2023-10-03T11:29:04,017 Created temporary directory: /tmp/pip-build-tracker-m3h7hs4l 2023-10-03T11:29:04,019 Initialized build tracking at /tmp/pip-build-tracker-m3h7hs4l 2023-10-03T11:29:04,019 Created build tracker: /tmp/pip-build-tracker-m3h7hs4l 2023-10-03T11:29:04,019 Entered build tracker: /tmp/pip-build-tracker-m3h7hs4l 2023-10-03T11:29:04,020 Created temporary directory: /tmp/pip-wheel-qaxd4wpr 2023-10-03T11:29:04,024 Created temporary directory: /tmp/pip-ephem-wheel-cache-19qt_21u 2023-10-03T11:29:04,047 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-10-03T11:29:04,051 2 location(s) to search for versions of pyfastchem: 2023-10-03T11:29:04,051 * https://pypi.org/simple/pyfastchem/ 2023-10-03T11:29:04,051 * https://www.piwheels.org/simple/pyfastchem/ 2023-10-03T11:29:04,052 Fetching project page and analyzing links: https://pypi.org/simple/pyfastchem/ 2023-10-03T11:29:04,052 Getting page https://pypi.org/simple/pyfastchem/ 2023-10-03T11:29:04,054 Found index url https://pypi.org/simple/ 2023-10-03T11:29:04,104 Fetched page https://pypi.org/simple/pyfastchem/ as application/vnd.pypi.simple.v1+json 2023-10-03T11:29:04,106 Found link https://files.pythonhosted.org/packages/bc/10/2ca5b5cd6b8294bc84b84a747895cf75eed2d783f40d4faca2bef251fddd/pyfastchem-2.0.tar.gz (from https://pypi.org/simple/pyfastchem/), version: 2.0 2023-10-03T11:29:04,106 Found link https://files.pythonhosted.org/packages/ea/0d/081ab03d1519c975f52a93c9aff91b12ab726e2391d4eb80383431c59d90/pyfastchem-2.1.tar.gz (from https://pypi.org/simple/pyfastchem/), version: 2.1 2023-10-03T11:29:04,107 Found link https://files.pythonhosted.org/packages/e7/e9/b869b26d4a71f6b0810bc49bcec8328d6c9f8a2b121eb5b783cf7f3cb513/pyfastchem-2.1.1.tar.gz (from https://pypi.org/simple/pyfastchem/), version: 2.1.1 2023-10-03T11:29:04,107 Found link https://files.pythonhosted.org/packages/f1/89/e1fd4174a676cb8b32e39777aa130e29d24c646f18eca6e7b8a954201e3a/pyfastchem-3.0.tar.gz (from https://pypi.org/simple/pyfastchem/), version: 3.0 2023-10-03T11:29:04,107 Found link https://files.pythonhosted.org/packages/4e/17/36bf119bc612cd32aa019f4c1c6f6d0b4fa4496060489e5433e520cfff07/pyfastchem-3.0.1.tar.gz (from https://pypi.org/simple/pyfastchem/), version: 3.0.1 2023-10-03T11:29:04,108 Found link https://files.pythonhosted.org/packages/d8/9e/bea812ab851536c2309eb2553d4b4a920aeeeee17114909cefb09112f36a/pyfastchem-3.0.2.tar.gz (from https://pypi.org/simple/pyfastchem/), version: 3.0.2 2023-10-03T11:29:04,108 Found link https://files.pythonhosted.org/packages/0e/48/b5afd76c51bff516e9e68e19d3d24caad7f66059427840d1231fea857e38/pyfastchem-3.0.3.tar.gz (from https://pypi.org/simple/pyfastchem/), version: 3.0.3 2023-10-03T11:29:04,108 Found link https://files.pythonhosted.org/packages/92/35/94918e03d60f4b9e13fd8d4f0047b355b02b1345da2b9c13f0cf29affe35/pyfastchem-3.0.4.tar.gz (from https://pypi.org/simple/pyfastchem/), version: 3.0.4 2023-10-03T11:29:04,108 Fetching project page and analyzing links: https://www.piwheels.org/simple/pyfastchem/ 2023-10-03T11:29:04,109 Getting page https://www.piwheels.org/simple/pyfastchem/ 2023-10-03T11:29:04,110 Found index url https://www.piwheels.org/simple/ 2023-10-03T11:29:04,168 Fetched page https://www.piwheels.org/simple/pyfastchem/ as text/html 2023-10-03T11:29:04,175 Skipping link: No binaries permitted for pyfastchem: https://www.piwheels.org/simple/pyfastchem/pyfastchem-2.1.1-cp311-cp311-linux_armv7l.whl#sha256=126f54c211c16369ecb89cc679c55c78031980299b453c0f3fa81150c7febc0c (from https://www.piwheels.org/simple/pyfastchem/) 2023-10-03T11:29:04,175 Skipping link: No binaries permitted for pyfastchem: 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hashes to check 1 links for project 'pyfastchem': discarding no candidates 2023-10-03T11:29:04,213 Collecting pyfastchem==3.0.3 2023-10-03T11:29:04,215 Created temporary directory: /tmp/pip-unpack-32ejihaz 2023-10-03T11:29:04,258 Downloading pyfastchem-3.0.3.tar.gz (38 kB) 2023-10-03T11:29:04,371 Added pyfastchem==3.0.3 from https://files.pythonhosted.org/packages/0e/48/b5afd76c51bff516e9e68e19d3d24caad7f66059427840d1231fea857e38/pyfastchem-3.0.3.tar.gz to build tracker '/tmp/pip-build-tracker-m3h7hs4l' 2023-10-03T11:29:04,376 Created temporary directory: /tmp/pip-build-env-9e2daysf 2023-10-03T11:29:04,386 Installing build dependencies: started 2023-10-03T11:29:04,387 Running command pip subprocess to install build dependencies 2023-10-03T11:29:05,563 Using pip 23.2.1 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9) 2023-10-03T11:29:06,085 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-10-03T11:29:07,670 Collecting setuptools 2023-10-03T11:29:07,752 Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.2.2-py3-none-any.whl (807 kB) 2023-10-03T11:29:08,012 Collecting wheel 2023-10-03T11:29:08,033 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB) 2023-10-03T11:29:08,365 Collecting setuptools_scm 2023-10-03T11:29:08,384 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.0.4-py3-none-any.whl (42 kB) 2023-10-03T11:29:08,573 Collecting pybind11 2023-10-03T11:29:08,601 Using cached https://www.piwheels.org/simple/pybind11/pybind11-2.11.1-py3-none-any.whl (227 kB) 2023-10-03T11:29:09,002 Collecting packaging>=20 (from setuptools_scm) 2023-10-03T11:29:09,023 Using cached https://www.piwheels.org/simple/packaging/packaging-23.2-py3-none-any.whl (53 kB) 2023-10-03T11:29:09,150 Collecting typing-extensions (from setuptools_scm) 2023-10-03T11:29:09,167 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.8.0-py3-none-any.whl (31 kB) 2023-10-03T11:29:09,282 Collecting tomli>=1 (from setuptools_scm) 2023-10-03T11:29:09,298 Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB) 2023-10-03T11:29:10,888 Installing collected packages: wheel, typing-extensions, tomli, setuptools, pybind11, packaging, setuptools_scm 2023-10-03T11:29:11,113 Creating /tmp/pip-build-env-9e2daysf/overlay/bin 2023-10-03T11:29:11,116 changing mode of /tmp/pip-build-env-9e2daysf/overlay/bin/wheel to 755 2023-10-03T11:29:13,435 changing mode of /tmp/pip-build-env-9e2daysf/overlay/bin/pybind11-config to 755 2023-10-03T11:29:13,780 Successfully installed packaging-23.2 pybind11-2.11.1 setuptools-68.2.2 setuptools_scm-8.0.4 tomli-2.0.1 typing-extensions-4.8.0 wheel-0.41.2 2023-10-03T11:29:14,261 Installing build dependencies: finished with status 'done' 2023-10-03T11:29:14,266 Getting requirements to build wheel: started 2023-10-03T11:29:14,267 Running command Getting requirements to build wheel 2023-10-03T11:29:14,920 running egg_info 2023-10-03T11:29:14,930 writing pyfastchem.egg-info/PKG-INFO 2023-10-03T11:29:14,933 writing dependency_links to pyfastchem.egg-info/dependency_links.txt 2023-10-03T11:29:14,935 writing top-level names to pyfastchem.egg-info/top_level.txt 2023-10-03T11:29:14,977 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2023-10-03T11:29:14,986 reading manifest file 'pyfastchem.egg-info/SOURCES.txt' 2023-10-03T11:29:14,989 reading manifest template 'MANIFEST.in' 2023-10-03T11:29:15,016 writing manifest file 'pyfastchem.egg-info/SOURCES.txt' 2023-10-03T11:29:15,089 Getting requirements to build wheel: finished with status 'done' 2023-10-03T11:29:15,100 Created temporary directory: /tmp/pip-modern-metadata-5bkyw8ji 2023-10-03T11:29:15,102 Preparing metadata (pyproject.toml): started 2023-10-03T11:29:15,103 Running command Preparing metadata (pyproject.toml) 2023-10-03T11:29:15,673 running dist_info 2023-10-03T11:29:15,697 creating /tmp/pip-modern-metadata-5bkyw8ji/pyfastchem.egg-info 2023-10-03T11:29:15,704 writing /tmp/pip-modern-metadata-5bkyw8ji/pyfastchem.egg-info/PKG-INFO 2023-10-03T11:29:15,707 writing dependency_links to /tmp/pip-modern-metadata-5bkyw8ji/pyfastchem.egg-info/dependency_links.txt 2023-10-03T11:29:15,710 writing top-level names to /tmp/pip-modern-metadata-5bkyw8ji/pyfastchem.egg-info/top_level.txt 2023-10-03T11:29:15,711 writing manifest file '/tmp/pip-modern-metadata-5bkyw8ji/pyfastchem.egg-info/SOURCES.txt' 2023-10-03T11:29:15,751 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2023-10-03T11:29:15,758 reading manifest file '/tmp/pip-modern-metadata-5bkyw8ji/pyfastchem.egg-info/SOURCES.txt' 2023-10-03T11:29:15,761 reading manifest template 'MANIFEST.in' 2023-10-03T11:29:15,794 writing manifest file '/tmp/pip-modern-metadata-5bkyw8ji/pyfastchem.egg-info/SOURCES.txt' 2023-10-03T11:29:15,795 creating '/tmp/pip-modern-metadata-5bkyw8ji/pyfastchem-3.0.3.dist-info' 2023-10-03T11:29:15,985 Preparing metadata (pyproject.toml): finished with status 'done' 2023-10-03T11:29:15,991 Source in /tmp/pip-wheel-qaxd4wpr/pyfastchem_9cba68013cb64c5e97769bfef33e0946 has version 3.0.3, which satisfies requirement pyfastchem==3.0.3 from https://files.pythonhosted.org/packages/0e/48/b5afd76c51bff516e9e68e19d3d24caad7f66059427840d1231fea857e38/pyfastchem-3.0.3.tar.gz 2023-10-03T11:29:15,992 Removed pyfastchem==3.0.3 from https://files.pythonhosted.org/packages/0e/48/b5afd76c51bff516e9e68e19d3d24caad7f66059427840d1231fea857e38/pyfastchem-3.0.3.tar.gz from build tracker '/tmp/pip-build-tracker-m3h7hs4l' 2023-10-03T11:29:15,996 Created temporary directory: /tmp/pip-unpack-rs72ag3i 2023-10-03T11:29:15,996 Created temporary directory: /tmp/pip-unpack-gmz276mw 2023-10-03T11:29:15,998 Building wheels for collected packages: pyfastchem 2023-10-03T11:29:16,002 Created temporary directory: /tmp/pip-wheel-07qmqebu 2023-10-03T11:29:16,003 Destination directory: /tmp/pip-wheel-07qmqebu 2023-10-03T11:29:16,005 Building wheel for pyfastchem (pyproject.toml): started 2023-10-03T11:29:16,006 Running command Building wheel for pyfastchem (pyproject.toml) 2023-10-03T11:29:16,601 running bdist_wheel 2023-10-03T11:29:16,641 running build 2023-10-03T11:29:16,641 running build_ext 2023-10-03T11:29:16,646 creating build 2023-10-03T11:29:16,646 creating build/temp.linux-armv7l-cpython-39 2023-10-03T11:29:16,649 Checking if compiler supports OpenMP 2023-10-03T11:29:16,649 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -c /tmp/pip-wheel-qaxd4wpr/pyfastchem_9cba68013cb64c5e97769bfef33e0946/build/temp.linux-armv7l-cpython-39/openmptest8z8yg2_h.cpp -o /tmp/pip-wheel-qaxd4wpr/pyfastchem_9cba68013cb64c5e97769bfef33e0946/build/temp.linux-armv7l-cpython-39/openmptest8z8yg2_h.o -fopenmp 2023-10-03T11:29:16,744 Enabling OpenMP support 2023-10-03T11:29:16,745 building 'pyfastchem' extension 2023-10-03T11:29:16,746 creating build/temp.linux-armv7l-cpython-39/fastchem_src 2023-10-03T11:29:16,747 creating build/temp.linux-armv7l-cpython-39/fastchem_src/condensed_phase 2023-10-03T11:29:16,748 creating build/temp.linux-armv7l-cpython-39/fastchem_src/elements 2023-10-03T11:29:16,749 creating build/temp.linux-armv7l-cpython-39/fastchem_src/gas_phase 2023-10-03T11:29:16,750 creating build/temp.linux-armv7l-cpython-39/python 2023-10-03T11:29:16,751 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -D_SETUP_PY=1 -I/tmp/pip-build-env-9e2daysf/overlay/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c fastchem_src/calc_densities.cpp -o build/temp.linux-armv7l-cpython-39/fastchem_src/calc_densities.o -fvisibility=hidden -g0 -std=c++11 -fopenmp 2023-10-03T11:29:16,978 In file included from fastchem_src/condensed_phase/condensed_phase.h:29, 2023-10-03T11:29:16,978 from fastchem_src/fastchem.h:34, 2023-10-03T11:29:16,978 from fastchem_src/calc_densities.cpp:21: 2023-10-03T11:29:16,978 fastchem_src/condensed_phase/solver.h:32:10: fatal error: ../../_ext/Eigen/Dense: No such file or directory 2023-10-03T11:29:16,978 32 | #include "../../_ext/Eigen/Dense" 2023-10-03T11:29:16,979 | ^~~~~~~~~~~~~~~~~~~~~~~~ 2023-10-03T11:29:16,979 compilation terminated. 2023-10-03T11:29:16,984 error: command '/usr/bin/arm-linux-gnueabihf-gcc' failed with exit code 1 2023-10-03T11:29:17,064 ERROR: [present-rich] Building wheel for pyfastchem (pyproject.toml) exited with 1 2023-10-03T11:29:17,081 [bold magenta]full command[/]: [blue]/usr/bin/python3 /usr/local/lib/python3.9/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py build_wheel /tmp/tmpwobt1pim[/] 2023-10-03T11:29:17,082 [bold magenta]cwd[/]: /tmp/pip-wheel-qaxd4wpr/pyfastchem_9cba68013cb64c5e97769bfef33e0946 2023-10-03T11:29:17,082 Building wheel for pyfastchem (pyproject.toml): finished with status 'error' 2023-10-03T11:29:17,084 ERROR: Failed building wheel for pyfastchem 2023-10-03T11:29:17,086 Failed to build pyfastchem 2023-10-03T11:29:17,087 ERROR: Failed to build one or more wheels 2023-10-03T11:29:17,088 Exception information: 2023-10-03T11:29:17,088 Traceback (most recent call last): 2023-10-03T11:29:17,088 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper 2023-10-03T11:29:17,088 status = run_func(*args) 2023-10-03T11:29:17,088 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper 2023-10-03T11:29:17,088 return func(self, options, args) 2023-10-03T11:29:17,088 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/commands/wheel.py", line 181, in run 2023-10-03T11:29:17,088 raise CommandError("Failed to build one or more wheels") 2023-10-03T11:29:17,088 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2023-10-03T11:29:17,091 Removed build tracker: '/tmp/pip-build-tracker-m3h7hs4l'