2023-10-01T05:17:34,854 Created temporary directory: /tmp/pip-build-tracker-3w9_e7rm 2023-10-01T05:17:34,855 Initialized build tracking at /tmp/pip-build-tracker-3w9_e7rm 2023-10-01T05:17:34,855 Created build tracker: /tmp/pip-build-tracker-3w9_e7rm 2023-10-01T05:17:34,856 Entered build tracker: /tmp/pip-build-tracker-3w9_e7rm 2023-10-01T05:17:34,857 Created temporary directory: /tmp/pip-wheel-bat7nf9e 2023-10-01T05:17:34,860 Created temporary directory: /tmp/pip-ephem-wheel-cache-waynv4tk 2023-10-01T05:17:34,882 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-10-01T05:17:34,886 2 location(s) to search for versions of brighteyes-ism: 2023-10-01T05:17:34,886 * https://pypi.org/simple/brighteyes-ism/ 2023-10-01T05:17:34,886 * https://www.piwheels.org/simple/brighteyes-ism/ 2023-10-01T05:17:34,887 Fetching project page and analyzing links: https://pypi.org/simple/brighteyes-ism/ 2023-10-01T05:17:34,888 Getting page https://pypi.org/simple/brighteyes-ism/ 2023-10-01T05:17:34,889 Found index url https://pypi.org/simple/ 2023-10-01T05:17:35,106 Fetched page https://pypi.org/simple/brighteyes-ism/ as application/vnd.pypi.simple.v1+json 2023-10-01T05:17:35,112 Found link https://files.pythonhosted.org/packages/f4/e0/011daa2aa9f45d7440f6be06b4502364eb07d529d7c649caef750a3ccecc/brighteyes-ism-0.1.0.tar.gz (from https://pypi.org/simple/brighteyes-ism/) (requires-python:>=3.10), version: 0.1.0 2023-10-01T05:17:35,112 Skipping link: No binaries permitted for brighteyes-ism: https://files.pythonhosted.org/packages/4f/cf/56176e9a9bb1e7a95d21e5e2916ddd6b0529296cfea865fcdcb4855b58d9/brighteyes_ism-0.1.0-py3-none-any.whl (from https://pypi.org/simple/brighteyes-ism/) (requires-python:>=3.10) 2023-10-01T05:17:35,113 Found link https://files.pythonhosted.org/packages/3f/d5/79f1041ce9a9932655851e936c010f033fa653d71626188e3c004d452eef/brighteyes-ism-0.1.1.tar.gz (from https://pypi.org/simple/brighteyes-ism/) (requires-python:>=3.10), version: 0.1.1 2023-10-01T05:17:35,114 Skipping link: No binaries permitted for brighteyes-ism: https://files.pythonhosted.org/packages/82/ff/bc43d883d9194d2a9f915dd5775cb4093df13f046ea8231e58748162bb82/brighteyes_ism-0.1.1-py3-none-any.whl (from https://pypi.org/simple/brighteyes-ism/) (requires-python:>=3.10) 2023-10-01T05:17:35,115 Found link https://files.pythonhosted.org/packages/70/fd/96d860689afc78a08d43e113c0feb1cad64bee68ea6ed20894fefbed2d1a/brighteyes-ism-1.0.0.tar.gz (from https://pypi.org/simple/brighteyes-ism/) (requires-python:>=3.8), version: 1.0.0 2023-10-01T05:17:35,116 Skipping link: No binaries permitted for brighteyes-ism: https://files.pythonhosted.org/packages/a7/fe/8a81360de1d15191a961b4e7091fb0c409becdc4b264a17aae61c1811430/brighteyes_ism-1.0.0-py3-none-any.whl (from https://pypi.org/simple/brighteyes-ism/) (requires-python:>=3.8) 2023-10-01T05:17:35,117 Found link https://files.pythonhosted.org/packages/23/6a/c8d475dc148aa519f1c436634108a5f8329f3b5d92151774f6a1d04871d2/brighteyes-ism-1.0.1.tar.gz (from https://pypi.org/simple/brighteyes-ism/) (requires-python:>=3.7), version: 1.0.1 2023-10-01T05:17:35,117 Skipping link: No binaries permitted for brighteyes-ism: https://files.pythonhosted.org/packages/0f/62/959540a20ca63bff0727f2b8db9efabed8653d757b0878790b7a282b230a/brighteyes_ism-1.0.1-py3-none-any.whl (from https://pypi.org/simple/brighteyes-ism/) (requires-python:>=3.7) 2023-10-01T05:17:35,118 Found link https://files.pythonhosted.org/packages/23/d8/67abe104467fdd1a37e9ac8857b9ee333a637b1bd7462f2b03284a7aab9a/brighteyes-ism-1.0.2.tar.gz (from https://pypi.org/simple/brighteyes-ism/) (requires-python:>=3.7), version: 1.0.2 2023-10-01T05:17:35,119 Skipping link: No binaries permitted for brighteyes-ism: https://files.pythonhosted.org/packages/f6/18/2496e418cc602b8d61563af3423140aa3b99b1a32611aa2073d5f7257851/brighteyes_ism-1.0.2-py3-none-any.whl (from https://pypi.org/simple/brighteyes-ism/) (requires-python:>=3.7) 2023-10-01T05:17:35,120 Found link https://files.pythonhosted.org/packages/fb/51/c743dbd765382353b792b86b4aad3f47b4eec11dd444fc7fce63e4e7cd15/brighteyes-ism-1.1.0.tar.gz (from https://pypi.org/simple/brighteyes-ism/) (requires-python:>=3.7), version: 1.1.0 2023-10-01T05:17:35,121 Skipping link: No binaries permitted for brighteyes-ism: https://files.pythonhosted.org/packages/ee/e1/75739980d3f0abb9b3eb7af84319c0fa953c32cc81c85dc4093c32b7e4e2/brighteyes_ism-1.1.0-py3-none-any.whl (from https://pypi.org/simple/brighteyes-ism/) (requires-python:>=3.7) 2023-10-01T05:17:35,122 Found link https://files.pythonhosted.org/packages/f0/9b/3e41ee5f3f255c5127a219fe0d57127460da73496137f4cc0ca342b675a2/brighteyes-ism-1.1.1.tar.gz (from https://pypi.org/simple/brighteyes-ism/) (requires-python:>=3.7), version: 1.1.1 2023-10-01T05:17:35,123 Skipping link: No binaries permitted for brighteyes-ism: https://files.pythonhosted.org/packages/96/4f/bed5a62ad4e5401b5ee227d180473bf7e1e109a46125c46230e374dc4e52/brighteyes_ism-1.1.1-py3-none-any.whl (from https://pypi.org/simple/brighteyes-ism/) (requires-python:>=3.7) 2023-10-01T05:17:35,123 Found link https://files.pythonhosted.org/packages/d5/60/8312ac7b6285d819835e15fd75b54d576506bc5c56f95084d592e4f49ede/brighteyes-ism-1.1.2.tar.gz (from https://pypi.org/simple/brighteyes-ism/) (requires-python:>=3.7), version: 1.1.2 2023-10-01T05:17:35,124 Skipping link: No binaries permitted for brighteyes-ism: https://files.pythonhosted.org/packages/0f/52/981cb2247ee07bd5e669401577d0c90e1e45c4f3da4b6f801398663c8849/brighteyes_ism-1.1.2-py3-none-any.whl (from https://pypi.org/simple/brighteyes-ism/) (requires-python:>=3.7) 2023-10-01T05:17:35,125 Found link https://files.pythonhosted.org/packages/55/bf/f2f7b965eb522221d3719cffd41ce34b4d8ce7a9e3db18974655843e332f/brighteyes-ism-1.2.0.tar.gz (from https://pypi.org/simple/brighteyes-ism/) (requires-python:>=3.7), version: 1.2.0 2023-10-01T05:17:35,125 Skipping link: No binaries permitted for brighteyes-ism: https://files.pythonhosted.org/packages/d0/b8/5d8d25b8fa2a277e29a515038563184d5663555b9649391b40213067f9ad/brighteyes_ism-1.2.0-py3-none-any.whl (from https://pypi.org/simple/brighteyes-ism/) (requires-python:>=3.7) 2023-10-01T05:17:35,126 Found link https://files.pythonhosted.org/packages/3f/78/3d0bbef0f898d17b8abb586f4b8d758ba5ff19cd1f52de9e6467484f7685/brighteyes-ism-1.2.1.tar.gz (from https://pypi.org/simple/brighteyes-ism/) (requires-python:>=3.7), version: 1.2.1 2023-10-01T05:17:35,127 Skipping link: No binaries permitted for brighteyes-ism: https://files.pythonhosted.org/packages/5d/50/4c0453c8cc75ce414743503ce15c0904df1a36464a2161927fc6b1cb9b42/brighteyes_ism-1.2.1-py3-none-any.whl (from https://pypi.org/simple/brighteyes-ism/) (requires-python:>=3.7) 2023-10-01T05:17:35,128 Found link https://files.pythonhosted.org/packages/5e/48/c9efc16e8ebc845d6c29e6aa1d2b02e67203631d5bdae084938232ac133c/brighteyes-ism-1.2.2.tar.gz (from https://pypi.org/simple/brighteyes-ism/) (requires-python:>=3.7), version: 1.2.2 2023-10-01T05:17:35,128 Skipping link: No binaries permitted for brighteyes-ism: https://files.pythonhosted.org/packages/72/02/4268651f5cfa34ab15a0ca3801a779c713ad2db2d93c7be58abaf25e3f35/brighteyes_ism-1.2.2-py3-none-any.whl (from https://pypi.org/simple/brighteyes-ism/) (requires-python:>=3.7) 2023-10-01T05:17:35,129 Found link https://files.pythonhosted.org/packages/71/02/2399054e381a8cfb8299bc5b4165e115f1bf652841936ee4f3a00708b03f/brighteyes-ism-1.2.3.tar.gz (from https://pypi.org/simple/brighteyes-ism/) (requires-python:>=3.7), version: 1.2.3 2023-10-01T05:17:35,130 Skipping link: No binaries permitted for brighteyes-ism: https://files.pythonhosted.org/packages/6c/ec/b2185197cb44a74c26e3428323baa16747e9012890327cdb7176dba34eab/brighteyes_ism-1.2.3-py3-none-any.whl (from https://pypi.org/simple/brighteyes-ism/) (requires-python:>=3.7) 2023-10-01T05:17:35,132 Found link https://files.pythonhosted.org/packages/08/34/3c17f2ca1e4fcfaf046a6ec52b213eafd3137fa63df382db1de86da21a68/brighteyes-ism-1.2.4.tar.gz (from https://pypi.org/simple/brighteyes-ism/) (requires-python:>=3.7), version: 1.2.4 2023-10-01T05:17:35,132 Skipping link: No binaries permitted for brighteyes-ism: https://files.pythonhosted.org/packages/7d/81/d96149f2bec48b435e25d88f975dbaf413765f5c8df2893bbf808cc66486/brighteyes_ism-1.2.4-py3-none-any.whl (from https://pypi.org/simple/brighteyes-ism/) (requires-python:>=3.7) 2023-10-01T05:17:35,133 Fetching project page and analyzing links: https://www.piwheels.org/simple/brighteyes-ism/ 2023-10-01T05:17:35,134 Getting page https://www.piwheels.org/simple/brighteyes-ism/ 2023-10-01T05:17:35,135 Found index url https://www.piwheels.org/simple/ 2023-10-01T05:17:35,300 Fetched page https://www.piwheels.org/simple/brighteyes-ism/ as text/html 2023-10-01T05:17:35,304 Skipping link: No binaries permitted for brighteyes-ism: https://www.piwheels.org/simple/brighteyes-ism/brighteyes_ism-1.2.3-py3-none-any.whl#sha256=6b17c058c3918aa46a5c45954bd3ea926043646a4419a380a390c24d921818e9 (from https://www.piwheels.org/simple/brighteyes-ism/) (requires-python:>=3.7) 2023-10-01T05:17:35,304 Skipping link: No binaries permitted for brighteyes-ism: https://www.piwheels.org/simple/brighteyes-ism/brighteyes_ism-1.2.2-py3-none-any.whl#sha256=a23b48fc34acdee72c84069468528d6a1ccc3664040ed47dd93972fcf1431237 (from https://www.piwheels.org/simple/brighteyes-ism/) (requires-python:>=3.7) 2023-10-01T05:17:35,305 Skipping link: No binaries permitted for brighteyes-ism: https://www.piwheels.org/simple/brighteyes-ism/brighteyes_ism-1.2.1-py3-none-any.whl#sha256=17f1ded7a6f621a77d8032474da0271b9651ba2bf51211606d68c615414d8835 (from https://www.piwheels.org/simple/brighteyes-ism/) (requires-python:>=3.7) 2023-10-01T05:17:35,305 Skipping link: No binaries permitted for brighteyes-ism: https://www.piwheels.org/simple/brighteyes-ism/brighteyes_ism-1.2.0-py3-none-any.whl#sha256=6ce9ca60094f3a3952321dcc245fa89928c56a9d2827419c8a1f4b2142faac97 (from https://www.piwheels.org/simple/brighteyes-ism/) (requires-python:>=3.7) 2023-10-01T05:17:35,306 Skipping link: No binaries permitted for brighteyes-ism: https://www.piwheels.org/simple/brighteyes-ism/brighteyes_ism-1.1.2-py3-none-any.whl#sha256=24a5c1a81317c2422c9bf4ea00f0e50e4e0b104ab9b0fb0b511c5c8a37987bdb (from https://www.piwheels.org/simple/brighteyes-ism/) (requires-python:>=3.7) 2023-10-01T05:17:35,306 Skipping link: No binaries permitted for brighteyes-ism: https://www.piwheels.org/simple/brighteyes-ism/brighteyes_ism-1.1.1-py3-none-any.whl#sha256=59ed5abb139e8c62040f558510cc1530326596d5e68909dfa3f40d14679706ce (from https://www.piwheels.org/simple/brighteyes-ism/) (requires-python:>=3.7) 2023-10-01T05:17:35,307 Skipping link: No binaries permitted for brighteyes-ism: https://www.piwheels.org/simple/brighteyes-ism/brighteyes_ism-1.1.0-py3-none-any.whl#sha256=9fd26f07a23b867628d57d8720fb0a8a2ab5b3f77394c41ffb7ec06fff77ab21 (from https://www.piwheels.org/simple/brighteyes-ism/) (requires-python:>=3.7) 2023-10-01T05:17:35,308 Skipping link: No binaries permitted for brighteyes-ism: https://www.piwheels.org/simple/brighteyes-ism/brighteyes_ism-1.0.2-py3-none-any.whl#sha256=bb325784575b9b2fa8c02961337ad1cf4eff060fe41a1cdf106ff0e2cb88418c (from https://www.piwheels.org/simple/brighteyes-ism/) (requires-python:>=3.7) 2023-10-01T05:17:35,308 Skipping link: No binaries permitted for brighteyes-ism: https://www.piwheels.org/simple/brighteyes-ism/brighteyes_ism-1.0.0-py3-none-any.whl#sha256=a79783cd4409822d701c4ee2d5c7ed79063bbbbeaa134053b0d7eae95bbb160c (from https://www.piwheels.org/simple/brighteyes-ism/) (requires-python:>=3.8) 2023-10-01T05:17:35,309 Skipping link: not a file: https://www.piwheels.org/simple/brighteyes-ism/ 2023-10-01T05:17:35,309 Skipping link: not a file: https://pypi.org/simple/brighteyes-ism/ 2023-10-01T05:17:35,329 Given no hashes to check 1 links for project 'brighteyes-ism': discarding no candidates 2023-10-01T05:17:35,347 Collecting brighteyes-ism==1.2.4 2023-10-01T05:17:35,349 Created temporary directory: /tmp/pip-unpack-3odin73r 2023-10-01T05:17:35,558 Downloading brighteyes-ism-1.2.4.tar.gz (39 kB) 2023-10-01T05:17:35,655 Added brighteyes-ism==1.2.4 from https://files.pythonhosted.org/packages/08/34/3c17f2ca1e4fcfaf046a6ec52b213eafd3137fa63df382db1de86da21a68/brighteyes-ism-1.2.4.tar.gz to build tracker '/tmp/pip-build-tracker-3w9_e7rm' 2023-10-01T05:17:35,660 Created temporary directory: /tmp/pip-build-env-2h5r_0hg 2023-10-01T05:17:35,664 Installing build dependencies: started 2023-10-01T05:17:35,666 Running command pip subprocess to install build dependencies 2023-10-01T05:17:36,816 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-10-01T05:17:37,339 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-10-01T05:17:38,893 Collecting setuptools>=61.0 2023-10-01T05:17:38,976 Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.2.2-py3-none-any.whl (807 kB) 2023-10-01T05:17:41,566 Installing collected packages: setuptools 2023-10-01T05:17:43,784 Successfully installed setuptools-68.2.2 2023-10-01T05:17:44,341 Installing build dependencies: finished with status 'done' 2023-10-01T05:17:44,345 Getting requirements to build wheel: started 2023-10-01T05:17:44,346 Running command Getting requirements to build wheel 2023-10-01T05:17:44,914 /tmp/pip-build-env-2h5r_0hg/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:73: _WouldIgnoreField: `dependencies` defined outside of `pyproject.toml` would be ignored. 2023-10-01T05:17:44,914 !! 2023-10-01T05:17:44,915 ******************************************************************************** 2023-10-01T05:17:44,916 ########################################################################## 2023-10-01T05:17:44,916 # configuration would be ignored/result in error due to `pyproject.toml` # 2023-10-01T05:17:44,917 ########################################################################## 2023-10-01T05:17:44,918 The following seems to be defined outside of `pyproject.toml`: 2023-10-01T05:17:44,919 `dependencies = ['numpy', 'scipy', 'scikit-image', 'scikit-learn', 'matplotlib', 'joblib', 'poppy', 'PyCustomFocus==2.3', 'tqdm', 'h5py', 'statsmodels', 'matplotlib-scalebar']` 2023-10-01T05:17:44,920 According to the spec (see the link below), however, setuptools CANNOT 2023-10-01T05:17:44,921 consider this value unless `dependencies` is listed as `dynamic`. 2023-10-01T05:17:44,922 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2023-10-01T05:17:44,923 For the time being, `setuptools` will still consider the given value (as a 2023-10-01T05:17:44,924 **transitional** measure), but please note that future releases of setuptools will 2023-10-01T05:17:44,925 follow strictly the standard. 2023-10-01T05:17:44,926 To prevent this warning, you can list `dependencies` under `dynamic` or alternatively 2023-10-01T05:17:44,926 remove the `[project]` table from your file and rely entirely on other means of 2023-10-01T05:17:44,927 configuration. 2023-10-01T05:17:44,928 By 2023-Oct-30, you need to update your project and remove deprecated calls 2023-10-01T05:17:44,928 or your builds will no longer be supported. 2023-10-01T05:17:44,929 ******************************************************************************** 2023-10-01T05:17:44,930 !! 2023-10-01T05:17:44,931 _handle_missing_dynamic(dist, project_table) 2023-10-01T05:17:44,931 /tmp/pip-build-env-2h5r_0hg/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:73: _WouldIgnoreField: `optional-dependencies` defined outside of `pyproject.toml` would be ignored. 2023-10-01T05:17:44,932 !! 2023-10-01T05:17:44,933 ******************************************************************************** 2023-10-01T05:17:44,933 ########################################################################## 2023-10-01T05:17:44,934 # configuration would be ignored/result in error due to `pyproject.toml` # 2023-10-01T05:17:44,935 ########################################################################## 2023-10-01T05:17:44,936 The following seems to be defined outside of `pyproject.toml`: 2023-10-01T05:17:44,937 `optional-dependencies = {'testing': ['tox', 'pytest # https://docs.pytest.org/en/latest/contents.html', 'pytest-cov # https://pytest-cov.readthedocs.io/en/latest/', 'pytest-qt # https://pytest-qt.readthedocs.io/en/latest/', 'napari', 'pyqt5']}` 2023-10-01T05:17:44,938 According to the spec (see the link below), however, setuptools CANNOT 2023-10-01T05:17:44,938 consider this value unless `optional-dependencies` is listed as `dynamic`. 2023-10-01T05:17:44,939 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2023-10-01T05:17:44,940 For the time being, `setuptools` will still consider the given value (as a 2023-10-01T05:17:44,940 **transitional** measure), but please note that future releases of setuptools will 2023-10-01T05:17:44,941 follow strictly the standard. 2023-10-01T05:17:44,942 To prevent this warning, you can list `optional-dependencies` under `dynamic` or alternatively 2023-10-01T05:17:44,942 remove the `[project]` table from your file and rely entirely on other means of 2023-10-01T05:17:44,943 configuration. 2023-10-01T05:17:44,944 By 2023-Oct-30, you need to update your project and remove deprecated calls 2023-10-01T05:17:44,944 or your builds will no longer be supported. 2023-10-01T05:17:44,944 ******************************************************************************** 2023-10-01T05:17:44,945 !! 2023-10-01T05:17:44,946 _handle_missing_dynamic(dist, project_table) 2023-10-01T05:17:44,946 /tmp/pip-build-env-2h5r_0hg/overlay/local/lib/python3.11/dist-packages/setuptools/config/expand.py:134: SetuptoolsWarning: File '/tmp/pip-wheel-bat7nf9e/brighteyes-ism_a8db5e8beb8742d9898215d0cdbb8da5/LICENSE.txt' cannot be found 2023-10-01T05:17:44,947 return '\n'.join( 2023-10-01T05:17:45,162 running egg_info 2023-10-01T05:17:45,166 writing src/brighteyes_ism.egg-info/PKG-INFO 2023-10-01T05:17:45,171 writing dependency_links to src/brighteyes_ism.egg-info/dependency_links.txt 2023-10-01T05:17:45,174 writing requirements to src/brighteyes_ism.egg-info/requires.txt 2023-10-01T05:17:45,176 writing top-level names to src/brighteyes_ism.egg-info/top_level.txt 2023-10-01T05:17:45,191 reading manifest file 'src/brighteyes_ism.egg-info/SOURCES.txt' 2023-10-01T05:17:45,194 adding license file 'LICENSE' 2023-10-01T05:17:45,196 writing manifest file 'src/brighteyes_ism.egg-info/SOURCES.txt' 2023-10-01T05:17:45,308 Getting requirements to build wheel: finished with status 'done' 2023-10-01T05:17:45,316 Installing backend dependencies: started 2023-10-01T05:17:45,317 Running command pip subprocess to install backend dependencies 2023-10-01T05:17:46,452 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-10-01T05:17:46,981 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-10-01T05:17:47,497 Collecting wheel 2023-10-01T05:17:47,514 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB) 2023-10-01T05:17:49,736 Installing collected packages: wheel 2023-10-01T05:17:49,963 Creating /tmp/pip-build-env-2h5r_0hg/normal/local/bin 2023-10-01T05:17:49,965 changing mode of /tmp/pip-build-env-2h5r_0hg/normal/local/bin/wheel to 755 2023-10-01T05:17:49,976 Successfully installed wheel-0.41.2 2023-10-01T05:17:50,477 Installing backend dependencies: finished with status 'done' 2023-10-01T05:17:50,479 Created temporary directory: /tmp/pip-modern-metadata-3_xr63wt 2023-10-01T05:17:50,481 Preparing metadata (pyproject.toml): started 2023-10-01T05:17:50,483 Running command Preparing metadata (pyproject.toml) 2023-10-01T05:17:51,003 /tmp/pip-build-env-2h5r_0hg/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:73: _WouldIgnoreField: `dependencies` defined outside of `pyproject.toml` would be ignored. 2023-10-01T05:17:51,003 !! 2023-10-01T05:17:51,004 ******************************************************************************** 2023-10-01T05:17:51,005 ########################################################################## 2023-10-01T05:17:51,005 # configuration would be ignored/result in error due to `pyproject.toml` # 2023-10-01T05:17:51,006 ########################################################################## 2023-10-01T05:17:51,007 The following seems to be defined outside of `pyproject.toml`: 2023-10-01T05:17:51,008 `dependencies = ['numpy', 'scipy', 'scikit-image', 'scikit-learn', 'matplotlib', 'joblib', 'poppy', 'PyCustomFocus==2.3', 'tqdm', 'h5py', 'statsmodels', 'matplotlib-scalebar']` 2023-10-01T05:17:51,009 According to the spec (see the link below), however, setuptools CANNOT 2023-10-01T05:17:51,009 consider this value unless `dependencies` is listed as `dynamic`. 2023-10-01T05:17:51,010 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2023-10-01T05:17:51,011 For the time being, `setuptools` will still consider the given value (as a 2023-10-01T05:17:51,011 **transitional** measure), but please note that future releases of setuptools will 2023-10-01T05:17:51,012 follow strictly the standard. 2023-10-01T05:17:51,013 To prevent this warning, you can list `dependencies` under `dynamic` or alternatively 2023-10-01T05:17:51,013 remove the `[project]` table from your file and rely entirely on other means of 2023-10-01T05:17:51,014 configuration. 2023-10-01T05:17:51,015 By 2023-Oct-30, you need to update your project and remove deprecated calls 2023-10-01T05:17:51,015 or your builds will no longer be supported. 2023-10-01T05:17:51,016 ******************************************************************************** 2023-10-01T05:17:51,017 !! 2023-10-01T05:17:51,017 _handle_missing_dynamic(dist, project_table) 2023-10-01T05:17:51,018 /tmp/pip-build-env-2h5r_0hg/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:73: _WouldIgnoreField: `optional-dependencies` defined outside of `pyproject.toml` would be ignored. 2023-10-01T05:17:51,018 !! 2023-10-01T05:17:51,019 ******************************************************************************** 2023-10-01T05:17:51,020 ########################################################################## 2023-10-01T05:17:51,020 # configuration would be ignored/result in error due to `pyproject.toml` # 2023-10-01T05:17:51,021 ########################################################################## 2023-10-01T05:17:51,022 The following seems to be defined outside of `pyproject.toml`: 2023-10-01T05:17:51,023 `optional-dependencies = {'testing': ['tox', 'pytest # https://docs.pytest.org/en/latest/contents.html', 'pytest-cov # https://pytest-cov.readthedocs.io/en/latest/', 'pytest-qt # https://pytest-qt.readthedocs.io/en/latest/', 'napari', 'pyqt5']}` 2023-10-01T05:17:51,024 According to the spec (see the link below), however, setuptools CANNOT 2023-10-01T05:17:51,025 consider this value unless `optional-dependencies` is listed as `dynamic`. 2023-10-01T05:17:51,026 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2023-10-01T05:17:51,027 For the time being, `setuptools` will still consider the given value (as a 2023-10-01T05:17:51,028 **transitional** measure), but please note that future releases of setuptools will 2023-10-01T05:17:51,028 follow strictly the standard. 2023-10-01T05:17:51,029 To prevent this warning, you can list `optional-dependencies` under `dynamic` or alternatively 2023-10-01T05:17:51,030 remove the `[project]` table from your file and rely entirely on other means of 2023-10-01T05:17:51,030 configuration. 2023-10-01T05:17:51,032 By 2023-Oct-30, you need to update your project and remove deprecated calls 2023-10-01T05:17:51,032 or your builds will no longer be supported. 2023-10-01T05:17:51,032 ******************************************************************************** 2023-10-01T05:17:51,033 !! 2023-10-01T05:17:51,034 _handle_missing_dynamic(dist, project_table) 2023-10-01T05:17:51,034 /tmp/pip-build-env-2h5r_0hg/overlay/local/lib/python3.11/dist-packages/setuptools/config/expand.py:134: SetuptoolsWarning: File '/tmp/pip-wheel-bat7nf9e/brighteyes-ism_a8db5e8beb8742d9898215d0cdbb8da5/LICENSE.txt' cannot be found 2023-10-01T05:17:51,035 return '\n'.join( 2023-10-01T05:17:51,304 running dist_info 2023-10-01T05:17:51,309 creating /tmp/pip-modern-metadata-3_xr63wt/brighteyes_ism.egg-info 2023-10-01T05:17:51,312 writing /tmp/pip-modern-metadata-3_xr63wt/brighteyes_ism.egg-info/PKG-INFO 2023-10-01T05:17:51,318 writing dependency_links to /tmp/pip-modern-metadata-3_xr63wt/brighteyes_ism.egg-info/dependency_links.txt 2023-10-01T05:17:51,321 writing requirements to /tmp/pip-modern-metadata-3_xr63wt/brighteyes_ism.egg-info/requires.txt 2023-10-01T05:17:51,322 writing top-level names to /tmp/pip-modern-metadata-3_xr63wt/brighteyes_ism.egg-info/top_level.txt 2023-10-01T05:17:51,323 writing manifest file '/tmp/pip-modern-metadata-3_xr63wt/brighteyes_ism.egg-info/SOURCES.txt' 2023-10-01T05:17:51,340 reading manifest file '/tmp/pip-modern-metadata-3_xr63wt/brighteyes_ism.egg-info/SOURCES.txt' 2023-10-01T05:17:51,342 adding license file 'LICENSE' 2023-10-01T05:17:51,345 writing manifest file '/tmp/pip-modern-metadata-3_xr63wt/brighteyes_ism.egg-info/SOURCES.txt' 2023-10-01T05:17:51,346 creating '/tmp/pip-modern-metadata-3_xr63wt/brighteyes_ism-1.2.4.dist-info' 2023-10-01T05:17:51,500 Preparing metadata (pyproject.toml): finished with status 'done' 2023-10-01T05:17:51,504 Source in /tmp/pip-wheel-bat7nf9e/brighteyes-ism_a8db5e8beb8742d9898215d0cdbb8da5 has version 1.2.4, which satisfies requirement brighteyes-ism==1.2.4 from https://files.pythonhosted.org/packages/08/34/3c17f2ca1e4fcfaf046a6ec52b213eafd3137fa63df382db1de86da21a68/brighteyes-ism-1.2.4.tar.gz 2023-10-01T05:17:51,505 Removed brighteyes-ism==1.2.4 from https://files.pythonhosted.org/packages/08/34/3c17f2ca1e4fcfaf046a6ec52b213eafd3137fa63df382db1de86da21a68/brighteyes-ism-1.2.4.tar.gz from build tracker '/tmp/pip-build-tracker-3w9_e7rm' 2023-10-01T05:17:51,511 Created temporary directory: /tmp/pip-unpack-qcb07cat 2023-10-01T05:17:51,512 Created temporary directory: /tmp/pip-unpack-t5gkju7d 2023-10-01T05:17:51,543 Building wheels for collected packages: brighteyes-ism 2023-10-01T05:17:51,547 Created temporary directory: /tmp/pip-wheel-wypgtmhw 2023-10-01T05:17:51,547 Destination directory: /tmp/pip-wheel-wypgtmhw 2023-10-01T05:17:51,549 Building wheel for brighteyes-ism (pyproject.toml): started 2023-10-01T05:17:51,550 Running command Building wheel for brighteyes-ism (pyproject.toml) 2023-10-01T05:17:52,072 /tmp/pip-build-env-2h5r_0hg/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:73: _WouldIgnoreField: `dependencies` defined outside of `pyproject.toml` would be ignored. 2023-10-01T05:17:52,073 !! 2023-10-01T05:17:52,074 ******************************************************************************** 2023-10-01T05:17:52,075 ########################################################################## 2023-10-01T05:17:52,075 # configuration would be ignored/result in error due to `pyproject.toml` # 2023-10-01T05:17:52,076 ########################################################################## 2023-10-01T05:17:52,077 The following seems to be defined outside of `pyproject.toml`: 2023-10-01T05:17:52,078 `dependencies = ['numpy', 'scipy', 'scikit-image', 'scikit-learn', 'matplotlib', 'joblib', 'poppy', 'PyCustomFocus==2.3', 'tqdm', 'h5py', 'statsmodels', 'matplotlib-scalebar']` 2023-10-01T05:17:52,080 According to the spec (see the link below), however, setuptools CANNOT 2023-10-01T05:17:52,080 consider this value unless `dependencies` is listed as `dynamic`. 2023-10-01T05:17:52,081 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2023-10-01T05:17:52,082 For the time being, `setuptools` will still consider the given value (as a 2023-10-01T05:17:52,082 **transitional** measure), but please note that future releases of setuptools will 2023-10-01T05:17:52,083 follow strictly the standard. 2023-10-01T05:17:52,084 To prevent this warning, you can list `dependencies` under `dynamic` or alternatively 2023-10-01T05:17:52,084 remove the `[project]` table from your file and rely entirely on other means of 2023-10-01T05:17:52,085 configuration. 2023-10-01T05:17:52,085 By 2023-Oct-30, you need to update your project and remove deprecated calls 2023-10-01T05:17:52,086 or your builds will no longer be supported. 2023-10-01T05:17:52,086 ******************************************************************************** 2023-10-01T05:17:52,087 !! 2023-10-01T05:17:52,088 _handle_missing_dynamic(dist, project_table) 2023-10-01T05:17:52,088 /tmp/pip-build-env-2h5r_0hg/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:73: _WouldIgnoreField: `optional-dependencies` defined outside of `pyproject.toml` would be ignored. 2023-10-01T05:17:52,088 !! 2023-10-01T05:17:52,089 ******************************************************************************** 2023-10-01T05:17:52,090 ########################################################################## 2023-10-01T05:17:52,091 # configuration would be ignored/result in error due to `pyproject.toml` # 2023-10-01T05:17:52,091 ########################################################################## 2023-10-01T05:17:52,092 The following seems to be defined outside of `pyproject.toml`: 2023-10-01T05:17:52,094 `optional-dependencies = {'testing': ['tox', 'pytest # https://docs.pytest.org/en/latest/contents.html', 'pytest-cov # https://pytest-cov.readthedocs.io/en/latest/', 'pytest-qt # https://pytest-qt.readthedocs.io/en/latest/', 'napari', 'pyqt5']}` 2023-10-01T05:17:52,095 According to the spec (see the link below), however, setuptools CANNOT 2023-10-01T05:17:52,095 consider this value unless `optional-dependencies` is listed as `dynamic`. 2023-10-01T05:17:52,097 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2023-10-01T05:17:52,098 For the time being, `setuptools` will still consider the given value (as a 2023-10-01T05:17:52,098 **transitional** measure), but please note that future releases of setuptools will 2023-10-01T05:17:52,099 follow strictly the standard. 2023-10-01T05:17:52,100 To prevent this warning, you can list `optional-dependencies` under `dynamic` or alternatively 2023-10-01T05:17:52,101 remove the `[project]` table from your file and rely entirely on other means of 2023-10-01T05:17:52,101 configuration. 2023-10-01T05:17:52,102 By 2023-Oct-30, you need to update your project and remove deprecated calls 2023-10-01T05:17:52,103 or your builds will no longer be supported. 2023-10-01T05:17:52,103 ******************************************************************************** 2023-10-01T05:17:52,104 !! 2023-10-01T05:17:52,105 _handle_missing_dynamic(dist, project_table) 2023-10-01T05:17:52,106 /tmp/pip-build-env-2h5r_0hg/overlay/local/lib/python3.11/dist-packages/setuptools/config/expand.py:134: SetuptoolsWarning: File '/tmp/pip-wheel-bat7nf9e/brighteyes-ism_a8db5e8beb8742d9898215d0cdbb8da5/LICENSE.txt' cannot be found 2023-10-01T05:17:52,106 return '\n'.join( 2023-10-01T05:17:52,347 running bdist_wheel 2023-10-01T05:17:52,362 running build 2023-10-01T05:17:52,363 running build_py 2023-10-01T05:17:52,367 creating build 2023-10-01T05:17:52,367 creating build/lib 2023-10-01T05:17:52,368 creating build/lib/brighteyes_ism 2023-10-01T05:17:52,369 copying src/brighteyes_ism/__init__.py -> build/lib/brighteyes_ism 2023-10-01T05:17:52,371 creating build/lib/brighteyes_ism/simulation 2023-10-01T05:17:52,372 copying src/brighteyes_ism/simulation/__init__.py -> build/lib/brighteyes_ism/simulation 2023-10-01T05:17:52,373 copying src/brighteyes_ism/simulation/Tubulin_sim.py -> build/lib/brighteyes_ism/simulation 2023-10-01T05:17:52,375 copying src/brighteyes_ism/simulation/PSF_sim.py -> build/lib/brighteyes_ism/simulation 2023-10-01T05:17:52,378 creating build/lib/brighteyes_ism/dataio 2023-10-01T05:17:52,379 copying src/brighteyes_ism/dataio/__init__.py -> build/lib/brighteyes_ism/dataio 2023-10-01T05:17:52,380 copying src/brighteyes_ism/dataio/mcs.py -> build/lib/brighteyes_ism/dataio 2023-10-01T05:17:52,383 creating build/lib/brighteyes_ism/analysis 2023-10-01T05:17:52,384 copying src/brighteyes_ism/analysis/Graph_lib.py -> build/lib/brighteyes_ism/analysis 2023-10-01T05:17:52,386 copying src/brighteyes_ism/analysis/__init__.py -> build/lib/brighteyes_ism/analysis 2023-10-01T05:17:52,387 copying src/brighteyes_ism/analysis/Deconv_lib.py -> build/lib/brighteyes_ism/analysis 2023-10-01T05:17:52,389 copying src/brighteyes_ism/analysis/FRC_lib.py -> build/lib/brighteyes_ism/analysis 2023-10-01T05:17:52,391 copying src/brighteyes_ism/analysis/APR_lib.py -> build/lib/brighteyes_ism/analysis 2023-10-01T05:17:52,393 copying src/brighteyes_ism/analysis/Tools_lib.py -> build/lib/brighteyes_ism/analysis 2023-10-01T05:17:52,396 copying src/brighteyes_ism/analysis/FocusISM_lib.py -> build/lib/brighteyes_ism/analysis 2023-10-01T05:17:52,397 running egg_info 2023-10-01T05:17:52,401 writing src/brighteyes_ism.egg-info/PKG-INFO 2023-10-01T05:17:52,406 writing dependency_links to src/brighteyes_ism.egg-info/dependency_links.txt 2023-10-01T05:17:52,408 writing requirements to src/brighteyes_ism.egg-info/requires.txt 2023-10-01T05:17:52,409 writing top-level names to src/brighteyes_ism.egg-info/top_level.txt 2023-10-01T05:17:52,418 reading manifest file 'src/brighteyes_ism.egg-info/SOURCES.txt' 2023-10-01T05:17:52,419 adding license file 'LICENSE' 2023-10-01T05:17:52,422 writing manifest file 'src/brighteyes_ism.egg-info/SOURCES.txt' 2023-10-01T05:17:52,432 installing to build/bdist.linux-armv7l/wheel 2023-10-01T05:17:52,432 running install 2023-10-01T05:17:52,456 running install_lib 2023-10-01T05:17:52,461 creating build/bdist.linux-armv7l 2023-10-01T05:17:52,461 creating build/bdist.linux-armv7l/wheel 2023-10-01T05:17:52,463 creating build/bdist.linux-armv7l/wheel/brighteyes_ism 2023-10-01T05:17:52,464 copying build/lib/brighteyes_ism/__init__.py -> build/bdist.linux-armv7l/wheel/brighteyes_ism 2023-10-01T05:17:52,466 creating build/bdist.linux-armv7l/wheel/brighteyes_ism/simulation 2023-10-01T05:17:52,467 copying build/lib/brighteyes_ism/simulation/__init__.py -> build/bdist.linux-armv7l/wheel/brighteyes_ism/simulation 2023-10-01T05:17:52,468 copying build/lib/brighteyes_ism/simulation/Tubulin_sim.py -> build/bdist.linux-armv7l/wheel/brighteyes_ism/simulation 2023-10-01T05:17:52,471 copying build/lib/brighteyes_ism/simulation/PSF_sim.py -> build/bdist.linux-armv7l/wheel/brighteyes_ism/simulation 2023-10-01T05:17:52,473 creating build/bdist.linux-armv7l/wheel/brighteyes_ism/dataio 2023-10-01T05:17:52,474 copying build/lib/brighteyes_ism/dataio/__init__.py -> build/bdist.linux-armv7l/wheel/brighteyes_ism/dataio 2023-10-01T05:17:52,476 copying build/lib/brighteyes_ism/dataio/mcs.py -> build/bdist.linux-armv7l/wheel/brighteyes_ism/dataio 2023-10-01T05:17:52,479 creating build/bdist.linux-armv7l/wheel/brighteyes_ism/analysis 2023-10-01T05:17:52,480 copying build/lib/brighteyes_ism/analysis/Graph_lib.py -> build/bdist.linux-armv7l/wheel/brighteyes_ism/analysis 2023-10-01T05:17:52,482 copying build/lib/brighteyes_ism/analysis/__init__.py -> build/bdist.linux-armv7l/wheel/brighteyes_ism/analysis 2023-10-01T05:17:52,483 copying build/lib/brighteyes_ism/analysis/Deconv_lib.py -> build/bdist.linux-armv7l/wheel/brighteyes_ism/analysis 2023-10-01T05:17:52,485 copying build/lib/brighteyes_ism/analysis/FRC_lib.py -> build/bdist.linux-armv7l/wheel/brighteyes_ism/analysis 2023-10-01T05:17:52,488 copying build/lib/brighteyes_ism/analysis/APR_lib.py -> build/bdist.linux-armv7l/wheel/brighteyes_ism/analysis 2023-10-01T05:17:52,490 copying build/lib/brighteyes_ism/analysis/Tools_lib.py -> build/bdist.linux-armv7l/wheel/brighteyes_ism/analysis 2023-10-01T05:17:52,492 copying build/lib/brighteyes_ism/analysis/FocusISM_lib.py -> build/bdist.linux-armv7l/wheel/brighteyes_ism/analysis 2023-10-01T05:17:52,493 running install_egg_info 2023-10-01T05:17:52,497 Copying src/brighteyes_ism.egg-info to build/bdist.linux-armv7l/wheel/brighteyes_ism-1.2.4-py3.11.egg-info 2023-10-01T05:17:52,506 running install_scripts 2023-10-01T05:17:52,522 creating build/bdist.linux-armv7l/wheel/brighteyes_ism-1.2.4.dist-info/WHEEL 2023-10-01T05:17:52,525 creating '/tmp/pip-wheel-wypgtmhw/.tmp-mz5kzs6p/brighteyes_ism-1.2.4-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-10-01T05:17:52,527 adding 'brighteyes_ism/__init__.py' 2023-10-01T05:17:52,529 adding 'brighteyes_ism/analysis/APR_lib.py' 2023-10-01T05:17:52,531 adding 'brighteyes_ism/analysis/Deconv_lib.py' 2023-10-01T05:17:52,533 adding 'brighteyes_ism/analysis/FRC_lib.py' 2023-10-01T05:17:52,535 adding 'brighteyes_ism/analysis/FocusISM_lib.py' 2023-10-01T05:17:52,537 adding 'brighteyes_ism/analysis/Graph_lib.py' 2023-10-01T05:17:52,539 adding 'brighteyes_ism/analysis/Tools_lib.py' 2023-10-01T05:17:52,541 adding 'brighteyes_ism/analysis/__init__.py' 2023-10-01T05:17:52,542 adding 'brighteyes_ism/dataio/__init__.py' 2023-10-01T05:17:52,544 adding 'brighteyes_ism/dataio/mcs.py' 2023-10-01T05:17:52,547 adding 'brighteyes_ism/simulation/PSF_sim.py' 2023-10-01T05:17:52,549 adding 'brighteyes_ism/simulation/Tubulin_sim.py' 2023-10-01T05:17:52,550 adding 'brighteyes_ism/simulation/__init__.py' 2023-10-01T05:17:52,557 adding 'brighteyes_ism-1.2.4.dist-info/LICENSE' 2023-10-01T05:17:52,558 adding 'brighteyes_ism-1.2.4.dist-info/METADATA' 2023-10-01T05:17:52,559 adding 'brighteyes_ism-1.2.4.dist-info/WHEEL' 2023-10-01T05:17:52,560 adding 'brighteyes_ism-1.2.4.dist-info/top_level.txt' 2023-10-01T05:17:52,561 adding 'brighteyes_ism-1.2.4.dist-info/RECORD' 2023-10-01T05:17:52,563 removing build/bdist.linux-armv7l/wheel 2023-10-01T05:17:52,687 Building wheel for brighteyes-ism (pyproject.toml): finished with status 'done' 2023-10-01T05:17:52,692 Created wheel for brighteyes-ism: filename=brighteyes_ism-1.2.4-py3-none-any.whl size=41763 sha256=d893f26ffd83d0e63028574298c432a3004893b83e6f94fbd4a26840f8087249 2023-10-01T05:17:52,694 Stored in directory: /tmp/pip-ephem-wheel-cache-waynv4tk/wheels/91/23/4f/9d02d1ab7921904929831283c595302b6745756d9d9b69e8c8 2023-10-01T05:17:52,705 Successfully built brighteyes-ism 2023-10-01T05:17:52,709 Removed build tracker: '/tmp/pip-build-tracker-3w9_e7rm'