2023-10-08T08:53:04,471 Created temporary directory: /tmp/pip-build-tracker-emm26g6n 2023-10-08T08:53:04,472 Initialized build tracking at /tmp/pip-build-tracker-emm26g6n 2023-10-08T08:53:04,473 Created build tracker: /tmp/pip-build-tracker-emm26g6n 2023-10-08T08:53:04,473 Entered build tracker: /tmp/pip-build-tracker-emm26g6n 2023-10-08T08:53:04,473 Created temporary directory: /tmp/pip-wheel-p3j700x7 2023-10-08T08:53:04,478 Created temporary directory: /tmp/pip-ephem-wheel-cache-mw2isci3 2023-10-08T08:53:04,504 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-10-08T08:53:04,508 2 location(s) to search for versions of pyft: 2023-10-08T08:53:04,508 * https://pypi.org/simple/pyft/ 2023-10-08T08:53:04,508 * https://www.piwheels.org/simple/pyft/ 2023-10-08T08:53:04,508 Fetching project page and analyzing links: https://pypi.org/simple/pyft/ 2023-10-08T08:53:04,509 Getting page https://pypi.org/simple/pyft/ 2023-10-08T08:53:04,510 Found index url https://pypi.org/simple/ 2023-10-08T08:53:04,562 Fetched page https://pypi.org/simple/pyft/ as application/vnd.pypi.simple.v1+json 2023-10-08T08:53:04,567 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/d7/62/f180b758be35243ef8a74361f533c974f7294541f16c9bc82cdcc29983e0/pyft-0.1.0-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-10-08T08:53:04,568 Found link https://files.pythonhosted.org/packages/c5/b3/4729bed033d7a353ec71381fa9e1ade1bf7a186a837ed3627b31265ddede/pyft-0.1.0.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.0 2023-10-08T08:53:04,568 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/cb/27/9e42da52a20d9b691ef37a8828764cd904af507b9107a386d55614566304/pyft-0.1.1-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-10-08T08:53:04,568 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/42/ec/1bf1615986fee7e2940dcd8902ef14457658d94208b01d95549253b62843/pyft-0.1.2-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-10-08T08:53:04,569 Found link https://files.pythonhosted.org/packages/0a/0b/139d65d937bc185b68d3eff484ce5c3ca5e3bfc3150b2020d0b604b64d66/pyft-0.1.2.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.2 2023-10-08T08:53:04,569 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/04/9b/b53f6e949dabc348f4bf60f9d11a473764e589d6041be074cbcf20a42900/pyft-0.1.3-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-10-08T08:53:04,570 Found link https://files.pythonhosted.org/packages/ab/26/5c78ed72341a5f6b18d9f84a1e9bc91739519c613d9051f732bf902f363d/pyft-0.1.3.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.3 2023-10-08T08:53:04,570 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/5f/76/cfcbbab37550bc51a7e8ea1bc59451ae618fb3eab2f20f7aa097bc615268/pyft-0.1.4-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-10-08T08:53:04,570 Found link https://files.pythonhosted.org/packages/c0/f0/c6f569449c4bbc95ba0281b2423d2c22fd957a7279f33b74ebd6aa94fefb/pyft-0.1.4.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.4 2023-10-08T08:53:04,571 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/b3/d8/e0bcc1d4dda64ccb39a697d7a2cf2f0afc1edddea2f97aa3b7351ada002d/pyft-0.1.5-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-10-08T08:53:04,571 Found link https://files.pythonhosted.org/packages/02/93/e6e05f3380af83b5c4b010925934d31dba5527b59d0f256aef8bd6b6b0d1/pyft-0.1.5.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.5 2023-10-08T08:53:04,572 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/7f/54/78d366d8c40d15e7e6ea673715003e9d3a1799bec389136fd3646cd2ee41/pyft-0.1.6-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-10-08T08:53:04,572 Found link https://files.pythonhosted.org/packages/a3/a5/862a667ea22060468fbb9a217ce8d25c4eda9ff6c64b79f5887e7d4123be/pyft-0.1.6.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.6 2023-10-08T08:53:04,572 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/ba/62/742233e64de296bde6230c31c8ac312c38ca40fa09f10cb36f8c3da3ba1b/pyft-0.1.7-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-10-08T08:53:04,573 Found link https://files.pythonhosted.org/packages/26/f9/bfc6b3b66cd901649cf13ea23361c69321e46ed3b1fe73981863371c14ea/pyft-0.1.7.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.7 2023-10-08T08:53:04,573 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/0b/b9/8bdacd074d2a6f38e3c2c3508cb1ddd1d1c00963e365f44c979bbd8c4df0/pyft-0.1.8-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-10-08T08:53:04,574 Found link https://files.pythonhosted.org/packages/ce/e7/c55525cdea4a7421cd6f08f16b85d094a3f95578f8d410ae6849e20ae1aa/pyft-0.1.8.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.8 2023-10-08T08:53:04,574 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/aa/81/12871893127d02cf1d8ad68c808878816523e038fbd8fc69ef390b2d3069/pyft-0.1.9-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-10-08T08:53:04,574 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/3a/6b/de60870d8a72ea0dd422eb38f9649692556599868f50cd8a62d5ce0c5e0c/pyft-0.1.9-cp39-cp39-manylinux_2_28_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-10-08T08:53:04,575 Found link https://files.pythonhosted.org/packages/1e/7e/215d26ce7f6964e59e74252153d7c41d6ffa58f372bc2180bf9365f86a70/pyft-0.1.9.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.9 2023-10-08T08:53:04,575 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/d0/9b/3f564e58355225004d47f2f0e666fbcf193520327cf208b7035d08228af2/pyft-0.1.10-cp39-cp39-manylinux_2_28_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2023-10-08T08:53:04,576 Found link https://files.pythonhosted.org/packages/b7/e9/85ad227a8e926f6f737e40243d9c7e74aabefb51808874b8b1b61a3582ef/pyft-0.1.10.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.10 2023-10-08T08:53:04,576 Fetching project page and analyzing links: https://www.piwheels.org/simple/pyft/ 2023-10-08T08:53:04,576 Getting page https://www.piwheels.org/simple/pyft/ 2023-10-08T08:53:04,577 Found index url https://www.piwheels.org/simple/ 2023-10-08T08:53:04,647 Fetched page https://www.piwheels.org/simple/pyft/ as text/html 2023-10-08T08:53:04,648 Skipping link: not a file: https://www.piwheels.org/simple/pyft/ 2023-10-08T08:53:04,649 Skipping link: not a file: https://pypi.org/simple/pyft/ 2023-10-08T08:53:04,674 Given no hashes to check 1 links for project 'pyft': discarding no candidates 2023-10-08T08:53:04,697 Collecting pyft==0.1.10 2023-10-08T08:53:04,699 Created temporary directory: /tmp/pip-unpack-3gzwqka3 2023-10-08T08:53:04,751 Downloading pyft-0.1.10.tar.gz (8.3 MB) 2023-10-08T08:53:05,838 Added pyft==0.1.10 from https://files.pythonhosted.org/packages/b7/e9/85ad227a8e926f6f737e40243d9c7e74aabefb51808874b8b1b61a3582ef/pyft-0.1.10.tar.gz to build tracker '/tmp/pip-build-tracker-emm26g6n' 2023-10-08T08:53:05,842 Created temporary directory: /tmp/pip-build-env-6_4myn74 2023-10-08T08:53:05,852 Installing build dependencies: started 2023-10-08T08:53:05,853 Running command pip subprocess to install build dependencies 2023-10-08T08:53:07,629 Using pip 23.2.1 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9) 2023-10-08T08:53:08,150 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-10-08T08:53:09,498 Collecting maturin<2.0,>=1.1 2023-10-08T08:53:09,989 Using cached https://www.piwheels.org/simple/maturin/maturin-1.3.0-cp39-cp39-linux_armv7l.whl (6.1 MB) 2023-10-08T08:53:10,315 Collecting tomli>=1.1.0 (from maturin<2.0,>=1.1) 2023-10-08T08:53:10,334 Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB) 2023-10-08T08:53:11,711 Installing collected packages: tomli, maturin 2023-10-08T08:53:12,537 Successfully installed maturin-1.3.0 tomli-2.0.1 2023-10-08T08:53:12,993 Installing build dependencies: finished with status 'done' 2023-10-08T08:53:13,000 Getting requirements to build wheel: started 2023-10-08T08:53:13,001 Running command Getting requirements to build wheel 2023-10-08T08:53:13,244 Getting requirements to build wheel: finished with status 'done' 2023-10-08T08:53:13,249 Created temporary directory: /tmp/pip-modern-metadata-95bfmlu6 2023-10-08T08:53:13,251 Preparing metadata (pyproject.toml): started 2023-10-08T08:53:13,252 Running command Preparing metadata (pyproject.toml) 2023-10-08T08:53:13,908 Updating crates.io index 2023-10-08T08:53:18,743 Downloading crates ... 2023-10-08T08:53:20,445 Downloaded feature-probe v0.1.1 2023-10-08T08:53:20,467 Downloaded curl-sys v0.4.66+curl-8.3.0 2023-10-08T08:53:26,470 Downloaded enum-map v1.1.1 2023-10-08T08:53:26,489 Downloaded bio v1.4.0 2023-10-08T08:53:26,662 Downloaded itertools-num v0.1.3 2023-10-08T08:53:26,682 Downloaded editdistancek v1.0.2 2023-10-08T08:53:26,699 Downloaded core_affinity v0.8.1 2023-10-08T08:53:26,716 Downloaded gzp v0.11.3 2023-10-08T08:53:26,948 Downloaded num-traits v0.2.17 2023-10-08T08:53:26,998 Downloaded indicatif v0.17.7 2023-10-08T08:53:27,061 Downloaded rust-htslib v0.44.1 2023-10-08T08:53:27,875 Downloaded bv v0.11.1 2023-10-08T08:53:27,984 Downloaded byteorder v1.5.0 2023-10-08T08:53:28,024 Downloaded libdeflater v0.12.0 2023-10-08T08:53:28,073 Downloaded enum-map-derive v0.6.0 2023-10-08T08:53:28,087 Downloaded triple_accel v0.4.0 2023-10-08T08:53:28,129 Downloaded niffler v2.5.0 2023-10-08T08:53:28,188 Downloaded libdeflate-sys v0.12.0 2023-10-08T08:53:28,383 Downloaded bytecount v0.6.4 2023-10-08T08:53:28,492 🔗 Found pyo3 bindings 2023-10-08T08:53:28,779 🐍 Found CPython 3.9 at /usr/bin/python3 2023-10-08T08:53:28,780 📡 Using build options features from pyproject.toml 2023-10-08T08:53:28,790 pyft-0.1.10.dist-info 2023-10-08T08:53:28,791 Checking for Rust toolchain.... 2023-10-08T08:53:28,791 Running `maturin pep517 write-dist-info --metadata-directory /tmp/pip-modern-metadata-95bfmlu6 --interpreter /usr/bin/python3` 2023-10-08T08:53:28,810 Preparing metadata (pyproject.toml): finished with status 'done' 2023-10-08T08:53:28,816 Source in /tmp/pip-wheel-p3j700x7/pyft_c64683d5c1a241aa845ef65be644ac30 has version 0.1.10, which satisfies requirement pyft==0.1.10 from https://files.pythonhosted.org/packages/b7/e9/85ad227a8e926f6f737e40243d9c7e74aabefb51808874b8b1b61a3582ef/pyft-0.1.10.tar.gz 2023-10-08T08:53:28,817 Removed pyft==0.1.10 from https://files.pythonhosted.org/packages/b7/e9/85ad227a8e926f6f737e40243d9c7e74aabefb51808874b8b1b61a3582ef/pyft-0.1.10.tar.gz from build tracker '/tmp/pip-build-tracker-emm26g6n' 2023-10-08T08:53:28,822 Created temporary directory: /tmp/pip-unpack-vzitnxp2 2023-10-08T08:53:28,823 Created temporary directory: /tmp/pip-unpack-p0_rm4cf 2023-10-08T08:53:28,825 Building wheels for collected packages: pyft 2023-10-08T08:53:28,829 Created temporary directory: /tmp/pip-wheel-cs9ppjha 2023-10-08T08:53:28,829 Destination directory: /tmp/pip-wheel-cs9ppjha 2023-10-08T08:53:28,831 Building wheel for pyft (pyproject.toml): started 2023-10-08T08:53:28,832 Running command Building wheel for pyft (pyproject.toml) 2023-10-08T08:53:28,995 Running `maturin pep517 build-wheel -i /usr/bin/python3 --compatibility off` 2023-10-08T08:53:29,881 🔗 Found pyo3 bindings 2023-10-08T08:53:30,167 🐍 Found CPython 3.9 at /usr/bin/python3 2023-10-08T08:53:30,168 📡 Using build options features from pyproject.toml 2023-10-08T08:53:31,298 Compiling libc v0.2.149 2023-10-08T08:53:31,298 Compiling autocfg v1.1.0 2023-10-08T08:53:31,298 Compiling proc-macro2 v1.0.68 2023-10-08T08:53:31,299 Compiling unicode-ident v1.0.12 2023-10-08T08:53:31,722 Compiling cfg-if v1.0.0 2023-10-08T08:53:31,897 Compiling pkg-config v0.3.27 2023-10-08T08:53:34,467 Compiling syn v1.0.109 2023-10-08T08:53:37,389 Compiling vcpkg v0.2.15 2023-10-08T08:53:41,607 Compiling quote v1.0.33 2023-10-08T08:53:43,127 Compiling jobserver v0.1.26 2023-10-08T08:53:44,650 Compiling cc v1.0.83 2023-10-08T08:53:46,096 Compiling syn v2.0.38 2023-10-08T08:53:46,824 Compiling libm v0.2.8 2023-10-08T08:53:48,368 Compiling num-traits v0.2.17 2023-10-08T08:53:51,530 Compiling cmake v0.1.50 2023-10-08T08:53:59,519 Compiling libz-sys v1.1.12 2023-10-08T08:54:09,283 Compiling memchr v2.6.4 2023-10-08T08:54:15,685 Compiling scopeguard v1.2.0 2023-10-08T08:54:17,846 Compiling getrandom v0.2.10 2023-10-08T08:54:19,667 Compiling openssl-src v300.1.5+3.1.3 2023-10-08T08:54:22,614 Compiling target-lexicon v0.12.11 2023-10-08T08:54:27,648 Compiling openssl-sys v0.9.93 2023-10-08T08:54:32,466 Compiling aho-corasick v1.1.1 2023-10-08T08:54:49,588 Compiling memoffset v0.9.0 2023-10-08T08:54:51,126 Compiling lazy_static v1.4.0 2023-10-08T08:54:51,221 Compiling regex-syntax v0.7.5 2023-10-08T08:54:51,393 Compiling thiserror v1.0.49 2023-10-08T08:54:53,932 Compiling thiserror-impl v1.0.49 2023-10-08T08:55:11,988 Compiling lock_api v0.4.10 2023-10-08T08:55:13,579 Compiling regex-automata v0.3.9 2023-10-08T08:55:18,402 Compiling crossbeam-utils v0.8.16 2023-10-08T08:55:20,471 Compiling rustversion v1.0.14 2023-10-08T08:55:23,202 Compiling semver v0.1.20 2023-10-08T08:55:25,739 Compiling version_check v0.9.4 2023-10-08T08:55:28,400 Compiling rustc_version v0.1.7 2023-10-08T08:55:30,151 Compiling pyo3-build-config v0.19.2 2023-10-08T08:55:38,071 Compiling regex v1.9.6 2023-10-08T08:55:55,695 Compiling lzma-sys v0.1.20 2023-10-08T08:55:58,826 Compiling bzip2-sys v0.1.11+1.0.8 2023-10-08T08:56:01,198 Compiling curl-sys v0.4.66+curl-8.3.0 2023-10-08T08:56:04,869 Compiling crossbeam-epoch v0.9.15 2023-10-08T08:56:06,848 Compiling num-integer v0.1.45 2023-10-08T08:56:08,250 Compiling quick-error v1.2.3 2023-10-08T08:56:08,503 Compiling tinyvec_macros v0.1.1 2023-10-08T08:56:08,644 Compiling rustix v0.38.17 2023-10-08T08:56:11,332 Compiling serde v1.0.188 2023-10-08T08:56:13,769 Compiling either v1.9.0 2023-10-08T08:56:15,769 Compiling tinyvec v1.6.0 2023-10-08T08:56:21,380 Compiling fs-utils v1.1.4 2023-10-08T08:56:52,716 Compiling newtype_derive v0.1.6 2023-10-08T08:56:54,143 Compiling serde_derive v1.0.188 2023-10-08T08:57:21,926 Compiling rand_core v0.6.4 2023-10-08T08:57:23,723 Compiling matrixmultiply v0.3.8 2023-10-08T08:57:25,340 Compiling crc32fast v1.3.2 2023-10-08T08:57:27,059 Compiling bytemuck v1.14.0 2023-10-08T08:57:27,266 Compiling bitflags v2.4.0 2023-10-08T08:57:28,973 Compiling byteorder v1.5.0 2023-10-08T08:57:29,546 Compiling linux-raw-sys v0.4.8 2023-10-08T08:57:31,572 Compiling paste v1.0.14 2023-10-08T08:57:32,128 Compiling glob v0.3.1 2023-10-08T08:57:33,771 Compiling once_cell v1.18.0 2023-10-08T08:57:35,477 Compiling heck v0.4.1 2023-10-08T08:57:36,379 Compiling ppv-lite86 v0.2.17 2023-10-08T08:57:37,127 Compiling strum_macros v0.25.2 2023-10-08T08:57:38,174 Compiling hts-sys v2.1.1 2023-10-08T08:57:39,420 Compiling rand_chacha v0.3.1 2023-10-08T08:57:59,151 Compiling safe_arch v0.7.1 2023-10-08T08:58:05,741 Compiling unicode-normalization v0.1.22 2023-10-08T08:58:16,288 Compiling proc-macro-error-attr v1.0.4 2023-10-08T08:58:17,765 Compiling derive-new v0.5.9 2023-10-08T08:58:24,520 Compiling num-complex v0.4.4 2023-10-08T08:58:30,539 Compiling libdeflate-sys v0.12.0 2023-10-08T08:58:30,700 Compiling num-rational v0.4.1 2023-10-08T08:58:32,388 Compiling typenum v1.17.0 2023-10-08T08:58:33,100 Compiling futures-core v0.3.28 2023-10-08T08:58:34,710 Compiling rayon-core v1.12.0 2023-10-08T08:58:36,169 Compiling unicode-bidi v0.3.13 2023-10-08T08:58:36,247 Compiling adler v1.0.2 2023-10-08T08:58:37,362 Compiling percent-encoding v2.3.0 2023-10-08T08:58:37,455 Compiling rawpointer v0.2.1 2023-10-08T08:58:39,534 Compiling idna v0.4.0 2023-10-08T08:58:48,115 Compiling form_urlencoded v1.2.0 2023-10-08T08:58:50,295 Compiling miniz_oxide v0.7.1 2023-10-08T08:58:52,557 Compiling bio-types v1.0.1 2023-10-08T08:58:55,465 Compiling crossbeam-deque v0.8.3 2023-10-08T08:58:58,784 Compiling wide v0.7.12 2023-10-08T08:59:06,176 Compiling rand v0.8.5 2023-10-08T08:59:08,896 Compiling proc-macro-error v1.0.4 2023-10-08T08:59:10,459 Compiling pin-project-internal v1.1.3 2023-10-08T08:59:19,218 Compiling approx v0.5.1 2023-10-08T08:59:20,241 Compiling log v0.4.20 2023-10-08T08:59:22,876 Compiling anyhow v1.0.75 2023-10-08T08:59:25,348 Compiling feature-probe v0.1.1 2023-10-08T08:59:25,710 Compiling portable-atomic v1.4.3 2023-10-08T08:59:26,380 Compiling custom_derive v0.1.7 2023-10-08T08:59:26,587 Compiling bv v0.11.1 2023-10-08T08:59:28,207 Compiling pin-project v1.1.3 2023-10-08T08:59:28,846 Compiling simba v0.6.0 2023-10-08T08:59:29,635 Compiling rand_distr v0.4.3 2023-10-08T08:59:30,362 Compiling flate2 v1.0.27 2023-10-08T08:59:56,270 Compiling url v2.4.1 2023-10-08T08:59:59,464 Compiling is-terminal v0.4.9 2023-10-08T08:59:59,693 Compiling pyo3-ffi v0.19.2 2023-10-08T09:00:03,064 Compiling spin v0.9.8 2023-10-08T09:00:05,263 Compiling nalgebra-macros v0.1.0 2023-10-08T09:00:12,198 Compiling nanorand v0.7.0 2023-10-08T09:00:15,733 Compiling num_cpus v1.16.0 2023-10-08T09:00:23,197 Compiling termcolor v1.3.0 2023-10-08T09:00:24,209 Compiling ieee754 v0.2.6 2023-10-08T09:00:26,391 Compiling unicode-width v0.1.11 2023-10-08T09:00:26,823 Compiling linear-map v1.2.0 2023-10-08T09:00:28,570 Compiling equivalent v1.0.1 2023-10-08T09:00:29,583 Compiling hashbrown v0.14.1 2023-10-08T09:00:30,814 Compiling futures-sink v0.3.28 2023-10-08T09:00:31,140 Compiling humantime v2.1.0 2023-10-08T09:00:36,019 Compiling parking_lot_core v0.9.8 2023-10-08T09:00:36,410 Compiling indexmap v2.0.2 2023-10-08T09:00:37,837 Compiling flume v0.10.14 2023-10-08T09:00:41,353 Compiling console v0.15.7 2023-10-08T09:00:43,401 Compiling core_affinity v0.8.1 2023-10-08T09:00:46,961 Compiling nalgebra v0.29.0 2023-10-08T09:00:51,936 Compiling rayon v1.8.0 2023-10-08T09:01:07,281 Compiling itertools v0.10.5 2023-10-08T09:01:23,571 Compiling enum-map-derive v0.6.0 2023-10-08T09:01:24,454 Compiling csv-core v0.1.11 2023-10-08T09:01:28,328 Compiling atty v0.2.14 2023-10-08T09:01:28,614 Compiling ryu v1.0.15 2023-10-08T09:01:29,243 Compiling itoa v1.0.9 2023-10-08T09:01:30,063 Compiling fixedbitset v0.4.2 2023-10-08T09:01:31,224 Compiling bit-vec v0.6.3 2023-10-08T09:01:33,120 Compiling bytes v1.5.0 2023-10-08T09:01:33,234 Compiling number_prefix v0.4.0 2023-10-08T09:01:33,944 Compiling smallvec v1.11.1 2023-10-08T09:01:39,086 Compiling indicatif v0.17.7 2023-10-08T09:01:42,270 Compiling bit-set v0.5.3 2023-10-08T09:01:43,435 Compiling petgraph v0.6.4 2023-10-08T09:02:06,428 Compiling csv v1.3.0 2023-10-08T09:02:15,318 Compiling env_logger v0.9.3 2023-10-08T09:02:19,032 Compiling enum-map v1.1.1 2023-10-08T09:02:31,191 Compiling getset v0.1.2 2023-10-08T09:02:33,813 Compiling statrs v0.16.0 2023-10-08T09:02:38,238 Compiling colored v2.0.4 2023-10-08T09:02:39,491 Compiling niffler v2.5.0 2023-10-08T09:02:44,026 Compiling ndarray v0.15.6 2023-10-08T09:02:54,119 Compiling vec_map v0.8.2 2023-10-08T09:02:55,675 Compiling multimap v0.8.3 2023-10-08T09:02:56,949 Compiling pyo3 v0.19.2 2023-10-08T09:02:58,808 Compiling fxhash v0.2.1 2023-10-08T09:02:59,449 Compiling itertools v0.11.0 2023-10-08T09:03:05,063 Compiling pyo3-macros-backend v0.19.2 2023-10-08T09:03:16,254 Compiling itertools-num v0.1.3 2023-10-08T09:03:16,643 Compiling ordered-float v3.9.1 2023-10-08T09:03:21,156 Compiling strum v0.25.0 2023-10-08T09:03:21,558 Compiling editdistancek v1.0.2 2023-10-08T09:03:22,571 Compiling fastrand v2.0.1 2023-10-08T09:03:25,481 Compiling fibertools-rs v0.3.4 (/tmp/pip-wheel-p3j700x7/pyft_c64683d5c1a241aa845ef65be644ac30) 2023-10-08T09:03:27,350 Compiling bytecount v0.6.4 2023-10-08T09:03:28,152 Compiling triple_accel v0.4.0 2023-10-08T09:03:34,722 Compiling bio v1.4.0 2023-10-08T09:03:36,529 Compiling tempfile v3.8.0 2023-10-08T09:03:43,437 Compiling pyo3-macros v0.19.2 2023-10-08T09:03:46,970 Compiling parking_lot v0.12.1 2023-10-08T09:03:55,086 Compiling indoc v1.0.9 2023-10-08T09:03:58,290 Compiling unindent v0.1.11 2023-10-08T09:03:59,796 Compiling anstyle v1.0.4 2023-10-08T09:04:02,238 Compiling env_logger v0.10.0 2023-10-08T09:04:47,344 Compiling libdeflater v0.12.0 2023-10-08T09:04:48,244 Compiling gzp v0.11.3 2023-10-08T09:07:42,326 Compiling rust-htslib v0.44.1 2023-10-08T09:07:44,173 error[E0308]: mismatched types 2023-10-08T09:07:44,173 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bam/record.rs:154:16 2023-10-08T09:07:44,173 | 2023-10-08T09:07:44,173 154 | l: sam_copy.len() as u64, 2023-10-08T09:07:44,173 | ^^^^^^^^^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-10-08T09:07:44,181 error[E0308]: mismatched types 2023-10-08T09:07:44,182 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bam/record.rs:155:16 2023-10-08T09:07:44,182 | 2023-10-08T09:07:44,182 155 | m: sam_copy.len() as u64, 2023-10-08T09:07:44,182 | ^^^^^^^^^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-10-08T09:07:44,572 error[E0308]: mismatched types 2023-10-08T09:07:44,573 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bam/record.rs:2324:17 2023-10-08T09:07:44,573 | 2023-10-08T09:07:44,573 2319 | let ret = hts_sys::bam_mods_query_type( 2023-10-08T09:07:44,573 | ---------------------------- arguments to this function are incorrect 2023-10-08T09:07:44,573 ... 2023-10-08T09:07:44,573 2324 | &mut canonical, 2023-10-08T09:07:44,574 | ^^^^^^^^^^^^^^ expected `*mut u8`, found `&mut i8` 2023-10-08T09:07:44,574 | 2023-10-08T09:07:44,574 = note: expected raw pointer `*mut u8` 2023-10-08T09:07:44,574 found mutable reference `&mut i8` 2023-10-08T09:07:44,574 note: function defined here 2023-10-08T09:07:44,574 --> /tmp/pip-wheel-p3j700x7/pyft_c64683d5c1a241aa845ef65be644ac30/py-ft/target/release/build/hts-sys-b0e93e9b52915fe4/out/bindings.rs:9439:12 2023-10-08T09:07:44,575 | 2023-10-08T09:07:44,575 9439 | pub fn bam_mods_query_type( 2023-10-08T09:07:44,575 | ^^^^^^^^^^^^^^^^^^^ 2023-10-08T09:07:44,747 error[E0308]: mismatched types 2023-10-08T09:07:44,747 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bam/mod.rs:1128:29 2023-10-08T09:07:44,747 | 2023-10-08T09:07:44,747 1128 | (*rec).l_text = l_text as u64; 2023-10-08T09:07:44,748 | ------------- ^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-10-08T09:07:44,748 | | 2023-10-08T09:07:44,748 | expected due to the type of this binding 2023-10-08T09:07:44,787 error[E0308]: mismatched types 2023-10-08T09:07:44,787 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bam/mod.rs:1393:45 2023-10-08T09:07:44,787 | 2023-10-08T09:07:44,787 1393 | let rec = htslib::sam_hdr_parse((l_text + 1) as u64, text as *const c_char); 2023-10-08T09:07:44,788 | --------------------- ^^^^^^^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-10-08T09:07:44,788 | | 2023-10-08T09:07:44,788 | arguments to this function are incorrect 2023-10-08T09:07:44,788 | 2023-10-08T09:07:44,788 note: function defined here 2023-10-08T09:07:44,788 --> /tmp/pip-wheel-p3j700x7/pyft_c64683d5c1a241aa845ef65be644ac30/py-ft/target/release/build/hts-sys-b0e93e9b52915fe4/out/bindings.rs:8520:12 2023-10-08T09:07:44,788 | 2023-10-08T09:07:44,788 8520 | pub fn sam_hdr_parse(l_text: size_t, text: *const ::std::os::raw::c_char) -> *mut sam_hdr_t; 2023-10-08T09:07:44,789 | ^^^^^^^^^^^^^ 2023-10-08T09:07:44,789 help: you can convert a `u64` to a `u32` and panic if the converted value doesn't fit 2023-10-08T09:07:44,789 | 2023-10-08T09:07:44,789 1393 | let rec = htslib::sam_hdr_parse(((l_text + 1) as u64).try_into().unwrap(), text as *const c_char); 2023-10-08T09:07:44,789 | + +++++++++++++++++++++ 2023-10-08T09:07:44,794 error[E0308]: mismatched types 2023-10-08T09:07:44,794 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bam/mod.rs:1395:29 2023-10-08T09:07:44,794 | 2023-10-08T09:07:44,795 1395 | (*rec).l_text = l_text as u64; 2023-10-08T09:07:44,795 | ------------- ^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-10-08T09:07:44,795 | | 2023-10-08T09:07:44,795 | expected due to the type of this binding 2023-10-08T09:07:45,035 error[E0308]: mismatched types 2023-10-08T09:07:45,035 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bcf/record.rs:1011:48 2023-10-08T09:07:45,035 | 2023-10-08T09:07:45,035 1011 | let rm_set = unsafe { htslib::kbs_init(remove.len() as u64) }; 2023-10-08T09:07:45,036 | ---------------- ^^^^^^^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-10-08T09:07:45,036 | | 2023-10-08T09:07:45,036 | arguments to this function are incorrect 2023-10-08T09:07:45,036 | 2023-10-08T09:07:45,036 note: function defined here 2023-10-08T09:07:45,036 --> /tmp/pip-wheel-p3j700x7/pyft_c64683d5c1a241aa845ef65be644ac30/py-ft/target/release/build/hts-sys-b0e93e9b52915fe4/out/bindings.rs:11642:12 2023-10-08T09:07:45,036 | 2023-10-08T09:07:45,037 11642 | pub fn kbs_init(ni: size_t) -> *mut kbitset_t; 2023-10-08T09:07:45,037 | ^^^^^^^^ 2023-10-08T09:07:45,037 help: you can convert a `u64` to a `u32` and panic if the converted value doesn't fit 2023-10-08T09:07:45,037 | 2023-10-08T09:07:45,037 1011 | let rm_set = unsafe { htslib::kbs_init((remove.len() as u64).try_into().unwrap()) }; 2023-10-08T09:07:45,037 | + +++++++++++++++++++++ 2023-10-08T09:07:45,263 error[E0308]: mismatched types 2023-10-08T09:07:45,264 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bgzf/mod.rs:118:17 2023-10-08T09:07:45,264 | 2023-10-08T09:07:45,264 115 | htslib::bgzf_read( 2023-10-08T09:07:45,264 | ----------------- arguments to this function are incorrect 2023-10-08T09:07:45,264 ... 2023-10-08T09:07:45,264 118 | buf.len() as u64, 2023-10-08T09:07:45,265 | ^^^^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-10-08T09:07:45,265 | 2023-10-08T09:07:45,265 note: function defined here 2023-10-08T09:07:45,265 --> /tmp/pip-wheel-p3j700x7/pyft_c64683d5c1a241aa845ef65be644ac30/py-ft/target/release/build/hts-sys-b0e93e9b52915fe4/out/bindings.rs:10097:12 2023-10-08T09:07:45,265 | 2023-10-08T09:07:45,265 10097 | pub fn bgzf_read(fp: *mut BGZF, data: *mut ::std::os::raw::c_void, length: size_t) -> ssize_t; 2023-10-08T09:07:45,265 | ^^^^^^^^^ 2023-10-08T09:07:45,266 help: you can convert a `u64` to a `u32` and panic if the converted value doesn't fit 2023-10-08T09:07:45,266 | 2023-10-08T09:07:45,266 118 | (buf.len() as u64).try_into().unwrap(), 2023-10-08T09:07:45,266 | + +++++++++++++++++++++ 2023-10-08T09:07:45,291 error[E0308]: mismatched types 2023-10-08T09:07:45,292 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.44.1/src/bgzf/mod.rs:264:17 2023-10-08T09:07:45,292 | 2023-10-08T09:07:45,292 261 | htslib::bgzf_write( 2023-10-08T09:07:45,292 | ------------------ arguments to this function are incorrect 2023-10-08T09:07:45,292 ... 2023-10-08T09:07:45,292 264 | buf.len() as u64, 2023-10-08T09:07:45,293 | ^^^^^^^^^^^^^^^^ expected `u32`, found `u64` 2023-10-08T09:07:45,293 | 2023-10-08T09:07:45,293 note: function defined here 2023-10-08T09:07:45,293 --> /tmp/pip-wheel-p3j700x7/pyft_c64683d5c1a241aa845ef65be644ac30/py-ft/target/release/build/hts-sys-b0e93e9b52915fe4/out/bindings.rs:10100:12 2023-10-08T09:07:45,293 | 2023-10-08T09:07:45,293 10100 | pub fn bgzf_write( 2023-10-08T09:07:45,294 | ^^^^^^^^^^ 2023-10-08T09:07:45,294 help: you can convert a `u64` to a `u32` and panic if the converted value doesn't fit 2023-10-08T09:07:45,294 | 2023-10-08T09:07:45,294 264 | (buf.len() as u64).try_into().unwrap(), 2023-10-08T09:07:45,294 | + +++++++++++++++++++++ 2023-10-08T09:07:45,466 For more information about this error, try `rustc --explain E0308`. 2023-10-08T09:07:45,487 error: could not compile `rust-htslib` (lib) due to 9 previous errors 2023-10-08T09:07:45,519 💥 maturin failed 2023-10-08T09:07:45,519 Caused by: Failed to build a native library through cargo 2023-10-08T09:07:45,519 Caused by: Cargo build finished with "exit status: 101": `PYO3_ENVIRONMENT_SIGNATURE="cpython-3.9-64bit" PYO3_PYTHON="/usr/bin/python3" PYTHON_SYS_EXECUTABLE="/usr/bin/python3" "cargo" "rustc" "--features" "pyo3/extension-module" "--message-format" "json-render-diagnostics" "--manifest-path" "/tmp/pip-wheel-p3j700x7/pyft_c64683d5c1a241aa845ef65be644ac30/py-ft/Cargo.toml" "--release" "--lib"` 2023-10-08T09:07:45,523 Error: command ['maturin', 'pep517', 'build-wheel', '-i', '/usr/bin/python3', '--compatibility', 'off'] returned non-zero exit status 1 2023-10-08T09:07:45,540 ERROR: [present-rich] Building wheel for pyft (pyproject.toml) exited with 1 2023-10-08T09:07:45,558 [bold magenta]full command[/]: [blue]/usr/bin/python3 /usr/local/lib/python3.9/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py build_wheel /tmp/tmpt5cztno_[/] 2023-10-08T09:07:45,558 [bold magenta]cwd[/]: /tmp/pip-wheel-p3j700x7/pyft_c64683d5c1a241aa845ef65be644ac30 2023-10-08T09:07:45,558 Building wheel for pyft (pyproject.toml): finished with status 'error' 2023-10-08T09:07:45,561 ERROR: Failed building wheel for pyft 2023-10-08T09:07:45,566 Failed to build pyft 2023-10-08T09:07:45,567 ERROR: Failed to build one or more wheels 2023-10-08T09:07:45,568 Exception information: 2023-10-08T09:07:45,568 Traceback (most recent call last): 2023-10-08T09:07:45,568 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper 2023-10-08T09:07:45,568 status = run_func(*args) 2023-10-08T09:07:45,568 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper 2023-10-08T09:07:45,568 return func(self, options, args) 2023-10-08T09:07:45,568 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/commands/wheel.py", line 181, in run 2023-10-08T09:07:45,568 raise CommandError("Failed to build one or more wheels") 2023-10-08T09:07:45,568 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2023-10-08T09:07:45,583 Removed build tracker: '/tmp/pip-build-tracker-emm26g6n'