2023-10-04T06:13:04,761 Created temporary directory: /tmp/pip-build-tracker-ey_qorjx 2023-10-04T06:13:04,763 Initialized build tracking at /tmp/pip-build-tracker-ey_qorjx 2023-10-04T06:13:04,763 Created build tracker: /tmp/pip-build-tracker-ey_qorjx 2023-10-04T06:13:04,764 Entered build tracker: /tmp/pip-build-tracker-ey_qorjx 2023-10-04T06:13:04,764 Created temporary directory: /tmp/pip-wheel-imaqy2jt 2023-10-04T06:13:04,769 Created temporary directory: /tmp/pip-ephem-wheel-cache-pwlkif3h 2023-10-04T06:13:04,794 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-10-04T06:13:04,798 2 location(s) to search for versions of superpang: 2023-10-04T06:13:04,798 * https://pypi.org/simple/superpang/ 2023-10-04T06:13:04,798 * https://www.piwheels.org/simple/superpang/ 2023-10-04T06:13:04,798 Fetching project page and analyzing links: https://pypi.org/simple/superpang/ 2023-10-04T06:13:04,799 Getting page https://pypi.org/simple/superpang/ 2023-10-04T06:13:04,800 Found index url https://pypi.org/simple/ 2023-10-04T06:13:04,931 Fetched page https://pypi.org/simple/superpang/ as application/vnd.pypi.simple.v1+json 2023-10-04T06:13:04,935 Found link https://files.pythonhosted.org/packages/9c/57/83a3974eb6f1728623e29d7fc3c5f3ccb0702c44d756e2b1f6f1b92798e1/SuperPang-0.7.0.post1.tar.gz (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 0.7.0.post1 2023-10-04T06:13:04,936 Found link https://files.pythonhosted.org/packages/e8/23/ca26f8c2506d465d8b8383c1b8b60d052a2f86b58de691502e328dc925b0/SuperPang-0.8.0.tar.gz (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 0.8.0 2023-10-04T06:13:04,936 Found link https://files.pythonhosted.org/packages/4a/4f/ece0df30b902a9e6ff8d63632251d4c67ecd909cd7bde08a142d56a24880/SuperPang-0.8.1.tar.gz (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 0.8.1 2023-10-04T06:13:04,937 Found link https://files.pythonhosted.org/packages/fc/fb/e92ac7479a7f8edb9864ece82b66104ad145015cc3abc02a4a37c60c4e32/SuperPang-0.9.0.tar.gz (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 0.9.0 2023-10-04T06:13:04,938 Found link https://files.pythonhosted.org/packages/fa/30/f59e38f3c4cde22e00716f8478fbcbe73d4e0b7c4ac11bf7354f4682794f/SuperPang-0.9.1.tar.gz (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 0.9.1 2023-10-04T06:13:04,938 Found link https://files.pythonhosted.org/packages/7d/52/14b5e6e30655f1a4aa2fc6f1d66126075c5b8e9a204344f34ddf7f15300a/SuperPang-0.9.3.post1.tar.gz (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 0.9.3.post1 2023-10-04T06:13:04,939 Found link https://files.pythonhosted.org/packages/36/82/bb9265ecfc16b64ed3851e8f46d6c63fe91763416f59cc1cc39bb1db03c3/SuperPang-0.9.4b1.tar.gz (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 0.9.4b1 2023-10-04T06:13:04,939 Found link https://files.pythonhosted.org/packages/31/6c/17a442b028bf9c3e55011670d5d787513bcd761172b94bee703eeac53c77/SuperPang-0.9.4.tar.gz (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 0.9.4 2023-10-04T06:13:04,940 Found link https://files.pythonhosted.org/packages/c1/54/331e16a3c04b5e29d33ab3b4a2ca0e0f2eea68cc545f325f4181c41c3009/SuperPang-0.9.5.tar.gz (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 0.9.5 2023-10-04T06:13:04,940 Found link https://files.pythonhosted.org/packages/48/8e/57bc26eee0cbc2b81934e0b0b949baa13ceb6f906b5c0fd950a905ba7426/SuperPang-0.9.6.tar.gz (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 0.9.6 2023-10-04T06:13:04,941 Found link https://files.pythonhosted.org/packages/4e/d1/6bd16f697e9c2bd174a907232f8b347fcb6e69c4cb0cb43e33da93e59ba9/SuperPang-1.0.0.tar.gz (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 1.0.0 2023-10-04T06:13:04,941 Found link https://files.pythonhosted.org/packages/d9/37/086028f99bbf4c6bb484cf19d8afc1c1dcc994838051a2735535007edd7d/SuperPang-1.1.0.tar.gz (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 1.1.0 2023-10-04T06:13:04,942 Found link https://files.pythonhosted.org/packages/76/72/0f49b3c52d5c0b65291481efc7dad0d0de90ce91d6ef311dae6c697731bf/SuperPang-1.1.0.post1.tar.gz (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 1.1.0.post1 2023-10-04T06:13:04,943 Found link https://files.pythonhosted.org/packages/e9/76/480cf52a521b709421ea14b0ef982fe8fb4aeb4ef9b6a2e078a967ae6c2c/SuperPang-1.1.0.post2.tar.gz (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 1.1.0.post2 2023-10-04T06:13:04,943 Found link https://files.pythonhosted.org/packages/40/b9/b8fa8aa5244430270e0da993b35db855f9e383ef9e174123cd5daf90ea98/SuperPang-1.1.0.post3.tar.gz (from https://pypi.org/simple/superpang/) (requires-python:>=3.8), version: 1.1.0.post3 2023-10-04T06:13:04,944 Fetching project page and analyzing links: https://www.piwheels.org/simple/superpang/ 2023-10-04T06:13:04,944 Getting page https://www.piwheels.org/simple/superpang/ 2023-10-04T06:13:04,945 Found index url https://www.piwheels.org/simple/ 2023-10-04T06:13:05,020 Fetched page https://www.piwheels.org/simple/superpang/ as text/html 2023-10-04T06:13:05,026 Skipping link: No binaries permitted for superpang: https://www.piwheels.org/simple/superpang/SuperPang-1.1.0.post3-cp311-cp311-linux_armv7l.whl#sha256=e716a681ae855bca2320aa03d105e1f8717c2373b658ce439fc8a3df68ff5104 (from https://www.piwheels.org/simple/superpang/) (requires-python:>=3.8) 2023-10-04T06:13:05,027 Skipping link: No binaries permitted for superpang: https://www.piwheels.org/simple/superpang/SuperPang-1.1.0.post3-cp311-cp311-linux_armv6l.whl#sha256=e716a681ae855bca2320aa03d105e1f8717c2373b658ce439fc8a3df68ff5104 (from https://www.piwheels.org/simple/superpang/) (requires-python:>=3.8) 2023-10-04T06:13:05,027 Skipping link: No binaries permitted for superpang: https://www.piwheels.org/simple/superpang/SuperPang-1.1.0.post2-cp311-cp311-linux_armv7l.whl#sha256=fa737c29aec7aa2ab4bb3336184ec5228d76d4a73cdb14573a501028be864d91 (from https://www.piwheels.org/simple/superpang/) (requires-python:>=3.8) 2023-10-04T06:13:05,028 Skipping link: No binaries permitted for superpang: https://www.piwheels.org/simple/superpang/SuperPang-1.1.0.post2-cp311-cp311-linux_armv6l.whl#sha256=fa737c29aec7aa2ab4bb3336184ec5228d76d4a73cdb14573a501028be864d91 (from https://www.piwheels.org/simple/superpang/) (requires-python:>=3.8) 2023-10-04T06:13:05,028 Skipping link: No binaries permitted for superpang: https://www.piwheels.org/simple/superpang/SuperPang-1.1.0.post2-cp39-cp39-linux_armv7l.whl#sha256=c64a6f9ad643d69f12896e812f25fa042d40ecf6d0950b3034e96bc7a5938a6b (from https://www.piwheels.org/simple/superpang/) (requires-python:>=3.8) 2023-10-04T06:13:05,028 Skipping link: No binaries permitted for superpang: https://www.piwheels.org/simple/superpang/SuperPang-1.1.0.post2-cp39-cp39-linux_armv6l.whl#sha256=c64a6f9ad643d69f12896e812f25fa042d40ecf6d0950b3034e96bc7a5938a6b (from https://www.piwheels.org/simple/superpang/) (requires-python:>=3.8) 2023-10-04T06:13:05,028 Skipping link: No binaries permitted for superpang: https://www.piwheels.org/simple/superpang/SuperPang-1.1.0.post1-cp311-cp311-linux_armv7l.whl#sha256=e7ebf773386b60b889573272e6268f6d265aa1325ef080a69e180252f008ff59 (from https://www.piwheels.org/simple/superpang/) (requires-python:>=3.8) 2023-10-04T06:13:05,029 Skipping link: No binaries permitted for superpang: https://www.piwheels.org/simple/superpang/SuperPang-1.1.0.post1-cp311-cp311-linux_armv6l.whl#sha256=e7ebf773386b60b889573272e6268f6d265aa1325ef080a69e180252f008ff59 (from https://www.piwheels.org/simple/superpang/) (requires-python:>=3.8) 2023-10-04T06:13:05,029 Skipping link: No binaries permitted for superpang: https://www.piwheels.org/simple/superpang/SuperPang-1.1.0.post1-cp39-cp39-linux_armv7l.whl#sha256=350f22e98807e29abd133ce5d877b31a3fc3d59ae687fa6d821a4283a79d7933 (from https://www.piwheels.org/simple/superpang/) (requires-python:>=3.8) 2023-10-04T06:13:05,029 Skipping link: No binaries permitted for superpang: https://www.piwheels.org/simple/superpang/SuperPang-1.1.0.post1-cp39-cp39-linux_armv6l.whl#sha256=350f22e98807e29abd133ce5d877b31a3fc3d59ae687fa6d821a4283a79d7933 (from https://www.piwheels.org/simple/superpang/) (requires-python:>=3.8) 2023-10-04T06:13:05,030 Skipping link: No binaries permitted for superpang: https://www.piwheels.org/simple/superpang/SuperPang-0.7.0.post1-py3-none-any.whl#sha256=7b5427f75343e311a397b472cfed232b2549783866aa715ac6cee45857734501 (from https://www.piwheels.org/simple/superpang/) (requires-python:>=3.8) 2023-10-04T06:13:05,030 Skipping link: not a file: https://www.piwheels.org/simple/superpang/ 2023-10-04T06:13:05,030 Skipping link: not a file: https://pypi.org/simple/superpang/ 2023-10-04T06:13:05,057 Given no hashes to check 1 links for project 'superpang': discarding no candidates 2023-10-04T06:13:05,079 Collecting superpang==1.1.0.post3 2023-10-04T06:13:05,082 Created temporary directory: /tmp/pip-unpack-er0sb16e 2023-10-04T06:13:05,221 Downloading SuperPang-1.1.0.post3.tar.gz (6.2 MB) 2023-10-04T06:13:08,270 Added superpang==1.1.0.post3 from https://files.pythonhosted.org/packages/40/b9/b8fa8aa5244430270e0da993b35db855f9e383ef9e174123cd5daf90ea98/SuperPang-1.1.0.post3.tar.gz to build tracker '/tmp/pip-build-tracker-ey_qorjx' 2023-10-04T06:13:08,276 Created temporary directory: /tmp/pip-build-env-2zqkxgnq 2023-10-04T06:13:08,287 Installing build dependencies: started 2023-10-04T06:13:08,288 Running command pip subprocess to install build dependencies 2023-10-04T06:13:09,455 Using pip 23.2.1 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9) 2023-10-04T06:13:09,982 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-10-04T06:13:11,524 Collecting setuptools>=61.0 2023-10-04T06:13:11,596 Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.2.2-py3-none-any.whl (807 kB) 2023-10-04T06:13:12,956 Collecting numpy 2023-10-04T06:13:14,368 Using cached https://www.piwheels.org/simple/numpy/numpy-1.26.0-cp39-cp39-linux_armv7l.whl (19.4 MB) 2023-10-04T06:13:16,567 Collecting cython 2023-10-04T06:13:17,311 Using cached https://www.piwheels.org/simple/cython/Cython-3.0.2-cp39-cp39-linux_armv7l.whl (10.7 MB) 2023-10-04T06:13:19,328 Installing collected packages: setuptools, numpy, cython 2023-10-04T06:13:29,376 Creating /tmp/pip-build-env-2zqkxgnq/overlay/bin 2023-10-04T06:13:29,379 changing mode of /tmp/pip-build-env-2zqkxgnq/overlay/bin/f2py to 755 2023-10-04T06:13:32,808 changing mode of /tmp/pip-build-env-2zqkxgnq/overlay/bin/cygdb to 755 2023-10-04T06:13:32,810 changing mode of /tmp/pip-build-env-2zqkxgnq/overlay/bin/cython to 755 2023-10-04T06:13:32,813 changing mode of /tmp/pip-build-env-2zqkxgnq/overlay/bin/cythonize to 755 2023-10-04T06:13:32,836 ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts. 2023-10-04T06:13:32,836 scipy 1.8.1 requires numpy<1.25.0,>=1.17.3, but you have numpy 1.26.0 which is incompatible. 2023-10-04T06:13:32,837 Successfully installed cython-3.0.2 numpy-1.26.0 setuptools-68.2.2 2023-10-04T06:13:33,425 Installing build dependencies: finished with status 'done' 2023-10-04T06:13:33,430 Getting requirements to build wheel: started 2023-10-04T06:13:33,431 Running command Getting requirements to build wheel 2023-10-04T06:13:34,280 Getting requirements to build wheel: finished with status 'done' 2023-10-04T06:13:34,296 Installing backend dependencies: started 2023-10-04T06:13:34,297 Running command pip subprocess to install backend dependencies 2023-10-04T06:13:35,535 Using pip 23.2.1 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9) 2023-10-04T06:13:36,117 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-10-04T06:13:36,484 Collecting wheel 2023-10-04T06:13:36,502 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB) 2023-10-04T06:13:37,844 Installing collected packages: wheel 2023-10-04T06:13:38,073 Creating /tmp/pip-build-env-2zqkxgnq/normal/bin 2023-10-04T06:13:38,076 changing mode of /tmp/pip-build-env-2zqkxgnq/normal/bin/wheel to 755 2023-10-04T06:13:38,089 Successfully installed wheel-0.41.2 2023-10-04T06:13:38,487 Installing backend dependencies: finished with status 'done' 2023-10-04T06:13:38,489 Created temporary directory: /tmp/pip-modern-metadata-yo85n_bm 2023-10-04T06:13:38,492 Preparing metadata (pyproject.toml): started 2023-10-04T06:13:38,493 Running command Preparing metadata (pyproject.toml) 2023-10-04T06:13:39,981 running dist_info 2023-10-04T06:13:40,012 creating /tmp/pip-modern-metadata-yo85n_bm/SuperPang.egg-info 2023-10-04T06:13:40,017 writing /tmp/pip-modern-metadata-yo85n_bm/SuperPang.egg-info/PKG-INFO 2023-10-04T06:13:40,021 writing dependency_links to /tmp/pip-modern-metadata-yo85n_bm/SuperPang.egg-info/dependency_links.txt 2023-10-04T06:13:40,023 writing entry points to /tmp/pip-modern-metadata-yo85n_bm/SuperPang.egg-info/entry_points.txt 2023-10-04T06:13:40,024 writing requirements to /tmp/pip-modern-metadata-yo85n_bm/SuperPang.egg-info/requires.txt 2023-10-04T06:13:40,025 writing top-level names to /tmp/pip-modern-metadata-yo85n_bm/SuperPang.egg-info/top_level.txt 2023-10-04T06:13:40,027 writing manifest file '/tmp/pip-modern-metadata-yo85n_bm/SuperPang.egg-info/SOURCES.txt' 2023-10-04T06:13:40,053 reading manifest file '/tmp/pip-modern-metadata-yo85n_bm/SuperPang.egg-info/SOURCES.txt' 2023-10-04T06:13:40,056 reading manifest template 'MANIFEST.in' 2023-10-04T06:13:40,058 adding license file 'LICENSE' 2023-10-04T06:13:40,061 writing manifest file '/tmp/pip-modern-metadata-yo85n_bm/SuperPang.egg-info/SOURCES.txt' 2023-10-04T06:13:40,062 creating '/tmp/pip-modern-metadata-yo85n_bm/SuperPang-1.1.0.post3.dist-info' 2023-10-04T06:13:40,228 Preparing metadata (pyproject.toml): finished with status 'done' 2023-10-04T06:13:40,235 Source in /tmp/pip-wheel-imaqy2jt/superpang_a81fc1cd8785427caa20b1432a0f2bba has version 1.1.0.post3, which satisfies requirement superpang==1.1.0.post3 from https://files.pythonhosted.org/packages/40/b9/b8fa8aa5244430270e0da993b35db855f9e383ef9e174123cd5daf90ea98/SuperPang-1.1.0.post3.tar.gz 2023-10-04T06:13:40,236 Removed superpang==1.1.0.post3 from https://files.pythonhosted.org/packages/40/b9/b8fa8aa5244430270e0da993b35db855f9e383ef9e174123cd5daf90ea98/SuperPang-1.1.0.post3.tar.gz from build tracker '/tmp/pip-build-tracker-ey_qorjx' 2023-10-04T06:13:40,242 Created temporary directory: /tmp/pip-unpack-9x8mbgf3 2023-10-04T06:13:40,243 Created temporary directory: /tmp/pip-unpack-bpj_b1ry 2023-10-04T06:13:40,250 Building wheels for collected packages: superpang 2023-10-04T06:13:40,255 Created temporary directory: /tmp/pip-wheel-z9t68fjn 2023-10-04T06:13:40,255 Destination directory: /tmp/pip-wheel-z9t68fjn 2023-10-04T06:13:40,257 Building wheel for superpang (pyproject.toml): started 2023-10-04T06:13:40,258 Running command Building wheel for superpang (pyproject.toml) 2023-10-04T06:13:41,457 running bdist_wheel 2023-10-04T06:13:41,505 running build 2023-10-04T06:13:41,506 running build_py 2023-10-04T06:13:41,511 creating build 2023-10-04T06:13:41,512 creating build/lib.linux-armv7l-cpython-39 2023-10-04T06:13:41,512 creating build/lib.linux-armv7l-cpython-39/superpang 2023-10-04T06:13:41,514 copying src/superpang/__init__.py -> build/lib.linux-armv7l-cpython-39/superpang 2023-10-04T06:13:41,516 creating build/lib.linux-armv7l-cpython-39/superpang/lib 2023-10-04T06:13:41,517 copying src/superpang/lib/utils.py -> build/lib.linux-armv7l-cpython-39/superpang/lib 2023-10-04T06:13:41,519 copying src/superpang/lib/Assembler.py -> build/lib.linux-armv7l-cpython-39/superpang/lib 2023-10-04T06:13:41,522 copying src/superpang/lib/__init__.py -> build/lib.linux-armv7l-cpython-39/superpang/lib 2023-10-04T06:13:41,524 creating build/lib.linux-armv7l-cpython-39/superpang/scripts 2023-10-04T06:13:41,525 copying src/superpang/scripts/SuperPang.py -> build/lib.linux-armv7l-cpython-39/superpang/scripts 2023-10-04T06:13:41,528 copying src/superpang/scripts/condense-edges.py -> build/lib.linux-armv7l-cpython-39/superpang/scripts 2023-10-04T06:13:41,530 copying src/superpang/scripts/homogenize.py -> build/lib.linux-armv7l-cpython-39/superpang/scripts 2023-10-04T06:13:41,533 copying src/superpang/scripts/test-SuperPang.py -> build/lib.linux-armv7l-cpython-39/superpang/scripts 2023-10-04T06:13:41,534 copying src/superpang/scripts/__init__.py -> build/lib.linux-armv7l-cpython-39/superpang/scripts 2023-10-04T06:13:41,536 copying src/superpang/scripts/test_SuperPang.py -> build/lib.linux-armv7l-cpython-39/superpang/scripts 2023-10-04T06:13:41,537 running egg_info 2023-10-04T06:13:41,542 writing src/SuperPang.egg-info/PKG-INFO 2023-10-04T06:13:41,546 writing dependency_links to src/SuperPang.egg-info/dependency_links.txt 2023-10-04T06:13:41,548 writing entry points to src/SuperPang.egg-info/entry_points.txt 2023-10-04T06:13:41,549 writing requirements to src/SuperPang.egg-info/requires.txt 2023-10-04T06:13:41,550 writing top-level names to src/SuperPang.egg-info/top_level.txt 2023-10-04T06:13:41,565 reading manifest file 'src/SuperPang.egg-info/SOURCES.txt' 2023-10-04T06:13:41,568 reading manifest template 'MANIFEST.in' 2023-10-04T06:13:41,570 adding license file 'LICENSE' 2023-10-04T06:13:41,573 writing manifest file 'src/SuperPang.egg-info/SOURCES.txt' 2023-10-04T06:13:41,577 copying src/superpang/VERSION -> build/lib.linux-armv7l-cpython-39/superpang 2023-10-04T06:13:41,579 copying src/superpang/lib/Compressor.pyx -> build/lib.linux-armv7l-cpython-39/superpang/lib 2023-10-04T06:13:41,582 copying src/superpang/lib/cutils.pyx -> build/lib.linux-armv7l-cpython-39/superpang/lib 2023-10-04T06:13:41,584 copying src/superpang/lib/vtools.pyx -> build/lib.linux-armv7l-cpython-39/superpang/lib 2023-10-04T06:13:41,587 creating build/lib.linux-armv7l-cpython-39/superpang/test_data 2023-10-04T06:13:41,588 copying src/superpang/test_data/2636415981.fna -> build/lib.linux-armv7l-cpython-39/superpang/test_data 2023-10-04T06:13:41,633 copying src/superpang/test_data/2636416036.fna -> build/lib.linux-armv7l-cpython-39/superpang/test_data 2023-10-04T06:13:41,667 copying src/superpang/test_data/2636416061.fna -> build/lib.linux-armv7l-cpython-39/superpang/test_data 2023-10-04T06:13:41,703 copying src/superpang/test_data/2636416062.fna -> build/lib.linux-armv7l-cpython-39/superpang/test_data 2023-10-04T06:13:41,787 copying src/superpang/test_data/2639762512.fna -> build/lib.linux-armv7l-cpython-39/superpang/test_data 2023-10-04T06:13:41,820 copying src/superpang/test_data/2639762514.fna -> build/lib.linux-armv7l-cpython-39/superpang/test_data 2023-10-04T06:13:41,852 copying src/superpang/test_data/2639762515.fna -> build/lib.linux-armv7l-cpython-39/superpang/test_data 2023-10-04T06:13:41,890 copying src/superpang/test_data/2639762516.fna -> build/lib.linux-armv7l-cpython-39/superpang/test_data 2023-10-04T06:13:41,934 copying src/superpang/test_data/2844342787.fna -> build/lib.linux-armv7l-cpython-39/superpang/test_data 2023-10-04T06:13:41,979 running build_ext 2023-10-04T06:13:46,240 Compiling src/superpang/lib/Compressor.pyx because it changed. 2023-10-04T06:13:46,240 [1/1] Cythonizing src/superpang/lib/Compressor.pyx 2023-10-04T06:13:46,240 building 'superpang.lib.Compressor' extension 2023-10-04T06:13:46,241 creating build/temp.linux-armv7l-cpython-39 2023-10-04T06:13:46,242 creating build/temp.linux-armv7l-cpython-39/src 2023-10-04T06:13:46,243 creating build/temp.linux-armv7l-cpython-39/src/superpang 2023-10-04T06:13:46,243 creating build/temp.linux-armv7l-cpython-39/src/superpang/lib 2023-10-04T06:13:46,244 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-2zqkxgnq/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c src/superpang/lib/Compressor.c -o build/temp.linux-armv7l-cpython-39/src/superpang/lib/Compressor.o 2023-10-04T06:13:46,602 In file included from /tmp/pip-build-env-2zqkxgnq/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929, 2023-10-04T06:13:46,602 from /tmp/pip-build-env-2zqkxgnq/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-10-04T06:13:46,602 from /tmp/pip-build-env-2zqkxgnq/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-10-04T06:13:46,602 from src/superpang/lib/Compressor.c:1176: 2023-10-04T06:13:46,603 /tmp/pip-build-env-2zqkxgnq/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-10-04T06:13:46,603 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-10-04T06:13:46,603 | ^~~~~~~ 2023-10-04T06:14:07,596 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/superpang/lib/Compressor.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/superpang/lib/Compressor.cpython-39-arm-linux-gnueabihf.so 2023-10-04T06:14:10,070 Compiling src/superpang/lib/cutils.pyx because it changed. 2023-10-04T06:14:10,071 [1/1] Cythonizing src/superpang/lib/cutils.pyx 2023-10-04T06:14:10,071 building 'superpang.lib.cutils' extension 2023-10-04T06:14:10,072 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-2zqkxgnq/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c src/superpang/lib/cutils.c -o build/temp.linux-armv7l-cpython-39/src/superpang/lib/cutils.o 2023-10-04T06:14:30,446 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/superpang/lib/cutils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/superpang/lib/cutils.cpython-39-arm-linux-gnueabihf.so 2023-10-04T06:14:33,175 Compiling src/superpang/lib/vtools.pyx because it changed. 2023-10-04T06:14:33,175 [1/1] Cythonizing src/superpang/lib/vtools.pyx 2023-10-04T06:14:33,176 building 'superpang.lib.vtools' extension 2023-10-04T06:14:33,176 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-2zqkxgnq/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c src/superpang/lib/vtools.c -o build/temp.linux-armv7l-cpython-39/src/superpang/lib/vtools.o 2023-10-04T06:14:33,957 In file included from /tmp/pip-build-env-2zqkxgnq/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929, 2023-10-04T06:14:33,957 from /tmp/pip-build-env-2zqkxgnq/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-10-04T06:14:33,957 from /tmp/pip-build-env-2zqkxgnq/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-10-04T06:14:33,957 from src/superpang/lib/vtools.c:1176: 2023-10-04T06:14:33,958 /tmp/pip-build-env-2zqkxgnq/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-10-04T06:14:33,958 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-10-04T06:14:33,958 | ^~~~~~~ 2023-10-04T06:14:53,189 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/superpang/lib/vtools.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/superpang/lib/vtools.cpython-39-arm-linux-gnueabihf.so 2023-10-04T06:14:53,357 installing to build/bdist.linux-armv7l/wheel 2023-10-04T06:14:53,357 running install 2023-10-04T06:14:53,383 running install_lib 2023-10-04T06:14:53,389 creating build/bdist.linux-armv7l 2023-10-04T06:14:53,389 creating build/bdist.linux-armv7l/wheel 2023-10-04T06:14:53,390 creating build/bdist.linux-armv7l/wheel/superpang 2023-10-04T06:14:53,391 copying build/lib.linux-armv7l-cpython-39/superpang/VERSION -> build/bdist.linux-armv7l/wheel/superpang 2023-10-04T06:14:53,393 copying build/lib.linux-armv7l-cpython-39/superpang/__init__.py -> build/bdist.linux-armv7l/wheel/superpang 2023-10-04T06:14:53,395 creating build/bdist.linux-armv7l/wheel/superpang/lib 2023-10-04T06:14:53,396 copying build/lib.linux-armv7l-cpython-39/superpang/lib/vtools.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/superpang/lib 2023-10-04T06:14:53,411 copying build/lib.linux-armv7l-cpython-39/superpang/lib/utils.py -> build/bdist.linux-armv7l/wheel/superpang/lib 2023-10-04T06:14:53,414 copying build/lib.linux-armv7l-cpython-39/superpang/lib/Assembler.py -> build/bdist.linux-armv7l/wheel/superpang/lib 2023-10-04T06:14:53,417 copying build/lib.linux-armv7l-cpython-39/superpang/lib/__init__.py -> build/bdist.linux-armv7l/wheel/superpang/lib 2023-10-04T06:14:53,419 copying build/lib.linux-armv7l-cpython-39/superpang/lib/Compressor.pyx -> build/bdist.linux-armv7l/wheel/superpang/lib 2023-10-04T06:14:53,421 copying build/lib.linux-armv7l-cpython-39/superpang/lib/vtools.pyx -> build/bdist.linux-armv7l/wheel/superpang/lib 2023-10-04T06:14:53,423 copying build/lib.linux-armv7l-cpython-39/superpang/lib/cutils.pyx -> build/bdist.linux-armv7l/wheel/superpang/lib 2023-10-04T06:14:53,425 copying build/lib.linux-armv7l-cpython-39/superpang/lib/cutils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/superpang/lib 2023-10-04T06:14:53,442 copying build/lib.linux-armv7l-cpython-39/superpang/lib/Compressor.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/superpang/lib 2023-10-04T06:14:53,466 creating build/bdist.linux-armv7l/wheel/superpang/scripts 2023-10-04T06:14:53,467 copying build/lib.linux-armv7l-cpython-39/superpang/scripts/SuperPang.py -> build/bdist.linux-armv7l/wheel/superpang/scripts 2023-10-04T06:14:53,470 copying build/lib.linux-armv7l-cpython-39/superpang/scripts/condense-edges.py -> build/bdist.linux-armv7l/wheel/superpang/scripts 2023-10-04T06:14:53,472 copying build/lib.linux-armv7l-cpython-39/superpang/scripts/homogenize.py -> build/bdist.linux-armv7l/wheel/superpang/scripts 2023-10-04T06:14:53,474 copying build/lib.linux-armv7l-cpython-39/superpang/scripts/test-SuperPang.py -> build/bdist.linux-armv7l/wheel/superpang/scripts 2023-10-04T06:14:53,476 copying build/lib.linux-armv7l-cpython-39/superpang/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/superpang/scripts 2023-10-04T06:14:53,478 copying build/lib.linux-armv7l-cpython-39/superpang/scripts/test_SuperPang.py -> build/bdist.linux-armv7l/wheel/superpang/scripts 2023-10-04T06:14:53,480 creating build/bdist.linux-armv7l/wheel/superpang/test_data 2023-10-04T06:14:53,481 copying build/lib.linux-armv7l-cpython-39/superpang/test_data/2639762514.fna -> build/bdist.linux-armv7l/wheel/superpang/test_data 2023-10-04T06:14:53,514 copying build/lib.linux-armv7l-cpython-39/superpang/test_data/2636416061.fna -> build/bdist.linux-armv7l/wheel/superpang/test_data 2023-10-04T06:14:53,552 copying build/lib.linux-armv7l-cpython-39/superpang/test_data/2636416036.fna -> build/bdist.linux-armv7l/wheel/superpang/test_data 2023-10-04T06:14:53,587 copying build/lib.linux-armv7l-cpython-39/superpang/test_data/2844342787.fna -> build/bdist.linux-armv7l/wheel/superpang/test_data 2023-10-04T06:14:53,623 copying build/lib.linux-armv7l-cpython-39/superpang/test_data/2639762516.fna -> build/bdist.linux-armv7l/wheel/superpang/test_data 2023-10-04T06:14:53,665 copying build/lib.linux-armv7l-cpython-39/superpang/test_data/2639762515.fna -> build/bdist.linux-armv7l/wheel/superpang/test_data 2023-10-04T06:14:53,700 copying build/lib.linux-armv7l-cpython-39/superpang/test_data/2636416062.fna -> build/bdist.linux-armv7l/wheel/superpang/test_data 2023-10-04T06:14:53,762 copying build/lib.linux-armv7l-cpython-39/superpang/test_data/2639762512.fna -> build/bdist.linux-armv7l/wheel/superpang/test_data 2023-10-04T06:14:53,797 copying build/lib.linux-armv7l-cpython-39/superpang/test_data/2636415981.fna -> build/bdist.linux-armv7l/wheel/superpang/test_data 2023-10-04T06:14:53,840 running install_egg_info 2023-10-04T06:14:53,847 Copying src/SuperPang.egg-info to build/bdist.linux-armv7l/wheel/SuperPang-1.1.0.post3-py3.9.egg-info 2023-10-04T06:14:53,861 running install_scripts 2023-10-04T06:14:53,912 creating build/bdist.linux-armv7l/wheel/SuperPang-1.1.0.post3.dist-info/WHEEL 2023-10-04T06:14:53,915 creating '/tmp/pip-wheel-z9t68fjn/.tmp-p6wy3pj2/SuperPang-1.1.0.post3-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-10-04T06:14:53,919 adding 'superpang/VERSION' 2023-10-04T06:14:53,920 adding 'superpang/__init__.py' 2023-10-04T06:14:53,929 adding 'superpang/lib/Assembler.py' 2023-10-04T06:14:54,170 adding 'superpang/lib/Compressor.cpython-39-arm-linux-gnueabihf.so' 2023-10-04T06:14:54,178 adding 'superpang/lib/Compressor.pyx' 2023-10-04T06:14:54,179 adding 'superpang/lib/__init__.py' 2023-10-04T06:14:54,383 adding 'superpang/lib/cutils.cpython-39-arm-linux-gnueabihf.so' 2023-10-04T06:14:54,391 adding 'superpang/lib/cutils.pyx' 2023-10-04T06:14:54,393 adding 'superpang/lib/utils.py' 2023-10-04T06:14:54,593 adding 'superpang/lib/vtools.cpython-39-arm-linux-gnueabihf.so' 2023-10-04T06:14:54,601 adding 'superpang/lib/vtools.pyx' 2023-10-04T06:14:54,604 adding 'superpang/scripts/SuperPang.py' 2023-10-04T06:14:54,606 adding 'superpang/scripts/__init__.py' 2023-10-04T06:14:54,608 adding 'superpang/scripts/condense-edges.py' 2023-10-04T06:14:54,611 adding 'superpang/scripts/homogenize.py' 2023-10-04T06:14:54,613 adding 'superpang/scripts/test-SuperPang.py' 2023-10-04T06:14:54,614 adding 'superpang/scripts/test_SuperPang.py' 2023-10-04T06:14:55,898 adding 'superpang/test_data/2636415981.fna' 2023-10-04T06:14:57,100 adding 'superpang/test_data/2636416036.fna' 2023-10-04T06:14:58,315 adding 'superpang/test_data/2636416061.fna' 2023-10-04T06:14:59,597 adding 'superpang/test_data/2636416062.fna' 2023-10-04T06:15:00,774 adding 'superpang/test_data/2639762512.fna' 2023-10-04T06:15:01,937 adding 'superpang/test_data/2639762514.fna' 2023-10-04T06:15:03,174 adding 'superpang/test_data/2639762515.fna' 2023-10-04T06:15:04,350 adding 'superpang/test_data/2639762516.fna' 2023-10-04T06:15:05,527 adding 'superpang/test_data/2844342787.fna' 2023-10-04T06:15:05,543 adding 'SuperPang-1.1.0.post3.dist-info/LICENSE' 2023-10-04T06:15:05,545 adding 'SuperPang-1.1.0.post3.dist-info/METADATA' 2023-10-04T06:15:05,546 adding 'SuperPang-1.1.0.post3.dist-info/WHEEL' 2023-10-04T06:15:05,547 adding 'SuperPang-1.1.0.post3.dist-info/entry_points.txt' 2023-10-04T06:15:05,548 adding 'SuperPang-1.1.0.post3.dist-info/top_level.txt' 2023-10-04T06:15:05,550 adding 'SuperPang-1.1.0.post3.dist-info/RECORD' 2023-10-04T06:15:05,638 removing build/bdist.linux-armv7l/wheel 2023-10-04T06:15:06,340 Building wheel for superpang (pyproject.toml): finished with status 'done' 2023-10-04T06:15:06,507 Created wheel for superpang: filename=SuperPang-1.1.0.post3-cp39-cp39-linux_armv7l.whl size=7489097 sha256=5759e339de20c835ff3f7e275838226f957e9a7defea98d071a1b9fabd289a48 2023-10-04T06:15:06,508 Stored in directory: /tmp/pip-ephem-wheel-cache-pwlkif3h/wheels/d3/6e/09/482e465e79f0dcf23c5a074143477cc6a796203c82554ad91e 2023-10-04T06:15:06,523 Successfully built superpang 2023-10-04T06:15:06,715 Removed build tracker: '/tmp/pip-build-tracker-ey_qorjx'