2023-10-01T13:14:37,847 Created temporary directory: /tmp/pip-build-tracker-y5e6j4du 2023-10-01T13:14:37,848 Initialized build tracking at /tmp/pip-build-tracker-y5e6j4du 2023-10-01T13:14:37,849 Created build tracker: /tmp/pip-build-tracker-y5e6j4du 2023-10-01T13:14:37,849 Entered build tracker: /tmp/pip-build-tracker-y5e6j4du 2023-10-01T13:14:37,850 Created temporary directory: /tmp/pip-wheel-ddozz296 2023-10-01T13:14:37,853 Created temporary directory: /tmp/pip-ephem-wheel-cache-5ueu8v8q 2023-10-01T13:14:37,877 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-10-01T13:14:37,881 2 location(s) to search for versions of spci: 2023-10-01T13:14:37,881 * https://pypi.org/simple/spci/ 2023-10-01T13:14:37,881 * https://www.piwheels.org/simple/spci/ 2023-10-01T13:14:37,882 Fetching project page and analyzing links: https://pypi.org/simple/spci/ 2023-10-01T13:14:37,882 Getting page https://pypi.org/simple/spci/ 2023-10-01T13:14:37,884 Found index url https://pypi.org/simple/ 2023-10-01T13:14:38,098 Fetched page https://pypi.org/simple/spci/ as application/vnd.pypi.simple.v1+json 2023-10-01T13:14:38,101 Skipping link: No binaries permitted for spci: https://files.pythonhosted.org/packages/1a/41/32d0d8358817d6906af703026287c106096f9338e724c6b325290f0bbc69/spci-1.1.0-py3-none-any.whl (from https://pypi.org/simple/spci/) (requires-python:>=3.6) 2023-10-01T13:14:38,102 Found link https://files.pythonhosted.org/packages/91/fc/96c4104ed9b23aabbba514fd7434a7c29a0fdd3740f30cb3d8022a5d30b5/spci-1.1.0.tar.gz (from https://pypi.org/simple/spci/) (requires-python:>=3.6), version: 1.1.0 2023-10-01T13:14:38,103 Skipping link: No binaries permitted for spci: https://files.pythonhosted.org/packages/b5/03/d2ffe5eb4420ab13ee16c39f0fefa4ec01b872b837dad736d7efe66c514c/spci-1.1.1-py3-none-any.whl (from https://pypi.org/simple/spci/) (requires-python:>=3.6) 2023-10-01T13:14:38,104 Found link https://files.pythonhosted.org/packages/6e/c5/704cfbf85c8e2870d81431b9c25500e495f9bedcf9565126df3f3a52e870/spci-1.1.1.tar.gz (from https://pypi.org/simple/spci/) (requires-python:>=3.6), version: 1.1.1 2023-10-01T13:14:38,104 Skipping link: No binaries permitted for spci: https://files.pythonhosted.org/packages/12/b0/4931707302555d699a4120861090ff7693b48d00b9071c20790c59395576/spci-1.1.2-py3-none-any.whl (from https://pypi.org/simple/spci/) (requires-python:>=3.6) 2023-10-01T13:14:38,105 Found link https://files.pythonhosted.org/packages/bd/c3/3a234feb5025948f920a75ed9011b549423dfd546f92a3dc77951b590a6d/spci-1.1.2.tar.gz (from https://pypi.org/simple/spci/) (requires-python:>=3.6), version: 1.1.2 2023-10-01T13:14:38,106 Skipping link: No binaries permitted for spci: https://files.pythonhosted.org/packages/f6/65/78d76c8e0297104559312c4880b2bbc461305708f722db1c392e75d0a0d5/spci-1.1.3-py3-none-any.whl (from https://pypi.org/simple/spci/) (requires-python:>=3.6) 2023-10-01T13:14:38,107 Found link https://files.pythonhosted.org/packages/81/17/166f99ea4a929645df3b422dfd80ab7acb407e5176ef1925ed06c7a48cdd/spci-1.1.3.tar.gz (from https://pypi.org/simple/spci/) (requires-python:>=3.6), version: 1.1.3 2023-10-01T13:14:38,108 Fetching project page and analyzing links: https://www.piwheels.org/simple/spci/ 2023-10-01T13:14:38,108 Getting page https://www.piwheels.org/simple/spci/ 2023-10-01T13:14:38,110 Found index url https://www.piwheels.org/simple/ 2023-10-01T13:14:38,277 Fetched page https://www.piwheels.org/simple/spci/ as text/html 2023-10-01T13:14:38,279 Skipping link: No binaries permitted for spci: https://www.piwheels.org/simple/spci/spci-1.1.2-py3-none-any.whl#sha256=12b5b9199bd5b761c46a92342a7edcf0c6f69355690166f42a3e4aa5bf0761f7 (from https://www.piwheels.org/simple/spci/) (requires-python:>=3.6) 2023-10-01T13:14:38,279 Skipping link: No binaries permitted for spci: https://www.piwheels.org/simple/spci/spci-1.1.1-py3-none-any.whl#sha256=1f5a2d433db3cc13ca66b73815a700db7fe871afcf9107932168dbf8411863c3 (from https://www.piwheels.org/simple/spci/) (requires-python:>=3.6) 2023-10-01T13:14:38,280 Skipping link: No binaries permitted for spci: https://www.piwheels.org/simple/spci/spci-1.1.0-py3-none-any.whl#sha256=657d7b6b114bcf163a18de5d335dce76e68b209c3086afd15180fbc604b77966 (from https://www.piwheels.org/simple/spci/) (requires-python:>=3.6) 2023-10-01T13:14:38,281 Skipping link: not a file: https://www.piwheels.org/simple/spci/ 2023-10-01T13:14:38,281 Skipping link: not a file: https://pypi.org/simple/spci/ 2023-10-01T13:14:38,301 Given no hashes to check 1 links for project 'spci': discarding no candidates 2023-10-01T13:14:38,322 Collecting spci==1.1.3 2023-10-01T13:14:38,324 Created temporary directory: /tmp/pip-unpack-7qm578l8 2023-10-01T13:14:38,545 Downloading spci-1.1.3.tar.gz (44 kB) 2023-10-01T13:14:38,655 Added spci==1.1.3 from https://files.pythonhosted.org/packages/81/17/166f99ea4a929645df3b422dfd80ab7acb407e5176ef1925ed06c7a48cdd/spci-1.1.3.tar.gz to build tracker '/tmp/pip-build-tracker-y5e6j4du' 2023-10-01T13:14:38,657 Running setup.py (path:/tmp/pip-wheel-ddozz296/spci_66202702a1ba4e15a24a7cb978c4e748/setup.py) egg_info for package spci 2023-10-01T13:14:38,658 Created temporary directory: /tmp/pip-pip-egg-info-w9ednujo 2023-10-01T13:14:38,658 Preparing metadata (setup.py): started 2023-10-01T13:14:38,659 Running command python setup.py egg_info 2023-10-01T13:14:39,113 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-10-01T13:14:39,114 !! 2023-10-01T13:14:39,115 ******************************************************************************** 2023-10-01T13:14:39,115 Usage of dash-separated 'description-file' will not be supported in future 2023-10-01T13:14:39,116 versions. Please use the underscore name 'description_file' instead. 2023-10-01T13:14:39,117 This deprecation is overdue, please update your project and remove deprecated 2023-10-01T13:14:39,117 calls to avoid build errors in the future. 2023-10-01T13:14:39,118 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-10-01T13:14:39,119 ******************************************************************************** 2023-10-01T13:14:39,120 !! 2023-10-01T13:14:39,120 opt = self.warn_dash_deprecation(opt, section) 2023-10-01T13:14:39,678 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-10-01T13:14:39,678 !! 2023-10-01T13:14:39,679 ******************************************************************************** 2023-10-01T13:14:39,680 Usage of dash-separated 'description-file' will not be supported in future 2023-10-01T13:14:39,681 versions. Please use the underscore name 'description_file' instead. 2023-10-01T13:14:39,682 This deprecation is overdue, please update your project and remove deprecated 2023-10-01T13:14:39,682 calls to avoid build errors in the future. 2023-10-01T13:14:39,683 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-10-01T13:14:39,684 ******************************************************************************** 2023-10-01T13:14:39,685 !! 2023-10-01T13:14:39,686 opt = self.warn_dash_deprecation(opt, section) 2023-10-01T13:14:39,718 running egg_info 2023-10-01T13:14:39,720 creating /tmp/pip-pip-egg-info-w9ednujo/spci.egg-info 2023-10-01T13:14:39,746 writing /tmp/pip-pip-egg-info-w9ednujo/spci.egg-info/PKG-INFO 2023-10-01T13:14:39,750 writing dependency_links to /tmp/pip-pip-egg-info-w9ednujo/spci.egg-info/dependency_links.txt 2023-10-01T13:14:39,752 writing entry points to /tmp/pip-pip-egg-info-w9ednujo/spci.egg-info/entry_points.txt 2023-10-01T13:14:39,754 writing requirements to /tmp/pip-pip-egg-info-w9ednujo/spci.egg-info/requires.txt 2023-10-01T13:14:39,755 writing top-level names to /tmp/pip-pip-egg-info-w9ednujo/spci.egg-info/top_level.txt 2023-10-01T13:14:39,756 writing manifest file '/tmp/pip-pip-egg-info-w9ednujo/spci.egg-info/SOURCES.txt' 2023-10-01T13:14:39,838 reading manifest file '/tmp/pip-pip-egg-info-w9ednujo/spci.egg-info/SOURCES.txt' 2023-10-01T13:14:39,840 reading manifest template 'MANIFEST.in' 2023-10-01T13:14:39,843 writing manifest file '/tmp/pip-pip-egg-info-w9ednujo/spci.egg-info/SOURCES.txt' 2023-10-01T13:14:39,955 Preparing metadata (setup.py): finished with status 'done' 2023-10-01T13:14:39,958 Source in /tmp/pip-wheel-ddozz296/spci_66202702a1ba4e15a24a7cb978c4e748 has version 1.1.3, which satisfies requirement spci==1.1.3 from https://files.pythonhosted.org/packages/81/17/166f99ea4a929645df3b422dfd80ab7acb407e5176ef1925ed06c7a48cdd/spci-1.1.3.tar.gz 2023-10-01T13:14:39,959 Removed spci==1.1.3 from https://files.pythonhosted.org/packages/81/17/166f99ea4a929645df3b422dfd80ab7acb407e5176ef1925ed06c7a48cdd/spci-1.1.3.tar.gz from build tracker '/tmp/pip-build-tracker-y5e6j4du' 2023-10-01T13:14:39,965 Created temporary directory: /tmp/pip-unpack-5bddupdw 2023-10-01T13:14:39,966 Created temporary directory: /tmp/pip-unpack-bmxwv1v3 2023-10-01T13:14:39,974 Building wheels for collected packages: spci 2023-10-01T13:14:39,978 Created temporary directory: /tmp/pip-wheel-69twvnyl 2023-10-01T13:14:39,979 Building wheel for spci (setup.py): started 2023-10-01T13:14:39,980 Destination directory: /tmp/pip-wheel-69twvnyl 2023-10-01T13:14:39,981 Running command python setup.py bdist_wheel 2023-10-01T13:14:40,425 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-10-01T13:14:40,426 !! 2023-10-01T13:14:40,427 ******************************************************************************** 2023-10-01T13:14:40,427 Usage of dash-separated 'description-file' will not be supported in future 2023-10-01T13:14:40,427 versions. Please use the underscore name 'description_file' instead. 2023-10-01T13:14:40,429 This deprecation is overdue, please update your project and remove deprecated 2023-10-01T13:14:40,429 calls to avoid build errors in the future. 2023-10-01T13:14:40,430 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-10-01T13:14:40,431 ******************************************************************************** 2023-10-01T13:14:40,432 !! 2023-10-01T13:14:40,433 opt = self.warn_dash_deprecation(opt, section) 2023-10-01T13:14:40,985 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-10-01T13:14:40,985 !! 2023-10-01T13:14:40,986 ******************************************************************************** 2023-10-01T13:14:40,987 Usage of dash-separated 'description-file' will not be supported in future 2023-10-01T13:14:40,988 versions. Please use the underscore name 'description_file' instead. 2023-10-01T13:14:40,989 This deprecation is overdue, please update your project and remove deprecated 2023-10-01T13:14:40,989 calls to avoid build errors in the future. 2023-10-01T13:14:40,991 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-10-01T13:14:40,991 ******************************************************************************** 2023-10-01T13:14:40,992 !! 2023-10-01T13:14:40,993 opt = self.warn_dash_deprecation(opt, section) 2023-10-01T13:14:41,018 running bdist_wheel 2023-10-01T13:14:41,151 running build 2023-10-01T13:14:41,152 running build_py 2023-10-01T13:14:41,181 creating build 2023-10-01T13:14:41,182 creating build/lib 2023-10-01T13:14:41,183 creating build/lib/spci 2023-10-01T13:14:41,184 copying spci/plot_contributions.py -> build/lib/spci 2023-10-01T13:14:41,186 copying spci/spci.py -> build/lib/spci 2023-10-01T13:14:41,189 copying spci/calc_frag_contrib.py -> build/lib/spci 2023-10-01T13:14:41,192 copying spci/sirms_file_class.py -> build/lib/spci 2023-10-01T13:14:41,194 copying spci/mol_context.py -> build/lib/spci 2023-10-01T13:14:41,197 copying spci/find_frags_auto_rdkit.py -> build/lib/spci 2023-10-01T13:14:41,199 copying spci/__init__.py -> build/lib/spci 2023-10-01T13:14:41,200 copying spci/sdf_field2title.py -> build/lib/spci 2023-10-01T13:14:41,202 copying spci/plot_property_distribution.py -> build/lib/spci 2023-10-01T13:14:41,204 copying spci/descriptors.py -> build/lib/spci 2023-10-01T13:14:41,206 copying spci/extractsdf.py -> build/lib/spci 2023-10-01T13:14:41,208 copying spci/find_frags_rdkit.py -> build/lib/spci 2023-10-01T13:14:41,210 copying spci/filter_descriptors.py -> build/lib/spci 2023-10-01T13:14:41,212 copying spci/predict.py -> build/lib/spci 2023-10-01T13:14:41,214 copying spci/model.py -> build/lib/spci 2023-10-01T13:14:41,216 copying spci/calc_atomic_properties_chemaxon.py -> build/lib/spci 2023-10-01T13:14:41,218 copying spci/find_murcko_rdkit.py -> build/lib/spci 2023-10-01T13:14:41,219 running egg_info 2023-10-01T13:14:41,249 writing spci.egg-info/PKG-INFO 2023-10-01T13:14:41,253 writing dependency_links to spci.egg-info/dependency_links.txt 2023-10-01T13:14:41,255 writing entry points to spci.egg-info/entry_points.txt 2023-10-01T13:14:41,256 writing requirements to spci.egg-info/requires.txt 2023-10-01T13:14:41,258 writing top-level names to spci.egg-info/top_level.txt 2023-10-01T13:14:41,287 reading manifest file 'spci.egg-info/SOURCES.txt' 2023-10-01T13:14:41,289 reading manifest template 'MANIFEST.in' 2023-10-01T13:14:41,292 writing manifest file 'spci.egg-info/SOURCES.txt' 2023-10-01T13:14:41,294 copying spci/default.smarts -> build/lib/spci 2023-10-01T13:14:41,297 copying spci/setup.txt -> build/lib/spci 2023-10-01T13:14:41,299 copying spci/std_rules.xml -> build/lib/spci 2023-10-01T13:14:41,327 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-10-01T13:14:41,328 !! 2023-10-01T13:14:41,329 ******************************************************************************** 2023-10-01T13:14:41,329 Please avoid running ``setup.py`` directly. 2023-10-01T13:14:41,330 Instead, use pypa/build, pypa/installer or other 2023-10-01T13:14:41,330 standards-based tools. 2023-10-01T13:14:41,331 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-10-01T13:14:41,332 ******************************************************************************** 2023-10-01T13:14:41,333 !! 2023-10-01T13:14:41,334 self.initialize_options() 2023-10-01T13:14:41,354 installing to build/bdist.linux-armv7l/wheel 2023-10-01T13:14:41,355 running install 2023-10-01T13:14:41,378 running install_lib 2023-10-01T13:14:41,404 creating build/bdist.linux-armv7l 2023-10-01T13:14:41,405 creating build/bdist.linux-armv7l/wheel 2023-10-01T13:14:41,406 creating build/bdist.linux-armv7l/wheel/spci 2023-10-01T13:14:41,407 copying build/lib/spci/plot_contributions.py -> build/bdist.linux-armv7l/wheel/spci 2023-10-01T13:14:41,410 copying build/lib/spci/spci.py -> build/bdist.linux-armv7l/wheel/spci 2023-10-01T13:14:41,413 copying build/lib/spci/default.smarts -> build/bdist.linux-armv7l/wheel/spci 2023-10-01T13:14:41,416 copying build/lib/spci/calc_frag_contrib.py -> build/bdist.linux-armv7l/wheel/spci 2023-10-01T13:14:41,418 copying build/lib/spci/sirms_file_class.py -> build/bdist.linux-armv7l/wheel/spci 2023-10-01T13:14:41,421 copying build/lib/spci/mol_context.py -> build/bdist.linux-armv7l/wheel/spci 2023-10-01T13:14:41,423 copying build/lib/spci/find_frags_auto_rdkit.py -> build/bdist.linux-armv7l/wheel/spci 2023-10-01T13:14:41,426 copying build/lib/spci/__init__.py -> build/bdist.linux-armv7l/wheel/spci 2023-10-01T13:14:41,427 copying build/lib/spci/sdf_field2title.py -> build/bdist.linux-armv7l/wheel/spci 2023-10-01T13:14:41,430 copying build/lib/spci/setup.txt -> build/bdist.linux-armv7l/wheel/spci 2023-10-01T13:14:41,431 copying build/lib/spci/plot_property_distribution.py -> build/bdist.linux-armv7l/wheel/spci 2023-10-01T13:14:41,433 copying build/lib/spci/descriptors.py -> build/bdist.linux-armv7l/wheel/spci 2023-10-01T13:14:41,436 copying build/lib/spci/extractsdf.py -> build/bdist.linux-armv7l/wheel/spci 2023-10-01T13:14:41,438 copying build/lib/spci/find_frags_rdkit.py -> build/bdist.linux-armv7l/wheel/spci 2023-10-01T13:14:41,440 copying build/lib/spci/std_rules.xml -> build/bdist.linux-armv7l/wheel/spci 2023-10-01T13:14:41,442 copying build/lib/spci/filter_descriptors.py -> build/bdist.linux-armv7l/wheel/spci 2023-10-01T13:14:41,444 copying build/lib/spci/predict.py -> build/bdist.linux-armv7l/wheel/spci 2023-10-01T13:14:41,447 copying build/lib/spci/model.py -> build/bdist.linux-armv7l/wheel/spci 2023-10-01T13:14:41,450 copying build/lib/spci/calc_atomic_properties_chemaxon.py -> build/bdist.linux-armv7l/wheel/spci 2023-10-01T13:14:41,452 copying build/lib/spci/find_murcko_rdkit.py -> build/bdist.linux-armv7l/wheel/spci 2023-10-01T13:14:41,454 running install_egg_info 2023-10-01T13:14:41,487 Copying spci.egg-info to build/bdist.linux-armv7l/wheel/spci-1.1.3-py3.11.egg-info 2023-10-01T13:14:41,499 running install_scripts 2023-10-01T13:14:41,514 creating build/bdist.linux-armv7l/wheel/spci-1.1.3.dist-info/WHEEL 2023-10-01T13:14:41,516 creating '/tmp/pip-wheel-69twvnyl/spci-1.1.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-10-01T13:14:41,519 adding 'spci/__init__.py' 2023-10-01T13:14:41,520 adding 'spci/calc_atomic_properties_chemaxon.py' 2023-10-01T13:14:41,523 adding 'spci/calc_frag_contrib.py' 2023-10-01T13:14:41,524 adding 'spci/default.smarts' 2023-10-01T13:14:41,526 adding 'spci/descriptors.py' 2023-10-01T13:14:41,528 adding 'spci/extractsdf.py' 2023-10-01T13:14:41,530 adding 'spci/filter_descriptors.py' 2023-10-01T13:14:41,532 adding 'spci/find_frags_auto_rdkit.py' 2023-10-01T13:14:41,533 adding 'spci/find_frags_rdkit.py' 2023-10-01T13:14:41,535 adding 'spci/find_murcko_rdkit.py' 2023-10-01T13:14:41,538 adding 'spci/model.py' 2023-10-01T13:14:41,540 adding 'spci/mol_context.py' 2023-10-01T13:14:41,542 adding 'spci/plot_contributions.py' 2023-10-01T13:14:41,544 adding 'spci/plot_property_distribution.py' 2023-10-01T13:14:41,546 adding 'spci/predict.py' 2023-10-01T13:14:41,547 adding 'spci/sdf_field2title.py' 2023-10-01T13:14:41,548 adding 'spci/setup.txt' 2023-10-01T13:14:41,550 adding 'spci/sirms_file_class.py' 2023-10-01T13:14:41,556 adding 'spci/spci.py' 2023-10-01T13:14:41,557 adding 'spci/std_rules.xml' 2023-10-01T13:14:41,560 adding 'spci-1.1.3.dist-info/METADATA' 2023-10-01T13:14:41,561 adding 'spci-1.1.3.dist-info/WHEEL' 2023-10-01T13:14:41,562 adding 'spci-1.1.3.dist-info/entry_points.txt' 2023-10-01T13:14:41,563 adding 'spci-1.1.3.dist-info/top_level.txt' 2023-10-01T13:14:41,564 adding 'spci-1.1.3.dist-info/RECORD' 2023-10-01T13:14:41,566 removing build/bdist.linux-armv7l/wheel 2023-10-01T13:14:41,687 Building wheel for spci (setup.py): finished with status 'done' 2023-10-01T13:14:41,690 Created wheel for spci: filename=spci-1.1.3-py3-none-any.whl size=55658 sha256=127deacd2c92606c4cb4c25cd6b189ecadfa3aa118890069c4d334ff812257b6 2023-10-01T13:14:41,691 Stored in directory: /tmp/pip-ephem-wheel-cache-5ueu8v8q/wheels/1c/57/99/7a9c01788aa178d9f5bc0370fb9faa8cf7ec967574563affe3 2023-10-01T13:14:41,701 Successfully built spci 2023-10-01T13:14:41,707 Removed build tracker: '/tmp/pip-build-tracker-y5e6j4du'