2023-09-30T00:16:52,549 Created temporary directory: /tmp/pip-build-tracker-pp78gc8z 2023-09-30T00:16:52,550 Initialized build tracking at /tmp/pip-build-tracker-pp78gc8z 2023-09-30T00:16:52,550 Created build tracker: /tmp/pip-build-tracker-pp78gc8z 2023-09-30T00:16:52,551 Entered build tracker: /tmp/pip-build-tracker-pp78gc8z 2023-09-30T00:16:52,552 Created temporary directory: /tmp/pip-wheel-f566sors 2023-09-30T00:16:52,555 Created temporary directory: /tmp/pip-ephem-wheel-cache-tvbb0zvt 2023-09-30T00:16:52,578 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-30T00:16:52,582 2 location(s) to search for versions of nnunetv2: 2023-09-30T00:16:52,582 * https://pypi.org/simple/nnunetv2/ 2023-09-30T00:16:52,582 * https://www.piwheels.org/simple/nnunetv2/ 2023-09-30T00:16:52,583 Fetching project page and analyzing links: https://pypi.org/simple/nnunetv2/ 2023-09-30T00:16:52,584 Getting page https://pypi.org/simple/nnunetv2/ 2023-09-30T00:16:52,585 Found index url https://pypi.org/simple/ 2023-09-30T00:16:52,801 Fetched page https://pypi.org/simple/nnunetv2/ as application/vnd.pypi.simple.v1+json 2023-09-30T00:16:52,803 Found link https://files.pythonhosted.org/packages/e9/76/b07d94295b8680333c267420cb8fe68780c1f0330b01f83de221e14398f8/nnunetv2-2.0.tar.gz (from https://pypi.org/simple/nnunetv2/), version: 2.0 2023-09-30T00:16:52,804 Found link https://files.pythonhosted.org/packages/ec/d6/1db7ccf9b55e60ef9f1201ce7086b69dc87e4a0ace0a9779d7763097ff4f/nnunetv2-2.1.tar.gz (from https://pypi.org/simple/nnunetv2/) (requires-python:>=3.9), version: 2.1 2023-09-30T00:16:52,805 Found link https://files.pythonhosted.org/packages/75/0c/970bded1a4462ac6dfe97aaa8cfe2ae96e24597d26da6a3d7be829832bb3/nnunetv2-2.1.2.tar.gz (from https://pypi.org/simple/nnunetv2/) (requires-python:>=3.9), version: 2.1.2 2023-09-30T00:16:52,806 Found link https://files.pythonhosted.org/packages/23/ec/d5a80410ed705da963c4df59ae27bea4d28ca2861949275751c2087706c2/nnunetv2-2.2.tar.gz (from https://pypi.org/simple/nnunetv2/) (requires-python:>=3.9), version: 2.2 2023-09-30T00:16:52,807 Fetching project page and analyzing links: https://www.piwheels.org/simple/nnunetv2/ 2023-09-30T00:16:52,808 Getting page https://www.piwheels.org/simple/nnunetv2/ 2023-09-30T00:16:52,809 Found index url https://www.piwheels.org/simple/ 2023-09-30T00:16:52,977 Fetched page https://www.piwheels.org/simple/nnunetv2/ as text/html 2023-09-30T00:16:52,979 Skipping link: No binaries permitted for nnunetv2: https://www.piwheels.org/simple/nnunetv2/nnunetv2-2.1-py3-none-any.whl#sha256=1aaa6b18e813f011d50ac92dd2b1a35512438d54a3dd7d63dc8dee150c5ab3ee (from https://www.piwheels.org/simple/nnunetv2/) (requires-python:>=3.9) 2023-09-30T00:16:52,980 Skipping link: No binaries permitted for nnunetv2: https://www.piwheels.org/simple/nnunetv2/nnunetv2-2.0-py3-none-any.whl#sha256=fdacc5b6c5ae86113368c37f25e21643894052a24c65235ffff6c37a0d1a7b31 (from https://www.piwheels.org/simple/nnunetv2/) 2023-09-30T00:16:52,980 Skipping link: not a file: https://www.piwheels.org/simple/nnunetv2/ 2023-09-30T00:16:52,981 Skipping link: not a file: https://pypi.org/simple/nnunetv2/ 2023-09-30T00:16:53,000 Given no hashes to check 1 links for project 'nnunetv2': discarding no candidates 2023-09-30T00:16:53,018 Collecting nnunetv2==2.1.2 2023-09-30T00:16:53,020 Created temporary directory: /tmp/pip-unpack-oa6xs26o 2023-09-30T00:16:53,232 Downloading nnunetv2-2.1.2.tar.gz (178 kB) 2023-09-30T00:16:53,624 Added nnunetv2==2.1.2 from https://files.pythonhosted.org/packages/75/0c/970bded1a4462ac6dfe97aaa8cfe2ae96e24597d26da6a3d7be829832bb3/nnunetv2-2.1.2.tar.gz to build tracker '/tmp/pip-build-tracker-pp78gc8z' 2023-09-30T00:16:53,630 Created temporary directory: /tmp/pip-build-env-yqwxuomh 2023-09-30T00:16:53,634 Installing build dependencies: started 2023-09-30T00:16:53,635 Running command pip subprocess to install build dependencies 2023-09-30T00:16:54,765 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-09-30T00:16:55,286 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-30T00:16:56,862 Collecting setuptools>=40.8.0 2023-09-30T00:16:56,934 Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.2.2-py3-none-any.whl (807 kB) 2023-09-30T00:16:57,166 Collecting wheel 2023-09-30T00:16:57,182 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB) 2023-09-30T00:16:59,755 Installing collected packages: wheel, setuptools 2023-09-30T00:16:59,985 Creating /tmp/pip-build-env-yqwxuomh/overlay/local/bin 2023-09-30T00:16:59,987 changing mode of /tmp/pip-build-env-yqwxuomh/overlay/local/bin/wheel to 755 2023-09-30T00:17:02,176 Successfully installed setuptools-68.2.2 wheel-0.41.2 2023-09-30T00:17:02,764 Installing build dependencies: finished with status 'done' 2023-09-30T00:17:02,771 Getting requirements to build wheel: started 2023-09-30T00:17:02,773 Running command Getting requirements to build wheel 2023-09-30T00:17:03,681 running egg_info 2023-09-30T00:17:03,686 writing nnunetv2.egg-info/PKG-INFO 2023-09-30T00:17:03,691 writing dependency_links to nnunetv2.egg-info/dependency_links.txt 2023-09-30T00:17:03,694 writing entry points to nnunetv2.egg-info/entry_points.txt 2023-09-30T00:17:03,697 writing requirements to nnunetv2.egg-info/requires.txt 2023-09-30T00:17:03,698 writing top-level names to nnunetv2.egg-info/top_level.txt 2023-09-30T00:17:03,740 reading manifest file 'nnunetv2.egg-info/SOURCES.txt' 2023-09-30T00:17:03,746 adding license file 'LICENSE' 2023-09-30T00:17:03,755 writing manifest file 'nnunetv2.egg-info/SOURCES.txt' 2023-09-30T00:17:03,874 Getting requirements to build wheel: finished with status 'done' 2023-09-30T00:17:03,887 Created temporary directory: /tmp/pip-modern-metadata-dyhz6xbo 2023-09-30T00:17:03,889 Preparing metadata (pyproject.toml): started 2023-09-30T00:17:03,891 Running command Preparing metadata (pyproject.toml) 2023-09-30T00:17:04,744 running dist_info 2023-09-30T00:17:04,749 creating /tmp/pip-modern-metadata-dyhz6xbo/nnunetv2.egg-info 2023-09-30T00:17:04,754 writing /tmp/pip-modern-metadata-dyhz6xbo/nnunetv2.egg-info/PKG-INFO 2023-09-30T00:17:04,760 writing dependency_links to /tmp/pip-modern-metadata-dyhz6xbo/nnunetv2.egg-info/dependency_links.txt 2023-09-30T00:17:04,762 writing entry points to /tmp/pip-modern-metadata-dyhz6xbo/nnunetv2.egg-info/entry_points.txt 2023-09-30T00:17:04,764 writing requirements to /tmp/pip-modern-metadata-dyhz6xbo/nnunetv2.egg-info/requires.txt 2023-09-30T00:17:04,766 writing top-level names to /tmp/pip-modern-metadata-dyhz6xbo/nnunetv2.egg-info/top_level.txt 2023-09-30T00:17:04,767 writing manifest file '/tmp/pip-modern-metadata-dyhz6xbo/nnunetv2.egg-info/SOURCES.txt' 2023-09-30T00:17:04,806 reading manifest file '/tmp/pip-modern-metadata-dyhz6xbo/nnunetv2.egg-info/SOURCES.txt' 2023-09-30T00:17:04,808 adding license file 'LICENSE' 2023-09-30T00:17:04,814 writing manifest file '/tmp/pip-modern-metadata-dyhz6xbo/nnunetv2.egg-info/SOURCES.txt' 2023-09-30T00:17:04,816 creating '/tmp/pip-modern-metadata-dyhz6xbo/nnunetv2-2.1.2.dist-info' 2023-09-30T00:17:04,981 Preparing metadata (pyproject.toml): finished with status 'done' 2023-09-30T00:17:04,988 Source in /tmp/pip-wheel-f566sors/nnunetv2_25133d21b9044f758b7a6d3d29aee80f has version 2.1.2, which satisfies requirement nnunetv2==2.1.2 from https://files.pythonhosted.org/packages/75/0c/970bded1a4462ac6dfe97aaa8cfe2ae96e24597d26da6a3d7be829832bb3/nnunetv2-2.1.2.tar.gz 2023-09-30T00:17:04,989 Removed nnunetv2==2.1.2 from https://files.pythonhosted.org/packages/75/0c/970bded1a4462ac6dfe97aaa8cfe2ae96e24597d26da6a3d7be829832bb3/nnunetv2-2.1.2.tar.gz from build tracker '/tmp/pip-build-tracker-pp78gc8z' 2023-09-30T00:17:05,000 Created temporary directory: /tmp/pip-unpack-ennp4u3u 2023-09-30T00:17:05,001 Created temporary directory: /tmp/pip-unpack-oesnnpxg 2023-09-30T00:17:05,036 Building wheels for collected packages: nnunetv2 2023-09-30T00:17:05,040 Created temporary directory: /tmp/pip-wheel-r5ydtnwp 2023-09-30T00:17:05,041 Destination directory: /tmp/pip-wheel-r5ydtnwp 2023-09-30T00:17:05,043 Building wheel for nnunetv2 (pyproject.toml): started 2023-09-30T00:17:05,045 Running command Building wheel for nnunetv2 (pyproject.toml) 2023-09-30T00:17:05,812 running bdist_wheel 2023-09-30T00:17:05,833 running build 2023-09-30T00:17:05,834 running build_py 2023-09-30T00:17:05,839 creating build 2023-09-30T00:17:05,839 creating build/lib 2023-09-30T00:17:05,840 creating build/lib/nnunetv2 2023-09-30T00:17:05,841 copying nnunetv2/configuration.py -> build/lib/nnunetv2 2023-09-30T00:17:05,843 copying nnunetv2/__init__.py -> build/lib/nnunetv2 2023-09-30T00:17:05,844 copying nnunetv2/paths.py -> build/lib/nnunetv2 2023-09-30T00:17:05,847 creating build/lib/nnunetv2/inference 2023-09-30T00:17:05,848 copying nnunetv2/inference/__init__.py -> build/lib/nnunetv2/inference 2023-09-30T00:17:05,849 copying nnunetv2/inference/export_prediction.py -> build/lib/nnunetv2/inference 2023-09-30T00:17:05,851 copying nnunetv2/inference/data_iterators.py -> build/lib/nnunetv2/inference 2023-09-30T00:17:05,853 copying nnunetv2/inference/examples.py -> build/lib/nnunetv2/inference 2023-09-30T00:17:05,856 copying nnunetv2/inference/sliding_window_prediction.py -> build/lib/nnunetv2/inference 2023-09-30T00:17:05,857 copying nnunetv2/inference/predict_from_raw_data.py -> build/lib/nnunetv2/inference 2023-09-30T00:17:05,861 creating build/lib/nnunetv2/run 2023-09-30T00:17:05,862 copying nnunetv2/run/load_pretrained_weights.py -> build/lib/nnunetv2/run 2023-09-30T00:17:05,864 copying nnunetv2/run/__init__.py -> build/lib/nnunetv2/run 2023-09-30T00:17:05,865 copying nnunetv2/run/run_training.py -> build/lib/nnunetv2/run 2023-09-30T00:17:05,868 creating build/lib/nnunetv2/experiment_planning 2023-09-30T00:17:05,869 copying nnunetv2/experiment_planning/__init__.py -> build/lib/nnunetv2/experiment_planning 2023-09-30T00:17:05,870 copying nnunetv2/experiment_planning/plan_and_preprocess_api.py -> build/lib/nnunetv2/experiment_planning 2023-09-30T00:17:05,872 copying nnunetv2/experiment_planning/plan_and_preprocess_entrypoints.py -> build/lib/nnunetv2/experiment_planning 2023-09-30T00:17:05,875 copying nnunetv2/experiment_planning/verify_dataset_integrity.py -> build/lib/nnunetv2/experiment_planning 2023-09-30T00:17:05,877 creating build/lib/nnunetv2/model_sharing 2023-09-30T00:17:05,878 copying nnunetv2/model_sharing/entry_points.py -> build/lib/nnunetv2/model_sharing 2023-09-30T00:17:05,880 copying nnunetv2/model_sharing/model_import.py -> build/lib/nnunetv2/model_sharing 2023-09-30T00:17:05,882 copying nnunetv2/model_sharing/__init__.py -> build/lib/nnunetv2/model_sharing 2023-09-30T00:17:05,883 copying nnunetv2/model_sharing/model_download.py -> build/lib/nnunetv2/model_sharing 2023-09-30T00:17:05,885 copying nnunetv2/model_sharing/model_export.py -> build/lib/nnunetv2/model_sharing 2023-09-30T00:17:05,887 creating build/lib/nnunetv2/tests 2023-09-30T00:17:05,888 copying nnunetv2/tests/__init__.py -> build/lib/nnunetv2/tests 2023-09-30T00:17:05,890 creating build/lib/nnunetv2/batch_running 2023-09-30T00:17:05,891 copying nnunetv2/batch_running/collect_results_custom_Decathlon.py -> build/lib/nnunetv2/batch_running 2023-09-30T00:17:05,893 copying nnunetv2/batch_running/__init__.py -> build/lib/nnunetv2/batch_running 2023-09-30T00:17:05,894 copying nnunetv2/batch_running/generate_lsf_runs_customDecathlon.py -> build/lib/nnunetv2/batch_running 2023-09-30T00:17:05,896 copying nnunetv2/batch_running/collect_results_custom_Decathlon_2d.py -> build/lib/nnunetv2/batch_running 2023-09-30T00:17:05,898 creating build/lib/nnunetv2/utilities 2023-09-30T00:17:05,899 copying nnunetv2/utilities/file_path_utilities.py -> build/lib/nnunetv2/utilities 2023-09-30T00:17:05,901 copying nnunetv2/utilities/utils.py -> build/lib/nnunetv2/utilities 2023-09-30T00:17:05,903 copying nnunetv2/utilities/overlay_plots.py -> build/lib/nnunetv2/utilities 2023-09-30T00:17:05,906 copying nnunetv2/utilities/__init__.py -> build/lib/nnunetv2/utilities 2023-09-30T00:17:05,907 copying nnunetv2/utilities/dataset_name_id_conversion.py -> build/lib/nnunetv2/utilities 2023-09-30T00:17:05,909 copying nnunetv2/utilities/get_network_from_plans.py -> build/lib/nnunetv2/utilities 2023-09-30T00:17:05,910 copying nnunetv2/utilities/network_initialization.py -> build/lib/nnunetv2/utilities 2023-09-30T00:17:05,912 copying nnunetv2/utilities/json_export.py -> build/lib/nnunetv2/utilities 2023-09-30T00:17:05,914 copying nnunetv2/utilities/helpers.py -> build/lib/nnunetv2/utilities 2023-09-30T00:17:05,915 copying nnunetv2/utilities/default_n_proc_DA.py -> build/lib/nnunetv2/utilities 2023-09-30T00:17:05,917 copying nnunetv2/utilities/find_class_by_name.py -> build/lib/nnunetv2/utilities 2023-09-30T00:17:05,918 copying nnunetv2/utilities/collate_outputs.py -> build/lib/nnunetv2/utilities 2023-09-30T00:17:05,920 copying nnunetv2/utilities/ddp_allgather.py -> build/lib/nnunetv2/utilities 2023-09-30T00:17:05,922 creating build/lib/nnunetv2/preprocessing 2023-09-30T00:17:05,923 copying nnunetv2/preprocessing/__init__.py -> build/lib/nnunetv2/preprocessing 2023-09-30T00:17:05,925 creating build/lib/nnunetv2/training 2023-09-30T00:17:05,926 copying nnunetv2/training/__init__.py -> build/lib/nnunetv2/training 2023-09-30T00:17:05,928 creating build/lib/nnunetv2/imageio 2023-09-30T00:17:05,929 copying nnunetv2/imageio/tif_reader_writer.py -> build/lib/nnunetv2/imageio 2023-09-30T00:17:05,931 copying nnunetv2/imageio/simpleitk_reader_writer.py -> build/lib/nnunetv2/imageio 2023-09-30T00:17:05,933 copying nnunetv2/imageio/__init__.py -> build/lib/nnunetv2/imageio 2023-09-30T00:17:05,934 copying nnunetv2/imageio/base_reader_writer.py -> build/lib/nnunetv2/imageio 2023-09-30T00:17:05,936 copying nnunetv2/imageio/natural_image_reager_writer.py -> build/lib/nnunetv2/imageio 2023-09-30T00:17:05,938 copying nnunetv2/imageio/nibabel_reader_writer.py -> build/lib/nnunetv2/imageio 2023-09-30T00:17:05,940 copying nnunetv2/imageio/reader_writer_registry.py -> build/lib/nnunetv2/imageio 2023-09-30T00:17:05,942 creating build/lib/nnunetv2/evaluation 2023-09-30T00:17:05,943 copying nnunetv2/evaluation/__init__.py -> build/lib/nnunetv2/evaluation 2023-09-30T00:17:05,945 copying nnunetv2/evaluation/accumulate_cv_results.py -> build/lib/nnunetv2/evaluation 2023-09-30T00:17:05,947 copying nnunetv2/evaluation/evaluate_predictions.py -> build/lib/nnunetv2/evaluation 2023-09-30T00:17:05,949 copying nnunetv2/evaluation/find_best_configuration.py -> build/lib/nnunetv2/evaluation 2023-09-30T00:17:05,952 creating build/lib/nnunetv2/ensembling 2023-09-30T00:17:05,953 copying nnunetv2/ensembling/__init__.py -> build/lib/nnunetv2/ensembling 2023-09-30T00:17:05,954 copying nnunetv2/ensembling/ensemble.py -> build/lib/nnunetv2/ensembling 2023-09-30T00:17:05,957 creating build/lib/nnunetv2/postprocessing 2023-09-30T00:17:05,957 copying nnunetv2/postprocessing/__init__.py -> build/lib/nnunetv2/postprocessing 2023-09-30T00:17:05,959 copying nnunetv2/postprocessing/remove_connected_components.py -> build/lib/nnunetv2/postprocessing 2023-09-30T00:17:05,962 creating build/lib/nnunetv2/dataset_conversion 2023-09-30T00:17:05,963 copying nnunetv2/dataset_conversion/Dataset137_BraTS21.py -> build/lib/nnunetv2/dataset_conversion 2023-09-30T00:17:05,965 copying nnunetv2/dataset_conversion/Dataset114_MNMs.py -> build/lib/nnunetv2/dataset_conversion 2023-09-30T00:17:05,967 copying nnunetv2/dataset_conversion/convert_MSD_dataset.py -> build/lib/nnunetv2/dataset_conversion 2023-09-30T00:17:05,969 copying nnunetv2/dataset_conversion/Dataset115_EMIDEC.py -> build/lib/nnunetv2/dataset_conversion 2023-09-30T00:17:05,971 copying nnunetv2/dataset_conversion/generate_dataset_json.py -> build/lib/nnunetv2/dataset_conversion 2023-09-30T00:17:05,973 copying nnunetv2/dataset_conversion/__init__.py -> build/lib/nnunetv2/dataset_conversion 2023-09-30T00:17:05,974 copying nnunetv2/dataset_conversion/Dataset027_ACDC.py -> build/lib/nnunetv2/dataset_conversion 2023-09-30T00:17:05,976 copying nnunetv2/dataset_conversion/Dataset219_Amos2022_task2.py -> build/lib/nnunetv2/dataset_conversion 2023-09-30T00:17:05,979 copying nnunetv2/dataset_conversion/convert_raw_dataset_from_old_nnunet_format.py -> build/lib/nnunetv2/dataset_conversion 2023-09-30T00:17:05,981 copying nnunetv2/dataset_conversion/Dataset218_Amos2022_task1.py -> build/lib/nnunetv2/dataset_conversion 2023-09-30T00:17:05,982 copying nnunetv2/dataset_conversion/Dataset120_RoadSegmentation.py -> build/lib/nnunetv2/dataset_conversion 2023-09-30T00:17:05,984 copying nnunetv2/dataset_conversion/Dataset073_Fluo_C3DH_A549_SIM.py -> build/lib/nnunetv2/dataset_conversion 2023-09-30T00:17:05,986 copying nnunetv2/dataset_conversion/Dataset988_dummyDataset4.py -> build/lib/nnunetv2/dataset_conversion 2023-09-30T00:17:05,988 copying nnunetv2/dataset_conversion/Dataset220_KiTS2023.py -> build/lib/nnunetv2/dataset_conversion 2023-09-30T00:17:05,990 creating build/lib/nnunetv2/experiment_planning/dataset_fingerprint 2023-09-30T00:17:05,991 copying nnunetv2/experiment_planning/dataset_fingerprint/__init__.py -> build/lib/nnunetv2/experiment_planning/dataset_fingerprint 2023-09-30T00:17:05,992 copying nnunetv2/experiment_planning/dataset_fingerprint/fingerprint_extractor.py -> build/lib/nnunetv2/experiment_planning/dataset_fingerprint 2023-09-30T00:17:05,995 creating build/lib/nnunetv2/experiment_planning/plans_for_pretraining 2023-09-30T00:17:05,996 copying nnunetv2/experiment_planning/plans_for_pretraining/__init__.py -> build/lib/nnunetv2/experiment_planning/plans_for_pretraining 2023-09-30T00:17:05,997 copying nnunetv2/experiment_planning/plans_for_pretraining/move_plans_between_datasets.py -> build/lib/nnunetv2/experiment_planning/plans_for_pretraining 2023-09-30T00:17:06,000 creating build/lib/nnunetv2/experiment_planning/experiment_planners 2023-09-30T00:17:06,001 copying nnunetv2/experiment_planning/experiment_planners/resencUNet_planner.py -> build/lib/nnunetv2/experiment_planning/experiment_planners 2023-09-30T00:17:06,003 copying nnunetv2/experiment_planning/experiment_planners/default_experiment_planner.py -> build/lib/nnunetv2/experiment_planning/experiment_planners 2023-09-30T00:17:06,005 copying nnunetv2/experiment_planning/experiment_planners/__init__.py -> build/lib/nnunetv2/experiment_planning/experiment_planners 2023-09-30T00:17:06,006 copying nnunetv2/experiment_planning/experiment_planners/network_topology.py -> build/lib/nnunetv2/experiment_planning/experiment_planners 2023-09-30T00:17:06,009 creating build/lib/nnunetv2/tests/integration_tests 2023-09-30T00:17:06,010 copying nnunetv2/tests/integration_tests/__init__.py -> build/lib/nnunetv2/tests/integration_tests 2023-09-30T00:17:06,011 copying nnunetv2/tests/integration_tests/add_lowres_and_cascade.py -> build/lib/nnunetv2/tests/integration_tests 2023-09-30T00:17:06,013 copying nnunetv2/tests/integration_tests/cleanup_integration_test.py -> build/lib/nnunetv2/tests/integration_tests 2023-09-30T00:17:06,015 copying nnunetv2/tests/integration_tests/run_integration_test_bestconfig_inference.py -> build/lib/nnunetv2/tests/integration_tests 2023-09-30T00:17:06,017 creating build/lib/nnunetv2/batch_running/benchmarking 2023-09-30T00:17:06,018 copying nnunetv2/batch_running/benchmarking/__init__.py -> build/lib/nnunetv2/batch_running/benchmarking 2023-09-30T00:17:06,020 copying nnunetv2/batch_running/benchmarking/summarize_benchmark_results.py -> build/lib/nnunetv2/batch_running/benchmarking 2023-09-30T00:17:06,021 copying nnunetv2/batch_running/benchmarking/generate_benchmarking_commands.py -> build/lib/nnunetv2/batch_running/benchmarking 2023-09-30T00:17:06,024 creating build/lib/nnunetv2/batch_running/release_trainings 2023-09-30T00:17:06,025 copying nnunetv2/batch_running/release_trainings/__init__.py -> build/lib/nnunetv2/batch_running/release_trainings 2023-09-30T00:17:06,027 creating build/lib/nnunetv2/batch_running/release_trainings/nnunetv2_v1 2023-09-30T00:17:06,028 copying nnunetv2/batch_running/release_trainings/nnunetv2_v1/generate_lsf_commands.py -> build/lib/nnunetv2/batch_running/release_trainings/nnunetv2_v1 2023-09-30T00:17:06,029 copying nnunetv2/batch_running/release_trainings/nnunetv2_v1/__init__.py -> build/lib/nnunetv2/batch_running/release_trainings/nnunetv2_v1 2023-09-30T00:17:06,031 copying nnunetv2/batch_running/release_trainings/nnunetv2_v1/collect_results.py -> build/lib/nnunetv2/batch_running/release_trainings/nnunetv2_v1 2023-09-30T00:17:06,033 creating build/lib/nnunetv2/utilities/label_handling 2023-09-30T00:17:06,034 copying nnunetv2/utilities/label_handling/label_handling.py -> build/lib/nnunetv2/utilities/label_handling 2023-09-30T00:17:06,036 copying nnunetv2/utilities/label_handling/__init__.py -> build/lib/nnunetv2/utilities/label_handling 2023-09-30T00:17:06,038 creating build/lib/nnunetv2/utilities/plans_handling 2023-09-30T00:17:06,039 copying nnunetv2/utilities/plans_handling/__init__.py -> build/lib/nnunetv2/utilities/plans_handling 2023-09-30T00:17:06,041 copying nnunetv2/utilities/plans_handling/plans_handler.py -> build/lib/nnunetv2/utilities/plans_handling 2023-09-30T00:17:06,043 creating build/lib/nnunetv2/preprocessing/resampling 2023-09-30T00:17:06,044 copying nnunetv2/preprocessing/resampling/utils.py -> build/lib/nnunetv2/preprocessing/resampling 2023-09-30T00:17:06,046 copying nnunetv2/preprocessing/resampling/__init__.py -> build/lib/nnunetv2/preprocessing/resampling 2023-09-30T00:17:06,047 copying nnunetv2/preprocessing/resampling/default_resampling.py -> build/lib/nnunetv2/preprocessing/resampling 2023-09-30T00:17:06,050 creating build/lib/nnunetv2/preprocessing/preprocessors 2023-09-30T00:17:06,051 copying nnunetv2/preprocessing/preprocessors/__init__.py -> build/lib/nnunetv2/preprocessing/preprocessors 2023-09-30T00:17:06,052 copying nnunetv2/preprocessing/preprocessors/default_preprocessor.py -> build/lib/nnunetv2/preprocessing/preprocessors 2023-09-30T00:17:06,055 creating build/lib/nnunetv2/preprocessing/cropping 2023-09-30T00:17:06,056 copying nnunetv2/preprocessing/cropping/__init__.py -> build/lib/nnunetv2/preprocessing/cropping 2023-09-30T00:17:06,057 copying nnunetv2/preprocessing/cropping/cropping.py -> build/lib/nnunetv2/preprocessing/cropping 2023-09-30T00:17:06,059 creating build/lib/nnunetv2/preprocessing/normalization 2023-09-30T00:17:06,060 copying nnunetv2/preprocessing/normalization/map_channel_name_to_normalization.py -> build/lib/nnunetv2/preprocessing/normalization 2023-09-30T00:17:06,062 copying nnunetv2/preprocessing/normalization/default_normalization_schemes.py -> build/lib/nnunetv2/preprocessing/normalization 2023-09-30T00:17:06,064 copying nnunetv2/preprocessing/normalization/__init__.py -> build/lib/nnunetv2/preprocessing/normalization 2023-09-30T00:17:06,066 creating build/lib/nnunetv2/training/logging 2023-09-30T00:17:06,067 copying nnunetv2/training/logging/__init__.py -> build/lib/nnunetv2/training/logging 2023-09-30T00:17:06,068 copying nnunetv2/training/logging/nnunet_logger.py -> build/lib/nnunetv2/training/logging 2023-09-30T00:17:06,071 creating build/lib/nnunetv2/training/lr_scheduler 2023-09-30T00:17:06,072 copying nnunetv2/training/lr_scheduler/__init__.py -> build/lib/nnunetv2/training/lr_scheduler 2023-09-30T00:17:06,074 copying nnunetv2/training/lr_scheduler/polylr.py -> build/lib/nnunetv2/training/lr_scheduler 2023-09-30T00:17:06,076 creating build/lib/nnunetv2/training/loss 2023-09-30T00:17:06,077 copying nnunetv2/training/loss/deep_supervision.py -> build/lib/nnunetv2/training/loss 2023-09-30T00:17:06,080 copying nnunetv2/training/loss/__init__.py -> build/lib/nnunetv2/training/loss 2023-09-30T00:17:06,081 copying nnunetv2/training/loss/compound_losses.py -> build/lib/nnunetv2/training/loss 2023-09-30T00:17:06,083 copying nnunetv2/training/loss/dice.py -> build/lib/nnunetv2/training/loss 2023-09-30T00:17:06,086 copying nnunetv2/training/loss/robust_ce_loss.py -> build/lib/nnunetv2/training/loss 2023-09-30T00:17:06,088 creating build/lib/nnunetv2/training/nnUNetTrainer 2023-09-30T00:17:06,089 copying nnunetv2/training/nnUNetTrainer/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer 2023-09-30T00:17:06,091 copying nnunetv2/training/nnUNetTrainer/nnUNetTrainer.py -> build/lib/nnunetv2/training/nnUNetTrainer 2023-09-30T00:17:06,094 creating build/lib/nnunetv2/training/dataloading 2023-09-30T00:17:06,095 copying nnunetv2/training/dataloading/nnunet_dataset.py -> build/lib/nnunetv2/training/dataloading 2023-09-30T00:17:06,097 copying nnunetv2/training/dataloading/base_data_loader.py -> build/lib/nnunetv2/training/dataloading 2023-09-30T00:17:06,100 copying nnunetv2/training/dataloading/utils.py -> build/lib/nnunetv2/training/dataloading 2023-09-30T00:17:06,101 copying nnunetv2/training/dataloading/data_loader_2d.py -> build/lib/nnunetv2/training/dataloading 2023-09-30T00:17:06,103 copying nnunetv2/training/dataloading/__init__.py -> build/lib/nnunetv2/training/dataloading 2023-09-30T00:17:06,105 copying nnunetv2/training/dataloading/data_loader_3d.py -> build/lib/nnunetv2/training/dataloading 2023-09-30T00:17:06,107 creating build/lib/nnunetv2/training/data_augmentation 2023-09-30T00:17:06,108 copying nnunetv2/training/data_augmentation/compute_initial_patch_size.py -> build/lib/nnunetv2/training/data_augmentation 2023-09-30T00:17:06,110 copying nnunetv2/training/data_augmentation/__init__.py -> build/lib/nnunetv2/training/data_augmentation 2023-09-30T00:17:06,112 creating build/lib/nnunetv2/training/nnUNetTrainer/variants 2023-09-30T00:17:06,112 copying nnunetv2/training/nnUNetTrainer/variants/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants 2023-09-30T00:17:06,115 creating build/lib/nnunetv2/training/nnUNetTrainer/variants/benchmarking 2023-09-30T00:17:06,116 copying nnunetv2/training/nnUNetTrainer/variants/benchmarking/nnUNetTrainerBenchmark_5epochs.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/benchmarking 2023-09-30T00:17:06,118 copying nnunetv2/training/nnUNetTrainer/variants/benchmarking/nnUNetTrainerBenchmark_5epochs_noDataLoading.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/benchmarking 2023-09-30T00:17:06,120 copying nnunetv2/training/nnUNetTrainer/variants/benchmarking/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/benchmarking 2023-09-30T00:17:06,122 creating build/lib/nnunetv2/training/nnUNetTrainer/variants/sampling 2023-09-30T00:17:06,122 copying nnunetv2/training/nnUNetTrainer/variants/sampling/nnUNetTrainer_probabilisticOversampling.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/sampling 2023-09-30T00:17:06,125 copying nnunetv2/training/nnUNetTrainer/variants/sampling/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/sampling 2023-09-30T00:17:06,127 creating build/lib/nnunetv2/training/nnUNetTrainer/variants/training_length 2023-09-30T00:17:06,128 copying nnunetv2/training/nnUNetTrainer/variants/training_length/nnUNetTrainer_Xepochs_NoMirroring.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/training_length 2023-09-30T00:17:06,130 copying nnunetv2/training/nnUNetTrainer/variants/training_length/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/training_length 2023-09-30T00:17:06,131 copying nnunetv2/training/nnUNetTrainer/variants/training_length/nnUNetTrainer_Xepochs.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/training_length 2023-09-30T00:17:06,134 creating build/lib/nnunetv2/training/nnUNetTrainer/variants/optimizer 2023-09-30T00:17:06,135 copying nnunetv2/training/nnUNetTrainer/variants/optimizer/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/optimizer 2023-09-30T00:17:06,136 copying nnunetv2/training/nnUNetTrainer/variants/optimizer/nnUNetTrainerAdan.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/optimizer 2023-09-30T00:17:06,138 copying nnunetv2/training/nnUNetTrainer/variants/optimizer/nnUNetTrainerAdam.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/optimizer 2023-09-30T00:17:06,141 creating build/lib/nnunetv2/training/nnUNetTrainer/variants/loss 2023-09-30T00:17:06,142 copying nnunetv2/training/nnUNetTrainer/variants/loss/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/loss 2023-09-30T00:17:06,143 copying nnunetv2/training/nnUNetTrainer/variants/loss/nnUNetTrainerCELoss.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/loss 2023-09-30T00:17:06,145 copying nnunetv2/training/nnUNetTrainer/variants/loss/nnUNetTrainerTopkLoss.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/loss 2023-09-30T00:17:06,147 copying nnunetv2/training/nnUNetTrainer/variants/loss/nnUNetTrainerDiceLoss.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/loss 2023-09-30T00:17:06,149 creating build/lib/nnunetv2/training/nnUNetTrainer/variants/lr_schedule 2023-09-30T00:17:06,150 copying nnunetv2/training/nnUNetTrainer/variants/lr_schedule/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/lr_schedule 2023-09-30T00:17:06,152 copying nnunetv2/training/nnUNetTrainer/variants/lr_schedule/nnUNetTrainerCosAnneal.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/lr_schedule 2023-09-30T00:17:06,154 creating build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation 2023-09-30T00:17:06,155 copying nnunetv2/training/nnUNetTrainer/variants/data_augmentation/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation 2023-09-30T00:17:06,157 copying nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerDA5.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation 2023-09-30T00:17:06,160 copying nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerNoMirroring.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation 2023-09-30T00:17:06,162 copying nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerDAOrd0.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation 2023-09-30T00:17:06,164 copying nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerNoDA.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation 2023-09-30T00:17:06,166 creating build/lib/nnunetv2/training/nnUNetTrainer/variants/network_architecture 2023-09-30T00:17:06,167 copying nnunetv2/training/nnUNetTrainer/variants/network_architecture/__init__.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/network_architecture 2023-09-30T00:17:06,169 copying nnunetv2/training/nnUNetTrainer/variants/network_architecture/nnUNetTrainerBN.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/network_architecture 2023-09-30T00:17:06,170 copying nnunetv2/training/nnUNetTrainer/variants/network_architecture/nnUNetTrainerNoDeepSupervision.py -> build/lib/nnunetv2/training/nnUNetTrainer/variants/network_architecture 2023-09-30T00:17:06,173 creating build/lib/nnunetv2/training/data_augmentation/custom_transforms 2023-09-30T00:17:06,174 copying nnunetv2/training/data_augmentation/custom_transforms/limited_length_multithreaded_augmenter.py -> build/lib/nnunetv2/training/data_augmentation/custom_transforms 2023-09-30T00:17:06,176 copying nnunetv2/training/data_augmentation/custom_transforms/region_based_training.py -> build/lib/nnunetv2/training/data_augmentation/custom_transforms 2023-09-30T00:17:06,178 copying nnunetv2/training/data_augmentation/custom_transforms/transforms_for_dummy_2d.py -> build/lib/nnunetv2/training/data_augmentation/custom_transforms 2023-09-30T00:17:06,180 copying nnunetv2/training/data_augmentation/custom_transforms/__init__.py -> build/lib/nnunetv2/training/data_augmentation/custom_transforms 2023-09-30T00:17:06,181 copying nnunetv2/training/data_augmentation/custom_transforms/masking.py -> build/lib/nnunetv2/training/data_augmentation/custom_transforms 2023-09-30T00:17:06,183 copying nnunetv2/training/data_augmentation/custom_transforms/deep_supervision_donwsampling.py -> build/lib/nnunetv2/training/data_augmentation/custom_transforms 2023-09-30T00:17:06,185 copying nnunetv2/training/data_augmentation/custom_transforms/cascade_transforms.py -> build/lib/nnunetv2/training/data_augmentation/custom_transforms 2023-09-30T00:17:06,187 copying nnunetv2/training/data_augmentation/custom_transforms/manipulating_data_dict.py -> build/lib/nnunetv2/training/data_augmentation/custom_transforms 2023-09-30T00:17:06,189 creating build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests 2023-09-30T00:17:06,190 copying nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset999_IntegrationTest_Hippocampus.py -> build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests 2023-09-30T00:17:06,192 copying nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset997_IntegrationTest_Hippocampus_regions.py -> build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests 2023-09-30T00:17:06,194 copying nnunetv2/dataset_conversion/datasets_for_integration_tests/__init__.py -> build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests 2023-09-30T00:17:06,195 copying nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset996_IntegrationTest_Hippocampus_regions_ignore.py -> build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests 2023-09-30T00:17:06,197 copying nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset998_IntegrationTest_Hippocampus_ignore.py -> build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests 2023-09-30T00:17:06,199 running egg_info 2023-09-30T00:17:06,205 writing nnunetv2.egg-info/PKG-INFO 2023-09-30T00:17:06,210 writing dependency_links to nnunetv2.egg-info/dependency_links.txt 2023-09-30T00:17:06,212 writing entry points to nnunetv2.egg-info/entry_points.txt 2023-09-30T00:17:06,214 writing requirements to nnunetv2.egg-info/requires.txt 2023-09-30T00:17:06,215 writing top-level names to nnunetv2.egg-info/top_level.txt 2023-09-30T00:17:06,244 reading manifest file 'nnunetv2.egg-info/SOURCES.txt' 2023-09-30T00:17:06,250 adding license file 'LICENSE' 2023-09-30T00:17:06,258 writing manifest file 'nnunetv2.egg-info/SOURCES.txt' 2023-09-30T00:17:06,292 installing to build/bdist.linux-armv7l/wheel 2023-09-30T00:17:06,292 running install 2023-09-30T00:17:06,316 running install_lib 2023-09-30T00:17:06,322 creating build/bdist.linux-armv7l 2023-09-30T00:17:06,323 creating build/bdist.linux-armv7l/wheel 2023-09-30T00:17:06,325 creating build/bdist.linux-armv7l/wheel/nnunetv2 2023-09-30T00:17:06,326 creating build/bdist.linux-armv7l/wheel/nnunetv2/inference 2023-09-30T00:17:06,327 copying build/lib/nnunetv2/inference/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/inference 2023-09-30T00:17:06,329 copying build/lib/nnunetv2/inference/export_prediction.py -> build/bdist.linux-armv7l/wheel/nnunetv2/inference 2023-09-30T00:17:06,331 copying build/lib/nnunetv2/inference/data_iterators.py -> build/bdist.linux-armv7l/wheel/nnunetv2/inference 2023-09-30T00:17:06,334 copying build/lib/nnunetv2/inference/examples.py -> build/bdist.linux-armv7l/wheel/nnunetv2/inference 2023-09-30T00:17:06,336 copying build/lib/nnunetv2/inference/sliding_window_prediction.py -> build/bdist.linux-armv7l/wheel/nnunetv2/inference 2023-09-30T00:17:06,338 copying build/lib/nnunetv2/inference/predict_from_raw_data.py -> build/bdist.linux-armv7l/wheel/nnunetv2/inference 2023-09-30T00:17:06,341 copying build/lib/nnunetv2/configuration.py -> build/bdist.linux-armv7l/wheel/nnunetv2 2023-09-30T00:17:06,344 creating build/bdist.linux-armv7l/wheel/nnunetv2/run 2023-09-30T00:17:06,345 copying build/lib/nnunetv2/run/load_pretrained_weights.py -> build/bdist.linux-armv7l/wheel/nnunetv2/run 2023-09-30T00:17:06,347 copying build/lib/nnunetv2/run/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/run 2023-09-30T00:17:06,349 copying build/lib/nnunetv2/run/run_training.py -> build/bdist.linux-armv7l/wheel/nnunetv2/run 2023-09-30T00:17:06,352 creating build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning 2023-09-30T00:17:06,353 copying build/lib/nnunetv2/experiment_planning/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning 2023-09-30T00:17:06,355 copying build/lib/nnunetv2/experiment_planning/plan_and_preprocess_api.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning 2023-09-30T00:17:06,357 copying build/lib/nnunetv2/experiment_planning/plan_and_preprocess_entrypoints.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning 2023-09-30T00:17:06,360 creating build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/dataset_fingerprint 2023-09-30T00:17:06,361 copying build/lib/nnunetv2/experiment_planning/dataset_fingerprint/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/dataset_fingerprint 2023-09-30T00:17:06,362 copying build/lib/nnunetv2/experiment_planning/dataset_fingerprint/fingerprint_extractor.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/dataset_fingerprint 2023-09-30T00:17:06,366 copying build/lib/nnunetv2/experiment_planning/verify_dataset_integrity.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning 2023-09-30T00:17:06,368 creating build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/plans_for_pretraining 2023-09-30T00:17:06,369 copying build/lib/nnunetv2/experiment_planning/plans_for_pretraining/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/plans_for_pretraining 2023-09-30T00:17:06,371 copying build/lib/nnunetv2/experiment_planning/plans_for_pretraining/move_plans_between_datasets.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/plans_for_pretraining 2023-09-30T00:17:06,373 creating build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/experiment_planners 2023-09-30T00:17:06,374 copying build/lib/nnunetv2/experiment_planning/experiment_planners/resencUNet_planner.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/experiment_planners 2023-09-30T00:17:06,376 copying build/lib/nnunetv2/experiment_planning/experiment_planners/default_experiment_planner.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/experiment_planners 2023-09-30T00:17:06,379 copying build/lib/nnunetv2/experiment_planning/experiment_planners/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/experiment_planners 2023-09-30T00:17:06,380 copying build/lib/nnunetv2/experiment_planning/experiment_planners/network_topology.py -> build/bdist.linux-armv7l/wheel/nnunetv2/experiment_planning/experiment_planners 2023-09-30T00:17:06,382 copying build/lib/nnunetv2/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2 2023-09-30T00:17:06,384 creating build/bdist.linux-armv7l/wheel/nnunetv2/model_sharing 2023-09-30T00:17:06,385 copying build/lib/nnunetv2/model_sharing/entry_points.py -> build/bdist.linux-armv7l/wheel/nnunetv2/model_sharing 2023-09-30T00:17:06,387 copying build/lib/nnunetv2/model_sharing/model_import.py -> build/bdist.linux-armv7l/wheel/nnunetv2/model_sharing 2023-09-30T00:17:06,389 copying build/lib/nnunetv2/model_sharing/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/model_sharing 2023-09-30T00:17:06,391 copying build/lib/nnunetv2/model_sharing/model_download.py -> build/bdist.linux-armv7l/wheel/nnunetv2/model_sharing 2023-09-30T00:17:06,393 copying build/lib/nnunetv2/model_sharing/model_export.py -> build/bdist.linux-armv7l/wheel/nnunetv2/model_sharing 2023-09-30T00:17:06,396 creating build/bdist.linux-armv7l/wheel/nnunetv2/tests 2023-09-30T00:17:06,397 creating build/bdist.linux-armv7l/wheel/nnunetv2/tests/integration_tests 2023-09-30T00:17:06,398 copying build/lib/nnunetv2/tests/integration_tests/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/tests/integration_tests 2023-09-30T00:17:06,400 copying build/lib/nnunetv2/tests/integration_tests/add_lowres_and_cascade.py -> build/bdist.linux-armv7l/wheel/nnunetv2/tests/integration_tests 2023-09-30T00:17:06,402 copying build/lib/nnunetv2/tests/integration_tests/cleanup_integration_test.py -> build/bdist.linux-armv7l/wheel/nnunetv2/tests/integration_tests 2023-09-30T00:17:06,404 copying build/lib/nnunetv2/tests/integration_tests/run_integration_test_bestconfig_inference.py -> build/bdist.linux-armv7l/wheel/nnunetv2/tests/integration_tests 2023-09-30T00:17:06,406 copying build/lib/nnunetv2/tests/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/tests 2023-09-30T00:17:06,408 creating build/bdist.linux-armv7l/wheel/nnunetv2/batch_running 2023-09-30T00:17:06,409 copying build/lib/nnunetv2/batch_running/collect_results_custom_Decathlon.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running 2023-09-30T00:17:06,412 creating build/bdist.linux-armv7l/wheel/nnunetv2/batch_running/benchmarking 2023-09-30T00:17:06,413 copying build/lib/nnunetv2/batch_running/benchmarking/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running/benchmarking 2023-09-30T00:17:06,414 copying build/lib/nnunetv2/batch_running/benchmarking/summarize_benchmark_results.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running/benchmarking 2023-09-30T00:17:06,416 copying build/lib/nnunetv2/batch_running/benchmarking/generate_benchmarking_commands.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running/benchmarking 2023-09-30T00:17:06,418 copying build/lib/nnunetv2/batch_running/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running 2023-09-30T00:17:06,419 copying build/lib/nnunetv2/batch_running/generate_lsf_runs_customDecathlon.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running 2023-09-30T00:17:06,421 copying build/lib/nnunetv2/batch_running/collect_results_custom_Decathlon_2d.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running 2023-09-30T00:17:06,423 creating build/bdist.linux-armv7l/wheel/nnunetv2/batch_running/release_trainings 2023-09-30T00:17:06,424 creating build/bdist.linux-armv7l/wheel/nnunetv2/batch_running/release_trainings/nnunetv2_v1 2023-09-30T00:17:06,425 copying build/lib/nnunetv2/batch_running/release_trainings/nnunetv2_v1/generate_lsf_commands.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running/release_trainings/nnunetv2_v1 2023-09-30T00:17:06,427 copying build/lib/nnunetv2/batch_running/release_trainings/nnunetv2_v1/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running/release_trainings/nnunetv2_v1 2023-09-30T00:17:06,429 copying build/lib/nnunetv2/batch_running/release_trainings/nnunetv2_v1/collect_results.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running/release_trainings/nnunetv2_v1 2023-09-30T00:17:06,431 copying build/lib/nnunetv2/batch_running/release_trainings/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/batch_running/release_trainings 2023-09-30T00:17:06,433 creating build/bdist.linux-armv7l/wheel/nnunetv2/utilities 2023-09-30T00:17:06,434 copying build/lib/nnunetv2/utilities/file_path_utilities.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities 2023-09-30T00:17:06,436 copying build/lib/nnunetv2/utilities/utils.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities 2023-09-30T00:17:06,438 copying build/lib/nnunetv2/utilities/overlay_plots.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities 2023-09-30T00:17:06,440 copying build/lib/nnunetv2/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities 2023-09-30T00:17:06,441 copying build/lib/nnunetv2/utilities/dataset_name_id_conversion.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities 2023-09-30T00:17:06,443 copying build/lib/nnunetv2/utilities/get_network_from_plans.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities 2023-09-30T00:17:06,445 copying build/lib/nnunetv2/utilities/network_initialization.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities 2023-09-30T00:17:06,448 creating build/bdist.linux-armv7l/wheel/nnunetv2/utilities/label_handling 2023-09-30T00:17:06,449 copying build/lib/nnunetv2/utilities/label_handling/label_handling.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities/label_handling 2023-09-30T00:17:06,451 copying build/lib/nnunetv2/utilities/label_handling/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities/label_handling 2023-09-30T00:17:06,453 copying build/lib/nnunetv2/utilities/json_export.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities 2023-09-30T00:17:06,455 copying build/lib/nnunetv2/utilities/helpers.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities 2023-09-30T00:17:06,457 creating build/bdist.linux-armv7l/wheel/nnunetv2/utilities/plans_handling 2023-09-30T00:17:06,458 copying build/lib/nnunetv2/utilities/plans_handling/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities/plans_handling 2023-09-30T00:17:06,460 copying build/lib/nnunetv2/utilities/plans_handling/plans_handler.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities/plans_handling 2023-09-30T00:17:06,462 copying build/lib/nnunetv2/utilities/default_n_proc_DA.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities 2023-09-30T00:17:06,464 copying build/lib/nnunetv2/utilities/find_class_by_name.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities 2023-09-30T00:17:06,466 copying build/lib/nnunetv2/utilities/collate_outputs.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities 2023-09-30T00:17:06,467 copying build/lib/nnunetv2/utilities/ddp_allgather.py -> build/bdist.linux-armv7l/wheel/nnunetv2/utilities 2023-09-30T00:17:06,469 creating build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing 2023-09-30T00:17:06,471 creating build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/resampling 2023-09-30T00:17:06,472 copying build/lib/nnunetv2/preprocessing/resampling/utils.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/resampling 2023-09-30T00:17:06,474 copying build/lib/nnunetv2/preprocessing/resampling/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/resampling 2023-09-30T00:17:06,475 copying build/lib/nnunetv2/preprocessing/resampling/default_resampling.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/resampling 2023-09-30T00:17:06,478 creating build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/preprocessors 2023-09-30T00:17:06,479 copying build/lib/nnunetv2/preprocessing/preprocessors/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/preprocessors 2023-09-30T00:17:06,481 copying build/lib/nnunetv2/preprocessing/preprocessors/default_preprocessor.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/preprocessors 2023-09-30T00:17:06,483 copying build/lib/nnunetv2/preprocessing/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing 2023-09-30T00:17:06,485 creating build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/cropping 2023-09-30T00:17:06,486 copying build/lib/nnunetv2/preprocessing/cropping/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/cropping 2023-09-30T00:17:06,488 copying build/lib/nnunetv2/preprocessing/cropping/cropping.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/cropping 2023-09-30T00:17:06,490 creating build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/normalization 2023-09-30T00:17:06,491 copying build/lib/nnunetv2/preprocessing/normalization/map_channel_name_to_normalization.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/normalization 2023-09-30T00:17:06,493 copying build/lib/nnunetv2/preprocessing/normalization/default_normalization_schemes.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/normalization 2023-09-30T00:17:06,494 copying build/lib/nnunetv2/preprocessing/normalization/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/preprocessing/normalization 2023-09-30T00:17:06,496 copying build/lib/nnunetv2/paths.py -> build/bdist.linux-armv7l/wheel/nnunetv2 2023-09-30T00:17:06,498 creating build/bdist.linux-armv7l/wheel/nnunetv2/training 2023-09-30T00:17:06,500 creating build/bdist.linux-armv7l/wheel/nnunetv2/training/logging 2023-09-30T00:17:06,501 copying build/lib/nnunetv2/training/logging/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/logging 2023-09-30T00:17:06,502 copying build/lib/nnunetv2/training/logging/nnunet_logger.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/logging 2023-09-30T00:17:06,505 creating build/bdist.linux-armv7l/wheel/nnunetv2/training/lr_scheduler 2023-09-30T00:17:06,506 copying build/lib/nnunetv2/training/lr_scheduler/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/lr_scheduler 2023-09-30T00:17:06,507 copying build/lib/nnunetv2/training/lr_scheduler/polylr.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/lr_scheduler 2023-09-30T00:17:06,509 copying build/lib/nnunetv2/training/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training 2023-09-30T00:17:06,511 creating build/bdist.linux-armv7l/wheel/nnunetv2/training/loss 2023-09-30T00:17:06,511 copying build/lib/nnunetv2/training/loss/deep_supervision.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/loss 2023-09-30T00:17:06,513 copying build/lib/nnunetv2/training/loss/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/loss 2023-09-30T00:17:06,515 copying build/lib/nnunetv2/training/loss/compound_losses.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/loss 2023-09-30T00:17:06,517 copying build/lib/nnunetv2/training/loss/dice.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/loss 2023-09-30T00:17:06,519 copying build/lib/nnunetv2/training/loss/robust_ce_loss.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/loss 2023-09-30T00:17:06,521 creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer 2023-09-30T00:17:06,522 copying build/lib/nnunetv2/training/nnUNetTrainer/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer 2023-09-30T00:17:06,524 creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants 2023-09-30T00:17:06,525 creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/benchmarking 2023-09-30T00:17:06,526 copying build/lib/nnunetv2/training/nnUNetTrainer/variants/benchmarking/nnUNetTrainerBenchmark_5epochs.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/benchmarking 2023-09-30T00:17:06,528 copying build/lib/nnunetv2/training/nnUNetTrainer/variants/benchmarking/nnUNetTrainerBenchmark_5epochs_noDataLoading.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/benchmarking 2023-09-30T00:17:06,530 copying build/lib/nnunetv2/training/nnUNetTrainer/variants/benchmarking/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/benchmarking 2023-09-30T00:17:06,532 creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/sampling 2023-09-30T00:17:06,533 copying build/lib/nnunetv2/training/nnUNetTrainer/variants/sampling/nnUNetTrainer_probabilisticOversampling.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/sampling 2023-09-30T00:17:06,535 copying build/lib/nnunetv2/training/nnUNetTrainer/variants/sampling/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/sampling 2023-09-30T00:17:06,537 creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/training_length 2023-09-30T00:17:06,538 copying build/lib/nnunetv2/training/nnUNetTrainer/variants/training_length/nnUNetTrainer_Xepochs_NoMirroring.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/training_length 2023-09-30T00:17:06,540 copying build/lib/nnunetv2/training/nnUNetTrainer/variants/training_length/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/training_length 2023-09-30T00:17:06,542 copying build/lib/nnunetv2/training/nnUNetTrainer/variants/training_length/nnUNetTrainer_Xepochs.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/training_length 2023-09-30T00:17:06,544 copying build/lib/nnunetv2/training/nnUNetTrainer/variants/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants 2023-09-30T00:17:06,546 creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/optimizer 2023-09-30T00:17:06,547 copying build/lib/nnunetv2/training/nnUNetTrainer/variants/optimizer/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/optimizer 2023-09-30T00:17:06,548 copying build/lib/nnunetv2/training/nnUNetTrainer/variants/optimizer/nnUNetTrainerAdan.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/optimizer 2023-09-30T00:17:06,550 copying build/lib/nnunetv2/training/nnUNetTrainer/variants/optimizer/nnUNetTrainerAdam.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/optimizer 2023-09-30T00:17:06,552 creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/loss 2023-09-30T00:17:06,553 copying build/lib/nnunetv2/training/nnUNetTrainer/variants/loss/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/loss 2023-09-30T00:17:06,554 copying build/lib/nnunetv2/training/nnUNetTrainer/variants/loss/nnUNetTrainerCELoss.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/loss 2023-09-30T00:17:06,556 copying build/lib/nnunetv2/training/nnUNetTrainer/variants/loss/nnUNetTrainerTopkLoss.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/loss 2023-09-30T00:17:06,558 copying build/lib/nnunetv2/training/nnUNetTrainer/variants/loss/nnUNetTrainerDiceLoss.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/loss 2023-09-30T00:17:06,560 creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/lr_schedule 2023-09-30T00:17:06,561 copying build/lib/nnunetv2/training/nnUNetTrainer/variants/lr_schedule/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/lr_schedule 2023-09-30T00:17:06,562 copying build/lib/nnunetv2/training/nnUNetTrainer/variants/lr_schedule/nnUNetTrainerCosAnneal.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/lr_schedule 2023-09-30T00:17:06,564 creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/data_augmentation 2023-09-30T00:17:06,565 copying build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/data_augmentation 2023-09-30T00:17:06,567 copying build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerDA5.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/data_augmentation 2023-09-30T00:17:06,569 copying build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerNoMirroring.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/data_augmentation 2023-09-30T00:17:06,571 copying build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerDAOrd0.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/data_augmentation 2023-09-30T00:17:06,573 copying build/lib/nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerNoDA.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/data_augmentation 2023-09-30T00:17:06,575 creating build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/network_architecture 2023-09-30T00:17:06,576 copying build/lib/nnunetv2/training/nnUNetTrainer/variants/network_architecture/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/network_architecture 2023-09-30T00:17:06,578 copying build/lib/nnunetv2/training/nnUNetTrainer/variants/network_architecture/nnUNetTrainerBN.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/network_architecture 2023-09-30T00:17:06,580 copying build/lib/nnunetv2/training/nnUNetTrainer/variants/network_architecture/nnUNetTrainerNoDeepSupervision.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer/variants/network_architecture 2023-09-30T00:17:06,582 copying build/lib/nnunetv2/training/nnUNetTrainer/nnUNetTrainer.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/nnUNetTrainer 2023-09-30T00:17:06,586 creating build/bdist.linux-armv7l/wheel/nnunetv2/training/dataloading 2023-09-30T00:17:06,587 copying build/lib/nnunetv2/training/dataloading/nnunet_dataset.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/dataloading 2023-09-30T00:17:06,589 copying build/lib/nnunetv2/training/dataloading/base_data_loader.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/dataloading 2023-09-30T00:17:06,592 copying build/lib/nnunetv2/training/dataloading/utils.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/dataloading 2023-09-30T00:17:06,593 copying build/lib/nnunetv2/training/dataloading/data_loader_2d.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/dataloading 2023-09-30T00:17:06,596 copying build/lib/nnunetv2/training/dataloading/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/dataloading 2023-09-30T00:17:06,597 copying build/lib/nnunetv2/training/dataloading/data_loader_3d.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/dataloading 2023-09-30T00:17:06,599 creating build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation 2023-09-30T00:17:06,600 copying build/lib/nnunetv2/training/data_augmentation/compute_initial_patch_size.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation 2023-09-30T00:17:06,602 copying build/lib/nnunetv2/training/data_augmentation/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation 2023-09-30T00:17:06,604 creating build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation/custom_transforms 2023-09-30T00:17:06,605 copying build/lib/nnunetv2/training/data_augmentation/custom_transforms/limited_length_multithreaded_augmenter.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation/custom_transforms 2023-09-30T00:17:06,606 copying build/lib/nnunetv2/training/data_augmentation/custom_transforms/region_based_training.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation/custom_transforms 2023-09-30T00:17:06,608 copying build/lib/nnunetv2/training/data_augmentation/custom_transforms/transforms_for_dummy_2d.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation/custom_transforms 2023-09-30T00:17:06,610 copying build/lib/nnunetv2/training/data_augmentation/custom_transforms/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation/custom_transforms 2023-09-30T00:17:06,611 copying build/lib/nnunetv2/training/data_augmentation/custom_transforms/masking.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation/custom_transforms 2023-09-30T00:17:06,613 copying build/lib/nnunetv2/training/data_augmentation/custom_transforms/deep_supervision_donwsampling.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation/custom_transforms 2023-09-30T00:17:06,615 copying build/lib/nnunetv2/training/data_augmentation/custom_transforms/cascade_transforms.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation/custom_transforms 2023-09-30T00:17:06,617 copying build/lib/nnunetv2/training/data_augmentation/custom_transforms/manipulating_data_dict.py -> build/bdist.linux-armv7l/wheel/nnunetv2/training/data_augmentation/custom_transforms 2023-09-30T00:17:06,620 creating build/bdist.linux-armv7l/wheel/nnunetv2/imageio 2023-09-30T00:17:06,621 copying build/lib/nnunetv2/imageio/tif_reader_writer.py -> build/bdist.linux-armv7l/wheel/nnunetv2/imageio 2023-09-30T00:17:06,623 copying build/lib/nnunetv2/imageio/simpleitk_reader_writer.py -> build/bdist.linux-armv7l/wheel/nnunetv2/imageio 2023-09-30T00:17:06,625 copying build/lib/nnunetv2/imageio/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/imageio 2023-09-30T00:17:06,626 copying build/lib/nnunetv2/imageio/base_reader_writer.py -> build/bdist.linux-armv7l/wheel/nnunetv2/imageio 2023-09-30T00:17:06,628 copying build/lib/nnunetv2/imageio/natural_image_reager_writer.py -> build/bdist.linux-armv7l/wheel/nnunetv2/imageio 2023-09-30T00:17:06,630 copying build/lib/nnunetv2/imageio/nibabel_reader_writer.py -> build/bdist.linux-armv7l/wheel/nnunetv2/imageio 2023-09-30T00:17:06,633 copying build/lib/nnunetv2/imageio/reader_writer_registry.py -> build/bdist.linux-armv7l/wheel/nnunetv2/imageio 2023-09-30T00:17:06,635 creating build/bdist.linux-armv7l/wheel/nnunetv2/evaluation 2023-09-30T00:17:06,636 copying build/lib/nnunetv2/evaluation/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/evaluation 2023-09-30T00:17:06,637 copying build/lib/nnunetv2/evaluation/accumulate_cv_results.py -> build/bdist.linux-armv7l/wheel/nnunetv2/evaluation 2023-09-30T00:17:06,639 copying build/lib/nnunetv2/evaluation/evaluate_predictions.py -> build/bdist.linux-armv7l/wheel/nnunetv2/evaluation 2023-09-30T00:17:06,641 copying build/lib/nnunetv2/evaluation/find_best_configuration.py -> build/bdist.linux-armv7l/wheel/nnunetv2/evaluation 2023-09-30T00:17:06,644 creating build/bdist.linux-armv7l/wheel/nnunetv2/ensembling 2023-09-30T00:17:06,645 copying build/lib/nnunetv2/ensembling/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/ensembling 2023-09-30T00:17:06,646 copying build/lib/nnunetv2/ensembling/ensemble.py -> build/bdist.linux-armv7l/wheel/nnunetv2/ensembling 2023-09-30T00:17:06,649 creating build/bdist.linux-armv7l/wheel/nnunetv2/postprocessing 2023-09-30T00:17:06,649 copying build/lib/nnunetv2/postprocessing/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/postprocessing 2023-09-30T00:17:06,651 copying build/lib/nnunetv2/postprocessing/remove_connected_components.py -> build/bdist.linux-armv7l/wheel/nnunetv2/postprocessing 2023-09-30T00:17:06,654 creating build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion 2023-09-30T00:17:06,655 copying build/lib/nnunetv2/dataset_conversion/Dataset137_BraTS21.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion 2023-09-30T00:17:06,657 copying build/lib/nnunetv2/dataset_conversion/Dataset114_MNMs.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion 2023-09-30T00:17:06,659 copying build/lib/nnunetv2/dataset_conversion/convert_MSD_dataset.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion 2023-09-30T00:17:06,661 copying build/lib/nnunetv2/dataset_conversion/Dataset115_EMIDEC.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion 2023-09-30T00:17:06,663 copying build/lib/nnunetv2/dataset_conversion/generate_dataset_json.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion 2023-09-30T00:17:06,665 copying build/lib/nnunetv2/dataset_conversion/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion 2023-09-30T00:17:06,666 copying build/lib/nnunetv2/dataset_conversion/Dataset027_ACDC.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion 2023-09-30T00:17:06,668 copying build/lib/nnunetv2/dataset_conversion/Dataset219_Amos2022_task2.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion 2023-09-30T00:17:06,670 copying build/lib/nnunetv2/dataset_conversion/convert_raw_dataset_from_old_nnunet_format.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion 2023-09-30T00:17:06,671 copying build/lib/nnunetv2/dataset_conversion/Dataset218_Amos2022_task1.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion 2023-09-30T00:17:06,673 copying build/lib/nnunetv2/dataset_conversion/Dataset120_RoadSegmentation.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion 2023-09-30T00:17:06,675 copying build/lib/nnunetv2/dataset_conversion/Dataset073_Fluo_C3DH_A549_SIM.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion 2023-09-30T00:17:06,677 creating build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion/datasets_for_integration_tests 2023-09-30T00:17:06,678 copying build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset999_IntegrationTest_Hippocampus.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion/datasets_for_integration_tests 2023-09-30T00:17:06,680 copying build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset997_IntegrationTest_Hippocampus_regions.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion/datasets_for_integration_tests 2023-09-30T00:17:06,682 copying build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests/__init__.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion/datasets_for_integration_tests 2023-09-30T00:17:06,684 copying build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset996_IntegrationTest_Hippocampus_regions_ignore.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion/datasets_for_integration_tests 2023-09-30T00:17:06,685 copying build/lib/nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset998_IntegrationTest_Hippocampus_ignore.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion/datasets_for_integration_tests 2023-09-30T00:17:06,687 copying build/lib/nnunetv2/dataset_conversion/Dataset988_dummyDataset4.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion 2023-09-30T00:17:06,689 copying build/lib/nnunetv2/dataset_conversion/Dataset220_KiTS2023.py -> build/bdist.linux-armv7l/wheel/nnunetv2/dataset_conversion 2023-09-30T00:17:06,690 running install_egg_info 2023-09-30T00:17:06,695 Copying nnunetv2.egg-info to build/bdist.linux-armv7l/wheel/nnunetv2-2.1.2-py3.11.egg-info 2023-09-30T00:17:06,707 running install_scripts 2023-09-30T00:17:06,728 creating build/bdist.linux-armv7l/wheel/nnunetv2-2.1.2.dist-info/WHEEL 2023-09-30T00:17:06,730 creating '/tmp/pip-wheel-r5ydtnwp/.tmp-7k0jhmuo/nnunetv2-2.1.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-09-30T00:17:06,733 adding 'nnunetv2/__init__.py' 2023-09-30T00:17:06,734 adding 'nnunetv2/configuration.py' 2023-09-30T00:17:06,735 adding 'nnunetv2/paths.py' 2023-09-30T00:17:06,737 adding 'nnunetv2/batch_running/__init__.py' 2023-09-30T00:17:06,739 adding 'nnunetv2/batch_running/collect_results_custom_Decathlon.py' 2023-09-30T00:17:06,740 adding 'nnunetv2/batch_running/collect_results_custom_Decathlon_2d.py' 2023-09-30T00:17:06,742 adding 'nnunetv2/batch_running/generate_lsf_runs_customDecathlon.py' 2023-09-30T00:17:06,744 adding 'nnunetv2/batch_running/benchmarking/__init__.py' 2023-09-30T00:17:06,745 adding 'nnunetv2/batch_running/benchmarking/generate_benchmarking_commands.py' 2023-09-30T00:17:06,747 adding 'nnunetv2/batch_running/benchmarking/summarize_benchmark_results.py' 2023-09-30T00:17:06,748 adding 'nnunetv2/batch_running/release_trainings/__init__.py' 2023-09-30T00:17:06,750 adding 'nnunetv2/batch_running/release_trainings/nnunetv2_v1/__init__.py' 2023-09-30T00:17:06,751 adding 'nnunetv2/batch_running/release_trainings/nnunetv2_v1/collect_results.py' 2023-09-30T00:17:06,753 adding 'nnunetv2/batch_running/release_trainings/nnunetv2_v1/generate_lsf_commands.py' 2023-09-30T00:17:06,755 adding 'nnunetv2/dataset_conversion/Dataset027_ACDC.py' 2023-09-30T00:17:06,756 adding 'nnunetv2/dataset_conversion/Dataset073_Fluo_C3DH_A549_SIM.py' 2023-09-30T00:17:06,758 adding 'nnunetv2/dataset_conversion/Dataset114_MNMs.py' 2023-09-30T00:17:06,760 adding 'nnunetv2/dataset_conversion/Dataset115_EMIDEC.py' 2023-09-30T00:17:06,761 adding 'nnunetv2/dataset_conversion/Dataset120_RoadSegmentation.py' 2023-09-30T00:17:06,762 adding 'nnunetv2/dataset_conversion/Dataset137_BraTS21.py' 2023-09-30T00:17:06,764 adding 'nnunetv2/dataset_conversion/Dataset218_Amos2022_task1.py' 2023-09-30T00:17:06,765 adding 'nnunetv2/dataset_conversion/Dataset219_Amos2022_task2.py' 2023-09-30T00:17:06,767 adding 'nnunetv2/dataset_conversion/Dataset220_KiTS2023.py' 2023-09-30T00:17:06,768 adding 'nnunetv2/dataset_conversion/Dataset988_dummyDataset4.py' 2023-09-30T00:17:06,769 adding 'nnunetv2/dataset_conversion/__init__.py' 2023-09-30T00:17:06,771 adding 'nnunetv2/dataset_conversion/convert_MSD_dataset.py' 2023-09-30T00:17:06,772 adding 'nnunetv2/dataset_conversion/convert_raw_dataset_from_old_nnunet_format.py' 2023-09-30T00:17:06,773 adding 'nnunetv2/dataset_conversion/generate_dataset_json.py' 2023-09-30T00:17:06,776 adding 'nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset996_IntegrationTest_Hippocampus_regions_ignore.py' 2023-09-30T00:17:06,777 adding 'nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset997_IntegrationTest_Hippocampus_regions.py' 2023-09-30T00:17:06,778 adding 'nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset998_IntegrationTest_Hippocampus_ignore.py' 2023-09-30T00:17:06,779 adding 'nnunetv2/dataset_conversion/datasets_for_integration_tests/Dataset999_IntegrationTest_Hippocampus.py' 2023-09-30T00:17:06,780 adding 'nnunetv2/dataset_conversion/datasets_for_integration_tests/__init__.py' 2023-09-30T00:17:06,782 adding 'nnunetv2/ensembling/__init__.py' 2023-09-30T00:17:06,784 adding 'nnunetv2/ensembling/ensemble.py' 2023-09-30T00:17:06,785 adding 'nnunetv2/evaluation/__init__.py' 2023-09-30T00:17:06,786 adding 'nnunetv2/evaluation/accumulate_cv_results.py' 2023-09-30T00:17:06,789 adding 'nnunetv2/evaluation/evaluate_predictions.py' 2023-09-30T00:17:06,791 adding 'nnunetv2/evaluation/find_best_configuration.py' 2023-09-30T00:17:06,793 adding 'nnunetv2/experiment_planning/__init__.py' 2023-09-30T00:17:06,795 adding 'nnunetv2/experiment_planning/plan_and_preprocess_api.py' 2023-09-30T00:17:06,796 adding 'nnunetv2/experiment_planning/plan_and_preprocess_entrypoints.py' 2023-09-30T00:17:06,799 adding 'nnunetv2/experiment_planning/verify_dataset_integrity.py' 2023-09-30T00:17:06,800 adding 'nnunetv2/experiment_planning/dataset_fingerprint/__init__.py' 2023-09-30T00:17:06,802 adding 'nnunetv2/experiment_planning/dataset_fingerprint/fingerprint_extractor.py' 2023-09-30T00:17:06,804 adding 'nnunetv2/experiment_planning/experiment_planners/__init__.py' 2023-09-30T00:17:06,807 adding 'nnunetv2/experiment_planning/experiment_planners/default_experiment_planner.py' 2023-09-30T00:17:06,809 adding 'nnunetv2/experiment_planning/experiment_planners/network_topology.py' 2023-09-30T00:17:06,810 adding 'nnunetv2/experiment_planning/experiment_planners/resencUNet_planner.py' 2023-09-30T00:17:06,812 adding 'nnunetv2/experiment_planning/plans_for_pretraining/__init__.py' 2023-09-30T00:17:06,813 adding 'nnunetv2/experiment_planning/plans_for_pretraining/move_plans_between_datasets.py' 2023-09-30T00:17:06,815 adding 'nnunetv2/imageio/__init__.py' 2023-09-30T00:17:06,817 adding 'nnunetv2/imageio/base_reader_writer.py' 2023-09-30T00:17:06,818 adding 'nnunetv2/imageio/natural_image_reager_writer.py' 2023-09-30T00:17:06,820 adding 'nnunetv2/imageio/nibabel_reader_writer.py' 2023-09-30T00:17:06,821 adding 'nnunetv2/imageio/reader_writer_registry.py' 2023-09-30T00:17:06,823 adding 'nnunetv2/imageio/simpleitk_reader_writer.py' 2023-09-30T00:17:06,824 adding 'nnunetv2/imageio/tif_reader_writer.py' 2023-09-30T00:17:06,826 adding 'nnunetv2/inference/__init__.py' 2023-09-30T00:17:06,828 adding 'nnunetv2/inference/data_iterators.py' 2023-09-30T00:17:06,830 adding 'nnunetv2/inference/examples.py' 2023-09-30T00:17:06,831 adding 'nnunetv2/inference/export_prediction.py' 2023-09-30T00:17:06,836 adding 'nnunetv2/inference/predict_from_raw_data.py' 2023-09-30T00:17:06,838 adding 'nnunetv2/inference/sliding_window_prediction.py' 2023-09-30T00:17:06,840 adding 'nnunetv2/model_sharing/__init__.py' 2023-09-30T00:17:06,841 adding 'nnunetv2/model_sharing/entry_points.py' 2023-09-30T00:17:06,842 adding 'nnunetv2/model_sharing/model_download.py' 2023-09-30T00:17:06,844 adding 'nnunetv2/model_sharing/model_export.py' 2023-09-30T00:17:06,845 adding 'nnunetv2/model_sharing/model_import.py' 2023-09-30T00:17:06,847 adding 'nnunetv2/postprocessing/__init__.py' 2023-09-30T00:17:06,849 adding 'nnunetv2/postprocessing/remove_connected_components.py' 2023-09-30T00:17:06,851 adding 'nnunetv2/preprocessing/__init__.py' 2023-09-30T00:17:06,853 adding 'nnunetv2/preprocessing/cropping/__init__.py' 2023-09-30T00:17:06,854 adding 'nnunetv2/preprocessing/cropping/cropping.py' 2023-09-30T00:17:06,856 adding 'nnunetv2/preprocessing/normalization/__init__.py' 2023-09-30T00:17:06,857 adding 'nnunetv2/preprocessing/normalization/default_normalization_schemes.py' 2023-09-30T00:17:06,858 adding 'nnunetv2/preprocessing/normalization/map_channel_name_to_normalization.py' 2023-09-30T00:17:06,860 adding 'nnunetv2/preprocessing/preprocessors/__init__.py' 2023-09-30T00:17:06,862 adding 'nnunetv2/preprocessing/preprocessors/default_preprocessor.py' 2023-09-30T00:17:06,864 adding 'nnunetv2/preprocessing/resampling/__init__.py' 2023-09-30T00:17:06,866 adding 'nnunetv2/preprocessing/resampling/default_resampling.py' 2023-09-30T00:17:06,867 adding 'nnunetv2/preprocessing/resampling/utils.py' 2023-09-30T00:17:06,868 adding 'nnunetv2/run/__init__.py' 2023-09-30T00:17:06,870 adding 'nnunetv2/run/load_pretrained_weights.py' 2023-09-30T00:17:06,872 adding 'nnunetv2/run/run_training.py' 2023-09-30T00:17:06,873 adding 'nnunetv2/tests/__init__.py' 2023-09-30T00:17:06,875 adding 'nnunetv2/tests/integration_tests/__init__.py' 2023-09-30T00:17:06,876 adding 'nnunetv2/tests/integration_tests/add_lowres_and_cascade.py' 2023-09-30T00:17:06,877 adding 'nnunetv2/tests/integration_tests/cleanup_integration_test.py' 2023-09-30T00:17:06,878 adding 'nnunetv2/tests/integration_tests/run_integration_test_bestconfig_inference.py' 2023-09-30T00:17:06,880 adding 'nnunetv2/training/__init__.py' 2023-09-30T00:17:06,881 adding 'nnunetv2/training/data_augmentation/__init__.py' 2023-09-30T00:17:06,883 adding 'nnunetv2/training/data_augmentation/compute_initial_patch_size.py' 2023-09-30T00:17:06,884 adding 'nnunetv2/training/data_augmentation/custom_transforms/__init__.py' 2023-09-30T00:17:06,886 adding 'nnunetv2/training/data_augmentation/custom_transforms/cascade_transforms.py' 2023-09-30T00:17:06,887 adding 'nnunetv2/training/data_augmentation/custom_transforms/deep_supervision_donwsampling.py' 2023-09-30T00:17:06,888 adding 'nnunetv2/training/data_augmentation/custom_transforms/limited_length_multithreaded_augmenter.py' 2023-09-30T00:17:06,889 adding 'nnunetv2/training/data_augmentation/custom_transforms/manipulating_data_dict.py' 2023-09-30T00:17:06,890 adding 'nnunetv2/training/data_augmentation/custom_transforms/masking.py' 2023-09-30T00:17:06,892 adding 'nnunetv2/training/data_augmentation/custom_transforms/region_based_training.py' 2023-09-30T00:17:06,893 adding 'nnunetv2/training/data_augmentation/custom_transforms/transforms_for_dummy_2d.py' 2023-09-30T00:17:06,895 adding 'nnunetv2/training/dataloading/__init__.py' 2023-09-30T00:17:06,896 adding 'nnunetv2/training/dataloading/base_data_loader.py' 2023-09-30T00:17:06,898 adding 'nnunetv2/training/dataloading/data_loader_2d.py' 2023-09-30T00:17:06,899 adding 'nnunetv2/training/dataloading/data_loader_3d.py' 2023-09-30T00:17:06,901 adding 'nnunetv2/training/dataloading/nnunet_dataset.py' 2023-09-30T00:17:06,902 adding 'nnunetv2/training/dataloading/utils.py' 2023-09-30T00:17:06,904 adding 'nnunetv2/training/logging/__init__.py' 2023-09-30T00:17:06,905 adding 'nnunetv2/training/logging/nnunet_logger.py' 2023-09-30T00:17:06,907 adding 'nnunetv2/training/loss/__init__.py' 2023-09-30T00:17:06,908 adding 'nnunetv2/training/loss/compound_losses.py' 2023-09-30T00:17:06,910 adding 'nnunetv2/training/loss/deep_supervision.py' 2023-09-30T00:17:06,911 adding 'nnunetv2/training/loss/dice.py' 2023-09-30T00:17:06,912 adding 'nnunetv2/training/loss/robust_ce_loss.py' 2023-09-30T00:17:06,914 adding 'nnunetv2/training/lr_scheduler/__init__.py' 2023-09-30T00:17:06,915 adding 'nnunetv2/training/lr_scheduler/polylr.py' 2023-09-30T00:17:06,917 adding 'nnunetv2/training/nnUNetTrainer/__init__.py' 2023-09-30T00:17:06,924 adding 'nnunetv2/training/nnUNetTrainer/nnUNetTrainer.py' 2023-09-30T00:17:06,926 adding 'nnunetv2/training/nnUNetTrainer/variants/__init__.py' 2023-09-30T00:17:06,928 adding 'nnunetv2/training/nnUNetTrainer/variants/benchmarking/__init__.py' 2023-09-30T00:17:06,929 adding 'nnunetv2/training/nnUNetTrainer/variants/benchmarking/nnUNetTrainerBenchmark_5epochs.py' 2023-09-30T00:17:06,931 adding 'nnunetv2/training/nnUNetTrainer/variants/benchmarking/nnUNetTrainerBenchmark_5epochs_noDataLoading.py' 2023-09-30T00:17:06,932 adding 'nnunetv2/training/nnUNetTrainer/variants/data_augmentation/__init__.py' 2023-09-30T00:17:06,934 adding 'nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerDA5.py' 2023-09-30T00:17:06,936 adding 'nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerDAOrd0.py' 2023-09-30T00:17:06,937 adding 'nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerNoDA.py' 2023-09-30T00:17:06,938 adding 'nnunetv2/training/nnUNetTrainer/variants/data_augmentation/nnUNetTrainerNoMirroring.py' 2023-09-30T00:17:06,940 adding 'nnunetv2/training/nnUNetTrainer/variants/loss/__init__.py' 2023-09-30T00:17:06,941 adding 'nnunetv2/training/nnUNetTrainer/variants/loss/nnUNetTrainerCELoss.py' 2023-09-30T00:17:06,942 adding 'nnunetv2/training/nnUNetTrainer/variants/loss/nnUNetTrainerDiceLoss.py' 2023-09-30T00:17:06,944 adding 'nnunetv2/training/nnUNetTrainer/variants/loss/nnUNetTrainerTopkLoss.py' 2023-09-30T00:17:06,945 adding 'nnunetv2/training/nnUNetTrainer/variants/lr_schedule/__init__.py' 2023-09-30T00:17:06,946 adding 'nnunetv2/training/nnUNetTrainer/variants/lr_schedule/nnUNetTrainerCosAnneal.py' 2023-09-30T00:17:06,948 adding 'nnunetv2/training/nnUNetTrainer/variants/network_architecture/__init__.py' 2023-09-30T00:17:06,949 adding 'nnunetv2/training/nnUNetTrainer/variants/network_architecture/nnUNetTrainerBN.py' 2023-09-30T00:17:06,950 adding 'nnunetv2/training/nnUNetTrainer/variants/network_architecture/nnUNetTrainerNoDeepSupervision.py' 2023-09-30T00:17:06,952 adding 'nnunetv2/training/nnUNetTrainer/variants/optimizer/__init__.py' 2023-09-30T00:17:06,953 adding 'nnunetv2/training/nnUNetTrainer/variants/optimizer/nnUNetTrainerAdam.py' 2023-09-30T00:17:06,955 adding 'nnunetv2/training/nnUNetTrainer/variants/optimizer/nnUNetTrainerAdan.py' 2023-09-30T00:17:06,956 adding 'nnunetv2/training/nnUNetTrainer/variants/sampling/__init__.py' 2023-09-30T00:17:06,957 adding 'nnunetv2/training/nnUNetTrainer/variants/sampling/nnUNetTrainer_probabilisticOversampling.py' 2023-09-30T00:17:06,959 adding 'nnunetv2/training/nnUNetTrainer/variants/training_length/__init__.py' 2023-09-30T00:17:06,960 adding 'nnunetv2/training/nnUNetTrainer/variants/training_length/nnUNetTrainer_Xepochs.py' 2023-09-30T00:17:06,962 adding 'nnunetv2/training/nnUNetTrainer/variants/training_length/nnUNetTrainer_Xepochs_NoMirroring.py' 2023-09-30T00:17:06,963 adding 'nnunetv2/utilities/__init__.py' 2023-09-30T00:17:06,964 adding 'nnunetv2/utilities/collate_outputs.py' 2023-09-30T00:17:06,966 adding 'nnunetv2/utilities/dataset_name_id_conversion.py' 2023-09-30T00:17:06,967 adding 'nnunetv2/utilities/ddp_allgather.py' 2023-09-30T00:17:06,968 adding 'nnunetv2/utilities/default_n_proc_DA.py' 2023-09-30T00:17:06,970 adding 'nnunetv2/utilities/file_path_utilities.py' 2023-09-30T00:17:06,971 adding 'nnunetv2/utilities/find_class_by_name.py' 2023-09-30T00:17:06,972 adding 'nnunetv2/utilities/get_network_from_plans.py' 2023-09-30T00:17:06,974 adding 'nnunetv2/utilities/helpers.py' 2023-09-30T00:17:06,975 adding 'nnunetv2/utilities/json_export.py' 2023-09-30T00:17:06,976 adding 'nnunetv2/utilities/network_initialization.py' 2023-09-30T00:17:06,978 adding 'nnunetv2/utilities/overlay_plots.py' 2023-09-30T00:17:06,980 adding 'nnunetv2/utilities/utils.py' 2023-09-30T00:17:06,981 adding 'nnunetv2/utilities/label_handling/__init__.py' 2023-09-30T00:17:06,983 adding 'nnunetv2/utilities/label_handling/label_handling.py' 2023-09-30T00:17:06,985 adding 'nnunetv2/utilities/plans_handling/__init__.py' 2023-09-30T00:17:06,987 adding 'nnunetv2/utilities/plans_handling/plans_handler.py' 2023-09-30T00:17:06,990 adding 'nnunetv2-2.1.2.dist-info/LICENSE' 2023-09-30T00:17:06,994 adding 'nnunetv2-2.1.2.dist-info/METADATA' 2023-09-30T00:17:06,995 adding 'nnunetv2-2.1.2.dist-info/WHEEL' 2023-09-30T00:17:06,996 adding 'nnunetv2-2.1.2.dist-info/entry_points.txt' 2023-09-30T00:17:06,997 adding 'nnunetv2-2.1.2.dist-info/top_level.txt' 2023-09-30T00:17:07,000 adding 'nnunetv2-2.1.2.dist-info/RECORD' 2023-09-30T00:17:07,005 removing build/bdist.linux-armv7l/wheel 2023-09-30T00:17:07,173 Building wheel for nnunetv2 (pyproject.toml): finished with status 'done' 2023-09-30T00:17:07,182 Created wheel for nnunetv2: filename=nnunetv2-2.1.2-py3-none-any.whl size=235978 sha256=cbd7dda5e9ec83dff80a22a1493aee15145e11cabc0783dd921d613484f08b77 2023-09-30T00:17:07,184 Stored in directory: /tmp/pip-ephem-wheel-cache-tvbb0zvt/wheels/aa/0e/3d/23016c086978d0547b0631593ef890f718d736e34db4c53a8c 2023-09-30T00:17:07,207 Successfully built nnunetv2 2023-09-30T00:17:07,216 Removed build tracker: '/tmp/pip-build-tracker-pp78gc8z'