2023-10-05T19:33:41,492 Created temporary directory: /tmp/pip-build-tracker-ge6h2c2t 2023-10-05T19:33:41,493 Initialized build tracking at /tmp/pip-build-tracker-ge6h2c2t 2023-10-05T19:33:41,493 Created build tracker: /tmp/pip-build-tracker-ge6h2c2t 2023-10-05T19:33:41,494 Entered build tracker: /tmp/pip-build-tracker-ge6h2c2t 2023-10-05T19:33:41,495 Created temporary directory: /tmp/pip-wheel-igtq2sz0 2023-10-05T19:33:41,498 Created temporary directory: /tmp/pip-ephem-wheel-cache-z4hh7x1x 2023-10-05T19:33:41,523 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-10-05T19:33:41,527 2 location(s) to search for versions of commonnexus: 2023-10-05T19:33:41,527 * https://pypi.org/simple/commonnexus/ 2023-10-05T19:33:41,527 * https://www.piwheels.org/simple/commonnexus/ 2023-10-05T19:33:41,527 Fetching project page and analyzing links: https://pypi.org/simple/commonnexus/ 2023-10-05T19:33:41,528 Getting page https://pypi.org/simple/commonnexus/ 2023-10-05T19:33:41,530 Found index url https://pypi.org/simple/ 2023-10-05T19:33:41,750 Fetched page https://pypi.org/simple/commonnexus/ as application/vnd.pypi.simple.v1+json 2023-10-05T19:33:41,754 Skipping link: No binaries permitted for commonnexus: https://files.pythonhosted.org/packages/6f/ad/24af8677ef5f7485edfc90bdb2c305ac9d135c9632084d779ff339296df0/commonnexus-0.1.0-py2.py3-none-any.whl (from https://pypi.org/simple/commonnexus/) (requires-python:>=3.7) 2023-10-05T19:33:41,755 Found link https://files.pythonhosted.org/packages/ce/52/0e2b4d935815359ea631e461dc5b747f67e82e397c1e8af57685ff878d56/commonnexus-0.1.0.tar.gz (from https://pypi.org/simple/commonnexus/) (requires-python:>=3.7), version: 0.1.0 2023-10-05T19:33:41,756 Skipping link: No binaries permitted for commonnexus: https://files.pythonhosted.org/packages/b5/f8/e2407b5701f90cec830a3dd34004985a4a5e5d27c0197b9c72ece27c00e5/commonnexus-1.0.0-py2.py3-none-any.whl (from https://pypi.org/simple/commonnexus/) (requires-python:>=3.7) 2023-10-05T19:33:41,757 Found link https://files.pythonhosted.org/packages/9a/50/7733580336e4d3a01a03be36e105881a12b73c1a06cadfd35d2ff566fb6e/commonnexus-1.0.0.tar.gz (from https://pypi.org/simple/commonnexus/) (requires-python:>=3.7), version: 1.0.0 2023-10-05T19:33:41,757 Skipping link: No binaries permitted for commonnexus: https://files.pythonhosted.org/packages/58/87/518ddd146b3bd4f24bf0ffd7a21e5fba4e744d2fc1cbdfb97196092aa943/commonnexus-1.1.0-py2.py3-none-any.whl (from https://pypi.org/simple/commonnexus/) (requires-python:>=3.7) 2023-10-05T19:33:41,758 Found link https://files.pythonhosted.org/packages/42/71/d7e685949b037d4f1d95d4717f6245e6d2b77fa50c4a61e365f309a4f047/commonnexus-1.1.0.tar.gz (from https://pypi.org/simple/commonnexus/) (requires-python:>=3.7), version: 1.1.0 2023-10-05T19:33:41,759 Skipping link: No binaries permitted for commonnexus: https://files.pythonhosted.org/packages/95/d2/985821ba2cc4c487ddd360884f165a5450d4d8b7ee25bed80f2852311669/commonnexus-1.2.0-py2.py3-none-any.whl (from https://pypi.org/simple/commonnexus/) (requires-python:>=3.7) 2023-10-05T19:33:41,760 Found link https://files.pythonhosted.org/packages/02/b4/b87997e1aaebbabd37dbe7f7cc5d387c5840ec3131ee21cc7a170f80d697/commonnexus-1.2.0.tar.gz (from https://pypi.org/simple/commonnexus/) (requires-python:>=3.7), version: 1.2.0 2023-10-05T19:33:41,761 Skipping link: No binaries permitted for commonnexus: https://files.pythonhosted.org/packages/2e/8a/ff617ca58435f3ca76bd48235384f359523f8c44977b26db4fc373bfc740/commonnexus-1.3.0-py2.py3-none-any.whl (from https://pypi.org/simple/commonnexus/) (requires-python:>=3.7) 2023-10-05T19:33:41,761 Found link https://files.pythonhosted.org/packages/5d/fd/c550965c8988d2c9235206e4318608e05dcce017eaa8d53bb4a7fd15d5d8/commonnexus-1.3.0.tar.gz (from https://pypi.org/simple/commonnexus/) (requires-python:>=3.7), version: 1.3.0 2023-10-05T19:33:41,762 Skipping link: No binaries permitted for commonnexus: https://files.pythonhosted.org/packages/a5/a2/55c7f31de82c38bd35a4979f5f42743101b162602ff3e5431d7d571b3089/commonnexus-1.4.0-py2.py3-none-any.whl (from https://pypi.org/simple/commonnexus/) (requires-python:>=3.8) 2023-10-05T19:33:41,763 Found link https://files.pythonhosted.org/packages/de/75/4cb54fd327ab2be5edfbc009808c1fcbaf7716120fbbed9378548f005f2f/commonnexus-1.4.0.tar.gz (from https://pypi.org/simple/commonnexus/) (requires-python:>=3.8), version: 1.4.0 2023-10-05T19:33:41,764 Skipping link: No binaries permitted for commonnexus: https://files.pythonhosted.org/packages/47/68/bf69404bfa0d973256c4a4164d1110396a25891957d22cd3a3891d6a1e5f/commonnexus-1.5.0-py2.py3-none-any.whl (from https://pypi.org/simple/commonnexus/) (requires-python:>=3.8) 2023-10-05T19:33:41,765 Found link https://files.pythonhosted.org/packages/f6/48/fdfce101845d01a74fb2e3d192417b6f3016e2ffb72c25b61ec888e80236/commonnexus-1.5.0.tar.gz (from https://pypi.org/simple/commonnexus/) (requires-python:>=3.8), version: 1.5.0 2023-10-05T19:33:41,765 Skipping link: No binaries permitted for commonnexus: https://files.pythonhosted.org/packages/85/90/39b12bf3573204dbe0e3f8f706f0913dde2ff49e4e09d2846d7f729f8a97/commonnexus-1.6.0-py2.py3-none-any.whl (from https://pypi.org/simple/commonnexus/) (requires-python:>=3.8) 2023-10-05T19:33:41,766 Found link https://files.pythonhosted.org/packages/44/63/b529c5c9abfc1468c90c601f33089114e640fbc2b8930cafa1a11e38d003/commonnexus-1.6.0.tar.gz (from https://pypi.org/simple/commonnexus/) (requires-python:>=3.8), version: 1.6.0 2023-10-05T19:33:41,767 Skipping link: No binaries permitted for commonnexus: https://files.pythonhosted.org/packages/f3/bf/f2c42b06a145cf6caee8ce29514a4c0d29afc9f82943be27b2144a9518c2/commonnexus-1.6.1-py2.py3-none-any.whl (from https://pypi.org/simple/commonnexus/) (requires-python:>=3.8) 2023-10-05T19:33:41,768 Found link https://files.pythonhosted.org/packages/0b/c6/1de77c05059d6e79d521583ecb877039972472a09ed1580a6d78f2b8c7e5/commonnexus-1.6.1.tar.gz (from https://pypi.org/simple/commonnexus/) (requires-python:>=3.8), version: 1.6.1 2023-10-05T19:33:41,768 Fetching project page and analyzing links: https://www.piwheels.org/simple/commonnexus/ 2023-10-05T19:33:41,769 Getting page https://www.piwheels.org/simple/commonnexus/ 2023-10-05T19:33:41,770 Found index url https://www.piwheels.org/simple/ 2023-10-05T19:33:41,934 Fetched page https://www.piwheels.org/simple/commonnexus/ as text/html 2023-10-05T19:33:41,938 Skipping link: No binaries permitted for commonnexus: https://www.piwheels.org/simple/commonnexus/commonnexus-1.6.0-py2.py3-none-any.whl#sha256=bccc29496c2a895d9f4ba1cfb29185bb70265f360a5965cf497079dd63c1c239 (from https://www.piwheels.org/simple/commonnexus/) (requires-python:>=3.8) 2023-10-05T19:33:41,938 Skipping link: No binaries permitted for commonnexus: https://www.piwheels.org/simple/commonnexus/commonnexus-1.5.0-py2.py3-none-any.whl#sha256=0abbe3973e3b2876fae3a4975f1b62ee03a645225d7c0caf3c3f8d4a88603cf6 (from https://www.piwheels.org/simple/commonnexus/) (requires-python:>=3.8) 2023-10-05T19:33:41,939 Skipping link: No binaries permitted for commonnexus: https://www.piwheels.org/simple/commonnexus/commonnexus-1.4.0-py2.py3-none-any.whl#sha256=cc7001f175ae3e076d0b6ee7f8328edfbe9d5541898133e6517242c8acc3512e (from https://www.piwheels.org/simple/commonnexus/) (requires-python:>=3.8) 2023-10-05T19:33:41,940 Skipping link: No binaries permitted for commonnexus: https://www.piwheels.org/simple/commonnexus/commonnexus-1.3.0-py2.py3-none-any.whl#sha256=2f5614ffc88cdfa549ebc24d7b10484a6cbf608f4521f4c8fc59d7e04470bcb3 (from https://www.piwheels.org/simple/commonnexus/) (requires-python:>=3.7) 2023-10-05T19:33:41,940 Skipping link: No binaries permitted for commonnexus: https://www.piwheels.org/simple/commonnexus/commonnexus-1.2.0-py2.py3-none-any.whl#sha256=5e2ebfee3f3ff980956666c872e104769ca5c7d99b9a9d0fea91c2def10a34cc (from https://www.piwheels.org/simple/commonnexus/) (requires-python:>=3.7) 2023-10-05T19:33:41,941 Skipping link: No binaries permitted for commonnexus: https://www.piwheels.org/simple/commonnexus/commonnexus-1.1.0-py2.py3-none-any.whl#sha256=3ba27bb0f17bf2fb6199de21e114255afd83c2612e36bef9918e7dfb4701c116 (from https://www.piwheels.org/simple/commonnexus/) (requires-python:>=3.7) 2023-10-05T19:33:41,941 Skipping link: No binaries permitted for commonnexus: https://www.piwheels.org/simple/commonnexus/commonnexus-1.0.0-py2.py3-none-any.whl#sha256=b42cac297c488b91c998df840da85ff45d156b1d3c5416476689c187a55999e3 (from https://www.piwheels.org/simple/commonnexus/) (requires-python:>=3.7) 2023-10-05T19:33:41,942 Skipping link: No binaries permitted for commonnexus: https://www.piwheels.org/simple/commonnexus/commonnexus-0.1.0-py2.py3-none-any.whl#sha256=b1998a701efec9a50e57af788d4413d67c3bceeff0f3c02a6bc4cf78d25796e5 (from https://www.piwheels.org/simple/commonnexus/) (requires-python:>=3.7) 2023-10-05T19:33:41,942 Skipping link: not a file: https://www.piwheels.org/simple/commonnexus/ 2023-10-05T19:33:41,943 Skipping link: not a file: https://pypi.org/simple/commonnexus/ 2023-10-05T19:33:41,963 Given no hashes to check 1 links for project 'commonnexus': discarding no candidates 2023-10-05T19:33:41,983 Collecting commonnexus==1.6.1 2023-10-05T19:33:41,985 Created temporary directory: /tmp/pip-unpack-s18q_l44 2023-10-05T19:33:42,202 Downloading commonnexus-1.6.1.tar.gz (69 kB) 2023-10-05T19:33:42,338 Added commonnexus==1.6.1 from https://files.pythonhosted.org/packages/0b/c6/1de77c05059d6e79d521583ecb877039972472a09ed1580a6d78f2b8c7e5/commonnexus-1.6.1.tar.gz to build tracker '/tmp/pip-build-tracker-ge6h2c2t' 2023-10-05T19:33:42,340 Running setup.py (path:/tmp/pip-wheel-igtq2sz0/commonnexus_b0430fa8778a42058350097f8017ad00/setup.py) egg_info for package commonnexus 2023-10-05T19:33:42,341 Created temporary directory: /tmp/pip-pip-egg-info-r7hqnp8j 2023-10-05T19:33:42,341 Preparing metadata (setup.py): started 2023-10-05T19:33:42,343 Running command python setup.py egg_info 2023-10-05T19:33:43,587 running egg_info 2023-10-05T19:33:43,589 creating /tmp/pip-pip-egg-info-r7hqnp8j/commonnexus.egg-info 2023-10-05T19:33:43,614 writing /tmp/pip-pip-egg-info-r7hqnp8j/commonnexus.egg-info/PKG-INFO 2023-10-05T19:33:43,623 writing dependency_links to /tmp/pip-pip-egg-info-r7hqnp8j/commonnexus.egg-info/dependency_links.txt 2023-10-05T19:33:43,624 writing entry points to /tmp/pip-pip-egg-info-r7hqnp8j/commonnexus.egg-info/entry_points.txt 2023-10-05T19:33:43,628 writing requirements to /tmp/pip-pip-egg-info-r7hqnp8j/commonnexus.egg-info/requires.txt 2023-10-05T19:33:43,629 writing top-level names to /tmp/pip-pip-egg-info-r7hqnp8j/commonnexus.egg-info/top_level.txt 2023-10-05T19:33:43,631 writing manifest file '/tmp/pip-pip-egg-info-r7hqnp8j/commonnexus.egg-info/SOURCES.txt' 2023-10-05T19:33:43,711 reading manifest file '/tmp/pip-pip-egg-info-r7hqnp8j/commonnexus.egg-info/SOURCES.txt' 2023-10-05T19:33:43,713 adding license file 'LICENSE' 2023-10-05T19:33:43,715 writing manifest file '/tmp/pip-pip-egg-info-r7hqnp8j/commonnexus.egg-info/SOURCES.txt' 2023-10-05T19:33:43,828 Preparing metadata (setup.py): finished with status 'done' 2023-10-05T19:33:43,832 Source in /tmp/pip-wheel-igtq2sz0/commonnexus_b0430fa8778a42058350097f8017ad00 has version 1.6.1, which satisfies requirement commonnexus==1.6.1 from https://files.pythonhosted.org/packages/0b/c6/1de77c05059d6e79d521583ecb877039972472a09ed1580a6d78f2b8c7e5/commonnexus-1.6.1.tar.gz 2023-10-05T19:33:43,833 Removed commonnexus==1.6.1 from https://files.pythonhosted.org/packages/0b/c6/1de77c05059d6e79d521583ecb877039972472a09ed1580a6d78f2b8c7e5/commonnexus-1.6.1.tar.gz from build tracker '/tmp/pip-build-tracker-ge6h2c2t' 2023-10-05T19:33:43,839 Created temporary directory: /tmp/pip-unpack-9gkaqzms 2023-10-05T19:33:43,841 Created temporary directory: /tmp/pip-unpack-f9qtk2sg 2023-10-05T19:33:43,888 Building wheels for collected packages: commonnexus 2023-10-05T19:33:43,892 Created temporary directory: /tmp/pip-wheel-6c4epwq8 2023-10-05T19:33:43,892 Building wheel for commonnexus (setup.py): started 2023-10-05T19:33:43,894 Destination directory: /tmp/pip-wheel-6c4epwq8 2023-10-05T19:33:43,894 Running command python setup.py bdist_wheel 2023-10-05T19:33:45,064 running bdist_wheel 2023-10-05T19:33:45,192 running build 2023-10-05T19:33:45,193 running build_py 2023-10-05T19:33:45,220 creating build 2023-10-05T19:33:45,220 creating build/lib 2023-10-05T19:33:45,221 creating build/lib/commonnexus 2023-10-05T19:33:45,222 copying src/commonnexus/__main__.py -> build/lib/commonnexus 2023-10-05T19:33:45,224 copying src/commonnexus/__init__.py -> build/lib/commonnexus 2023-10-05T19:33:45,226 copying src/commonnexus/command.py -> build/lib/commonnexus 2023-10-05T19:33:45,228 copying src/commonnexus/cli_util.py -> build/lib/commonnexus 2023-10-05T19:33:45,229 copying src/commonnexus/tokenizer.py -> build/lib/commonnexus 2023-10-05T19:33:45,231 copying src/commonnexus/util.py -> build/lib/commonnexus 2023-10-05T19:33:45,233 copying src/commonnexus/nexus.py -> build/lib/commonnexus 2023-10-05T19:33:45,235 creating build/lib/commonnexus/commands 2023-10-05T19:33:45,236 copying src/commonnexus/commands/normalise.py -> build/lib/commonnexus/commands 2023-10-05T19:33:45,238 copying src/commonnexus/commands/__init__.py -> build/lib/commonnexus/commands 2023-10-05T19:33:45,239 copying src/commonnexus/commands/characters.py -> build/lib/commonnexus/commands 2023-10-05T19:33:45,241 copying src/commonnexus/commands/help.py -> build/lib/commonnexus/commands 2023-10-05T19:33:45,243 copying src/commonnexus/commands/split.py -> build/lib/commonnexus/commands 2023-10-05T19:33:45,244 copying src/commonnexus/commands/trees.py -> build/lib/commonnexus/commands 2023-10-05T19:33:45,246 copying src/commonnexus/commands/combine.py -> build/lib/commonnexus/commands 2023-10-05T19:33:45,248 copying src/commonnexus/commands/taxa.py -> build/lib/commonnexus/commands 2023-10-05T19:33:45,250 creating build/lib/commonnexus/blocks 2023-10-05T19:33:45,251 copying src/commonnexus/blocks/assumptions.py -> build/lib/commonnexus/blocks 2023-10-05T19:33:45,253 copying src/commonnexus/blocks/__init__.py -> build/lib/commonnexus/blocks 2023-10-05T19:33:45,255 copying src/commonnexus/blocks/characters.py -> build/lib/commonnexus/blocks 2023-10-05T19:33:45,258 copying src/commonnexus/blocks/sets.py -> build/lib/commonnexus/blocks 2023-10-05T19:33:45,260 copying src/commonnexus/blocks/notes.py -> build/lib/commonnexus/blocks 2023-10-05T19:33:45,262 copying src/commonnexus/blocks/codons.py -> build/lib/commonnexus/blocks 2023-10-05T19:33:45,264 copying src/commonnexus/blocks/distances.py -> build/lib/commonnexus/blocks 2023-10-05T19:33:45,266 copying src/commonnexus/blocks/trees.py -> build/lib/commonnexus/blocks 2023-10-05T19:33:45,268 copying src/commonnexus/blocks/base.py -> build/lib/commonnexus/blocks 2023-10-05T19:33:45,270 copying src/commonnexus/blocks/unaligned.py -> build/lib/commonnexus/blocks 2023-10-05T19:33:45,272 copying src/commonnexus/blocks/taxa.py -> build/lib/commonnexus/blocks 2023-10-05T19:33:45,274 creating build/lib/commonnexus/tools 2023-10-05T19:33:45,275 copying src/commonnexus/tools/normalise.py -> build/lib/commonnexus/tools 2023-10-05T19:33:45,277 copying src/commonnexus/tools/__init__.py -> build/lib/commonnexus/tools 2023-10-05T19:33:45,279 copying src/commonnexus/tools/matrix.py -> build/lib/commonnexus/tools 2023-10-05T19:33:45,281 copying src/commonnexus/tools/combine.py -> build/lib/commonnexus/tools 2023-10-05T19:33:45,309 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-10-05T19:33:45,310 !! 2023-10-05T19:33:45,311 ******************************************************************************** 2023-10-05T19:33:45,311 Please avoid running ``setup.py`` directly. 2023-10-05T19:33:45,312 Instead, use pypa/build, pypa/installer or other 2023-10-05T19:33:45,313 standards-based tools. 2023-10-05T19:33:45,314 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-10-05T19:33:45,314 ******************************************************************************** 2023-10-05T19:33:45,315 !! 2023-10-05T19:33:45,316 self.initialize_options() 2023-10-05T19:33:45,335 installing to build/bdist.linux-armv7l/wheel 2023-10-05T19:33:45,336 running install 2023-10-05T19:33:45,360 running install_lib 2023-10-05T19:33:45,384 creating build/bdist.linux-armv7l 2023-10-05T19:33:45,385 creating build/bdist.linux-armv7l/wheel 2023-10-05T19:33:45,386 creating build/bdist.linux-armv7l/wheel/commonnexus 2023-10-05T19:33:45,387 creating build/bdist.linux-armv7l/wheel/commonnexus/commands 2023-10-05T19:33:45,388 copying build/lib/commonnexus/commands/normalise.py -> build/bdist.linux-armv7l/wheel/commonnexus/commands 2023-10-05T19:33:45,390 copying build/lib/commonnexus/commands/__init__.py -> build/bdist.linux-armv7l/wheel/commonnexus/commands 2023-10-05T19:33:45,391 copying build/lib/commonnexus/commands/characters.py -> build/bdist.linux-armv7l/wheel/commonnexus/commands 2023-10-05T19:33:45,393 copying build/lib/commonnexus/commands/help.py -> build/bdist.linux-armv7l/wheel/commonnexus/commands 2023-10-05T19:33:45,395 copying build/lib/commonnexus/commands/split.py -> build/bdist.linux-armv7l/wheel/commonnexus/commands 2023-10-05T19:33:45,396 copying build/lib/commonnexus/commands/trees.py -> build/bdist.linux-armv7l/wheel/commonnexus/commands 2023-10-05T19:33:45,398 copying build/lib/commonnexus/commands/combine.py -> build/bdist.linux-armv7l/wheel/commonnexus/commands 2023-10-05T19:33:45,400 copying build/lib/commonnexus/commands/taxa.py -> build/bdist.linux-armv7l/wheel/commonnexus/commands 2023-10-05T19:33:45,402 copying build/lib/commonnexus/__main__.py -> build/bdist.linux-armv7l/wheel/commonnexus 2023-10-05T19:33:45,404 creating build/bdist.linux-armv7l/wheel/commonnexus/blocks 2023-10-05T19:33:45,405 copying build/lib/commonnexus/blocks/assumptions.py -> build/bdist.linux-armv7l/wheel/commonnexus/blocks 2023-10-05T19:33:45,408 copying build/lib/commonnexus/blocks/__init__.py -> build/bdist.linux-armv7l/wheel/commonnexus/blocks 2023-10-05T19:33:45,409 copying build/lib/commonnexus/blocks/characters.py -> build/bdist.linux-armv7l/wheel/commonnexus/blocks 2023-10-05T19:33:45,413 copying build/lib/commonnexus/blocks/sets.py -> build/bdist.linux-armv7l/wheel/commonnexus/blocks 2023-10-05T19:33:45,415 copying build/lib/commonnexus/blocks/notes.py -> build/bdist.linux-armv7l/wheel/commonnexus/blocks 2023-10-05T19:33:45,417 copying build/lib/commonnexus/blocks/codons.py -> build/bdist.linux-armv7l/wheel/commonnexus/blocks 2023-10-05T19:33:45,419 copying build/lib/commonnexus/blocks/distances.py -> build/bdist.linux-armv7l/wheel/commonnexus/blocks 2023-10-05T19:33:45,421 copying build/lib/commonnexus/blocks/trees.py -> build/bdist.linux-armv7l/wheel/commonnexus/blocks 2023-10-05T19:33:45,424 copying build/lib/commonnexus/blocks/base.py -> build/bdist.linux-armv7l/wheel/commonnexus/blocks 2023-10-05T19:33:45,426 copying build/lib/commonnexus/blocks/unaligned.py -> build/bdist.linux-armv7l/wheel/commonnexus/blocks 2023-10-05T19:33:45,428 copying build/lib/commonnexus/blocks/taxa.py -> build/bdist.linux-armv7l/wheel/commonnexus/blocks 2023-10-05T19:33:45,429 copying build/lib/commonnexus/__init__.py -> build/bdist.linux-armv7l/wheel/commonnexus 2023-10-05T19:33:45,431 copying build/lib/commonnexus/command.py -> build/bdist.linux-armv7l/wheel/commonnexus 2023-10-05T19:33:45,433 copying build/lib/commonnexus/cli_util.py -> build/bdist.linux-armv7l/wheel/commonnexus 2023-10-05T19:33:45,435 copying build/lib/commonnexus/tokenizer.py -> build/bdist.linux-armv7l/wheel/commonnexus 2023-10-05T19:33:45,437 copying build/lib/commonnexus/util.py -> build/bdist.linux-armv7l/wheel/commonnexus 2023-10-05T19:33:45,440 creating build/bdist.linux-armv7l/wheel/commonnexus/tools 2023-10-05T19:33:45,441 copying build/lib/commonnexus/tools/normalise.py -> build/bdist.linux-armv7l/wheel/commonnexus/tools 2023-10-05T19:33:45,443 copying build/lib/commonnexus/tools/__init__.py -> build/bdist.linux-armv7l/wheel/commonnexus/tools 2023-10-05T19:33:45,445 copying build/lib/commonnexus/tools/matrix.py -> build/bdist.linux-armv7l/wheel/commonnexus/tools 2023-10-05T19:33:45,447 copying build/lib/commonnexus/tools/combine.py -> build/bdist.linux-armv7l/wheel/commonnexus/tools 2023-10-05T19:33:45,449 copying build/lib/commonnexus/nexus.py -> build/bdist.linux-armv7l/wheel/commonnexus 2023-10-05T19:33:45,451 running install_egg_info 2023-10-05T19:33:45,482 running egg_info 2023-10-05T19:33:45,506 writing src/commonnexus.egg-info/PKG-INFO 2023-10-05T19:33:45,514 writing dependency_links to src/commonnexus.egg-info/dependency_links.txt 2023-10-05T19:33:45,516 writing entry points to src/commonnexus.egg-info/entry_points.txt 2023-10-05T19:33:45,520 writing requirements to src/commonnexus.egg-info/requires.txt 2023-10-05T19:33:45,521 writing top-level names to src/commonnexus.egg-info/top_level.txt 2023-10-05T19:33:45,549 reading manifest file 'src/commonnexus.egg-info/SOURCES.txt' 2023-10-05T19:33:45,551 adding license file 'LICENSE' 2023-10-05T19:33:45,554 writing manifest file 'src/commonnexus.egg-info/SOURCES.txt' 2023-10-05T19:33:45,555 Copying src/commonnexus.egg-info to build/bdist.linux-armv7l/wheel/commonnexus-1.6.1-py3.11.egg-info 2023-10-05T19:33:45,568 running install_scripts 2023-10-05T19:33:45,587 creating build/bdist.linux-armv7l/wheel/commonnexus-1.6.1.dist-info/WHEEL 2023-10-05T19:33:45,589 creating '/tmp/pip-wheel-6c4epwq8/commonnexus-1.6.1-py2.py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-10-05T19:33:45,592 adding 'commonnexus/__init__.py' 2023-10-05T19:33:45,593 adding 'commonnexus/__main__.py' 2023-10-05T19:33:45,595 adding 'commonnexus/cli_util.py' 2023-10-05T19:33:45,596 adding 'commonnexus/command.py' 2023-10-05T19:33:45,599 adding 'commonnexus/nexus.py' 2023-10-05T19:33:45,601 adding 'commonnexus/tokenizer.py' 2023-10-05T19:33:45,602 adding 'commonnexus/util.py' 2023-10-05T19:33:45,604 adding 'commonnexus/blocks/__init__.py' 2023-10-05T19:33:45,606 adding 'commonnexus/blocks/assumptions.py' 2023-10-05T19:33:45,608 adding 'commonnexus/blocks/base.py' 2023-10-05T19:33:45,615 adding 'commonnexus/blocks/characters.py' 2023-10-05T19:33:45,618 adding 'commonnexus/blocks/codons.py' 2023-10-05T19:33:45,620 adding 'commonnexus/blocks/distances.py' 2023-10-05T19:33:45,622 adding 'commonnexus/blocks/notes.py' 2023-10-05T19:33:45,624 adding 'commonnexus/blocks/sets.py' 2023-10-05T19:33:45,625 adding 'commonnexus/blocks/taxa.py' 2023-10-05T19:33:45,628 adding 'commonnexus/blocks/trees.py' 2023-10-05T19:33:45,629 adding 'commonnexus/blocks/unaligned.py' 2023-10-05T19:33:45,631 adding 'commonnexus/commands/__init__.py' 2023-10-05T19:33:45,632 adding 'commonnexus/commands/characters.py' 2023-10-05T19:33:45,634 adding 'commonnexus/commands/combine.py' 2023-10-05T19:33:45,635 adding 'commonnexus/commands/help.py' 2023-10-05T19:33:45,636 adding 'commonnexus/commands/normalise.py' 2023-10-05T19:33:45,638 adding 'commonnexus/commands/split.py' 2023-10-05T19:33:45,640 adding 'commonnexus/commands/taxa.py' 2023-10-05T19:33:45,641 adding 'commonnexus/commands/trees.py' 2023-10-05T19:33:45,643 adding 'commonnexus/tools/__init__.py' 2023-10-05T19:33:45,644 adding 'commonnexus/tools/combine.py' 2023-10-05T19:33:45,646 adding 'commonnexus/tools/matrix.py' 2023-10-05T19:33:45,648 adding 'commonnexus/tools/normalise.py' 2023-10-05T19:33:45,651 adding 'commonnexus-1.6.1.dist-info/LICENSE' 2023-10-05T19:33:45,652 adding 'commonnexus-1.6.1.dist-info/METADATA' 2023-10-05T19:33:45,653 adding 'commonnexus-1.6.1.dist-info/WHEEL' 2023-10-05T19:33:45,654 adding 'commonnexus-1.6.1.dist-info/entry_points.txt' 2023-10-05T19:33:45,655 adding 'commonnexus-1.6.1.dist-info/top_level.txt' 2023-10-05T19:33:45,656 adding 'commonnexus-1.6.1.dist-info/RECORD' 2023-10-05T19:33:45,658 removing build/bdist.linux-armv7l/wheel 2023-10-05T19:33:45,783 Building wheel for commonnexus (setup.py): finished with status 'done' 2023-10-05T19:33:45,786 Created wheel for commonnexus: filename=commonnexus-1.6.1-py2.py3-none-any.whl size=80197 sha256=b7a3dc1a97591155c6a2912cc8e6763a6eca46cb9275367bd7611249c05f6d5d 2023-10-05T19:33:45,788 Stored in directory: /tmp/pip-ephem-wheel-cache-z4hh7x1x/wheels/aa/07/ab/fe165de641b8378ab57f4309cbbe4c0fad9a8d6d45696c5570 2023-10-05T19:33:45,799 Successfully built commonnexus 2023-10-05T19:33:45,804 Removed build tracker: '/tmp/pip-build-tracker-ge6h2c2t'