29T23:59:21,957   creating build/lib/vermouth/tests/data/mappings/universal-test/martini-test
2023-09-29T23:59:21,958   copying vermouth/tests/data/mappings/universal-test/martini-test/ser.mapping -> build/lib/vermouth/tests/data/mappings/universal-test/martini-test
2023-09-29T23:59:21,961   creating build/lib/vermouth/tests/data/mappings/universal-test/pepplane
2023-09-29T23:59:21,962   copying vermouth/tests/data/mappings/universal-test/pepplane/modifications.mapping -> build/lib/vermouth/tests/data/mappings/universal-test/pepplane
2023-09-29T23:59:21,964   copying vermouth/tests/data/mappings/universal-test/pepplane/ala.mapping -> build/lib/vermouth/tests/data/mappings/universal-test/pepplane
2023-09-29T23:59:22,036   creating build/lib/vermouth/tests/gmx
2023-09-29T23:59:22,037   copying vermouth/tests/gmx/test_gro.py -> build/lib/vermouth/tests/gmx
2023-09-29T23:59:22,040   copying vermouth/tests/gmx/test_itp.py -> build/lib/vermouth/tests/gmx
2023-09-29T23:59:22,042   creating build/lib/vermouth/tests/pdb
2023-09-29T23:59:22,043   copying vermouth/tests/pdb/test_read_pdb.py -> build/lib/vermouth/tests/pdb
2023-09-29T23:59:22,047   copying vermouth/tests/pdb/test_write_pdb.py -> build/lib/vermouth/tests/pdb
2023-09-29T23:59:22,057   running build_scripts
2023-09-29T23:59:22,057   creating build/scripts-3.11
2023-09-29T23:59:22,058   copying and adjusting bin/martinize2 -> build/scripts-3.11
2023-09-29T23:59:22,062   changing mode of build/scripts-3.11/martinize2 from 644 to 755
2023-09-29T23:59:22,062   installing to build/bdist.linux-armv7l/wheel
2023-09-29T23:59:22,063   running install
2023-09-29T23:59:22,099   [pbr] Generating AUTHORS
2023-09-29T23:59:22,106   [pbr] AUTHORS complete (0.0s)
2023-09-29T23:59:22,106   running install_lib
2023-09-29T23:59:22,114   creating build/bdist.linux-armv7l
2023-09-29T23:59:22,115   creating build/bdist.linux-armv7l/wheel
2023-09-29T23:59:22,117   creating build/bdist.linux-armv7l/wheel/vermouth
2023-09-29T23:59:22,119   creating build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,120   copying build/lib/vermouth/tests/test_make_bonds.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,123   copying build/lib/vermouth/tests/test_molecule.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,126   copying build/lib/vermouth/tests/test_selectors.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,128   copying build/lib/vermouth/tests/test_set_molecule_meta.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,130   copying build/lib/vermouth/tests/test_repair_graph.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,133   creating build/bdist.linux-armv7l/wheel/vermouth/tests/gmx
2023-09-29T23:59:22,134   copying build/lib/vermouth/tests/gmx/test_gro.py -> build/bdist.linux-armv7l/wheel/vermouth/tests/gmx
2023-09-29T23:59:22,137   copying build/lib/vermouth/tests/gmx/test_itp.py -> build/bdist.linux-armv7l/wheel/vermouth/tests/gmx
2023-09-29T23:59:22,139   copying build/lib/vermouth/tests/datafiles.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,141   copying build/lib/vermouth/tests/test_graph_utils.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,143   copying build/lib/vermouth/tests/test_ff_files.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,146   copying build/lib/vermouth/tests/test_do_mapping.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,149   copying build/lib/vermouth/tests/test_sort_molecule_atoms.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,151   copying build/lib/vermouth/tests/test_links.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,153   copying build/lib/vermouth/tests/test_file_writer.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,155   copying build/lib/vermouth/tests/test_apply_rubber_band.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,158   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data
2023-09-29T23:59:22,159   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/dssp_tests
2023-09-29T23:59:22,160   copying build/lib/vermouth/tests/data/dssp_tests/dssp_1bta.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/dssp_tests
2023-09-29T23:59:22,163   copying build/lib/vermouth/tests/data/dssp_tests/mini-protein2_helix.pdb.v3.0.0-3b1-deb_cv1.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/dssp_tests
2023-09-29T23:59:22,165   copying build/lib/vermouth/tests/data/dssp_tests/mini-protein1_betasheet.pdb.v2.2.1-3b2-deb_cv1.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/dssp_tests
2023-09-29T23:59:22,167   copying build/lib/vermouth/tests/data/dssp_tests/mini-protein1_betasheet.pdb.v3.0.0-3b1-deb_cv1.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/dssp_tests
2023-09-29T23:59:22,170   copying build/lib/vermouth/tests/data/dssp_tests/mini-protein3_trp-cage.pdb.v3.0.0-3b1-deb_cv1.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/dssp_tests
2023-09-29T23:59:22,172   copying build/lib/vermouth/tests/data/dssp_tests/mini-protein3_trp-cage.pdb.v2.2.1-3b2-deb_cv1.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/dssp_tests
2023-09-29T23:59:22,175   copying build/lib/vermouth/tests/data/dssp_tests/mini-protein2_helix.pdb.v2.2.1-3b2-deb_cv1.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/dssp_tests
2023-09-29T23:59:22,177   copying build/lib/vermouth/tests/data/2QWO.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data
2023-09-29T23:59:22,185   copying build/lib/vermouth/tests/data/tri_alanine.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data
2023-09-29T23:59:22,187   copying build/lib/vermouth/tests/data/ala5_cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data
2023-09-29T23:59:22,188   copying build/lib/vermouth/tests/data/2dn2.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data
2023-09-29T23:59:22,202   copying build/lib/vermouth/tests/data/1bta.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data
2023-09-29T23:59:22,207   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/force_fields
2023-09-29T23:59:22,208   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/force_fields/martini-test
2023-09-29T23:59:22,210   copying build/lib/vermouth/tests/data/force_fields/martini-test/aminoacids.ff -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/force_fields/martini-test
2023-09-29T23:59:22,213   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/force_fields/pepplane
2023-09-29T23:59:22,214   copying build/lib/vermouth/tests/data/force_fields/pepplane/general.ff -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/force_fields/pepplane
2023-09-29T23:59:22,216   copying build/lib/vermouth/tests/data/force_fields/pepplane/modifications.ff -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/force_fields/pepplane
2023-09-29T23:59:22,218   copying build/lib/vermouth/tests/data/force_fields/pepplane/ala.ff -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/force_fields/pepplane
2023-09-29T23:59:22,220   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/force_fields/universal-test
2023-09-29T23:59:22,221   copying build/lib/vermouth/tests/data/force_fields/universal-test/aminoacids.rtp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/force_fields/universal-test
2023-09-29T23:59:22,225   copying build/lib/vermouth/tests/data/force_fields/universal-test/modifications.ff -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/force_fields/universal-test
2023-09-29T23:59:22,227   copying build/lib/vermouth/tests/data/heme.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data
2023-09-29T23:59:22,229   copying build/lib/vermouth/tests/data/1bta_mutated.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data
2023-09-29T23:59:22,234   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests
2023-09-29T23:59:22,235   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1
2023-09-29T23:59:22,236   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme
2023-09-29T23:59:22,237   copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/README -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme
2023-09-29T23:59:22,239   copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/aa.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme
2023-09-29T23:59:22,243   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2
2023-09-29T23:59:22,244   copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/command -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2
2023-09-29T23:59:22,246   copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2
2023-09-29T23:59:22,248   copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/screen.output -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2
2023-09-29T23:59:22,251   copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/chain_A.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2
2023-09-29T23:59:22,254   copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/test.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2
2023-09-29T23:59:22,257   copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/topol.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2
2023-09-29T23:59:22,258   copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/citation -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2
2023-09-29T23:59:22,260   copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/molecule_0.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2
2023-09-29T23:59:22,264   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/bpti
2023-09-29T23:59:22,264   copying build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/README -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/bpti
2023-09-29T23:59:22,266   copying build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/aa.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/bpti
2023-09-29T23:59:22,270   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2
2023-09-29T23:59:22,271   copying build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/command -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2
2023-09-29T23:59:22,273   copying build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2
2023-09-29T23:59:22,276   copying build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/screen.output -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2
2023-09-29T23:59:22,278   copying build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/chain_A.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2
2023-09-29T23:59:22,281   copying build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/topol.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2
2023-09-29T23:59:22,283   copying build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/citation -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2
2023-09-29T23:59:22,284   copying build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/molecule_0.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2
2023-09-29T23:59:22,287   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_region
2023-09-29T23:59:22,288   copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/README -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_region
2023-09-29T23:59:22,290   copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/aa.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_region
2023-09-29T23:59:22,294   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2
2023-09-29T23:59:22,295   copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/command -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2
2023-09-29T23:59:22,297   copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/cg.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2
2023-09-29T23:59:22,299   copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2
2023-09-29T23:59:22,301   copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/screen.output -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2
2023-09-29T23:59:22,303   copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/chain_A.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2
2023-09-29T23:59:22,306   copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/citation -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2
2023-09-29T23:59:22,308   copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/molecule_0.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2
2023-09-29T23:59:22,311   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/3i40
2023-09-29T23:59:22,312   copying build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/3i40.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/3i40
2023-09-29T23:59:22,315   copying build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/README -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/3i40
2023-09-29T23:59:22,317   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2
2023-09-29T23:59:22,318   copying build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/command -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2
2023-09-29T23:59:22,320   copying build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/cg.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2
2023-09-29T23:59:22,322   copying build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2
2023-09-29T23:59:22,324   copying build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/screen.output -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2
2023-09-29T23:59:22,326   copying build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/chain_C.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2
2023-09-29T23:59:22,328   copying build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/chain_A.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2
2023-09-29T23:59:22,331   copying build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/insulin_dimer.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2
2023-09-29T23:59:22,333   copying build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/citation -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2
2023-09-29T23:59:22,335   copying build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/molecule_0.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2
2023-09-29T23:59:22,338   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot
2023-09-29T23:59:22,339   copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot
2023-09-29T23:59:22,341   copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/chain_A.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot
2023-09-29T23:59:22,344   copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/topol.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot
2023-09-29T23:59:22,346   copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/README -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot
2023-09-29T23:59:22,347   copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/aa.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot
2023-09-29T23:59:22,351   copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/molecule_0.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot
2023-09-29T23:59:22,355   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2
2023-09-29T23:59:22,356   copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/command -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2
2023-09-29T23:59:22,359   copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2
2023-09-29T23:59:22,361   copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/screen.output -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2
2023-09-29T23:59:22,364   copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/chain_A.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2
2023-09-29T23:59:22,366   copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/test.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2
2023-09-29T23:59:22,369   copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/topol.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2
2023-09-29T23:59:22,371   copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/citation -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2
2023-09-29T23:59:22,373   copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/molecule_0.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2
2023-09-29T23:59:22,377   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_chain
2023-09-29T23:59:22,378   copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/README -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_chain
2023-09-29T23:59:22,380   copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/aa.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_chain
2023-09-29T23:59:22,384   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2
2023-09-29T23:59:22,385   copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/command -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2
2023-09-29T23:59:22,387   copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/cg.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2
2023-09-29T23:59:22,389   copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2
2023-09-29T23:59:22,391   copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/screen.output -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2
2023-09-29T23:59:22,394   copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/chain_A.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2
2023-09-29T23:59:22,396   copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/citation -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2
2023-09-29T23:59:22,398   copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/molecule_0.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2
2023-09-29T23:59:22,401   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5
2023-09-29T23:59:22,402   copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/README -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5
2023-09-29T23:59:22,404   copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/aa.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5
2023-09-29T23:59:22,412   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2
2023-09-29T23:59:22,413   copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/command -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2
2023-09-29T23:59:22,415   copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/cg.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2
2023-09-29T23:59:22,417   copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2
2023-09-29T23:59:22,420   copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/screen.output -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2
2023-09-29T23:59:22,421   copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/citation -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2
2023-09-29T23:59:22,423   copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/chain_.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2
2023-09-29T23:59:22,426   copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/molecule_0.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2
2023-09-29T23:59:22,431   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm
2023-09-29T23:59:22,432   copying build/lib/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/input.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm
2023-09-29T23:59:22,438   copying build/lib/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/README -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm
2023-09-29T23:59:22,441   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2
2023-09-29T23:59:22,442   copying build/lib/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2/command -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2
2023-09-29T23:59:22,444   copying build/lib/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2/cg.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2
2023-09-29T23:59:22,447   copying build/lib/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2/cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2
2023-09-29T23:59:22,451   copying build/lib/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2/screen.output -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2
2023-09-29T23:59:22,453   copying build/lib/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2/sys.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2
2023-09-29T23:59:22,455   copying build/lib/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2/citation -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2
2023-09-29T23:59:22,457   copying build/lib/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2/chain_.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2
2023-09-29T23:59:22,459   copying build/lib/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2/molecule_0.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2
2023-09-29T23:59:22,463   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/6LFO_gap
2023-09-29T23:59:22,464   copying build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/README -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/6LFO_gap
2023-09-29T23:59:22,467   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2
2023-09-29T23:59:22,468   copying build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/command -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2
2023-09-29T23:59:22,470   copying build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/cg.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2
2023-09-29T23:59:22,472   copying build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2
2023-09-29T23:59:22,476   copying build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/screen.output -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2
2023-09-29T23:59:22,478   copying build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/chain_R.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2
2023-09-29T23:59:22,481   copying build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/citation -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2
2023-09-29T23:59:22,482   copying build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/molecule_0.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2
2023-09-29T23:59:22,486   copying build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/6LFO_gap.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/6LFO_gap
2023-09-29T23:59:22,491   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm
2023-09-29T23:59:22,491   copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/README -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm
2023-09-29T23:59:22,493   copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/aa.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm
2023-09-29T23:59:22,503   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2
2023-09-29T23:59:22,503   copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/command -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2
2023-09-29T23:59:22,505   copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/cg.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2
2023-09-29T23:59:22,507   copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2
2023-09-29T23:59:22,511   copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/screen.output -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2
2023-09-29T23:59:22,513   copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/citation -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2
2023-09-29T23:59:22,515   copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/chain_.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2
2023-09-29T23:59:22,518   copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/molecule_0.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2
2023-09-29T23:59:22,524   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/villin
2023-09-29T23:59:22,525   copying build/lib/vermouth/tests/data/integration_tests/tier-1/villin/README -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/villin
2023-09-29T23:59:22,527   copying build/lib/vermouth/tests/data/integration_tests/tier-1/villin/aa.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/villin
2023-09-29T23:59:22,530   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/villin/martinize2
2023-09-29T23:59:22,531   copying build/lib/vermouth/tests/data/integration_tests/tier-1/villin/martinize2/command -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/villin/martinize2
2023-09-29T23:59:22,533   copying build/lib/vermouth/tests/data/integration_tests/tier-1/villin/martinize2/cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/villin/martinize2
2023-09-29T23:59:22,535   copying build/lib/vermouth/tests/data/integration_tests/tier-1/villin/martinize2/screen.output -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/villin/martinize2
2023-09-29T23:59:22,537   copying build/lib/vermouth/tests/data/integration_tests/tier-1/villin/martinize2/topol.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/villin/martinize2
2023-09-29T23:59:22,539   copying build/lib/vermouth/tests/data/integration_tests/tier-1/villin/martinize2/citation -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/villin/martinize2
2023-09-29T23:59:22,541   copying build/lib/vermouth/tests/data/integration_tests/tier-1/villin/martinize2/molecule_0.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/villin/martinize2
2023-09-29T23:59:22,544   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0
2023-09-29T23:59:22,545   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet
2023-09-29T23:59:22,546   copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/README -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet
2023-09-29T23:59:22,548   copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/aa.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet
2023-09-29T23:59:22,552   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2
2023-09-29T23:59:22,553   copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/command -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2
2023-09-29T23:59:22,555   copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2
2023-09-29T23:59:22,557   copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/screen.output -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2
2023-09-29T23:59:22,559   copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/chain_A.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2
2023-09-29T23:59:22,562   copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/topol.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2
2023-09-29T23:59:22,563   copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/citation -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2
2023-09-29T23:59:22,565   copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/molecule_0.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2
2023-09-29T23:59:22,568   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix
2023-09-29T23:59:22,569   copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/README -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix
2023-09-29T23:59:22,571   copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/aa.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix
2023-09-29T23:59:22,574   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2
2023-09-29T23:59:22,575   copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/command -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2
2023-09-29T23:59:22,577   copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2
2023-09-29T23:59:22,579   copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/screen.output -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2
2023-09-29T23:59:22,581   copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/chain_A.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2
2023-09-29T23:59:22,584   copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/topol.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2
2023-09-29T23:59:22,585   copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/citation -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2
2023-09-29T23:59:22,587   copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/molecule_0.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2
2023-09-29T23:59:22,590   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage
2023-09-29T23:59:22,591   copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/README -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage
2023-09-29T23:59:22,593   copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/aa.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage
2023-09-29T23:59:22,596   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2
2023-09-29T23:59:22,597   copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/command -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2
2023-09-29T23:59:22,599   copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2
2023-09-29T23:59:22,602   copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/screen.output -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2
2023-09-29T23:59:22,604   copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/chain_A.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2
2023-09-29T23:59:22,606   copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/topol.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2
2023-09-29T23:59:22,608   copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/citation -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2
2023-09-29T23:59:22,610   copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/molecule_0.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2
2023-09-29T23:59:22,612   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/dipro-termini
2023-09-29T23:59:22,613   copying build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini/README -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/dipro-termini
2023-09-29T23:59:22,615   copying build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini/aa.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/dipro-termini
2023-09-29T23:59:22,618   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2
2023-09-29T23:59:22,619   copying build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2/command -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2
2023-09-29T23:59:22,621   copying build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2/cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2
2023-09-29T23:59:22,623   copying build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2/topol.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2
2023-09-29T23:59:22,625   copying build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2/citation -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2
2023-09-29T23:59:22,627   copying build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2/molecule_0.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2
2023-09-29T23:59:22,629   copying build/lib/vermouth/tests/data/ala5.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data
2023-09-29T23:59:22,631   copying build/lib/vermouth/tests/data/6E8W.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data
2023-09-29T23:59:22,680   copying build/lib/vermouth/tests/data/dna-short.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data
2023-09-29T23:59:22,682   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/mappings
2023-09-29T23:59:22,684   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/mappings/universal-test
2023-09-29T23:59:22,685   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/mappings/universal-test/martini-test
2023-09-29T23:59:22,686   copying build/lib/vermouth/tests/data/mappings/universal-test/martini-test/ser.mapping -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/mappings/universal-test/martini-test
2023-09-29T23:59:22,688   creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/mappings/universal-test/pepplane
2023-09-29T23:59:22,689   copying build/lib/vermouth/tests/data/mappings/universal-test/pepplane/modifications.mapping -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/mappings/universal-test/pepplane
2023-09-29T23:59:22,691   copying build/lib/vermouth/tests/data/mappings/universal-test/pepplane/ala.mapping -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/mappings/universal-test/pepplane
2023-09-29T23:59:22,693   copying build/lib/vermouth/tests/test_go_vs_includes.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,695   copying build/lib/vermouth/tests/molecule_strategies.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,698   copying build/lib/vermouth/tests/test_utils.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,700   copying build/lib/vermouth/tests/test_map_input.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,703   copying build/lib/vermouth/tests/test_annotate_mut_mod.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,705   copying build/lib/vermouth/tests/test_ptm_detection.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,707   copying build/lib/vermouth/tests/test_edge_tuning.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,710   creating build/bdist.linux-armv7l/wheel/vermouth/tests/integration_tests
2023-09-29T23:59:22,711   copying build/lib/vermouth/tests/integration_tests/test_integration.py -> build/bdist.linux-armv7l/wheel/vermouth/tests/integration_tests
2023-09-29T23:59:22,713   copying build/lib/vermouth/tests/integration_tests/__init__.py -> build/bdist.linux-armv7l/wheel/vermouth/tests/integration_tests
2023-09-29T23:59:22,715   copying build/lib/vermouth/tests/helper_functions.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,717   copying build/lib/vermouth/tests/test_dssp.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,720   copying build/lib/vermouth/tests/test_ismags.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,722   copying build/lib/vermouth/tests/test_native_forcefield.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,725   copying build/lib/vermouth/tests/test_itp_files.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,728   copying build/lib/vermouth/tests/test_tune_cystein_bridges.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,730   copying build/lib/vermouth/tests/test_section_parser.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,733   copying build/lib/vermouth/tests/test_add_molecule_edges.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,735   copying build/lib/vermouth/tests/test_name_moltype.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,738   copying build/lib/vermouth/tests/test_geometry.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,741   copying build/lib/vermouth/tests/test_forcefield.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,743   copying build/lib/vermouth/tests/test_version.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,745   copying build/lib/vermouth/tests/test_grappa.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,748   copying build/lib/vermouth/tests/test_logging.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,751   copying build/lib/vermouth/tests/__init__.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,754   creating build/bdist.linux-armv7l/wheel/vermouth/tests/pdb
2023-09-29T23:59:22,755   copying build/lib/vermouth/tests/pdb/test_read_pdb.py -> build/bdist.linux-armv7l/wheel/vermouth/tests/pdb
2023-09-29T23:59:22,758   copying build/lib/vermouth/tests/pdb/test_write_pdb.py -> build/bdist.linux-armv7l/wheel/vermouth/tests/pdb
2023-09-29T23:59:22,760   copying build/lib/vermouth/tests/test_map_parser.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,764   copying build/lib/vermouth/tests/test_average_beads.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,766   copying build/lib/vermouth/tests/test_ffinput.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,769   copying build/lib/vermouth/tests/test_mapping_integrative.py -> build/bdist.linux-armv7l/wheel/vermouth/tests
2023-09-29T23:59:22,772   copying build/lib/vermouth/ismags.py -> build/bdist.linux-armv7l/wheel/vermouth
2023-09-29T23:59:22,776   copying build/lib/vermouth/parser_utils.py -> build/bdist.linux-armv7l/wheel/vermouth
2023-09-29T23:59:22,779   copying build/lib/vermouth/molecule.py -> build/bdist.linux-armv7l/wheel/vermouth
2023-09-29T23:59:22,782   copying build/lib/vermouth/system.py -> build/bdist.linux-armv7l/wheel/vermouth
2023-09-29T23:59:22,785   creating build/bdist.linux-armv7l/wheel/vermouth/gmx
2023-09-29T23:59:22,786   copying build/lib/vermouth/gmx/rtp.py -> build/bdist.linux-armv7l/wheel/vermouth/gmx
2023-09-29T23:59:22,789   copying build/lib/vermouth/gmx/itp_read.py -> build/bdist.linux-armv7l/wheel/vermouth/gmx
2023-09-29T23:59:22,792   copying build/lib/vermouth/gmx/itp.py -> build/bdist.linux-armv7l/wheel/vermouth/gmx
2023-09-29T23:59:22,795   copying build/lib/vermouth/gmx/__init__.py -> build/bdist.linux-armv7l/wheel/vermouth/gmx
2023-09-29T23:59:22,797   copying build/lib/vermouth/gmx/gro.py -> build/bdist.linux-armv7l/wheel/vermouth/gmx
2023-09-29T23:59:22,800   copying build/lib/vermouth/geometry.py -> build/bdist.linux-armv7l/wheel/vermouth
2023-09-29T23:59:22,802   copying build/lib/vermouth/map_input.py -> build/bdist.linux-armv7l/wheel/vermouth
2023-09-29T23:59:22,805   copying build/lib/vermouth/forcefield.py -> build/bdist.linux-armv7l/wheel/vermouth
2023-09-29T23:59:22,807   copying build/lib/vermouth/map_parser.py -> build/bdist.linux-armv7l/wheel/vermouth
2023-09-29T23:59:22,811   copying build/lib/vermouth/graph_utils.py -> build/bdist.linux-armv7l/wheel/vermouth
2023-09-29T23:59:22,815   creating build/bdist.linux-armv7l/wheel/vermouth/data
2023-09-29T23:59:22,816   creating build/bdist.linux-armv7l/wheel/vermouth/data/force_fields
2023-09-29T23:59:22,818   creating build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/elnedyn22p
2023-09-29T23:59:22,819   copying build/lib/vermouth/data/force_fields/elnedyn22p/aminoacids.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/elnedyn22p
2023-09-29T23:59:22,823   copying build/lib/vermouth/data/force_fields/elnedyn22p/general.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/elnedyn22p
2023-09-29T23:59:22,824   copying build/lib/vermouth/data/force_fields/elnedyn22p/citations.bib -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/elnedyn22p
2023-09-29T23:59:22,826   copying build/lib/vermouth/data/force_fields/elnedyn22p/modifications.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/elnedyn22p
2023-09-29T23:59:22,828   creating build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini30dev
2023-09-29T23:59:22,829   copying build/lib/vermouth/data/force_fields/martini30dev/aminoacids.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini30dev
2023-09-29T23:59:22,832   copying build/lib/vermouth/data/force_fields/martini30dev/citations.bib -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini30dev
2023-09-29T23:59:22,834   copying build/lib/vermouth/data/force_fields/martini30dev/modifications.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini30dev
2023-09-29T23:59:22,836   creating build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini22p
2023-09-29T23:59:22,837   copying build/lib/vermouth/data/force_fields/martini22p/aminoacids.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini22p
2023-09-29T23:59:22,840   copying build/lib/vermouth/data/force_fields/martini22p/general.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini22p
2023-09-29T23:59:22,842   copying build/lib/vermouth/data/force_fields/martini22p/citations.bib -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini22p
2023-09-29T23:59:22,845   copying build/lib/vermouth/data/force_fields/martini22p/modifications.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini22p
2023-09-29T23:59:22,847   creating build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini3001
2023-09-29T23:59:22,848   copying build/lib/vermouth/data/force_fields/martini3001/small_molecule_martini3.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini3001
2023-09-29T23:59:22,850   copying build/lib/vermouth/data/force_fields/martini3001/aminoacids.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini3001
2023-09-29T23:59:22,853   copying build/lib/vermouth/data/force_fields/martini3001/general.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini3001
2023-09-29T23:59:22,854   copying build/lib/vermouth/data/force_fields/martini3001/citations.bib -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini3001
2023-09-29T23:59:22,856   copying build/lib/vermouth/data/force_fields/martini3001/modifications.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini3001
2023-09-29T23:59:22,858   creating build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/charmm
2023-09-29T23:59:22,859   copying build/lib/vermouth/data/force_fields/charmm/aminoacids.rtp -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/charmm
2023-09-29T23:59:22,862   copying build/lib/vermouth/data/force_fields/charmm/modifications.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/charmm
2023-09-29T23:59:22,864   copying build/lib/vermouth/data/force_fields/charmm/small_molecule_charmm.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/charmm
2023-09-29T23:59:22,903   creating build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/amber
2023-09-29T23:59:22,904   copying build/lib/vermouth/data/force_fields/amber/aminoacids.rtp -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/amber
2023-09-29T23:59:22,906   copying build/lib/vermouth/data/force_fields/amber/modifications.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/amber
2023-09-29T23:59:22,909   creating build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/elnedyn21
2023-09-29T23:59:22,910   copying build/lib/vermouth/data/force_fields/elnedyn21/aminoacids.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/elnedyn21
2023-09-29T23:59:22,913   copying build/lib/vermouth/data/force_fields/elnedyn21/general.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/elnedyn21
2023-09-29T23:59:22,915   copying build/lib/vermouth/data/force_fields/elnedyn21/citations.bib -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/elnedyn21
2023-09-29T23:59:22,917   copying build/lib/vermouth/data/force_fields/elnedyn21/modifications.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/elnedyn21
2023-09-29T23:59:22,919   creating build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/elnedyn22
2023-09-29T23:59:22,920   copying build/lib/vermouth/data/force_fields/elnedyn22/aminoacids.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/elnedyn22
2023-09-29T23:59:22,923   copying build/lib/vermouth/data/force_fields/elnedyn22/general.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/elnedyn22
2023-09-29T23:59:22,924   copying build/lib/vermouth/data/force_fields/elnedyn22/citations.bib -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/elnedyn22
2023-09-29T23:59:22,927   copying build/lib/vermouth/data/force_fields/elnedyn22/modifications.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/elnedyn22
2023-09-29T23:59:22,929   creating build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/gromos
2023-09-29T23:59:22,930   copying build/lib/vermouth/data/force_fields/gromos/cofactors.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/gromos
2023-09-29T23:59:22,933   copying build/lib/vermouth/data/force_fields/gromos/aminoacids.rtp -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/gromos
2023-09-29T23:59:22,936   copying build/lib/vermouth/data/force_fields/gromos/modifications.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/gromos
2023-09-29T23:59:22,938   creating build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini22
2023-09-29T23:59:22,939   copying build/lib/vermouth/data/force_fields/martini22/aminoacids.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini22
2023-09-29T23:59:22,942   copying build/lib/vermouth/data/force_fields/martini22/general.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini22
2023-09-29T23:59:22,944   copying build/lib/vermouth/data/force_fields/martini22/citations.bib -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini22
2023-09-29T23:59:22,945   copying build/lib/vermouth/data/force_fields/martini22/nucleotides.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini22
2023-09-29T23:59:22,947   copying build/lib/vermouth/data/force_fields/martini22/modifications.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini22
2023-09-29T23:59:22,949   creating build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini30b32
2023-09-29T23:59:22,950   copying build/lib/vermouth/data/force_fields/martini30b32/aminoacids.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini30b32
2023-09-29T23:59:22,953   copying build/lib/vermouth/data/force_fields/martini30b32/citations.bib -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini30b32
2023-09-29T23:59:22,954   copying build/lib/vermouth/data/force_fields/martini30b32/small_molecules.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini30b32
2023-09-29T23:59:22,956   copying build/lib/vermouth/data/force_fields/martini30b32/modifications.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini30b32
2023-09-29T23:59:22,959   creating build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:22,960   copying build/lib/vermouth/data/mappings/arg.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:22,962   copying build/lib/vermouth/data/mappings/asp.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:22,964   copying build/lib/vermouth/data/mappings/pope.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:22,966   copying build/lib/vermouth/data/mappings/dmpc.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:22,968   copying build/lib/vermouth/data/mappings/pops.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:22,970   copying build/lib/vermouth/data/mappings/glu0.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:22,972   copying build/lib/vermouth/data/mappings/thr.charmm36.martini22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:22,974   copying build/lib/vermouth/data/mappings/his.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:22,975   copying build/lib/vermouth/data/mappings/leu.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:22,977   copying build/lib/vermouth/data/mappings/arg.charmm36.martini22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:22,979   copying build/lib/vermouth/data/mappings/trp.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:22,981   copying build/lib/vermouth/data/mappings/leu.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:22,983   copying build/lib/vermouth/data/mappings/trp.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:22,985   copying build/lib/vermouth/data/mappings/tyr.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:22,986   copying build/lib/vermouth/data/mappings/dopc.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:22,989   copying build/lib/vermouth/data/mappings/thr.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:22,991   copying build/lib/vermouth/data/mappings/cys.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:22,993   copying build/lib/vermouth/data/mappings/asn.charmm36.martini22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:22,995   copying build/lib/vermouth/data/mappings/glu.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:22,996   copying build/lib/vermouth/data/mappings/tpp.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:22,998   copying build/lib/vermouth/data/mappings/asn.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,000   copying build/lib/vermouth/data/mappings/gly.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,002   copying build/lib/vermouth/data/mappings/glu.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,004   copying build/lib/vermouth/data/mappings/val.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,006   copying build/lib/vermouth/data/mappings/ser.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,008   copying build/lib/vermouth/data/mappings/asp.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,010   copying build/lib/vermouth/data/mappings/val.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,012   copying build/lib/vermouth/data/mappings/hse.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,013   copying build/lib/vermouth/data/mappings/ala.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,015   copying build/lib/vermouth/data/mappings/asp0.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,017   copying build/lib/vermouth/data/mappings/ser.charmm36.martini22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,020   creating build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,021   copying build/lib/vermouth/data/mappings/martini3001/zthz.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,023   copying build/lib/vermouth/data/mappings/martini3001/thaz.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,024   copying build/lib/vermouth/data/mappings/martini3001/thp.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,026   copying build/lib/vermouth/data/mappings/martini3001/mcpe.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,028   copying build/lib/vermouth/data/mappings/martini3001/his.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,030   copying build/lib/vermouth/data/mappings/martini3001/naft.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,032   copying build/lib/vermouth/data/mappings/martini3001/tolu.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,034   copying build/lib/vermouth/data/mappings/martini3001/trp.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,035   copying build/lib/vermouth/data/mappings/martini3001/leu.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,037   copying build/lib/vermouth/data/mappings/martini3001/asn.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,039   copying build/lib/vermouth/data/mappings/martini3001/ser.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,041   copying build/lib/vermouth/data/mappings/martini3001/gln.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,043   copying build/lib/vermouth/data/mappings/martini3001/dman.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,044   copying build/lib/vermouth/data/mappings/martini3001/chxe.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,046   copying build/lib/vermouth/data/mappings/martini3001/thr.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,048   copying build/lib/vermouth/data/mappings/martini3001/phmk.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,050   copying build/lib/vermouth/data/mappings/martini3001/indo.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,052   copying build/lib/vermouth/data/mappings/martini3001/glu.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,054   copying build/lib/vermouth/data/mappings/martini3001/val.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,055   copying build/lib/vermouth/data/mappings/martini3001/oxyl.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,057   copying build/lib/vermouth/data/mappings/martini3001/zthp.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,059   copying build/lib/vermouth/data/mappings/martini3001/asp.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,061   copying build/lib/vermouth/data/mappings/martini3001/c3.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,062   copying build/lib/vermouth/data/mappings/martini3001/diox.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,064   copying build/lib/vermouth/data/mappings/martini3001/lys.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,067   copying build/lib/vermouth/data/mappings/martini3001/asp.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,069   copying build/lib/vermouth/data/mappings/martini3001/ala.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,070   copying build/lib/vermouth/data/mappings/martini3001/phe.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,073   copying build/lib/vermouth/data/mappings/martini3001/val.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,075   copying build/lib/vermouth/data/mappings/martini3001/hse.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,077   copying build/lib/vermouth/data/mappings/martini3001/benz.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,079   copying build/lib/vermouth/data/mappings/martini3001/ala.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,081   copying build/lib/vermouth/data/mappings/martini3001/bald.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,083   copying build/lib/vermouth/data/mappings/martini3001/ile.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,085   copying build/lib/vermouth/data/mappings/martini3001/eben.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,087   copying build/lib/vermouth/data/mappings/martini3001/thr.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,089   copying build/lib/vermouth/data/mappings/martini3001/meob.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,091   copying build/lib/vermouth/data/mappings/martini3001/his.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,093   copying build/lib/vermouth/data/mappings/martini3001/leu.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,094   copying build/lib/vermouth/data/mappings/martini3001/pyr1.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,096   copying build/lib/vermouth/data/mappings/martini3001/asn.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,098   copying build/lib/vermouth/data/mappings/martini3001/hip.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,099   copying build/lib/vermouth/data/mappings/martini3001/phen.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,101   copying build/lib/vermouth/data/mappings/martini3001/mind.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,102   copying build/lib/vermouth/data/mappings/martini3001/aspp.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,104   copying build/lib/vermouth/data/mappings/martini3001/styr.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,106   copying build/lib/vermouth/data/mappings/martini3001/ile.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,108   copying build/lib/vermouth/data/mappings/martini3001/met.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,109   copying build/lib/vermouth/data/mappings/martini3001/nitb.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,111   copying build/lib/vermouth/data/mappings/martini3001/pxyl.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,113   copying build/lib/vermouth/data/mappings/martini3001/pyrm.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,115   copying build/lib/vermouth/data/mappings/martini3001/lsn.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,116   copying build/lib/vermouth/data/mappings/martini3001/zimi.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,118   copying build/lib/vermouth/data/mappings/martini3001/imia.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,120   copying build/lib/vermouth/data/mappings/martini3001/tyr.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,122   copying build/lib/vermouth/data/mappings/martini3001/glup.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,124   copying build/lib/vermouth/data/mappings/martini3001/modifications.amber.mapping -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,126   copying build/lib/vermouth/data/mappings/martini3001/arg.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,128   copying build/lib/vermouth/data/mappings/martini3001/hie.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,129   copying build/lib/vermouth/data/mappings/martini3001/pcro.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,131   copying build/lib/vermouth/data/mappings/martini3001/antr.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,133   copying build/lib/vermouth/data/mappings/martini3001/mboa.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,135   copying build/lib/vermouth/data/mappings/martini3001/sm139.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,137   copying build/lib/vermouth/data/mappings/martini3001/cys.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,139   copying build/lib/vermouth/data/mappings/martini3001/gln.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,141   copying build/lib/vermouth/data/mappings/martini3001/pyrl.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,142   copying build/lib/vermouth/data/mappings/martini3001/lys.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,144   copying build/lib/vermouth/data/mappings/martini3001/qinl.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,146   copying build/lib/vermouth/data/mappings/martini3001/cys.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,148   copying build/lib/vermouth/data/mappings/martini3001/pyrd.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,150   copying build/lib/vermouth/data/mappings/martini3001/glu.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,152   copying build/lib/vermouth/data/mappings/martini3001/fura.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,154   copying build/lib/vermouth/data/mappings/martini3001/prld.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,156   copying build/lib/vermouth/data/mappings/martini3001/phe.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,158   copying build/lib/vermouth/data/mappings/martini3001/ash.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,160   copying build/lib/vermouth/data/mappings/martini3001/glh.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,162   copying build/lib/vermouth/data/mappings/martini3001/lyn.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,164   copying build/lib/vermouth/data/mappings/martini3001/gly.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,166   copying build/lib/vermouth/data/mappings/martini3001/pro.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,168   copying build/lib/vermouth/data/mappings/martini3001/cume.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,170   copying build/lib/vermouth/data/mappings/martini3001/diol.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,172   copying build/lib/vermouth/data/mappings/martini3001/pro.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,174   copying build/lib/vermouth/data/mappings/martini3001/ser.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,175   copying build/lib/vermouth/data/mappings/martini3001/cpen.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,177   copying build/lib/vermouth/data/mappings/martini3001/thf.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,179   copying build/lib/vermouth/data/mappings/martini3001/arg.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,180   copying build/lib/vermouth/data/mappings/martini3001/tyr.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,182   copying build/lib/vermouth/data/mappings/martini3001/hsd.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,184   copying build/lib/vermouth/data/mappings/martini3001/gly.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,186   copying build/lib/vermouth/data/mappings/martini3001/hsp.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,188   copying build/lib/vermouth/data/mappings/martini3001/modifications.charmm36.mapping -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,190   copying build/lib/vermouth/data/mappings/martini3001/met.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,192   copying build/lib/vermouth/data/mappings/martini3001/trp.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,194   copying build/lib/vermouth/data/mappings/martini3001/inda.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,195   copying build/lib/vermouth/data/mappings/martini3001/thip.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,197   copying build/lib/vermouth/data/mappings/martini3001/hid.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,199   copying build/lib/vermouth/data/mappings/martini3001/mxyl.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001
2023-09-29T23:59:23,200   copying build/lib/vermouth/data/mappings/asn.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,202   copying build/lib/vermouth/data/mappings/ile.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,204   copying build/lib/vermouth/data/mappings/met.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,206   copying build/lib/vermouth/data/mappings/gln.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,207   copying build/lib/vermouth/data/mappings/nad.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,209   copying build/lib/vermouth/data/mappings/fmn.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,211   copying build/lib/vermouth/data/mappings/tyr.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,214   creating build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:23,215   copying build/lib/vermouth/data/mappings/elnedyn21/his.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:23,217   copying build/lib/vermouth/data/mappings/elnedyn21/trp.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:23,219   copying build/lib/vermouth/data/mappings/elnedyn21/leu.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:23,221   copying build/lib/vermouth/data/mappings/elnedyn21/ser.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:23,223   copying build/lib/vermouth/data/mappings/elnedyn21/thr.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:23,224   copying build/lib/vermouth/data/mappings/elnedyn21/glu.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:23,226   copying build/lib/vermouth/data/mappings/elnedyn21/val.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:23,228   copying build/lib/vermouth/data/mappings/elnedyn21/gln.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:23,230   copying build/lib/vermouth/data/mappings/elnedyn21/asp.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:23,232   copying build/lib/vermouth/data/mappings/elnedyn21/arg.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:23,234   copying build/lib/vermouth/data/mappings/elnedyn21/asp.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:23,236   copying build/lib/vermouth/data/mappings/elnedyn21/ala.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:23,238   copying build/lib/vermouth/data/mappings/elnedyn21/glu.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:23,240   copying build/lib/vermouth/data/mappings/elnedyn21/asn.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:23,242   copying build/lib/vermouth/data/mappings/elnedyn21/ile.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:23,244   copying build/lib/vermouth/data/mappings/elnedyn21/met.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:23,245   copying build/lib/vermouth/data/mappings/elnedyn21/asn.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:23,248   copying build/lib/vermouth/data/mappings/elnedyn21/tyr.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:23,249   copying build/lib/vermouth/data/mappings/elnedyn21/arg.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:23,252   copying build/lib/vermouth/data/mappings/elnedyn21/gln.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:23,254   copying build/lib/vermouth/data/mappings/elnedyn21/lys.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:23,255   copying build/lib/vermouth/data/mappings/elnedyn21/cys.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:23,257   copying build/lib/vermouth/data/mappings/elnedyn21/phe.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:23,259   copying build/lib/vermouth/data/mappings/elnedyn21/thr.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:23,260   copying build/lib/vermouth/data/mappings/elnedyn21/pro.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:23,262   copying build/lib/vermouth/data/mappings/elnedyn21/modifications.mapping -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:23,264   copying build/lib/vermouth/data/mappings/elnedyn21/ser.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:23,266   copying build/lib/vermouth/data/mappings/elnedyn21/gly.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:23,267   copying build/lib/vermouth/data/mappings/elnedyn21/lys.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21
2023-09-29T23:59:23,270   creating build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,271   creating build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn/elnedyn22p
2023-09-29T23:59:23,273   copying build/lib/vermouth/data/mappings/elnedyn/elnedyn22p/ser.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn/elnedyn22p
2023-09-29T23:59:23,275   copying build/lib/vermouth/data/mappings/elnedyn/elnedyn22p/gln.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn/elnedyn22p
2023-09-29T23:59:23,277   copying build/lib/vermouth/data/mappings/elnedyn/elnedyn22p/arg.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn/elnedyn22p
2023-09-29T23:59:23,278   copying build/lib/vermouth/data/mappings/elnedyn/elnedyn22p/asp.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn/elnedyn22p
2023-09-29T23:59:23,280   copying build/lib/vermouth/data/mappings/elnedyn/elnedyn22p/glu.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn/elnedyn22p
2023-09-29T23:59:23,282   copying build/lib/vermouth/data/mappings/elnedyn/elnedyn22p/asn.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn/elnedyn22p
2023-09-29T23:59:23,284   copying build/lib/vermouth/data/mappings/elnedyn/elnedyn22p/thr.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn/elnedyn22p
2023-09-29T23:59:23,286   copying build/lib/vermouth/data/mappings/elnedyn/elnedyn22p/lys.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn/elnedyn22p
2023-09-29T23:59:23,288   copying build/lib/vermouth/data/mappings/elnedyn/pope.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,290   copying build/lib/vermouth/data/mappings/elnedyn/dmpc.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,292   copying build/lib/vermouth/data/mappings/elnedyn/pops.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,294   copying build/lib/vermouth/data/mappings/elnedyn/his.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,296   copying build/lib/vermouth/data/mappings/elnedyn/trp.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,298   copying build/lib/vermouth/data/mappings/elnedyn/leu.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,300   copying build/lib/vermouth/data/mappings/elnedyn/dopc.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,302   copying build/lib/vermouth/data/mappings/elnedyn/thr.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,304   copying build/lib/vermouth/data/mappings/elnedyn/glu.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,306   copying build/lib/vermouth/data/mappings/elnedyn/modifications.elnedyn22.mapping -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,308   copying build/lib/vermouth/data/mappings/elnedyn/modifications.elnedyn21.mapping -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,310   copying build/lib/vermouth/data/mappings/elnedyn/val.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,312   copying build/lib/vermouth/data/mappings/elnedyn/asp.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,314   copying build/lib/vermouth/data/mappings/elnedyn/ala.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,316   copying build/lib/vermouth/data/mappings/elnedyn/asn.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,318   copying build/lib/vermouth/data/mappings/elnedyn/ile.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,320   copying build/lib/vermouth/data/mappings/elnedyn/met.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,322   copying build/lib/vermouth/data/mappings/elnedyn/modifications.elnedyn22p.mapping -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,324   copying build/lib/vermouth/data/mappings/elnedyn/tyr.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,326   copying build/lib/vermouth/data/mappings/elnedyn/arg.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,328   copying build/lib/vermouth/data/mappings/elnedyn/popg.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,330   copying build/lib/vermouth/data/mappings/elnedyn/chol.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,332   copying build/lib/vermouth/data/mappings/elnedyn/gln.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,334   copying build/lib/vermouth/data/mappings/elnedyn/lys.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,336   copying build/lib/vermouth/data/mappings/elnedyn/cys.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,337   copying build/lib/vermouth/data/mappings/elnedyn/phe.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,339   copying build/lib/vermouth/data/mappings/elnedyn/pro.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,341   copying build/lib/vermouth/data/mappings/elnedyn/popc.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,343   copying build/lib/vermouth/data/mappings/elnedyn/ser.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,345   copying build/lib/vermouth/data/mappings/elnedyn/gly.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,346   copying build/lib/vermouth/data/mappings/elnedyn/dppc.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,348   copying build/lib/vermouth/data/mappings/elnedyn/dppg.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn
2023-09-29T23:59:23,351   copying build/lib/vermouth/data/mappings/arg.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,352   copying build/lib/vermouth/data/mappings/ile.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,354   copying build/lib/vermouth/data/mappings/phe.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,356   copying build/lib/vermouth/data/mappings/popg.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,358   copying build/lib/vermouth/data/mappings/chol.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,360   copying build/lib/vermouth/data/mappings/asp.charmm36.martini22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,362   copying build/lib/vermouth/data/mappings/gln.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,364   copying build/lib/vermouth/data/mappings/lys.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,366   copying build/lib/vermouth/data/mappings/cys.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,367   copying build/lib/vermouth/data/mappings/lys.charmm36.martini22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,369   copying build/lib/vermouth/data/mappings/phe.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,371   copying build/lib/vermouth/data/mappings/lys.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,373   copying build/lib/vermouth/data/mappings/pro.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,375   copying build/lib/vermouth/data/mappings/modifications.mapping -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,377   copying build/lib/vermouth/data/mappings/his.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,378   copying build/lib/vermouth/data/mappings/popc.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,381   copying build/lib/vermouth/data/mappings/ala.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,383   copying build/lib/vermouth/data/mappings/ser.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,385   copying build/lib/vermouth/data/mappings/gln.charmm36.martini22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,387   copying build/lib/vermouth/data/mappings/hsd.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,389   copying build/lib/vermouth/data/mappings/met.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,391   copying build/lib/vermouth/data/mappings/gly.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,393   copying build/lib/vermouth/data/mappings/dppc.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,395   copying build/lib/vermouth/data/mappings/hsp.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,397   copying build/lib/vermouth/data/mappings/modifications.gromos.mapping -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,399   copying build/lib/vermouth/data/mappings/thr.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,401   creating build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32
2023-09-29T23:59:23,403   copying build/lib/vermouth/data/mappings/martini30b32/his.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32
2023-09-29T23:59:23,405   copying build/lib/vermouth/data/mappings/martini30b32/trp.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32
2023-09-29T23:59:23,406   copying build/lib/vermouth/data/mappings/martini30b32/leu.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32
2023-09-29T23:59:23,408   copying build/lib/vermouth/data/mappings/martini30b32/thr.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32
2023-09-29T23:59:23,410   copying build/lib/vermouth/data/mappings/martini30b32/glu.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32
2023-09-29T23:59:23,412   copying build/lib/vermouth/data/mappings/martini30b32/val.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32
2023-09-29T23:59:23,414   copying build/lib/vermouth/data/mappings/martini30b32/asp.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32
2023-09-29T23:59:23,416   copying build/lib/vermouth/data/mappings/martini30b32/benz.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32
2023-09-29T23:59:23,418   copying build/lib/vermouth/data/mappings/martini30b32/ala.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32
2023-09-29T23:59:23,419   copying build/lib/vermouth/data/mappings/martini30b32/asn.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32
2023-09-29T23:59:23,421   copying build/lib/vermouth/data/mappings/martini30b32/ile.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32
2023-09-29T23:59:23,423   copying build/lib/vermouth/data/mappings/martini30b32/met.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32
2023-09-29T23:59:23,425   copying build/lib/vermouth/data/mappings/martini30b32/tyr.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32
2023-09-29T23:59:23,426   copying build/lib/vermouth/data/mappings/martini30b32/arg.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32
2023-09-29T23:59:23,428   copying build/lib/vermouth/data/mappings/martini30b32/gln.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32
2023-09-29T23:59:23,430   copying build/lib/vermouth/data/mappings/martini30b32/lys.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32
2023-09-29T23:59:23,432   copying build/lib/vermouth/data/mappings/martini30b32/cys.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32
2023-09-29T23:59:23,434   copying build/lib/vermouth/data/mappings/martini30b32/phe.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32
2023-09-29T23:59:23,436   copying build/lib/vermouth/data/mappings/martini30b32/pro.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32
2023-09-29T23:59:23,438   copying build/lib/vermouth/data/mappings/martini30b32/modifications.mapping -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32
2023-09-29T23:59:23,440   copying build/lib/vermouth/data/mappings/martini30b32/ser.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32
2023-09-29T23:59:23,441   copying build/lib/vermouth/data/mappings/martini30b32/hsd.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32
2023-09-29T23:59:23,443   copying build/lib/vermouth/data/mappings/martini30b32/gly.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32
2023-09-29T23:59:23,445   copying build/lib/vermouth/data/mappings/dppg.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,447   copying build/lib/vermouth/data/mappings/pro.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,449   copying build/lib/vermouth/data/mappings/glu.charmm36.martini22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings
2023-09-29T23:59:23,451   copying build/lib/vermouth/data/quotes.txt -> build/bdist.linux-armv7l/wheel/vermouth/data
2023-09-29T23:59:23,453   copying build/lib/vermouth/file_writer.py -> build/bdist.linux-armv7l/wheel/vermouth
2023-09-29T23:59:23,455   copying build/lib/vermouth/citation_parser.py -> build/bdist.linux-armv7l/wheel/vermouth
2023-09-29T23:59:23,457   copying build/lib/vermouth/selectors.py -> build/bdist.linux-armv7l/wheel/vermouth
2023-09-29T23:59:23,460   copying build/lib/vermouth/edge_tuning.py -> build/bdist.linux-armv7l/wheel/vermouth
2023-09-29T23:59:23,462   copying build/lib/vermouth/ffinput.py -> build/bdist.linux-armv7l/wheel/vermouth
2023-09-29T23:59:23,465   copying build/lib/vermouth/__init__.py -> build/bdist.linux-armv7l/wheel/vermouth
2023-09-29T23:59:23,468   creating build/bdist.linux-armv7l/wheel/vermouth/processors
2023-09-29T23:59:23,469   copying build/lib/vermouth/processors/quote.py -> build/bdist.linux-armv7l/wheel/vermouth/processors
2023-09-29T23:59:23,471   copying build/lib/vermouth/processors/apply_rubber_band.py -> build/bdist.linux-armv7l/wheel/vermouth/processors
2023-09-29T23:59:23,473   copying build/lib/vermouth/processors/canonicalize_modifications.py -> build/bdist.linux-armv7l/wheel/vermouth/processors
2023-09-29T23:59:23,476   copying build/lib/vermouth/processors/merge_all_molecules.py -> build/bdist.linux-armv7l/wheel/vermouth/processors
2023-09-29T23:59:23,478   copying build/lib/vermouth/processors/do_mapping.py -> build/bdist.linux-armv7l/wheel/vermouth/processors
2023-09-29T23:59:23,481   copying build/lib/vermouth/processors/set_molecule_meta.py -> build/bdist.linux-armv7l/wheel/vermouth/processors
2023-09-29T23:59:23,483   copying build/lib/vermouth/processors/go_vs_includes.py -> build/bdist.linux-armv7l/wheel/vermouth/processors
2023-09-29T23:59:23,486   copying build/lib/vermouth/processors/sort_molecule_atoms.py -> build/bdist.linux-armv7l/wheel/vermouth/processors
2023-09-29T23:59:23,488   copying build/lib/vermouth/processors/pdb_reader.py -> build/bdist.linux-armv7l/wheel/vermouth/processors
2023-09-29T23:59:23,490   copying build/lib/vermouth/processors/name_moltype.py -> build/bdist.linux-armv7l/wheel/vermouth/processors
2023-09-29T23:59:23,492   copying build/lib/vermouth/processors/tune_cystein_bridges.py -> build/bdist.linux-armv7l/wheel/vermouth/processors
2023-09-29T23:59:23,494   copying build/lib/vermouth/processors/rename_modified_residues.py -> build/bdist.linux-armv7l/wheel/vermouth/processors
2023-09-29T23:59:23,496   copying build/lib/vermouth/processors/add_molecule_edges.py -> build/bdist.linux-armv7l/wheel/vermouth/processors
2023-09-29T23:59:23,498   copying build/lib/vermouth/processors/do_links.py -> build/bdist.linux-armv7l/wheel/vermouth/processors
2023-09-29T23:59:23,500   copying build/lib/vermouth/processors/attach_mass.py -> build/bdist.linux-armv7l/wheel/vermouth/processors
2023-09-29T23:59:23,501   copying build/lib/vermouth/processors/merge_chains.py -> build/bdist.linux-armv7l/wheel/vermouth/processors
2023-09-29T23:59:23,503   copying build/lib/vermouth/processors/repair_graph.py -> build/bdist.linux-armv7l/wheel/vermouth/processors
2023-09-29T23:59:23,506   copying build/lib/vermouth/processors/processor.py -> build/bdist.linux-armv7l/wheel/vermouth/processors
2023-09-29T23:59:23,507   copying build/lib/vermouth/processors/locate_charge_dummies.py -> build/bdist.linux-armv7l/wheel/vermouth/processors
2023-09-29T23:59:23,509   copying build/lib/vermouth/processors/gro_reader.py -> build/bdist.linux-armv7l/wheel/vermouth/processors
2023-09-29T23:59:23,511   copying build/lib/vermouth/processors/annotate_mut_mod.py -> build/bdist.linux-armv7l/wheel/vermouth/processors
2023-09-29T23:59:23,514   copying build/lib/vermouth/processors/make_bonds.py -> build/bdist.linux-armv7l/wheel/vermouth/processors
2023-09-29T23:59:23,516   copying build/lib/vermouth/processors/__init__.py -> build/bdist.linux-armv7l/wheel/vermouth/processors
2023-09-29T23:59:23,518   copying build/lib/vermouth/processors/average_beads.py -> build/bdist.linux-armv7l/wheel/vermouth/processors
2023-09-29T23:59:23,520   copying build/lib/vermouth/processors/apply_posres.py -> build/bdist.linux-armv7l/wheel/vermouth/processors
2023-09-29T23:59:23,522   creating build/bdist.linux-armv7l/wheel/vermouth/dssp
2023-09-29T23:59:23,523   copying build/lib/vermouth/dssp/__init__.py -> build/bdist.linux-armv7l/wheel/vermouth/dssp
2023-09-29T23:59:23,525   copying build/lib/vermouth/dssp/dssp.py -> build/bdist.linux-armv7l/wheel/vermouth/dssp
2023-09-29T23:59:23,528   copying build/lib/vermouth/utils.py -> build/bdist.linux-armv7l/wheel/vermouth
2023-09-29T23:59:23,531   creating build/bdist.linux-armv7l/wheel/vermouth/pdb
2023-09-29T23:59:23,533   copying build/lib/vermouth/pdb/pdb.py -> build/bdist.linux-armv7l/wheel/vermouth/pdb
2023-09-29T23:59:23,536   copying build/lib/vermouth/pdb/__init__.py -> build/bdist.linux-armv7l/wheel/vermouth/pdb
2023-09-29T23:59:23,539   copying build/lib/vermouth/log_helpers.py -> build/bdist.linux-armv7l/wheel/vermouth
2023-09-29T23:59:23,542   creating build/bdist.linux-armv7l/wheel/vermouth/graphing
2023-09-29T23:59:23,544   copying build/lib/vermouth/graphing/grappa.py -> build/bdist.linux-armv7l/wheel/vermouth/graphing
2023-09-29T23:59:23,547   copying build/lib/vermouth/truncating_formatter.py -> build/bdist.linux-armv7l/wheel/vermouth
2023-09-29T23:59:23,551   running install_egg_info
2023-09-29T23:59:23,560   Copying vermouth.egg-info to build/bdist.linux-armv7l/wheel/vermouth-0.9.5-py3.11.egg-info
2023-09-29T23:59:23,580   running install_scripts
2023-09-29T23:59:23,582   creating build/bdist.linux-armv7l/wheel/vermouth-0.9.5.data
2023-09-29T23:59:23,583   creating build/bdist.linux-armv7l/wheel/vermouth-0.9.5.data/scripts
2023-09-29T23:59:23,584   copying build/scripts-3.11/martinize2 -> build/bdist.linux-armv7l/wheel/vermouth-0.9.5.data/scripts
2023-09-29T23:59:23,587   changing mode of build/bdist.linux-armv7l/wheel/vermouth-0.9.5.data/scripts/martinize2 to 755
2023-09-29T23:59:23,610   creating build/bdist.linux-armv7l/wheel/vermouth-0.9.5.dist-info/WHEEL
2023-09-29T23:59:23,613   creating '/tmp/pip-wheel-0d5jndg7/.tmp-8plpdyxw/vermouth-0.9.5-py2.py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-09-29T23:59:23,617   adding 'vermouth/__init__.py'
2023-09-29T23:59:23,619   adding 'vermouth/citation_parser.py'
2023-09-29T23:59:23,623   adding 'vermouth/edge_tuning.py'
2023-09-29T23:59:23,631   adding 'vermouth/ffinput.py'
2023-09-29T23:59:23,633   adding 'vermouth/file_writer.py'
2023-09-29T23:59:23,635   adding 'vermouth/forcefield.py'
2023-09-29T23:59:23,636   adding 'vermouth/geometry.py'
2023-09-29T23:59:23,639   adding 'vermouth/graph_utils.py'
2023-09-29T23:59:23,646   adding 'vermouth/ismags.py'
2023-09-29T23:59:23,649   adding 'vermouth/log_helpers.py'
2023-09-29T23:59:23,653   adding 'vermouth/map_input.py'
2023-09-29T23:59:23,657   adding 'vermouth/map_parser.py'
2023-09-29T23:59:23,664   adding 'vermouth/molecule.py'
2023-09-29T23:59:23,668   adding 'vermouth/parser_utils.py'
2023-09-29T23:59:23,670   adding 'vermouth/selectors.py'
2023-09-29T23:59:23,671   adding 'vermouth/system.py'
2023-09-29T23:59:23,672   adding 'vermouth/truncating_formatter.py'
2023-09-29T23:59:23,674   adding 'vermouth/utils.py'
2023-09-29T23:59:23,676   adding 'vermouth/data/quotes.txt'
2023-09-29T23:59:23,681   adding 'vermouth/data/force_fields/amber/aminoacids.rtp'
2023-09-29T23:59:23,683   adding 'vermouth/data/force_fields/amber/modifications.ff'
2023-09-29T23:59:23,686   adding 'vermouth/data/force_fields/charmm/aminoacids.rtp'
2023-09-29T23:59:23,688   adding 'vermouth/data/force_fields/charmm/modifications.ff'
2023-09-29T23:59:23,893   adding 'vermouth/data/force_fields/charmm/small_molecule_charmm.ff'
2023-09-29T23:59:23,910   adding 'vermouth/data/force_fields/elnedyn21/aminoacids.ff'
2023-09-29T23:59:23,912   adding 'vermouth/data/force_fields/elnedyn21/citations.bib'
2023-09-29T23:59:23,913   adding 'vermouth/data/force_fields/elnedyn21/general.ff'
2023-09-29T23:59:23,914   adding 'vermouth/data/force_fields/elnedyn21/modifications.ff'
2023-09-29T23:59:23,917   adding 'vermouth/data/force_fields/elnedyn22/aminoacids.ff'
2023-09-29T23:59:23,918   adding 'vermouth/data/force_fields/elnedyn22/citations.bib'
2023-09-29T23:59:23,919   adding 'vermouth/data/force_fields/elnedyn22/general.ff'
2023-09-29T23:59:23,920   adding 'vermouth/data/force_fields/elnedyn22/modifications.ff'
2023-09-29T23:59:23,923   adding 'vermouth/data/force_fields/elnedyn22p/aminoacids.ff'
2023-09-29T23:59:23,924   adding 'vermouth/data/force_fields/elnedyn22p/citations.bib'
2023-09-29T23:59:23,925   adding 'vermouth/data/force_fields/elnedyn22p/general.ff'
2023-09-29T23:59:23,927   adding 'vermouth/data/force_fields/elnedyn22p/modifications.ff'
2023-09-29T23:59:23,931   adding 'vermouth/data/force_fields/gromos/aminoacids.rtp'
2023-09-29T23:59:23,934   adding 'vermouth/data/force_fields/gromos/cofactors.ff'
2023-09-29T23:59:23,935   adding 'vermouth/data/force_fields/gromos/modifications.ff'
2023-09-29T23:59:23,938   adding 'vermouth/data/force_fields/martini22/aminoacids.ff'
2023-09-29T23:59:23,939   adding 'vermouth/data/force_fields/martini22/citations.bib'
2023-09-29T23:59:23,941   adding 'vermouth/data/force_fields/martini22/general.ff'
2023-09-29T23:59:23,942   adding 'vermouth/data/force_fields/martini22/modifications.ff'
2023-09-29T23:59:23,944   adding 'vermouth/data/force_fields/martini22/nucleotides.ff'
2023-09-29T23:59:23,946   adding 'vermouth/data/force_fields/martini22p/aminoacids.ff'
2023-09-29T23:59:23,948   adding 'vermouth/data/force_fields/martini22p/citations.bib'
2023-09-29T23:59:23,949   adding 'vermouth/data/force_fields/martini22p/general.ff'
2023-09-29T23:59:23,950   adding 'vermouth/data/force_fields/martini22p/modifications.ff'
2023-09-29T23:59:23,954   adding 'vermouth/data/force_fields/martini3001/aminoacids.ff'
2023-09-29T23:59:23,956   adding 'vermouth/data/force_fields/martini3001/citations.bib'
2023-09-29T23:59:23,957   adding 'vermouth/data/force_fields/martini3001/general.ff'
2023-09-29T23:59:23,958   adding 'vermouth/data/force_fields/martini3001/modifications.ff'
2023-09-29T23:59:23,960   adding 'vermouth/data/force_fields/martini3001/small_molecule_martini3.ff'
2023-09-29T23:59:23,963   adding 'vermouth/data/force_fields/martini30b32/aminoacids.ff'
2023-09-29T23:59:23,965   adding 'vermouth/data/force_fields/martini30b32/citations.bib'
2023-09-29T23:59:23,966   adding 'vermouth/data/force_fields/martini30b32/modifications.ff'
2023-09-29T23:59:23,967   adding 'vermouth/data/force_fields/martini30b32/small_molecules.ff'
2023-09-29T23:59:23,970   adding 'vermouth/data/force_fields/martini30dev/aminoacids.ff'
2023-09-29T23:59:23,971   adding 'vermouth/data/force_fields/martini30dev/citations.bib'
2023-09-29T23:59:23,972   adding 'vermouth/data/force_fields/martini30dev/modifications.ff'
2023-09-29T23:59:23,975   adding 'vermouth/data/mappings/ala.charmm36.map'
2023-09-29T23:59:23,977   adding 'vermouth/data/mappings/ala.gromos.map'
2023-09-29T23:59:23,978   adding 'vermouth/data/mappings/arg.charmm36.map'
2023-09-29T23:59:23,980   adding 'vermouth/data/mappings/arg.charmm36.martini22p.map'
2023-09-29T23:59:23,981   adding 'vermouth/data/mappings/arg.gromos.map'
2023-09-29T23:59:23,982   adding 'vermouth/data/mappings/asn.charmm36.map'
2023-09-29T23:59:23,983   adding 'vermouth/data/mappings/asn.charmm36.martini22p.map'
2023-09-29T23:59:23,984   adding 'vermouth/data/mappings/asn.gromos.map'
2023-09-29T23:59:23,986   adding 'vermouth/data/mappings/asp.charmm36.map'
2023-09-29T23:59:23,987   adding 'vermouth/data/mappings/asp.charmm36.martini22p.map'
2023-09-29T23:59:23,989   adding 'vermouth/data/mappings/asp.gromos.map'
2023-09-29T23:59:23,990   adding 'vermouth/data/mappings/asp0.gromos.map'
2023-09-29T23:59:23,991   adding 'vermouth/data/mappings/chol.charmm36.map'
2023-09-29T23:59:23,992   adding 'vermouth/data/mappings/cys.charmm36.map'
2023-09-29T23:59:23,994   adding 'vermouth/data/mappings/cys.gromos.map'
2023-09-29T23:59:23,995   adding 'vermouth/data/mappings/dmpc.charmm36.map'
2023-09-29T23:59:23,997   adding 'vermouth/data/mappings/dopc.charmm36.map'
2023-09-29T23:59:23,999   adding 'vermouth/data/mappings/dppc.charmm36.map'
2023-09-29T23:59:24,000   adding 'vermouth/data/mappings/dppg.charmm36.map'
2023-09-29T23:59:24,002   adding 'vermouth/data/mappings/fmn.gromos.map'
2023-09-29T23:59:24,003   adding 'vermouth/data/mappings/gln.charmm36.map'
2023-09-29T23:59:24,004   adding 'vermouth/data/mappings/gln.charmm36.martini22p.map'
2023-09-29T23:59:24,005   adding 'vermouth/data/mappings/gln.gromos.map'
2023-09-29T23:59:24,007   adding 'vermouth/data/mappings/glu.charmm36.map'
2023-09-29T23:59:24,008   adding 'vermouth/data/mappings/glu.charmm36.martini22p.map'
2023-09-29T23:59:24,009   adding 'vermouth/data/mappings/glu.gromos.map'
2023-09-29T23:59:24,010   adding 'vermouth/data/mappings/glu0.gromos.map'
2023-09-29T23:59:24,012   adding 'vermouth/data/mappings/gly.charmm36.map'
2023-09-29T23:59:24,013   adding 'vermouth/data/mappings/gly.gromos.map'
2023-09-29T23:59:24,014   adding 'vermouth/data/mappings/his.charmm36.map'
2023-09-29T23:59:24,015   adding 'vermouth/data/mappings/his.gromos.map'
2023-09-29T23:59:24,017   adding 'vermouth/data/mappings/hsd.charmm36.map'
2023-09-29T23:59:24,018   adding 'vermouth/data/mappings/hse.charmm36.map'
2023-09-29T23:59:24,019   adding 'vermouth/data/mappings/hsp.charmm36.map'
2023-09-29T23:59:24,020   adding 'vermouth/data/mappings/ile.charmm36.map'
2023-09-29T23:59:24,022   adding 'vermouth/data/mappings/ile.gromos.map'
2023-09-29T23:59:24,023   adding 'vermouth/data/mappings/leu.charmm36.map'
2023-09-29T23:59:24,024   adding 'vermouth/data/mappings/leu.gromos.map'
2023-09-29T23:59:24,025   adding 'vermouth/data/mappings/lys.charmm36.map'
2023-09-29T23:59:24,027   adding 'vermouth/data/mappings/lys.charmm36.martini22p.map'
2023-09-29T23:59:24,028   adding 'vermouth/data/mappings/lys.gromos.map'
2023-09-29T23:59:24,029   adding 'vermouth/data/mappings/met.charmm36.map'
2023-09-29T23:59:24,030   adding 'vermouth/data/mappings/met.gromos.map'
2023-09-29T23:59:24,032   adding 'vermouth/data/mappings/modifications.gromos.mapping'
2023-09-29T23:59:24,033   adding 'vermouth/data/mappings/modifications.mapping'
2023-09-29T23:59:24,034   adding 'vermouth/data/mappings/nad.gromos.map'
2023-09-29T23:59:24,036   adding 'vermouth/data/mappings/phe.charmm36.map'
2023-09-29T23:59:24,037   adding 'vermouth/data/mappings/phe.gromos.map'
2023-09-29T23:59:24,039   adding 'vermouth/data/mappings/popc.charmm36.map'
2023-09-29T23:59:24,040   adding 'vermouth/data/mappings/pope.charmm36.map'
2023-09-29T23:59:24,042   adding 'vermouth/data/mappings/popg.charmm36.map'
2023-09-29T23:59:24,044   adding 'vermouth/data/mappings/pops.charmm36.map'
2023-09-29T23:59:24,046   adding 'vermouth/data/mappings/pro.charmm36.map'
2023-09-29T23:59:24,047   adding 'vermouth/data/mappings/pro.gromos.map'
2023-09-29T23:59:24,048   adding 'vermouth/data/mappings/ser.charmm36.map'
2023-09-29T23:59:24,049   adding 'vermouth/data/mappings/ser.charmm36.martini22p.map'
2023-09-29T23:59:24,050   adding 'vermouth/data/mappings/ser.gromos.map'
2023-09-29T23:59:24,051   adding 'vermouth/data/mappings/thr.charmm36.map'
2023-09-29T23:59:24,053   adding 'vermouth/data/mappings/thr.charmm36.martini22p.map'
2023-09-29T23:59:24,054   adding 'vermouth/data/mappings/thr.gromos.map'
2023-09-29T23:59:24,055   adding 'vermouth/data/mappings/tpp.gromos.map'
2023-09-29T23:59:24,056   adding 'vermouth/data/mappings/trp.charmm36.map'
2023-09-29T23:59:24,057   adding 'vermouth/data/mappings/trp.gromos.map'
2023-09-29T23:59:24,059   adding 'vermouth/data/mappings/tyr.charmm36.map'
2023-09-29T23:59:24,060   adding 'vermouth/data/mappings/tyr.gromos.map'
2023-09-29T23:59:24,061   adding 'vermouth/data/mappings/val.charmm36.map'
2023-09-29T23:59:24,063   adding 'vermouth/data/mappings/val.gromos.map'
2023-09-29T23:59:24,065   adding 'vermouth/data/mappings/elnedyn/ala.charmm36.map'
2023-09-29T23:59:24,066   adding 'vermouth/data/mappings/elnedyn/arg.charmm36.map'
2023-09-29T23:59:24,067   adding 'vermouth/data/mappings/elnedyn/asn.charmm36.map'
2023-09-29T23:59:24,069   adding 'vermouth/data/mappings/elnedyn/asp.charmm36.map'
2023-09-29T23:59:24,070   adding 'vermouth/data/mappings/elnedyn/chol.charmm36.map'
2023-09-29T23:59:24,072   adding 'vermouth/data/mappings/elnedyn/cys.charmm36.map'
2023-09-29T23:59:24,073   adding 'vermouth/data/mappings/elnedyn/dmpc.charmm36.map'
2023-09-29T23:59:24,075   adding 'vermouth/data/mappings/elnedyn/dopc.charmm36.map'
2023-09-29T23:59:24,077   adding 'vermouth/data/mappings/elnedyn/dppc.charmm36.map'
2023-09-29T23:59:24,078   adding 'vermouth/data/mappings/elnedyn/dppg.charmm36.map'
2023-09-29T23:59:24,080   adding 'vermouth/data/mappings/elnedyn/gln.charmm36.map'
2023-09-29T23:59:24,081   adding 'vermouth/data/mappings/elnedyn/glu.charmm36.map'
2023-09-29T23:59:24,083   adding 'vermouth/data/mappings/elnedyn/gly.charmm36.map'
2023-09-29T23:59:24,084   adding 'vermouth/data/mappings/elnedyn/his.charmm36.map'
2023-09-29T23:59:24,085   adding 'vermouth/data/mappings/elnedyn/ile.charmm36.map'
2023-09-29T23:59:24,087   adding 'vermouth/data/mappings/elnedyn/leu.charmm36.map'
2023-09-29T23:59:24,088   adding 'vermouth/data/mappings/elnedyn/lys.charmm36.map'
2023-09-29T23:59:24,089   adding 'vermouth/data/mappings/elnedyn/met.charmm36.map'
2023-09-29T23:59:24,091   adding 'vermouth/data/mappings/elnedyn/modifications.elnedyn21.mapping'
2023-09-29T23:59:24,092   adding 'vermouth/data/mappings/elnedyn/modifications.elnedyn22.mapping'
2023-09-29T23:59:24,093   adding 'vermouth/data/mappings/elnedyn/modifications.elnedyn22p.mapping'
2023-09-29T23:59:24,094   adding 'vermouth/data/mappings/elnedyn/phe.charmm36.map'
2023-09-29T23:59:24,096   adding 'vermouth/data/mappings/elnedyn/popc.charmm36.map'
2023-09-29T23:59:24,098   adding 'vermouth/data/mappings/elnedyn/pope.charmm36.map'
2023-09-29T23:59:24,100   adding 'vermouth/data/mappings/elnedyn/popg.charmm36.map'
2023-09-29T23:59:24,101   adding 'vermouth/data/mappings/elnedyn/pops.charmm36.map'
2023-09-29T23:59:24,103   adding 'vermouth/data/mappings/elnedyn/pro.charmm36.map'
2023-09-29T23:59:24,104   adding 'vermouth/data/mappings/elnedyn/ser.charmm36.map'
2023-09-29T23:59:24,105   adding 'vermouth/data/mappings/elnedyn/thr.charmm36.map'
2023-09-29T23:59:24,107   adding 'vermouth/data/mappings/elnedyn/trp.charmm36.map'
2023-09-29T23:59:24,108   adding 'vermouth/data/mappings/elnedyn/tyr.charmm36.map'
2023-09-29T23:59:24,110   adding 'vermouth/data/mappings/elnedyn/val.charmm36.map'
2023-09-29T23:59:24,112   adding 'vermouth/data/mappings/elnedyn/elnedyn22p/arg.charmm36.elnedyn22p.map'
2023-09-29T23:59:24,113   adding 'vermouth/data/mappings/elnedyn/elnedyn22p/asn.charmm36.elnedyn22p.map'
2023-09-29T23:59:24,114   adding 'vermouth/data/mappings/elnedyn/elnedyn22p/asp.charmm36.elnedyn22p.map'
2023-09-29T23:59:24,116   adding 'vermouth/data/mappings/elnedyn/elnedyn22p/gln.charmm36.elnedyn22p.map'
2023-09-29T23:59:24,117   adding 'vermouth/data/mappings/elnedyn/elnedyn22p/glu.charmm36.elnedyn22p.map'
2023-09-29T23:59:24,118   adding 'vermouth/data/mappings/elnedyn/elnedyn22p/lys.charmm36.elnedyn22p.map'
2023-09-29T23:59:24,119   adding 'vermouth/data/mappings/elnedyn/elnedyn22p/ser.charmm36.elnedyn22p.map'
2023-09-29T23:59:24,121   adding 'vermouth/data/mappings/elnedyn/elnedyn22p/thr.charmm36.elnedyn22p.map'
2023-09-29T23:59:24,123   adding 'vermouth/data/mappings/elnedyn21/ala.charmm36.map'
2023-09-29T23:59:24,124   adding 'vermouth/data/mappings/elnedyn21/arg.charmm36.elnedyn22p.map'
2023-09-29T23:59:24,125   adding 'vermouth/data/mappings/elnedyn21/arg.charmm36.map'
2023-09-29T23:59:24,126   adding 'vermouth/data/mappings/elnedyn21/asn.charmm36.elnedyn22p.map'
2023-09-29T23:59:24,128   adding 'vermouth/data/mappings/elnedyn21/asn.charmm36.map'
2023-09-29T23:59:24,129   adding 'vermouth/data/mappings/elnedyn21/asp.charmm36.elnedyn22p.map'
2023-09-29T23:59:24,130   adding 'vermouth/data/mappings/elnedyn21/asp.charmm36.map'
2023-09-29T23:59:24,131   adding 'vermouth/data/mappings/elnedyn21/cys.charmm36.map'
2023-09-29T23:59:24,132   adding 'vermouth/data/mappings/elnedyn21/gln.charmm36.elnedyn22p.map'
2023-09-29T23:59:24,134   adding 'vermouth/data/mappings/elnedyn21/gln.charmm36.map'
2023-09-29T23:59:24,135   adding 'vermouth/data/mappings/elnedyn21/glu.charmm36.elnedyn22p.map'
2023-09-29T23:59:24,136   adding 'vermouth/data/mappings/elnedyn21/glu.charmm36.map'
2023-09-29T23:59:24,138   adding 'vermouth/data/mappings/elnedyn21/gly.charmm36.map'
2023-09-29T23:59:24,139   adding 'vermouth/data/mappings/elnedyn21/his.charmm36.map'
2023-09-29T23:59:24,140   adding 'vermouth/data/mappings/elnedyn21/ile.charmm36.map'
2023-09-29T23:59:24,141   adding 'vermouth/data/mappings/elnedyn21/leu.charmm36.map'
2023-09-29T23:59:24,143   adding 'vermouth/data/mappings/elnedyn21/lys.charmm36.elnedyn22p.map'
2023-09-29T23:59:24,144   adding 'vermouth/data/mappings/elnedyn21/lys.charmm36.map'
2023-09-29T23:59:24,145   adding 'vermouth/data/mappings/elnedyn21/met.charmm36.map'
2023-09-29T23:59:24,147   adding 'vermouth/data/mappings/elnedyn21/modifications.mapping'
2023-09-29T23:59:24,148   adding 'vermouth/data/mappings/elnedyn21/phe.charmm36.map'
2023-09-29T23:59:24,149   adding 'vermouth/data/mappings/elnedyn21/pro.charmm36.map'
2023-09-29T23:59:24,150   adding 'vermouth/data/mappings/elnedyn21/ser.charmm36.elnedyn22p.map'
2023-09-29T23:59:24,152   adding 'vermouth/data/mappings/elnedyn21/ser.charmm36.map'
2023-09-29T23:59:24,153   adding 'vermouth/data/mappings/elnedyn21/thr.charmm36.elnedyn22p.map'
2023-09-29T23:59:24,154   adding 'vermouth/data/mappings/elnedyn21/thr.charmm36.map'
2023-09-29T23:59:24,156   adding 'vermouth/data/mappings/elnedyn21/trp.charmm36.map'
2023-09-29T23:59:24,157   adding 'vermouth/data/mappings/elnedyn21/tyr.charmm36.map'
2023-09-29T23:59:24,158   adding 'vermouth/data/mappings/elnedyn21/val.charmm36.map'
2023-09-29T23:59:24,162   adding 'vermouth/data/mappings/martini3001/ala.amber.map'
2023-09-29T23:59:24,163   adding 'vermouth/data/mappings/martini3001/ala.charmm36.map'
2023-09-29T23:59:24,165   adding 'vermouth/data/mappings/martini3001/antr.charmm36.map'
2023-09-29T23:59:24,166   adding 'vermouth/data/mappings/martini3001/arg.amber.map'
2023-09-29T23:59:24,167   adding 'vermouth/data/mappings/martini3001/arg.charmm36.map'
2023-09-29T23:59:24,169   adding 'vermouth/data/mappings/martini3001/ash.amber.map'
2023-09-29T23:59:24,170   adding 'vermouth/data/mappings/martini3001/asn.amber.map'
2023-09-29T23:59:24,172   adding 'vermouth/data/mappings/martini3001/asn.charmm36.map'
2023-09-29T23:59:24,173   adding 'vermouth/data/mappings/martini3001/asp.amber.map'
2023-09-29T23:59:24,174   adding 'vermouth/data/mappings/martini3001/asp.charmm36.map'
2023-09-29T23:59:24,175   adding 'vermouth/data/mappings/martini3001/aspp.charmm36.map'
2023-09-29T23:59:24,177   adding 'vermouth/data/mappings/martini3001/bald.charmm36.map'
2023-09-29T23:59:24,178   adding 'vermouth/data/mappings/martini3001/benz.charmm36.map'
2023-09-29T23:59:24,179   adding 'vermouth/data/mappings/martini3001/c3.charmm36.map'
2023-09-29T23:59:24,180   adding 'vermouth/data/mappings/martini3001/chxe.charmm36.map'
2023-09-29T23:59:24,181   adding 'vermouth/data/mappings/martini3001/cpen.charmm36.map'
2023-09-29T23:59:24,183   adding 'vermouth/data/mappings/martini3001/cume.charmm36.map'
2023-09-29T23:59:24,184   adding 'vermouth/data/mappings/martini3001/cys.amber.map'
2023-09-29T23:59:24,186   adding 'vermouth/data/mappings/martini3001/cys.charmm36.map'
2023-09-29T23:59:24,187   adding 'vermouth/data/mappings/martini3001/diol.charmm36.map'
2023-09-29T23:59:24,188   adding 'vermouth/data/mappings/martini3001/diox.charmm36.map'
2023-09-29T23:59:24,189   adding 'vermouth/data/mappings/martini3001/dman.charmm36.map'
2023-09-29T23:59:24,190   adding 'vermouth/data/mappings/martini3001/eben.charmm36.map'
2023-09-29T23:59:24,192   adding 'vermouth/data/mappings/martini3001/fura.charmm36.map'
2023-09-29T23:59:24,193   adding 'vermouth/data/mappings/martini3001/glh.amber.map'
2023-09-29T23:59:24,194   adding 'vermouth/data/mappings/martini3001/gln.amber.map'
2023-09-29T23:59:24,195   adding 'vermouth/data/mappings/martini3001/gln.charmm36.map'
2023-09-29T23:59:24,197   adding 'vermouth/data/mappings/martini3001/glu.amber.map'
2023-09-29T23:59:24,198   adding 'vermouth/data/mappings/martini3001/glu.charmm36.map'
2023-09-29T23:59:24,199   adding 'vermouth/data/mappings/martini3001/glup.charmm36.map'
2023-09-29T23:59:24,201   adding 'vermouth/data/mappings/martini3001/gly.amber.map'
2023-09-29T23:59:24,202   adding 'vermouth/data/mappings/martini3001/gly.charmm36.map'
2023-09-29T23:59:24,203   adding 'vermouth/data/mappings/martini3001/hid.amber.map'
2023-09-29T23:59:24,204   adding 'vermouth/data/mappings/martini3001/hie.amber.map'
2023-09-29T23:59:24,206   adding 'vermouth/data/mappings/martini3001/hip.amber.map'
2023-09-29T23:59:24,207   adding 'vermouth/data/mappings/martini3001/his.amber.map'
2023-09-29T23:59:24,208   adding 'vermouth/data/mappings/martini3001/his.charmm36.map'
2023-09-29T23:59:24,210   adding 'vermouth/data/mappings/martini3001/hsd.charmm36.map'
2023-09-29T23:59:24,211   adding 'vermouth/data/mappings/martini3001/hse.charmm36.map'
2023-09-29T23:59:24,213   adding 'vermouth/data/mappings/martini3001/hsp.charmm36.map'
2023-09-29T23:59:24,214   adding 'vermouth/data/mappings/martini3001/ile.amber.map'
2023-09-29T23:59:24,215   adding 'vermouth/data/mappings/martini3001/ile.charmm36.map'
2023-09-29T23:59:24,217   adding 'vermouth/data/mappings/martini3001/imia.charmm36.map'
2023-09-29T23:59:24,218   adding 'vermouth/data/mappings/martini3001/inda.charmm36.map'
2023-09-29T23:59:24,219   adding 'vermouth/data/mappings/martini3001/indo.charmm36.map'
2023-09-29T23:59:24,221   adding 'vermouth/data/mappings/martini3001/leu.amber.map'
2023-09-29T23:59:24,222   adding 'vermouth/data/mappings/martini3001/leu.charmm36.map'
2023-09-29T23:59:24,223   adding 'vermouth/data/mappings/martini3001/lsn.charmm36.map'
2023-09-29T23:59:24,225   adding 'vermouth/data/mappings/martini3001/lyn.amber.map'
2023-09-29T23:59:24,226   adding 'vermouth/data/mappings/martini3001/lys.amber.map'
2023-09-29T23:59:24,227   adding 'vermouth/data/mappings/martini3001/lys.charmm36.map'
2023-09-29T23:59:24,229   adding 'vermouth/data/mappings/martini3001/mboa.charmm36.map'
2023-09-29T23:59:24,230   adding 'vermouth/data/mappings/martini3001/mcpe.charmm36.map'
2023-09-29T23:59:24,231   adding 'vermouth/data/mappings/martini3001/meob.charmm36.map'
2023-09-29T23:59:24,233   adding 'vermouth/data/mappings/martini3001/met.amber.map'
2023-09-29T23:59:24,234   adding 'vermouth/data/mappings/martini3001/met.charmm36.map'
2023-09-29T23:59:24,235   adding 'vermouth/data/mappings/martini3001/mind.charmm36.map'
2023-09-29T23:59:24,236   adding 'vermouth/data/mappings/martini3001/modifications.amber.mapping'
2023-09-29T23:59:24,237   adding 'vermouth/data/mappings/martini3001/modifications.charmm36.mapping'
2023-09-29T23:59:24,239   adding 'vermouth/data/mappings/martini3001/mxyl.charmm36.map'
2023-09-29T23:59:24,240   adding 'vermouth/data/mappings/martini3001/naft.charmm36.map'
2023-09-29T23:59:24,241   adding 'vermouth/data/mappings/martini3001/nitb.charmm36.map'
2023-09-29T23:59:24,242   adding 'vermouth/data/mappings/martini3001/oxyl.charmm36.map'
2023-09-29T23:59:24,243   adding 'vermouth/data/mappings/martini3001/pcro.charmm36.map'
2023-09-29T23:59:24,244   adding 'vermouth/data/mappings/martini3001/phe.amber.map'
2023-09-29T23:59:24,245   adding 'vermouth/data/mappings/martini3001/phe.charmm36.map'
2023-09-29T23:59:24,246   adding 'vermouth/data/mappings/martini3001/phen.charmm36.map'
2023-09-29T23:59:24,247   adding 'vermouth/data/mappings/martini3001/phmk.charmm36.map'
2023-09-29T23:59:24,249   adding 'vermouth/data/mappings/martini3001/prld.charmm36.map'
2023-09-29T23:59:24,250   adding 'vermouth/data/mappings/martini3001/pro.amber.map'
2023-09-29T23:59:24,251   adding 'vermouth/data/mappings/martini3001/pro.charmm36.map'
2023-09-29T23:59:24,252   adding 'vermouth/data/mappings/martini3001/pxyl.charmm36.map'
2023-09-29T23:59:24,253   adding 'vermouth/data/mappings/martini3001/pyr1.charmm36.map'
2023-09-29T23:59:24,255   adding 'vermouth/data/mappings/martini3001/pyrd.charmm36.map'
2023-09-29T23:59:24,256   adding 'vermouth/data/mappings/martini3001/pyrl.charmm36.map'
2023-09-29T23:59:24,257   adding 'vermouth/data/mappings/martini3001/pyrm.charmm36.map'
2023-09-29T23:59:24,258   adding 'vermouth/data/mappings/martini3001/qinl.charmm36.map'
2023-09-29T23:59:24,259   adding 'vermouth/data/mappings/martini3001/ser.amber.map'
2023-09-29T23:59:24,261   adding 'vermouth/data/mappings/martini3001/ser.charmm36.map'
2023-09-29T23:59:24,262   adding 'vermouth/data/mappings/martini3001/sm139.charmm36.map'
2023-09-29T23:59:24,263   adding 'vermouth/data/mappings/martini3001/styr.charmm36.map'
2023-09-29T23:59:24,264   adding 'vermouth/data/mappings/martini3001/thaz.charmm36.map'
2023-09-29T23:59:24,266   adding 'vermouth/data/mappings/martini3001/thf.charmm36.map'
2023-09-29T23:59:24,267   adding 'vermouth/data/mappings/martini3001/thip.charmm36.map'
2023-09-29T23:59:24,268   adding 'vermouth/data/mappings/martini3001/thp.charmm36.map'
2023-09-29T23:59:24,269   adding 'vermouth/data/mappings/martini3001/thr.amber.map'
2023-09-29T23:59:24,271   adding 'vermouth/data/mappings/martini3001/thr.charmm36.map'
2023-09-29T23:59:24,272   adding 'vermouth/data/mappings/martini3001/tolu.charmm36.map'
2023-09-29T23:59:24,273   adding 'vermouth/data/mappings/martini3001/trp.amber.map'
2023-09-29T23:59:24,275   adding 'vermouth/data/mappings/martini3001/trp.charmm36.map'
2023-09-29T23:59:24,276   adding 'vermouth/data/mappings/martini3001/tyr.amber.map'
2023-09-29T23:59:24,278   adding 'vermouth/data/mappings/martini3001/tyr.charmm36.map'
2023-09-29T23:59:24,279   adding 'vermouth/data/mappings/martini3001/val.amber.map'
2023-09-29T23:59:24,281   adding 'vermouth/data/mappings/martini3001/val.charmm36.map'
2023-09-29T23:59:24,282   adding 'vermouth/data/mappings/martini3001/zimi.charmm36.map'
2023-09-29T23:59:24,283   adding 'vermouth/data/mappings/martini3001/zthp.charmm36.map'
2023-09-29T23:59:24,285   adding 'vermouth/data/mappings/martini3001/zthz.charmm36.map'
2023-09-29T23:59:24,287   adding 'vermouth/data/mappings/martini30b32/ala.charmm36.map'
2023-09-29T23:59:24,288   adding 'vermouth/data/mappings/martini30b32/arg.charmm36.map'
2023-09-29T23:59:24,290   adding 'vermouth/data/mappings/martini30b32/asn.charmm36.map'
2023-09-29T23:59:24,291   adding 'vermouth/data/mappings/martini30b32/asp.charmm36.map'
2023-09-29T23:59:24,292   adding 'vermouth/data/mappings/martini30b32/benz.charmm36.map'
2023-09-29T23:59:24,294   adding 'vermouth/data/mappings/martini30b32/cys.charmm36.map'
2023-09-29T23:59:24,295   adding 'vermouth/data/mappings/martini30b32/gln.charmm36.map'
2023-09-29T23:59:24,296   adding 'vermouth/data/mappings/martini30b32/glu.charmm36.map'
2023-09-29T23:59:24,297   adding 'vermouth/data/mappings/martini30b32/gly.charmm36.map'
2023-09-29T23:59:24,298   adding 'vermouth/data/mappings/martini30b32/his.charmm36.map'
2023-09-29T23:59:24,300   adding 'vermouth/data/mappings/martini30b32/hsd.charmm36.map'
2023-09-29T23:59:24,301   adding 'vermouth/data/mappings/martini30b32/ile.charmm36.map'
2023-09-29T23:59:24,302   adding 'vermouth/data/mappings/martini30b32/leu.charmm36.map'
2023-09-29T23:59:24,304   adding 'vermouth/data/mappings/martini30b32/lys.charmm36.map'
2023-09-29T23:59:24,305   adding 'vermouth/data/mappings/martini30b32/met.charmm36.map'
2023-09-29T23:59:24,306   adding 'vermouth/data/mappings/martini30b32/modifications.mapping'
2023-09-29T23:59:24,308   adding 'vermouth/data/mappings/martini30b32/phe.charmm36.map'
2023-09-29T23:59:24,309   adding 'vermouth/data/mappings/martini30b32/pro.charmm36.map'
2023-09-29T23:59:24,310   adding 'vermouth/data/mappings/martini30b32/ser.charmm36.map'
2023-09-29T23:59:24,311   adding 'vermouth/data/mappings/martini30b32/thr.charmm36.map'
2023-09-29T23:59:24,313   adding 'vermouth/data/mappings/martini30b32/trp.charmm36.map'
2023-09-29T23:59:24,314   adding 'vermouth/data/mappings/martini30b32/tyr.charmm36.map'
2023-09-29T23:59:24,315   adding 'vermouth/data/mappings/martini30b32/val.charmm36.map'
2023-09-29T23:59:24,317   adding 'vermouth/dssp/__init__.py'
2023-09-29T23:59:24,320   adding 'vermouth/dssp/dssp.py'
2023-09-29T23:59:24,322   adding 'vermouth/gmx/__init__.py'
2023-09-29T23:59:24,324   adding 'vermouth/gmx/gro.py'
2023-09-29T23:59:24,326   adding 'vermouth/gmx/itp.py'
2023-09-29T23:59:24,329   adding 'vermouth/gmx/itp_read.py'
2023-09-29T23:59:24,332   adding 'vermouth/gmx/rtp.py'
2023-09-29T23:59:24,334   adding 'vermouth/graphing/grappa.py'
2023-09-29T23:59:24,336   adding 'vermouth/pdb/__init__.py'
2023-09-29T23:59:24,339   adding 'vermouth/pdb/pdb.py'
2023-09-29T23:59:24,342   adding 'vermouth/processors/__init__.py'
2023-09-29T23:59:24,343   adding 'vermouth/processors/add_molecule_edges.py'
2023-09-29T23:59:24,345   adding 'vermouth/processors/annotate_mut_mod.py'
2023-09-29T23:59:24,346   adding 'vermouth/processors/apply_posres.py'
2023-09-29T23:59:24,349   adding 'vermouth/processors/apply_rubber_band.py'
2023-09-29T23:59:24,351   adding 'vermouth/processors/attach_mass.py'
2023-09-29T23:59:24,353   adding 'vermouth/processors/average_beads.py'
2023-09-29T23:59:24,355   adding 'vermouth/processors/canonicalize_modifications.py'
2023-09-29T23:59:24,357   adding 'vermouth/processors/do_links.py'
2023-09-29T23:59:24,362   adding 'vermouth/processors/do_mapping.py'
2023-09-29T23:59:24,364   adding 'vermouth/processors/go_vs_includes.py'
2023-09-29T23:59:24,366   adding 'vermouth/processors/gro_reader.py'
2023-09-29T23:59:24,367   adding 'vermouth/processors/locate_charge_dummies.py'
2023-09-29T23:59:24,370   adding 'vermouth/processors/make_bonds.py'
2023-09-29T23:59:24,371   adding 'vermouth/processors/merge_all_molecules.py'
2023-09-29T23:59:24,372   adding 'vermouth/processors/merge_chains.py'
2023-09-29T23:59:24,374   adding 'vermouth/processors/name_moltype.py'
2023-09-29T23:59:24,375   adding 'vermouth/processors/pdb_reader.py'
2023-09-29T23:59:24,377   adding 'vermouth/processors/processor.py'
2023-09-29T23:59:24,378   adding 'vermouth/processors/quote.py'
2023-09-29T23:59:24,380   adding 'vermouth/processors/rename_modified_residues.py'
2023-09-29T23:59:24,383   adding 'vermouth/processors/repair_graph.py'
2023-09-29T23:59:24,385   adding 'vermouth/processors/set_molecule_meta.py'
2023-09-29T23:59:24,386   adding 'vermouth/processors/sort_molecule_atoms.py'
2023-09-29T23:59:24,388   adding 'vermouth/processors/tune_cystein_bridges.py'
2023-09-29T23:59:24,390   adding 'vermouth/tests/__init__.py'
2023-09-29T23:59:24,391   adding 'vermouth/tests/datafiles.py'
2023-09-29T23:59:24,393   adding 'vermouth/tests/helper_functions.py'
2023-09-29T23:59:24,395   adding 'vermouth/tests/molecule_strategies.py'
2023-09-29T23:59:24,396   adding 'vermouth/tests/test_add_molecule_edges.py'
2023-09-29T23:59:24,398   adding 'vermouth/tests/test_annotate_mut_mod.py'
2023-09-29T23:59:24,400   adding 'vermouth/tests/test_apply_rubber_band.py'
2023-09-29T23:59:24,402   adding 'vermouth/tests/test_average_beads.py'
2023-09-29T23:59:24,405   adding 'vermouth/tests/test_do_mapping.py'
2023-09-29T23:59:24,408   adding 'vermouth/tests/test_dssp.py'
2023-09-29T23:59:24,410   adding 'vermouth/tests/test_edge_tuning.py'
2023-09-29T23:59:24,414   adding 'vermouth/tests/test_ff_files.py'
2023-09-29T23:59:24,417   adding 'vermouth/tests/test_ffinput.py'
2023-09-29T23:59:24,419   adding 'vermouth/tests/test_file_writer.py'
2023-09-29T23:59:24,420   adding 'vermouth/tests/test_forcefield.py'
2023-09-29T23:59:24,422   adding 'vermouth/tests/test_geometry.py'
2023-09-29T23:59:24,424   adding 'vermouth/tests/test_go_vs_includes.py'
2023-09-29T23:59:24,426   adding 'vermouth/tests/test_graph_utils.py'
2023-09-29T23:59:24,428   adding 'vermouth/tests/test_grappa.py'
2023-09-29T23:59:24,430   adding 'vermouth/tests/test_ismags.py'
2023-09-29T23:59:24,433   adding 'vermouth/tests/test_itp_files.py'
2023-09-29T23:59:24,435   adding 'vermouth/tests/test_links.py'
2023-09-29T23:59:24,437   adding 'vermouth/tests/test_logging.py'
2023-09-29T23:59:24,438   adding 'vermouth/tests/test_make_bonds.py'
2023-09-29T23:59:24,441   adding 'vermouth/tests/test_map_input.py'
2023-09-29T23:59:24,443   adding 'vermouth/tests/test_map_parser.py'
2023-09-29T23:59:24,445   adding 'vermouth/tests/test_mapping_integrative.py'
2023-09-29T23:59:24,449   adding 'vermouth/tests/test_molecule.py'
2023-09-29T23:59:24,451   adding 'vermouth/tests/test_name_moltype.py'
2023-09-29T23:59:24,453   adding 'vermouth/tests/test_native_forcefield.py'
2023-09-29T23:59:24,454   adding 'vermouth/tests/test_ptm_detection.py'
2023-09-29T23:59:24,457   adding 'vermouth/tests/test_repair_graph.py'
2023-09-29T23:59:24,458   adding 'vermouth/tests/test_section_parser.py'
2023-09-29T23:59:24,460   adding 'vermouth/tests/test_selectors.py'
2023-09-29T23:59:24,461   adding 'vermouth/tests/test_set_molecule_meta.py'
2023-09-29T23:59:24,463   adding 'vermouth/tests/test_sort_molecule_atoms.py'
2023-09-29T23:59:24,464   adding 'vermouth/tests/test_tune_cystein_bridges.py'
2023-09-29T23:59:24,466   adding 'vermouth/tests/test_utils.py'
2023-09-29T23:59:24,467   adding 'vermouth/tests/test_version.py'
2023-09-29T23:59:24,489   adding 'vermouth/tests/data/1bta.pdb'
2023-09-29T23:59:24,511   adding 'vermouth/tests/data/1bta_mutated.pdb'
2023-09-29T23:59:24,576   adding 'vermouth/tests/data/2QWO.pdb'
2023-09-29T23:59:24,719   adding 'vermouth/tests/data/2dn2.pdb'
2023-09-29T23:59:25,256   adding 'vermouth/tests/data/6E8W.pdb'
2023-09-29T23:59:25,284   adding 'vermouth/tests/data/ala5.pdb'
2023-09-29T23:59:25,285   adding 'vermouth/tests/data/ala5_cg.pdb'
2023-09-29T23:59:25,287   adding 'vermouth/tests/data/dna-short.pdb'
2023-09-29T23:59:25,289   adding 'vermouth/tests/data/heme.pdb'
2023-09-29T23:59:25,290   adding 'vermouth/tests/data/tri_alanine.pdb'
2023-09-29T23:59:25,294   adding 'vermouth/tests/data/dssp_tests/dssp_1bta.ssd'
2023-09-29T23:59:25,296   adding 'vermouth/tests/data/dssp_tests/mini-protein1_betasheet.pdb.v2.2.1-3b2-deb_cv1.ssd'
2023-09-29T23:59:25,298   adding 'vermouth/tests/data/dssp_tests/mini-protein1_betasheet.pdb.v3.0.0-3b1-deb_cv1.ssd'
2023-09-29T23:59:25,300   adding 'vermouth/tests/data/dssp_tests/mini-protein2_helix.pdb.v2.2.1-3b2-deb_cv1.ssd'
2023-09-29T23:59:25,302   adding 'vermouth/tests/data/dssp_tests/mini-protein2_helix.pdb.v3.0.0-3b1-deb_cv1.ssd'
2023-09-29T23:59:25,304   adding 'vermouth/tests/data/dssp_tests/mini-protein3_trp-cage.pdb.v2.2.1-3b2-deb_cv1.ssd'
2023-09-29T23:59:25,306   adding 'vermouth/tests/data/dssp_tests/mini-protein3_trp-cage.pdb.v3.0.0-3b1-deb_cv1.ssd'
2023-09-29T23:59:25,309   adding 'vermouth/tests/data/force_fields/martini-test/aminoacids.ff'
2023-09-29T23:59:25,311   adding 'vermouth/tests/data/force_fields/pepplane/ala.ff'
2023-09-29T23:59:25,312   adding 'vermouth/tests/data/force_fields/pepplane/general.ff'
2023-09-29T23:59:25,313   adding 'vermouth/tests/data/force_fields/pepplane/modifications.ff'
2023-09-29T23:59:25,318   adding 'vermouth/tests/data/force_fields/universal-test/aminoacids.rtp'
2023-09-29T23:59:25,319   adding 'vermouth/tests/data/force_fields/universal-test/modifications.ff'
2023-09-29T23:59:25,322   adding 'vermouth/tests/data/integration_tests/tier-0/dipro-termini/README'
2023-09-29T23:59:25,323   adding 'vermouth/tests/data/integration_tests/tier-0/dipro-termini/aa.pdb'
2023-09-29T23:59:25,325   adding 'vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2/cg.pdb'
2023-09-29T23:59:25,326   adding 'vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2/citation'
2023-09-29T23:59:25,328   adding 'vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2/command'
2023-09-29T23:59:25,329   adding 'vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2/molecule_0.itp'
2023-09-29T23:59:25,330   adding 'vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2/topol.top'
2023-09-29T23:59:25,332   adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/README'
2023-09-29T23:59:25,337   adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/aa.pdb'
2023-09-29T23:59:25,340   adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/cg.pdb'
2023-09-29T23:59:25,342   adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/chain_A.ssd'
2023-09-29T23:59:25,343   adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/citation'
2023-09-29T23:59:25,344   adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/command'
2023-09-29T23:59:25,346   adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/molecule_0.itp'
2023-09-29T23:59:25,347   adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/screen.output'
2023-09-29T23:59:25,348   adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/topol.top'
2023-09-29T23:59:25,350   adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/README'
2023-09-29T23:59:25,359   adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/aa.pdb'
2023-09-29T23:59:25,362   adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/cg.pdb'
2023-09-29T23:59:25,364   adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/chain_A.ssd'
2023-09-29T23:59:25,365   adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/citation'
2023-09-29T23:59:25,366   adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/command'
2023-09-29T23:59:25,369   adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/molecule_0.itp'
2023-09-29T23:59:25,370   adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/screen.output'
2023-09-29T23:59:25,371   adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/topol.top'
2023-09-29T23:59:25,373   adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/README'
2023-09-29T23:59:25,377   adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/aa.pdb'
2023-09-29T23:59:25,379   adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/cg.pdb'
2023-09-29T23:59:25,381   adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/chain_A.ssd'
2023-09-29T23:59:25,383   adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/citation'
2023-09-29T23:59:25,384   adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/command'
2023-09-29T23:59:25,386   adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/molecule_0.itp'
2023-09-29T23:59:25,387   adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/screen.output'
2023-09-29T23:59:25,388   adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/topol.top'
2023-09-29T23:59:25,390   adding 'vermouth/tests/data/integration_tests/tier-1/1mj5/README'
2023-09-29T23:59:25,458   adding 'vermouth/tests/data/integration_tests/tier-1/1mj5/aa.pdb'
2023-09-29T23:59:25,471   adding 'vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/cg.pdb'
2023-09-29T23:59:25,473   adding 'vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/cg.top'
2023-09-29T23:59:25,483   adding 'vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/chain_.ssd'
2023-09-29T23:59:25,485   adding 'vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/citation'
2023-09-29T23:59:25,486   adding 'vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/command'
2023-09-29T23:59:25,506   adding 'vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/molecule_0.itp'
2023-09-29T23:59:25,509   adding 'vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/screen.output'
2023-09-29T23:59:25,511   adding 'vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/README'
2023-09-29T23:59:25,574   adding 'vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/aa.pdb'
2023-09-29T23:59:25,588   adding 'vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/cg.pdb'
2023-09-29T23:59:25,589   adding 'vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/cg.top'
2023-09-29T23:59:25,600   adding 'vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/chain_.ssd'
2023-09-29T23:59:25,602   adding 'vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/citation'
2023-09-29T23:59:25,603   adding 'vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/command'
2023-09-29T23:59:25,623   adding 'vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/molecule_0.itp'
2023-09-29T23:59:25,625   adding 'vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/screen.output'
2023-09-29T23:59:25,635   adding 'vermouth/tests/data/integration_tests/tier-1/3i40/3i40.pdb'
2023-09-29T23:59:25,636   adding 'vermouth/tests/data/integration_tests/tier-1/3i40/README'
2023-09-29T23:59:25,639   adding 'vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/cg.pdb'
2023-09-29T23:59:25,640   adding 'vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/cg.top'
2023-09-29T23:59:25,643   adding 'vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/chain_A.ssd'
2023-09-29T23:59:25,645   adding 'vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/chain_C.ssd'
2023-09-29T23:59:25,646   adding 'vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/citation'
2023-09-29T23:59:25,648   adding 'vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/command'
2023-09-29T23:59:25,651   adding 'vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/insulin_dimer.itp'
2023-09-29T23:59:25,654   adding 'vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/molecule_0.itp'
2023-09-29T23:59:25,656   adding 'vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/screen.output'
2023-09-29T23:59:25,685   adding 'vermouth/tests/data/integration_tests/tier-1/6LFO_gap/6LFO_gap.pdb'
2023-09-29T23:59:25,688   adding 'vermouth/tests/data/integration_tests/tier-1/6LFO_gap/README'
2023-09-29T23:59:25,696   adding 'vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/cg.pdb'
2023-09-29T23:59:25,698   adding 'vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/cg.top'
2023-09-29T23:59:25,700   adding 'vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/chain_R.ssd'
2023-09-29T23:59:25,702   adding 'vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/citation'
2023-09-29T23:59:25,703   adding 'vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/command'
2023-09-29T23:59:25,720   adding 'vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/molecule_0.itp'
2023-09-29T23:59:25,722   adding 'vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/screen.output'
2023-09-29T23:59:25,724   adding 'vermouth/tests/data/integration_tests/tier-1/EN_chain/README'
2023-09-29T23:59:25,733   adding 'vermouth/tests/data/integration_tests/tier-1/EN_chain/aa.pdb'
2023-09-29T23:59:25,736   adding 'vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/cg.pdb'
2023-09-29T23:59:25,737   adding 'vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/cg.top'
2023-09-29T23:59:25,740   adding 'vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/chain_A.ssd'
2023-09-29T23:59:25,741   adding 'vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/citation'
2023-09-29T23:59:25,742   adding 'vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/command'
2023-09-29T23:59:25,746   adding 'vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/molecule_0.itp'
2023-09-29T23:59:25,748   adding 'vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/screen.output'
2023-09-29T23:59:25,749   adding 'vermouth/tests/data/integration_tests/tier-1/EN_region/README'
2023-09-29T23:59:25,758   adding 'vermouth/tests/data/integration_tests/tier-1/EN_region/aa.pdb'
2023-09-29T23:59:25,762   adding 'vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/cg.pdb'
2023-09-29T23:59:25,763   adding 'vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/cg.top'
2023-09-29T23:59:25,766   adding 'vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/chain_A.ssd'
2023-09-29T23:59:25,767   adding 'vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/citation'
2023-09-29T23:59:25,768   adding 'vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/command'
2023-09-29T23:59:25,772   adding 'vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/molecule_0.itp'
2023-09-29T23:59:25,773   adding 'vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/screen.output'
2023-09-29T23:59:25,775   adding 'vermouth/tests/data/integration_tests/tier-1/bpti/README'
2023-09-29T23:59:25,785   adding 'vermouth/tests/data/integration_tests/tier-1/bpti/aa.pdb'
2023-09-29T23:59:25,789   adding 'vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/cg.pdb'
2023-09-29T23:59:25,792   adding 'vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/chain_A.ssd'
2023-09-29T23:59:25,793   adding 'vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/citation'
2023-09-29T23:59:25,794   adding 'vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/command'
2023-09-29T23:59:25,798   adding 'vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/molecule_0.itp'
2023-09-29T23:59:25,800   adding 'vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/screen.output'
2023-09-29T23:59:25,802   adding 'vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/topol.top'
2023-09-29T23:59:25,803   adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme/README'
2023-09-29T23:59:25,823   adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme/aa.pdb'
2023-09-29T23:59:25,829   adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/cg.pdb'
2023-09-29T23:59:25,834   adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/chain_A.ssd'
2023-09-29T23:59:25,836   adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/citation'
2023-09-29T23:59:25,837   adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/command'
2023-09-29T23:59:25,845   adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/molecule_0.itp'
2023-09-29T23:59:25,848   adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/screen.output'
2023-09-29T23:59:25,856   adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/test.itp'
2023-09-29T23:59:25,857   adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/topol.top'
2023-09-29T23:59:25,859   adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/README'
2023-09-29T23:59:25,879   adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/aa.pdb'
2023-09-29T23:59:25,884   adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/cg.pdb'
2023-09-29T23:59:25,889   adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/chain_A.ssd'
2023-09-29T23:59:25,898   adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/molecule_0.itp'
2023-09-29T23:59:25,899   adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/topol.top'
2023-09-29T23:59:25,904   adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/cg.pdb'
2023-09-29T23:59:25,909   adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/chain_A.ssd'
2023-09-29T23:59:25,910   adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/citation'
2023-09-29T23:59:25,911   adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/command'
2023-09-29T23:59:25,920   adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/molecule_0.itp'
2023-09-29T23:59:25,922   adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/screen.output'
2023-09-29T23:59:25,930   adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/test.itp'
2023-09-29T23:59:25,931   adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/topol.top'
2023-09-29T23:59:25,933   adding 'vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/README'
2023-09-29T23:59:25,957   adding 'vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/input.pdb'
2023-09-29T23:59:25,964   adding 'vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2/cg.pdb'
2023-09-29T23:59:25,966   adding 'vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2/cg.top'
2023-09-29T23:59:25,970   adding 'vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2/chain_.ssd'
2023-09-29T23:59:25,972   adding 'vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2/citation'
2023-09-29T23:59:25,973   adding 'vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2/command'
2023-09-29T23:59:25,982   adding 'vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2/molecule_0.itp'
2023-09-29T23:59:25,984   adding 'vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2/screen.output'
2023-09-29T23:59:25,985   adding 'vermouth/tests/data/integration_tests/tier-1/prot_modf_charmm/martinize2/sys.top'
2023-09-29T23:59:25,987   adding 'vermouth/tests/data/integration_tests/tier-1/villin/README'
2023-09-29T23:59:25,991   adding 'vermouth/tests/data/integration_tests/tier-1/villin/aa.pdb'
2023-09-29T23:59:25,994   adding 'vermouth/tests/data/integration_tests/tier-1/villin/martinize2/cg.pdb'
2023-09-29T23:59:25,996   adding 'vermouth/tests/data/integration_tests/tier-1/villin/martinize2/citation'
2023-09-29T23:59:25,997   adding 'vermouth/tests/data/integration_tests/tier-1/villin/martinize2/command'
2023-09-29T23:59:25,999   adding 'vermouth/tests/data/integration_tests/tier-1/villin/martinize2/molecule_0.itp'
2023-09-29T23:59:26,001   adding 'vermouth/tests/data/integration_tests/tier-1/villin/martinize2/screen.output'
2023-09-29T23:59:26,003   adding 'vermouth/tests/data/integration_tests/tier-1/villin/martinize2/topol.top'
2023-09-29T23:59:26,006   adding 'vermouth/tests/data/mappings/universal-test/martini-test/ser.mapping'
2023-09-29T23:59:26,007   adding 'vermouth/tests/data/mappings/universal-test/pepplane/ala.mapping'
2023-09-29T23:59:26,009   adding 'vermouth/tests/data/mappings/universal-test/pepplane/modifications.mapping'
2023-09-29T23:59:26,015   adding 'vermouth/tests/gmx/test_gro.py'
2023-09-29T23:59:26,016   adding 'vermouth/tests/gmx/test_itp.py'
2023-09-29T23:59:26,018   adding 'vermouth/tests/integration_tests/__init__.py'
2023-09-29T23:59:26,020   adding 'vermouth/tests/integration_tests/test_integration.py'
2023-09-29T23:59:26,023   adding 'vermouth/tests/pdb/test_read_pdb.py'
2023-09-29T23:59:26,024   adding 'vermouth/tests/pdb/test_write_pdb.py'
2023-09-29T23:59:26,030   adding 'vermouth-0.9.5.data/scripts/martinize2'
2023-09-29T23:59:26,034   adding 'vermouth-0.9.5.dist-info/LICENSE'
2023-09-29T23:59:26,035   adding 'vermouth-0.9.5.dist-info/METADATA'
2023-09-29T23:59:26,037   adding 'vermouth-0.9.5.dist-info/WHEEL'
2023-09-29T23:59:26,038   adding 'vermouth-0.9.5.dist-info/pbr.json'
2023-09-29T23:59:26,040   adding 'vermouth-0.9.5.dist-info/top_level.txt'
2023-09-29T23:59:26,051   adding 'vermouth-0.9.5.dist-info/RECORD'
2023-09-29T23:59:26,090   removing build/bdist.linux-armv7l/wheel
2023-09-29T23:59:26,405   Building wheel for vermouth (pyproject.toml): finished with status 'done'
2023-09-29T23:59:26,474   Created wheel for vermouth: filename=vermouth-0.9.5-py2.py3-none-any.whl size=2767039 sha256=b59fbef1a8f42539625f80181897a6bab10ab1aa9dd00a8ced5bcd6a5e9090ab
2023-09-29T23:59:26,475   Stored in directory: /tmp/pip-ephem-wheel-cache-npug3kks/wheels/43/31/2a/24ea82d65c81292a8e133292555b93c9ef7f0fc77b14e5b4fa
2023-09-29T23:59:26,522 Successfully built vermouth
2023-09-29T23:59:26,605 Removed build tracker: '/tmp/pip-build-tracker-8t_fdfg0'