2023-10-08T06:22:57,819 Created temporary directory: /tmp/pip-build-tracker-qanjwov_
2023-10-08T06:22:57,820 Initialized build tracking at /tmp/pip-build-tracker-qanjwov_
2023-10-08T06:22:57,820 Created build tracker: /tmp/pip-build-tracker-qanjwov_
2023-10-08T06:22:57,821 Entered build tracker: /tmp/pip-build-tracker-qanjwov_
2023-10-08T06:22:57,821 Created temporary directory: /tmp/pip-wheel-izcbaxod
2023-10-08T06:22:57,824 Created temporary directory: /tmp/pip-ephem-wheel-cache-us40zxsy
2023-10-08T06:22:57,846 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-10-08T06:22:57,850 2 location(s) to search for versions of pyft:
2023-10-08T06:22:57,850 * https://pypi.org/simple/pyft/
2023-10-08T06:22:57,850 * https://www.piwheels.org/simple/pyft/
2023-10-08T06:22:57,851 Fetching project page and analyzing links: https://pypi.org/simple/pyft/
2023-10-08T06:22:57,852 Getting page https://pypi.org/simple/pyft/
2023-10-08T06:22:57,853 Found index url https://pypi.org/simple/
2023-10-08T06:22:58,070 Fetched page https://pypi.org/simple/pyft/ as application/vnd.pypi.simple.v1+json
2023-10-08T06:22:58,075   Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/d7/62/f180b758be35243ef8a74361f533c974f7294541f16c9bc82cdcc29983e0/pyft-0.1.0-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7)
2023-10-08T06:22:58,077   Found link https://files.pythonhosted.org/packages/c5/b3/4729bed033d7a353ec71381fa9e1ade1bf7a186a837ed3627b31265ddede/pyft-0.1.0.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.0
2023-10-08T06:22:58,077   Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/cb/27/9e42da52a20d9b691ef37a8828764cd904af507b9107a386d55614566304/pyft-0.1.1-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7)
2023-10-08T06:22:58,078   Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/42/ec/1bf1615986fee7e2940dcd8902ef14457658d94208b01d95549253b62843/pyft-0.1.2-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7)
2023-10-08T06:22:58,079   Found link https://files.pythonhosted.org/packages/0a/0b/139d65d937bc185b68d3eff484ce5c3ca5e3bfc3150b2020d0b604b64d66/pyft-0.1.2.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.2
2023-10-08T06:22:58,080   Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/04/9b/b53f6e949dabc348f4bf60f9d11a473764e589d6041be074cbcf20a42900/pyft-0.1.3-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7)
2023-10-08T06:22:58,081   Found link https://files.pythonhosted.org/packages/ab/26/5c78ed72341a5f6b18d9f84a1e9bc91739519c613d9051f732bf902f363d/pyft-0.1.3.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.3
2023-10-08T06:22:58,081   Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/5f/76/cfcbbab37550bc51a7e8ea1bc59451ae618fb3eab2f20f7aa097bc615268/pyft-0.1.4-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7)
2023-10-08T06:22:58,082   Found link https://files.pythonhosted.org/packages/c0/f0/c6f569449c4bbc95ba0281b2423d2c22fd957a7279f33b74ebd6aa94fefb/pyft-0.1.4.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.4
2023-10-08T06:22:58,083   Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/b3/d8/e0bcc1d4dda64ccb39a697d7a2cf2f0afc1edddea2f97aa3b7351ada002d/pyft-0.1.5-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7)
2023-10-08T06:22:58,084   Found link https://files.pythonhosted.org/packages/02/93/e6e05f3380af83b5c4b010925934d31dba5527b59d0f256aef8bd6b6b0d1/pyft-0.1.5.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.5
2023-10-08T06:22:58,085   Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/7f/54/78d366d8c40d15e7e6ea673715003e9d3a1799bec389136fd3646cd2ee41/pyft-0.1.6-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7)
2023-10-08T06:22:58,086   Found link https://files.pythonhosted.org/packages/a3/a5/862a667ea22060468fbb9a217ce8d25c4eda9ff6c64b79f5887e7d4123be/pyft-0.1.6.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.6
2023-10-08T06:22:58,087   Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/ba/62/742233e64de296bde6230c31c8ac312c38ca40fa09f10cb36f8c3da3ba1b/pyft-0.1.7-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7)
2023-10-08T06:22:58,088   Found link https://files.pythonhosted.org/packages/26/f9/bfc6b3b66cd901649cf13ea23361c69321e46ed3b1fe73981863371c14ea/pyft-0.1.7.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.7
2023-10-08T06:22:58,088   Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/0b/b9/8bdacd074d2a6f38e3c2c3508cb1ddd1d1c00963e365f44c979bbd8c4df0/pyft-0.1.8-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7)
2023-10-08T06:22:58,089   Found link https://files.pythonhosted.org/packages/ce/e7/c55525cdea4a7421cd6f08f16b85d094a3f95578f8d410ae6849e20ae1aa/pyft-0.1.8.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.8
2023-10-08T06:22:58,090   Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/aa/81/12871893127d02cf1d8ad68c808878816523e038fbd8fc69ef390b2d3069/pyft-0.1.9-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7)
2023-10-08T06:22:58,090   Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/3a/6b/de60870d8a72ea0dd422eb38f9649692556599868f50cd8a62d5ce0c5e0c/pyft-0.1.9-cp39-cp39-manylinux_2_28_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7)
2023-10-08T06:22:58,091   Found link https://files.pythonhosted.org/packages/1e/7e/215d26ce7f6964e59e74252153d7c41d6ffa58f372bc2180bf9365f86a70/pyft-0.1.9.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.9
2023-10-08T06:22:58,092   Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/d0/9b/3f564e58355225004d47f2f0e666fbcf193520327cf208b7035d08228af2/pyft-0.1.10-cp39-cp39-manylinux_2_28_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7)
2023-10-08T06:22:58,093   Found link https://files.pythonhosted.org/packages/b7/e9/85ad227a8e926f6f737e40243d9c7e74aabefb51808874b8b1b61a3582ef/pyft-0.1.10.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.10
2023-10-08T06:22:58,094 Fetching project page and analyzing links: https://www.piwheels.org/simple/pyft/
2023-10-08T06:22:58,094 Getting page https://www.piwheels.org/simple/pyft/
2023-10-08T06:22:58,096 Found index url https://www.piwheels.org/simple/
2023-10-08T06:22:58,259 Fetched page https://www.piwheels.org/simple/pyft/ as text/html
2023-10-08T06:22:58,260 Skipping link: not a file: https://www.piwheels.org/simple/pyft/
2023-10-08T06:22:58,261 Skipping link: not a file: https://pypi.org/simple/pyft/
2023-10-08T06:22:58,282 Given no hashes to check 1 links for project 'pyft': discarding no candidates
2023-10-08T06:22:58,300 Collecting pyft==0.1.10
2023-10-08T06:22:58,303   Created temporary directory: /tmp/pip-unpack-r5vlffyg
2023-10-08T06:22:58,521   Downloading pyft-0.1.10.tar.gz (8.3 MB)
2023-10-08T06:23:00,152   Added pyft==0.1.10 from https://files.pythonhosted.org/packages/b7/e9/85ad227a8e926f6f737e40243d9c7e74aabefb51808874b8b1b61a3582ef/pyft-0.1.10.tar.gz to build tracker '/tmp/pip-build-tracker-qanjwov_'
2023-10-08T06:23:00,156   Created temporary directory: /tmp/pip-build-env-g892ufwc
2023-10-08T06:23:00,160   Installing build dependencies: started
2023-10-08T06:23:00,162   Running command pip subprocess to install build dependencies
2023-10-08T06:23:01,332   Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2023-10-08T06:23:01,819   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-10-08T06:23:03,198   Collecting maturin<2.0,>=1.1
2023-10-08T06:23:03,624     Using cached https://www.piwheels.org/simple/maturin/maturin-1.3.0-cp311-cp311-linux_armv7l.whl (6.1 MB)
2023-10-08T06:23:06,054   Installing collected packages: maturin
2023-10-08T06:23:06,564   Successfully installed maturin-1.3.0
2023-10-08T06:23:07,126   Installing build dependencies: finished with status 'done'
2023-10-08T06:23:07,130   Getting requirements to build wheel: started
2023-10-08T06:23:07,131   Running command Getting requirements to build wheel
2023-10-08T06:23:07,328   Getting requirements to build wheel: finished with status 'done'
2023-10-08T06:23:07,332   Created temporary directory: /tmp/pip-modern-metadata-ug716pq0
2023-10-08T06:23:07,334   Preparing metadata (pyproject.toml): started
2023-10-08T06:23:07,335   Running command Preparing metadata (pyproject.toml)
2023-10-08T06:23:08,192       Updating crates.io index
2023-10-08T06:23:15,600    Downloading crates ...
2023-10-08T06:23:17,301     Downloaded core_affinity v0.8.1
2023-10-08T06:23:17,325     Downloaded curl-sys v0.4.66+curl-8.3.0
2023-10-08T06:23:22,069     Downloaded libm v0.2.8
2023-10-08T06:23:22,248     Downloaded num-traits v0.2.17
2023-10-08T06:23:22,307     Downloaded wide v0.7.12
2023-10-08T06:23:22,400     Downloaded bytecount v0.6.4
2023-10-08T06:23:22,511   🔗 Found pyo3 bindings
2023-10-08T06:23:22,791   🐍 Found CPython 3.11 at /usr/bin/python3
2023-10-08T06:23:22,791   📡 Using build options features from pyproject.toml
2023-10-08T06:23:22,802   pyft-0.1.10.dist-info
2023-10-08T06:23:22,803   Checking for Rust toolchain....
2023-10-08T06:23:22,803   Running `maturin pep517 write-dist-info --metadata-directory /tmp/pip-modern-metadata-ug716pq0 --interpreter /usr/bin/python3`
2023-10-08T06:23:22,826   Preparing metadata (pyproject.toml): finished with status 'done'
2023-10-08T06:23:22,831   Source in /tmp/pip-wheel-izcbaxod/pyft_c7eb5e4e26374723a5064dfe48eb1113 has version 0.1.10, which satisfies requirement pyft==0.1.10 from https://files.pythonhosted.org/packages/b7/e9/85ad227a8e926f6f737e40243d9c7e74aabefb51808874b8b1b61a3582ef/pyft-0.1.10.tar.gz
2023-10-08T06:23:22,832   Removed pyft==0.1.10 from https://files.pythonhosted.org/packages/b7/e9/85ad227a8e926f6f737e40243d9c7e74aabefb51808874b8b1b61a3582ef/pyft-0.1.10.tar.gz from build tracker '/tmp/pip-build-tracker-qanjwov_'
2023-10-08T06:23:22,837 Created temporary directory: /tmp/pip-unpack-12vno16h
2023-10-08T06:23:22,838 Created temporary directory: /tmp/pip-unpack-sbhxtmn6
2023-10-08T06:23:22,840 Building wheels for collected packages: pyft
2023-10-08T06:23:22,844   Created temporary directory: /tmp/pip-wheel-1jn674pv
2023-10-08T06:23:22,845   Destination directory: /tmp/pip-wheel-1jn674pv
2023-10-08T06:23:22,847   Building wheel for pyft (pyproject.toml): started
2023-10-08T06:23:22,848   Running command Building wheel for pyft (pyproject.toml)
2023-10-08T06:23:23,023   Running `maturin pep517 build-wheel -i /usr/bin/python3 --compatibility off`
2023-10-08T06:23:23,907   🔗 Found pyo3 bindings
2023-10-08T06:23:24,186   🐍 Found CPython 3.11 at /usr/bin/python3
2023-10-08T06:23:24,187   📡 Using build options features from pyproject.toml
2023-10-08T06:23:25,306      Compiling libc v0.2.149
2023-10-08T06:23:25,307      Compiling autocfg v1.1.0
2023-10-08T06:23:25,308      Compiling proc-macro2 v1.0.68
2023-10-08T06:23:25,309      Compiling unicode-ident v1.0.12
2023-10-08T06:23:25,753      Compiling cfg-if v1.0.0
2023-10-08T06:23:25,894      Compiling pkg-config v0.3.27
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2023-10-08T06:23:34,921      Compiling syn v2.0.38
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2023-10-08T06:28:38,592      Compiling bio-types v1.0.1
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2023-10-08T06:29:04,032      Compiling proc-macro-error v1.0.4
2023-10-08T06:29:05,096      Compiling pin-project-internal v1.1.3
2023-10-08T06:29:05,310      Compiling approx v0.5.1
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2023-10-08T06:29:15,234      Compiling bv v0.11.1
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2023-10-08T06:29:16,629      Compiling rand_distr v0.4.3
2023-10-08T06:29:19,833      Compiling pin-project v1.1.3
2023-10-08T06:29:20,052      Compiling flate2 v1.0.27
2023-10-08T06:29:40,068      Compiling url v2.4.1
2023-10-08T06:29:52,942      Compiling pyo3-ffi v0.19.2
2023-10-08T06:29:54,805      Compiling is-terminal v0.4.9
2023-10-08T06:29:55,019      Compiling spin v0.9.8
2023-10-08T06:29:56,856      Compiling nalgebra-macros v0.1.0
2023-10-08T06:30:01,625      Compiling nanorand v0.7.0
2023-10-08T06:30:04,753      Compiling num_cpus v1.16.0
2023-10-08T06:30:08,873      Compiling unicode-width v0.1.11
2023-10-08T06:30:09,286      Compiling futures-sink v0.3.28
2023-10-08T06:30:09,579      Compiling parking_lot_core v0.9.8
2023-10-08T06:30:10,984      Compiling equivalent v1.0.1
2023-10-08T06:30:11,186      Compiling hashbrown v0.14.1
2023-10-08T06:30:13,654      Compiling humantime v2.1.0
2023-10-08T06:30:17,397      Compiling ieee754 v0.2.6
2023-10-08T06:30:18,060      Compiling linear-map v1.2.0
2023-10-08T06:30:18,197      Compiling termcolor v1.3.0
2023-10-08T06:30:19,717      Compiling indexmap v2.0.2
2023-10-08T06:30:24,432      Compiling flume v0.10.14
2023-10-08T06:30:27,166      Compiling console v0.15.7
2023-10-08T06:30:28,234      Compiling core_affinity v0.8.1
2023-10-08T06:30:31,875      Compiling rayon v1.8.0
2023-10-08T06:30:43,213      Compiling nalgebra v0.29.0
2023-10-08T06:30:55,409      Compiling itertools v0.10.5
2023-10-08T06:31:03,635      Compiling enum-map-derive v0.6.0
2023-10-08T06:31:07,306      Compiling csv-core v0.1.11
2023-10-08T06:31:11,733      Compiling atty v0.2.14
2023-10-08T06:31:12,054      Compiling smallvec v1.11.1
2023-10-08T06:31:12,294      Compiling itoa v1.0.9
2023-10-08T06:31:13,125      Compiling bytes v1.5.0
2023-10-08T06:31:14,152      Compiling fixedbitset v0.4.2
2023-10-08T06:31:17,218      Compiling bit-vec v0.6.3
2023-10-08T06:31:19,241      Compiling ryu v1.0.15
2023-10-08T06:31:21,650      Compiling number_prefix v0.4.0
2023-10-08T06:31:22,022      Compiling csv v1.3.0
2023-10-08T06:31:22,412      Compiling indicatif v0.17.7
2023-10-08T06:31:32,584      Compiling bit-set v0.5.3
2023-10-08T06:31:33,706      Compiling petgraph v0.6.4
2023-10-08T06:31:58,133      Compiling env_logger v0.9.3
2023-10-08T06:31:59,994      Compiling enum-map v1.1.1
2023-10-08T06:32:12,812      Compiling getset v0.1.2
2023-10-08T06:32:18,507      Compiling colored v2.0.4
2023-10-08T06:32:22,652      Compiling niffler v2.5.0
2023-10-08T06:32:24,832      Compiling ndarray v0.15.6
2023-10-08T06:32:33,174      Compiling statrs v0.16.0
2023-10-08T06:32:38,838      Compiling multimap v0.8.3
2023-10-08T06:32:40,215      Compiling vec_map v0.8.2
2023-10-08T06:32:41,868      Compiling pyo3 v0.19.2
2023-10-08T06:32:43,609      Compiling fxhash v0.2.1
2023-10-08T06:32:44,391      Compiling itertools v0.11.0
2023-10-08T06:33:03,339      Compiling ordered-float v3.9.1
2023-10-08T06:33:05,845      Compiling itertools-num v0.1.3
2023-10-08T06:33:06,249      Compiling pyo3-macros-backend v0.19.2
2023-10-08T06:33:08,036      Compiling bytecount v0.6.4
2023-10-08T06:33:08,865      Compiling fibertools-rs v0.3.4 (/tmp/pip-wheel-izcbaxod/pyft_c7eb5e4e26374723a5064dfe48eb1113)
2023-10-08T06:33:10,468      Compiling strum v0.25.0
2023-10-08T06:33:10,842      Compiling fastrand v2.0.1
2023-10-08T06:33:13,883      Compiling triple_accel v0.4.0
2023-10-08T06:33:15,805      Compiling editdistancek v1.0.2
2023-10-08T06:33:16,813      Compiling bio v1.4.0
2023-10-08T06:33:22,551      Compiling tempfile v3.8.0
2023-10-08T06:33:32,412      Compiling parking_lot v0.12.1
2023-10-08T06:33:47,483      Compiling pyo3-macros v0.19.2
2023-10-08T06:33:48,777      Compiling unindent v0.1.11
2023-10-08T06:33:50,940      Compiling indoc v1.0.9
2023-10-08T06:33:52,882      Compiling anstyle v1.0.4
2023-10-08T06:33:55,569      Compiling env_logger v0.10.0
2023-10-08T06:34:41,841      Compiling libdeflater v0.12.0
2023-10-08T06:34:42,753      Compiling gzp v0.11.3
2023-10-08T06:38:12,607      Compiling rust-htslib v0.44.1
2023-10-08T06:38:14,443   error[E0308]: mismatched types
2023-10-08T06:38:14,444      --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bam/record.rs:154:16
2023-10-08T06:38:14,444       |
2023-10-08T06:38:14,445   154 |             l: sam_copy.len() as u64,
2023-10-08T06:38:14,445       |                ^^^^^^^^^^^^^^^^^^^^^ expected `u32`, found `u64`

2023-10-08T06:38:14,451   error[E0308]: mismatched types
2023-10-08T06:38:14,452      --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bam/record.rs:155:16
2023-10-08T06:38:14,452       |
2023-10-08T06:38:14,453   155 |             m: sam_copy.len() as u64,
2023-10-08T06:38:14,454       |                ^^^^^^^^^^^^^^^^^^^^^ expected `u32`, found `u64`

2023-10-08T06:38:14,852   error[E0308]: mismatched types
2023-10-08T06:38:14,853       --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bam/record.rs:2324:17
2023-10-08T06:38:14,854        |
2023-10-08T06:38:14,854   2319 |             let ret = hts_sys::bam_mods_query_type(
2023-10-08T06:38:14,855        |                       ---------------------------- arguments to this function are incorrect
2023-10-08T06:38:14,856   ...
2023-10-08T06:38:14,856   2324 |                 &mut canonical,
2023-10-08T06:38:14,857        |                 ^^^^^^^^^^^^^^ expected `*mut u8`, found `&mut i8`
2023-10-08T06:38:14,858        |
2023-10-08T06:38:14,858        = note:    expected raw pointer `*mut u8`
2023-10-08T06:38:14,859                found mutable reference `&mut i8`
2023-10-08T06:38:14,859   note: function defined here
2023-10-08T06:38:14,860       --> /tmp/pip-wheel-izcbaxod/pyft_c7eb5e4e26374723a5064dfe48eb1113/py-ft/target/release/build/hts-sys-b0e93e9b52915fe4/out/bindings.rs:9439:12
2023-10-08T06:38:14,861        |
2023-10-08T06:38:14,861   9439 |     pub fn bam_mods_query_type(
2023-10-08T06:38:14,862        |            ^^^^^^^^^^^^^^^^^^^

2023-10-08T06:38:15,036   error[E0308]: mismatched types
2023-10-08T06:38:15,037       --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bam/mod.rs:1128:29
2023-10-08T06:38:15,037        |
2023-10-08T06:38:15,038   1128 |             (*rec).l_text = l_text as u64;
2023-10-08T06:38:15,039        |             -------------   ^^^^^^^^^^^^^ expected `u32`, found `u64`
2023-10-08T06:38:15,039        |             |
2023-10-08T06:38:15,040        |             expected due to the type of this binding

2023-10-08T06:38:15,081   error[E0308]: mismatched types
2023-10-08T06:38:15,081       --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bam/mod.rs:1393:45
2023-10-08T06:38:15,082        |
2023-10-08T06:38:15,083   1393 |             let rec = htslib::sam_hdr_parse((l_text + 1) as u64, text as *const c_char);
2023-10-08T06:38:15,083        |                       --------------------- ^^^^^^^^^^^^^^^^^^^ expected `u32`, found `u64`
2023-10-08T06:38:15,084        |                       |
2023-10-08T06:38:15,085        |                       arguments to this function are incorrect
2023-10-08T06:38:15,085        |
2023-10-08T06:38:15,086   note: function defined here
2023-10-08T06:38:15,087       --> /tmp/pip-wheel-izcbaxod/pyft_c7eb5e4e26374723a5064dfe48eb1113/py-ft/target/release/build/hts-sys-b0e93e9b52915fe4/out/bindings.rs:8520:12
2023-10-08T06:38:15,088        |
2023-10-08T06:38:15,089   8520 |     pub fn sam_hdr_parse(l_text: size_t, text: *const ::std::os::raw::c_char) -> *mut sam_hdr_t;
2023-10-08T06:38:15,089        |            ^^^^^^^^^^^^^
2023-10-08T06:38:15,090   help: you can convert a `u64` to a `u32` and panic if the converted value doesn't fit
2023-10-08T06:38:15,090        |
2023-10-08T06:38:15,091   1393 |             let rec = htslib::sam_hdr_parse(((l_text + 1) as u64).try_into().unwrap(), text as *const c_char);
2023-10-08T06:38:15,092        |                                             +                   +++++++++++++++++++++

2023-10-08T06:38:15,093   error[E0308]: mismatched types
2023-10-08T06:38:15,094       --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bam/mod.rs:1395:29
2023-10-08T06:38:15,094        |
2023-10-08T06:38:15,095   1395 |             (*rec).l_text = l_text as u64;
2023-10-08T06:38:15,096        |             -------------   ^^^^^^^^^^^^^ expected `u32`, found `u64`
2023-10-08T06:38:15,096        |             |
2023-10-08T06:38:15,097        |             expected due to the type of this binding

2023-10-08T06:38:15,339   error[E0308]: mismatched types
2023-10-08T06:38:15,340        --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bcf/record.rs:1011:48
2023-10-08T06:38:15,341         |
2023-10-08T06:38:15,341   1011  |         let rm_set = unsafe { htslib::kbs_init(remove.len() as u64) };
2023-10-08T06:38:15,342         |                               ---------------- ^^^^^^^^^^^^^^^^^^^ expected `u32`, found `u64`
2023-10-08T06:38:15,343         |                               |
2023-10-08T06:38:15,343         |                               arguments to this function are incorrect
2023-10-08T06:38:15,344         |
2023-10-08T06:38:15,345   note: function defined here
2023-10-08T06:38:15,345        --> /tmp/pip-wheel-izcbaxod/pyft_c7eb5e4e26374723a5064dfe48eb1113/py-ft/target/release/build/hts-sys-b0e93e9b52915fe4/out/bindings.rs:11642:12
2023-10-08T06:38:15,346         |
2023-10-08T06:38:15,347   11642 |     pub fn kbs_init(ni: size_t) -> *mut kbitset_t;
2023-10-08T06:38:15,348         |            ^^^^^^^^
2023-10-08T06:38:15,349   help: you can convert a `u64` to a `u32` and panic if the converted value doesn't fit
2023-10-08T06:38:15,349         |
2023-10-08T06:38:15,350   1011  |         let rm_set = unsafe { htslib::kbs_init((remove.len() as u64).try_into().unwrap()) };
2023-10-08T06:38:15,351         |                                                +                   +++++++++++++++++++++

2023-10-08T06:38:15,575   error[E0308]: mismatched types
2023-10-08T06:38:15,576        --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bgzf/mod.rs:118:17
2023-10-08T06:38:15,577         |
2023-10-08T06:38:15,577   115   |             htslib::bgzf_read(
2023-10-08T06:38:15,578         |             ----------------- arguments to this function are incorrect
2023-10-08T06:38:15,579   ...
2023-10-08T06:38:15,580   118   |                 buf.len() as u64,
2023-10-08T06:38:15,580         |                 ^^^^^^^^^^^^^^^^ expected `u32`, found `u64`
2023-10-08T06:38:15,581         |
2023-10-08T06:38:15,582   note: function defined here
2023-10-08T06:38:15,582        --> /tmp/pip-wheel-izcbaxod/pyft_c7eb5e4e26374723a5064dfe48eb1113/py-ft/target/release/build/hts-sys-b0e93e9b52915fe4/out/bindings.rs:10097:12
2023-10-08T06:38:15,583         |
2023-10-08T06:38:15,584   10097 |     pub fn bgzf_read(fp: *mut BGZF, data: *mut ::std::os::raw::c_void, length: size_t) -> ssize_t;
2023-10-08T06:38:15,585         |            ^^^^^^^^^
2023-10-08T06:38:15,585   help: you can convert a `u64` to a `u32` and panic if the converted value doesn't fit
2023-10-08T06:38:15,586         |
2023-10-08T06:38:15,587   118   |                 (buf.len() as u64).try_into().unwrap(),
2023-10-08T06:38:15,588         |                 +                +++++++++++++++++++++

2023-10-08T06:38:15,607   error[E0308]: mismatched types
2023-10-08T06:38:15,608        --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bgzf/mod.rs:264:17
2023-10-08T06:38:15,608         |
2023-10-08T06:38:15,609   261   |             htslib::bgzf_write(
2023-10-08T06:38:15,609         |             ------------------ arguments to this function are incorrect
2023-10-08T06:38:15,610   ...
2023-10-08T06:38:15,611   264   |                 buf.len() as u64,
2023-10-08T06:38:15,611         |                 ^^^^^^^^^^^^^^^^ expected `u32`, found `u64`
2023-10-08T06:38:15,612         |
2023-10-08T06:38:15,613   note: function defined here
2023-10-08T06:38:15,613        --> /tmp/pip-wheel-izcbaxod/pyft_c7eb5e4e26374723a5064dfe48eb1113/py-ft/target/release/build/hts-sys-b0e93e9b52915fe4/out/bindings.rs:10100:12
2023-10-08T06:38:15,614         |
2023-10-08T06:38:15,614   10100 |     pub fn bgzf_write(
2023-10-08T06:38:15,615         |            ^^^^^^^^^^
2023-10-08T06:38:15,616   help: you can convert a `u64` to a `u32` and panic if the converted value doesn't fit
2023-10-08T06:38:15,617         |
2023-10-08T06:38:15,617   264   |                 (buf.len() as u64).try_into().unwrap(),
2023-10-08T06:38:15,618         |                 +                +++++++++++++++++++++

2023-10-08T06:38:15,789   For more information about this error, try `rustc --explain E0308`.
2023-10-08T06:38:15,805   error: could not compile `rust-htslib` (lib) due to 9 previous errors
2023-10-08T06:38:15,828   💥 maturin failed
2023-10-08T06:38:15,828     Caused by: Failed to build a native library through cargo
2023-10-08T06:38:15,829     Caused by: Cargo build finished with "exit status: 101": `PYO3_ENVIRONMENT_SIGNATURE="cpython-3.11-64bit" PYO3_PYTHON="/usr/bin/python3" PYTHON_SYS_EXECUTABLE="/usr/bin/python3" "cargo" "rustc" "--features" "pyo3/extension-module" "--message-format" "json-render-diagnostics" "--manifest-path" "/tmp/pip-wheel-izcbaxod/pyft_c7eb5e4e26374723a5064dfe48eb1113/py-ft/Cargo.toml" "--release" "--lib"`
2023-10-08T06:38:15,830   Error: command ['maturin', 'pep517', 'build-wheel', '-i', '/usr/bin/python3', '--compatibility', 'off'] returned non-zero exit status 1
2023-10-08T06:38:15,853   ERROR: [present-rich] Building wheel for pyft (pyproject.toml) exited with 1
2023-10-08T06:38:15,866   [bold magenta]full command[/]: [blue]/usr/bin/python3 /usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py build_wheel /tmp/tmpondo6t5o[/]
2023-10-08T06:38:15,867   [bold magenta]cwd[/]: /tmp/pip-wheel-izcbaxod/pyft_c7eb5e4e26374723a5064dfe48eb1113
2023-10-08T06:38:15,867   Building wheel for pyft (pyproject.toml): finished with status 'error'
2023-10-08T06:38:15,870   ERROR: Failed building wheel for pyft
2023-10-08T06:38:15,872 Failed to build pyft
2023-10-08T06:38:15,874 ERROR: Failed to build one or more wheels
2023-10-08T06:38:15,875 Exception information:
2023-10-08T06:38:15,875 Traceback (most recent call last):
2023-10-08T06:38:15,875   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper
2023-10-08T06:38:15,875     status = run_func(*args)
2023-10-08T06:38:15,875              ^^^^^^^^^^^^^^^
2023-10-08T06:38:15,875   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper
2023-10-08T06:38:15,875     return func(self, options, args)
2023-10-08T06:38:15,875            ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-10-08T06:38:15,875   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 181, in run
2023-10-08T06:38:15,875     raise CommandError("Failed to build one or more wheels")
2023-10-08T06:38:15,875 pip._internal.exceptions.CommandError: Failed to build one or more wheels
2023-10-08T06:38:15,880 Removed build tracker: '/tmp/pip-build-tracker-qanjwov_'