2023-10-04T11:38:40,191 Created temporary directory: /tmp/pip-build-tracker-uy550lm2 2023-10-04T11:38:40,193 Initialized build tracking at /tmp/pip-build-tracker-uy550lm2 2023-10-04T11:38:40,193 Created build tracker: /tmp/pip-build-tracker-uy550lm2 2023-10-04T11:38:40,193 Entered build tracker: /tmp/pip-build-tracker-uy550lm2 2023-10-04T11:38:40,194 Created temporary directory: /tmp/pip-wheel-0s8yxyun 2023-10-04T11:38:40,197 Created temporary directory: /tmp/pip-ephem-wheel-cache-51os5sk8 2023-10-04T11:38:40,219 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-10-04T11:38:40,222 2 location(s) to search for versions of kif: 2023-10-04T11:38:40,222 * https://pypi.org/simple/kif/ 2023-10-04T11:38:40,222 * https://www.piwheels.org/simple/kif/ 2023-10-04T11:38:40,223 Fetching project page and analyzing links: https://pypi.org/simple/kif/ 2023-10-04T11:38:40,224 Getting page https://pypi.org/simple/kif/ 2023-10-04T11:38:40,225 Found index url https://pypi.org/simple/ 2023-10-04T11:38:40,441 Fetched page https://pypi.org/simple/kif/ as application/vnd.pypi.simple.v1+json 2023-10-04T11:38:40,443 Found link https://files.pythonhosted.org/packages/fc/29/40c6e199e847e1d88121eaa5d6c6b7274ea12fdd75a47c30b03c6d2e3db9/KIF-0.1.0.tar.gz (from https://pypi.org/simple/kif/), version: 0.1.0 2023-10-04T11:38:40,444 Found link https://files.pythonhosted.org/packages/12/5e/a18752b1b24dfa0cd677bade2dc34d74c88e064a51b9339f87bda9752819/KIF-0.1.1.tar.gz (from https://pypi.org/simple/kif/), version: 0.1.1 2023-10-04T11:38:40,445 Found link https://files.pythonhosted.org/packages/95/c8/162284e8fd491fbce36aedc42d813b3f7a62e55545a6454d276c8021f775/KIF-0.2.0.tar.gz (from https://pypi.org/simple/kif/), version: 0.2.0 2023-10-04T11:38:40,445 Found link https://files.pythonhosted.org/packages/19/d7/d566fa41ad789953f65ecc5576b298f04ea3ca3e2807c80a233963166a52/KIF-0.3.0.tar.gz (from https://pypi.org/simple/kif/), version: 0.3.0 2023-10-04T11:38:40,446 Found link https://files.pythonhosted.org/packages/13/25/914ed50ee8e20467f25c6aa6b62da274dc06ca0f1bdddc911bca6b8e087b/KIF-0.3.1.tar.gz (from https://pypi.org/simple/kif/), version: 0.3.1 2023-10-04T11:38:40,447 Found link https://files.pythonhosted.org/packages/02/dd/d4b79ac8eb51eca49a256419bf9365398e58b0714e2e442091abb3aa5fc0/KIF-0.3.2.tar.gz (from https://pypi.org/simple/kif/), version: 0.3.2 2023-10-04T11:38:40,447 Found link https://files.pythonhosted.org/packages/49/6c/8d22b81d718d62aeba34c7a18aae9969ea1f285c96c561cf13439d564a35/KIF-0.3.3.tar.gz (from https://pypi.org/simple/kif/), version: 0.3.3 2023-10-04T11:38:40,448 Fetching project page and analyzing links: https://www.piwheels.org/simple/kif/ 2023-10-04T11:38:40,449 Getting page https://www.piwheels.org/simple/kif/ 2023-10-04T11:38:40,451 Found index url https://www.piwheels.org/simple/ 2023-10-04T11:38:40,618 Fetched page https://www.piwheels.org/simple/kif/ as text/html 2023-10-04T11:38:40,622 Skipping link: No binaries permitted for kif: https://www.piwheels.org/simple/kif/KIF-0.3.2-py3-none-any.whl#sha256=9086b6cad9312e7f4a1a32ea82ea8f4a1721049d154b04af84d898a925787c47 (from https://www.piwheels.org/simple/kif/) 2023-10-04T11:38:40,622 Skipping link: No binaries permitted for kif: https://www.piwheels.org/simple/kif/KIF-0.3.1-py3-none-any.whl#sha256=3bd5f637dee09144aca9ee4c4431af6b8d869ae78b2be2e367c70bf7d587ac81 (from https://www.piwheels.org/simple/kif/) 2023-10-04T11:38:40,623 Skipping link: No binaries permitted for kif: https://www.piwheels.org/simple/kif/KIF-0.3.0-py3-none-any.whl#sha256=3f1fa9b9ee4bd30f7fbb37fdfe18974b7e6226e80ef16b04d19a6cf2c050cce0 (from https://www.piwheels.org/simple/kif/) 2023-10-04T11:38:40,623 Skipping link: No binaries permitted for kif: https://www.piwheels.org/simple/kif/KIF-0.2.0-py3-none-any.whl#sha256=b4557357ab0b590617936c58a693c17619dcfeabcf398a6089b971e7de0ea045 (from https://www.piwheels.org/simple/kif/) 2023-10-04T11:38:40,624 Skipping link: No binaries permitted for kif: https://www.piwheels.org/simple/kif/KIF-0.1.1-py3-none-any.whl#sha256=aef9e3b15c62573373d93feab01471bfdb87bccc634fd045cd8fdd24efc6c752 (from https://www.piwheels.org/simple/kif/) 2023-10-04T11:38:40,625 Skipping link: No binaries permitted for kif: https://www.piwheels.org/simple/kif/KIF-0.1.0-py3-none-any.whl#sha256=3457633955b009e632f031fa1c9d1bea0496d13d42fe74053083fbe3d6ba74b6 (from https://www.piwheels.org/simple/kif/) 2023-10-04T11:38:40,625 Skipping link: not a file: https://www.piwheels.org/simple/kif/ 2023-10-04T11:38:40,626 Skipping link: not a file: https://pypi.org/simple/kif/ 2023-10-04T11:38:40,644 Given no hashes to check 1 links for project 'kif': discarding no candidates 2023-10-04T11:38:40,663 Collecting kif==0.3.3 2023-10-04T11:38:40,665 Created temporary directory: /tmp/pip-unpack-8s658z10 2023-10-04T11:38:40,877 Downloading KIF-0.3.3.tar.gz (48 kB) 2023-10-04T11:38:40,972 Added kif==0.3.3 from https://files.pythonhosted.org/packages/49/6c/8d22b81d718d62aeba34c7a18aae9969ea1f285c96c561cf13439d564a35/KIF-0.3.3.tar.gz to build tracker '/tmp/pip-build-tracker-uy550lm2' 2023-10-04T11:38:40,974 Running setup.py (path:/tmp/pip-wheel-0s8yxyun/kif_aa2f868a7a03463fb238693a67fe69c9/setup.py) egg_info for package kif 2023-10-04T11:38:40,974 Created temporary directory: /tmp/pip-pip-egg-info-a3h8zycj 2023-10-04T11:38:40,975 Preparing metadata (setup.py): started 2023-10-04T11:38:40,976 Running command python setup.py egg_info 2023-10-04T11:38:41,990 running egg_info 2023-10-04T11:38:41,991 creating /tmp/pip-pip-egg-info-a3h8zycj/KIF.egg-info 2023-10-04T11:38:42,233 writing /tmp/pip-pip-egg-info-a3h8zycj/KIF.egg-info/PKG-INFO 2023-10-04T11:38:42,236 writing dependency_links to /tmp/pip-pip-egg-info-a3h8zycj/KIF.egg-info/dependency_links.txt 2023-10-04T11:38:42,238 writing requirements to /tmp/pip-pip-egg-info-a3h8zycj/KIF.egg-info/requires.txt 2023-10-04T11:38:42,239 writing top-level names to /tmp/pip-pip-egg-info-a3h8zycj/KIF.egg-info/top_level.txt 2023-10-04T11:38:42,241 writing manifest file '/tmp/pip-pip-egg-info-a3h8zycj/KIF.egg-info/SOURCES.txt' 2023-10-04T11:38:42,322 reading manifest file '/tmp/pip-pip-egg-info-a3h8zycj/KIF.egg-info/SOURCES.txt' 2023-10-04T11:38:42,324 adding license file 'LICENSE.md' 2023-10-04T11:38:42,326 writing manifest file '/tmp/pip-pip-egg-info-a3h8zycj/KIF.egg-info/SOURCES.txt' 2023-10-04T11:38:42,434 Preparing metadata (setup.py): finished with status 'done' 2023-10-04T11:38:42,438 Source in /tmp/pip-wheel-0s8yxyun/kif_aa2f868a7a03463fb238693a67fe69c9 has version 0.3.3, which satisfies requirement kif==0.3.3 from https://files.pythonhosted.org/packages/49/6c/8d22b81d718d62aeba34c7a18aae9969ea1f285c96c561cf13439d564a35/KIF-0.3.3.tar.gz 2023-10-04T11:38:42,439 Removed kif==0.3.3 from https://files.pythonhosted.org/packages/49/6c/8d22b81d718d62aeba34c7a18aae9969ea1f285c96c561cf13439d564a35/KIF-0.3.3.tar.gz from build tracker '/tmp/pip-build-tracker-uy550lm2' 2023-10-04T11:38:42,443 Created temporary directory: /tmp/pip-unpack-eoq4sow3 2023-10-04T11:38:42,444 Created temporary directory: /tmp/pip-unpack-excandih 2023-10-04T11:38:42,455 Building wheels for collected packages: kif 2023-10-04T11:38:42,459 Created temporary directory: /tmp/pip-wheel-5e69f7gy 2023-10-04T11:38:42,459 Building wheel for kif (setup.py): started 2023-10-04T11:38:42,461 Destination directory: /tmp/pip-wheel-5e69f7gy 2023-10-04T11:38:42,461 Running command python setup.py bdist_wheel 2023-10-04T11:38:43,453 running bdist_wheel 2023-10-04T11:38:43,546 running build 2023-10-04T11:38:43,546 running build_py 2023-10-04T11:38:43,573 creating build 2023-10-04T11:38:43,574 creating build/lib 2023-10-04T11:38:43,574 creating build/lib/key_interactions_finder 2023-10-04T11:38:43,576 copying key_interactions_finder/utils.py -> build/lib/key_interactions_finder 2023-10-04T11:38:43,578 copying key_interactions_finder/pycontact_processing.py -> build/lib/key_interactions_finder 2023-10-04T11:38:43,580 copying key_interactions_finder/model_building.py -> build/lib/key_interactions_finder 2023-10-04T11:38:43,584 copying key_interactions_finder/contact_identification.py -> build/lib/key_interactions_finder 2023-10-04T11:38:43,587 copying key_interactions_finder/pymol_projections.py -> build/lib/key_interactions_finder 2023-10-04T11:38:43,591 copying key_interactions_finder/post_proccessing.py -> build/lib/key_interactions_finder 2023-10-04T11:38:43,598 copying key_interactions_finder/network_analysis.py -> build/lib/key_interactions_finder 2023-10-04T11:38:43,606 copying key_interactions_finder/__init__.py -> build/lib/key_interactions_finder 2023-10-04T11:38:43,607 copying key_interactions_finder/stat_modelling.py -> build/lib/key_interactions_finder 2023-10-04T11:38:43,610 copying key_interactions_finder/data_preperation.py -> build/lib/key_interactions_finder 2023-10-04T11:38:43,615 creating build/lib/key_interactions_finder/model_params 2023-10-04T11:38:43,617 copying key_interactions_finder/model_params/gridsearch_quick.json -> build/lib/key_interactions_finder/model_params 2023-10-04T11:38:43,620 copying key_interactions_finder/model_params/gridsearch_exhaustive.json -> build/lib/key_interactions_finder/model_params 2023-10-04T11:38:43,624 copying key_interactions_finder/model_params/gridsearch_moderate.json -> build/lib/key_interactions_finder/model_params 2023-10-04T11:38:43,628 copying key_interactions_finder/model_params/gridsearch_none.json -> build/lib/key_interactions_finder/model_params 2023-10-04T11:38:43,632 copying key_interactions_finder/model_params/gridsearch_custom.json -> build/lib/key_interactions_finder/model_params 2023-10-04T11:38:43,662 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-10-04T11:38:43,662 !! 2023-10-04T11:38:43,663 ******************************************************************************** 2023-10-04T11:38:43,663 Please avoid running ``setup.py`` directly. 2023-10-04T11:38:43,664 Instead, use pypa/build, pypa/installer or other 2023-10-04T11:38:43,664 standards-based tools. 2023-10-04T11:38:43,666 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-10-04T11:38:43,666 ******************************************************************************** 2023-10-04T11:38:43,668 !! 2023-10-04T11:38:43,668 self.initialize_options() 2023-10-04T11:38:43,688 installing to build/bdist.linux-armv7l/wheel 2023-10-04T11:38:43,689 running install 2023-10-04T11:38:43,713 running install_lib 2023-10-04T11:38:43,738 creating build/bdist.linux-armv7l 2023-10-04T11:38:43,738 creating build/bdist.linux-armv7l/wheel 2023-10-04T11:38:43,740 creating build/bdist.linux-armv7l/wheel/key_interactions_finder 2023-10-04T11:38:43,741 copying build/lib/key_interactions_finder/utils.py -> build/bdist.linux-armv7l/wheel/key_interactions_finder 2023-10-04T11:38:43,743 copying build/lib/key_interactions_finder/pycontact_processing.py -> build/bdist.linux-armv7l/wheel/key_interactions_finder 2023-10-04T11:38:43,746 copying build/lib/key_interactions_finder/model_building.py -> build/bdist.linux-armv7l/wheel/key_interactions_finder 2023-10-04T11:38:43,749 copying build/lib/key_interactions_finder/contact_identification.py -> build/bdist.linux-armv7l/wheel/key_interactions_finder 2023-10-04T11:38:43,751 copying build/lib/key_interactions_finder/pymol_projections.py -> build/bdist.linux-armv7l/wheel/key_interactions_finder 2023-10-04T11:38:43,753 copying build/lib/key_interactions_finder/post_proccessing.py -> build/bdist.linux-armv7l/wheel/key_interactions_finder 2023-10-04T11:38:43,756 copying build/lib/key_interactions_finder/network_analysis.py -> build/bdist.linux-armv7l/wheel/key_interactions_finder 2023-10-04T11:38:43,759 copying build/lib/key_interactions_finder/__init__.py -> build/bdist.linux-armv7l/wheel/key_interactions_finder 2023-10-04T11:38:43,760 copying build/lib/key_interactions_finder/stat_modelling.py -> build/bdist.linux-armv7l/wheel/key_interactions_finder 2023-10-04T11:38:43,763 creating build/bdist.linux-armv7l/wheel/key_interactions_finder/model_params 2023-10-04T11:38:43,764 copying build/lib/key_interactions_finder/model_params/gridsearch_quick.json -> build/bdist.linux-armv7l/wheel/key_interactions_finder/model_params 2023-10-04T11:38:43,766 copying build/lib/key_interactions_finder/model_params/gridsearch_exhaustive.json -> build/bdist.linux-armv7l/wheel/key_interactions_finder/model_params 2023-10-04T11:38:43,768 copying build/lib/key_interactions_finder/model_params/gridsearch_moderate.json -> build/bdist.linux-armv7l/wheel/key_interactions_finder/model_params 2023-10-04T11:38:43,770 copying build/lib/key_interactions_finder/model_params/gridsearch_none.json -> build/bdist.linux-armv7l/wheel/key_interactions_finder/model_params 2023-10-04T11:38:43,772 copying build/lib/key_interactions_finder/model_params/gridsearch_custom.json -> build/bdist.linux-armv7l/wheel/key_interactions_finder/model_params 2023-10-04T11:38:43,773 copying build/lib/key_interactions_finder/data_preperation.py -> build/bdist.linux-armv7l/wheel/key_interactions_finder 2023-10-04T11:38:43,775 running install_egg_info 2023-10-04T11:38:43,838 running egg_info 2023-10-04T11:38:43,863 writing KIF.egg-info/PKG-INFO 2023-10-04T11:38:43,866 writing dependency_links to KIF.egg-info/dependency_links.txt 2023-10-04T11:38:43,868 writing requirements to KIF.egg-info/requires.txt 2023-10-04T11:38:43,869 writing top-level names to KIF.egg-info/top_level.txt 2023-10-04T11:38:43,896 reading manifest file 'KIF.egg-info/SOURCES.txt' 2023-10-04T11:38:43,898 adding license file 'LICENSE.md' 2023-10-04T11:38:43,900 writing manifest file 'KIF.egg-info/SOURCES.txt' 2023-10-04T11:38:43,902 Copying KIF.egg-info to build/bdist.linux-armv7l/wheel/KIF-0.3.3-py3.11.egg-info 2023-10-04T11:38:43,911 running install_scripts 2023-10-04T11:38:43,928 creating build/bdist.linux-armv7l/wheel/KIF-0.3.3.dist-info/WHEEL 2023-10-04T11:38:43,931 creating '/tmp/pip-wheel-5e69f7gy/KIF-0.3.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-10-04T11:38:43,934 adding 'key_interactions_finder/__init__.py' 2023-10-04T11:38:43,936 adding 'key_interactions_finder/contact_identification.py' 2023-10-04T11:38:43,938 adding 'key_interactions_finder/data_preperation.py' 2023-10-04T11:38:43,942 adding 'key_interactions_finder/model_building.py' 2023-10-04T11:38:43,944 adding 'key_interactions_finder/network_analysis.py' 2023-10-04T11:38:43,948 adding 'key_interactions_finder/post_proccessing.py' 2023-10-04T11:38:43,951 adding 'key_interactions_finder/pycontact_processing.py' 2023-10-04T11:38:43,953 adding 'key_interactions_finder/pymol_projections.py' 2023-10-04T11:38:43,955 adding 'key_interactions_finder/stat_modelling.py' 2023-10-04T11:38:43,957 adding 'key_interactions_finder/utils.py' 2023-10-04T11:38:43,959 adding 'key_interactions_finder/model_params/gridsearch_custom.json' 2023-10-04T11:38:43,960 adding 'key_interactions_finder/model_params/gridsearch_exhaustive.json' 2023-10-04T11:38:43,961 adding 'key_interactions_finder/model_params/gridsearch_moderate.json' 2023-10-04T11:38:43,962 adding 'key_interactions_finder/model_params/gridsearch_none.json' 2023-10-04T11:38:43,964 adding 'key_interactions_finder/model_params/gridsearch_quick.json' 2023-10-04T11:38:43,967 adding 'KIF-0.3.3.dist-info/LICENSE.md' 2023-10-04T11:38:43,968 adding 'KIF-0.3.3.dist-info/METADATA' 2023-10-04T11:38:43,969 adding 'KIF-0.3.3.dist-info/WHEEL' 2023-10-04T11:38:43,970 adding 'KIF-0.3.3.dist-info/top_level.txt' 2023-10-04T11:38:43,971 adding 'KIF-0.3.3.dist-info/RECORD' 2023-10-04T11:38:43,973 removing build/bdist.linux-armv7l/wheel 2023-10-04T11:38:44,094 Building wheel for kif (setup.py): finished with status 'done' 2023-10-04T11:38:44,097 Created wheel for kif: filename=KIF-0.3.3-py3-none-any.whl size=51928 sha256=9e1c497d27cd3795b218c334004102a7cb2f84195da46d0bb28731b576e9cd05 2023-10-04T11:38:44,098 Stored in directory: /tmp/pip-ephem-wheel-cache-51os5sk8/wheels/e0/53/2b/5089470c1bc2bbe2ec726660fb40143b03a207f8819eb3d3e4 2023-10-04T11:38:44,108 Successfully built kif 2023-10-04T11:38:44,113 Removed build tracker: '/tmp/pip-build-tracker-uy550lm2'