2023-10-10T00:46:16,422 Created temporary directory: /tmp/pip-build-tracker-30ub3puu
2023-10-10T00:46:16,426 Initialized build tracking at /tmp/pip-build-tracker-30ub3puu
2023-10-10T00:46:16,427 Created build tracker: /tmp/pip-build-tracker-30ub3puu
2023-10-10T00:46:16,427 Entered build tracker: /tmp/pip-build-tracker-30ub3puu
2023-10-10T00:46:16,428 Created temporary directory: /tmp/pip-wheel-pxur5f_a
2023-10-10T00:46:16,438 Created temporary directory: /tmp/pip-ephem-wheel-cache-aays2su8
2023-10-10T00:46:16,496 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-10-10T00:46:16,504 2 location(s) to search for versions of scrnatools:
2023-10-10T00:46:16,504 * https://pypi.org/simple/scrnatools/
2023-10-10T00:46:16,504 * https://www.piwheels.org/simple/scrnatools/
2023-10-10T00:46:16,505 Fetching project page and analyzing links: https://pypi.org/simple/scrnatools/
2023-10-10T00:46:16,506 Getting page https://pypi.org/simple/scrnatools/
2023-10-10T00:46:16,515 Found index url https://pypi.org/simple/
2023-10-10T00:46:16,626 Fetched page https://pypi.org/simple/scrnatools/ as application/vnd.pypi.simple.v1+json
2023-10-10T00:46:16,639   Found link https://files.pythonhosted.org/packages/f3/7c/08b64a3dbd3d2d1ec4c6e97375ab49ad92eb64e090931483da1b95f95eca/scrnatools-0.1.tar.gz (from https://pypi.org/simple/scrnatools/), version: 0.1
2023-10-10T00:46:16,640   Found link https://files.pythonhosted.org/packages/84/72/a94a5d6ce6c233aea560dd6f646e492dee498d34a5e77e252234f6089bac/scrnatools-0.2.tar.gz (from https://pypi.org/simple/scrnatools/), version: 0.2
2023-10-10T00:46:16,641   Skipping link: No binaries permitted for scrnatools: https://files.pythonhosted.org/packages/2f/dc/863061daf35f0ea9556d112550042e07ae36d76d63f71f11226429a8e0f8/scrnatools-0.3-py3-none-any.whl (from https://pypi.org/simple/scrnatools/)
2023-10-10T00:46:16,642   Found link https://files.pythonhosted.org/packages/dc/71/f7c4a504f18aea7883f1a2c20cb96f240b79a123241d977fc9e5d8cbfbb9/scrnatools-0.3.tar.gz (from https://pypi.org/simple/scrnatools/), version: 0.3
2023-10-10T00:46:16,642   Skipping link: No binaries permitted for scrnatools: https://files.pythonhosted.org/packages/b1/21/3b86eb52b4e3d73769321bc487fe20a65c1f77938d60a329005c264d456a/scrnatools-0.3.1-py3-none-any.whl (from https://pypi.org/simple/scrnatools/)
2023-10-10T00:46:16,643   Found link https://files.pythonhosted.org/packages/21/a5/0ff0c91c772f97fd2864509a165d7197a6a9282f8ffdaf6d61b8903e5078/scrnatools-0.3.1.tar.gz (from https://pypi.org/simple/scrnatools/), version: 0.3.1
2023-10-10T00:46:16,643   Skipping link: No binaries permitted for scrnatools: https://files.pythonhosted.org/packages/5a/b9/4301bb3af93fbad5346076f99f3bf2032084dc8aa7a10400ea29dcc6da17/scrnatools-0.3.2-py3-none-any.whl (from https://pypi.org/simple/scrnatools/)
2023-10-10T00:46:16,644   Found link https://files.pythonhosted.org/packages/99/f3/49c57c6155217ba5b3300e5effdc89bfdfe9d6a75dbc3dc9e74b448eb0ab/scrnatools-0.3.2.tar.gz (from https://pypi.org/simple/scrnatools/), version: 0.3.2
2023-10-10T00:46:16,645   Skipping link: No binaries permitted for scrnatools: https://files.pythonhosted.org/packages/dd/d3/16068f47fff157da90ed07ff69a362316975de47a3a4fc17ba1d8d531e24/scrnatools-0.3.3-py3-none-any.whl (from https://pypi.org/simple/scrnatools/)
2023-10-10T00:46:16,645   Found link https://files.pythonhosted.org/packages/97/47/09b3c52a78062b9d27590d7566417d5ecb5c62778a263edf9c92ab045324/scrnatools-0.3.3.tar.gz (from https://pypi.org/simple/scrnatools/), version: 0.3.3
2023-10-10T00:46:16,646   Skipping link: No binaries permitted for scrnatools: https://files.pythonhosted.org/packages/11/f7/8deed827b0eb9e143150607b504d801e062c34544badb790766f441bf292/scrnatools-0.3.4-py3-none-any.whl (from https://pypi.org/simple/scrnatools/)
2023-10-10T00:46:16,646   Found link https://files.pythonhosted.org/packages/03/8d/09b674e0af6f22b0a512cfc54695b1924dd88851113933fb7c5f67e6fb49/scrnatools-0.3.4.tar.gz (from https://pypi.org/simple/scrnatools/), version: 0.3.4
2023-10-10T00:46:16,647   Skipping link: No binaries permitted for scrnatools: https://files.pythonhosted.org/packages/93/46/7d9ad46c42e0094ed7e958d19f681d4d50deb6029b3704cb528b4489583c/scrnatools-0.3.5-py3-none-any.whl (from https://pypi.org/simple/scrnatools/)
2023-10-10T00:46:16,648   Found link https://files.pythonhosted.org/packages/bb/ba/b82c839caa54d113425c924ae495c90e356e327d90f85f6c1b60bc840247/scrnatools-0.3.5.tar.gz (from https://pypi.org/simple/scrnatools/), version: 0.3.5
2023-10-10T00:46:16,648   Skipping link: No binaries permitted for scrnatools: https://files.pythonhosted.org/packages/0e/2a/cce8220aaaf528f51c086f60795c773feecdb44154285857d60164a4c54b/scrnatools-0.3.6-py3-none-any.whl (from https://pypi.org/simple/scrnatools/)
2023-10-10T00:46:16,649   Found link https://files.pythonhosted.org/packages/ed/39/f38bf4e306a31a6c30688837090e6b853f6938e5f12d76f384a143322d80/scrnatools-0.3.6.tar.gz (from https://pypi.org/simple/scrnatools/), version: 0.3.6
2023-10-10T00:46:16,649   Skipping link: No binaries permitted for scrnatools: https://files.pythonhosted.org/packages/4f/6f/2243a30637fdad1f48724073c15df07f83e334fb18573fde639879c70a7a/scrnatools-0.4-py3-none-any.whl (from https://pypi.org/simple/scrnatools/) (requires-python:>=3, <3.11)
2023-10-10T00:46:16,651   Found link https://files.pythonhosted.org/packages/d5/80/84a49ee09374a66008813d80c5cf36d20b716b1705d5076cbcac329cf5f5/scrnatools-0.4.tar.gz (from https://pypi.org/simple/scrnatools/) (requires-python:>=3, <3.11), version: 0.4
2023-10-10T00:46:16,652   Skipping link: No binaries permitted for scrnatools: https://files.pythonhosted.org/packages/b3/b1/a6d69c04e158128ce408bdbd01e7b1cb4048e113c7c0edef5fe65e2d2afa/scrnatools-1.0-py3-none-any.whl (from https://pypi.org/simple/scrnatools/) (requires-python:>=3, <3.11)
2023-10-10T00:46:16,653   Found link https://files.pythonhosted.org/packages/9f/39/af7b9cf8bd1b52e55b89281b271eb71602076087b7574be289d1d3eb8e93/scrnatools-1.0.tar.gz (from https://pypi.org/simple/scrnatools/) (requires-python:>=3, <3.11), version: 1.0
2023-10-10T00:46:16,654   Skipping link: No binaries permitted for scrnatools: https://files.pythonhosted.org/packages/ca/da/3b15c1db93ff2838210376ea80690366a6fe6a426c8998edc4f9e8cbc441/scrnatools-1.1-py3-none-any.whl (from https://pypi.org/simple/scrnatools/) (requires-python:>=3, <3.11)
2023-10-10T00:46:16,656   Found link https://files.pythonhosted.org/packages/f2/7c/01eff8771f3078b36fc9e88301e22766e090113267903f29a01c7a64144a/scrnatools-1.1.tar.gz (from https://pypi.org/simple/scrnatools/) (requires-python:>=3, <3.11), version: 1.1
2023-10-10T00:46:16,656   Skipping link: No binaries permitted for scrnatools: https://files.pythonhosted.org/packages/95/09/8c003a8a707ad5373d07187dd0a6e66b070ac575a9340a713d87a0330575/scrnatools-1.11-py3-none-any.whl (from https://pypi.org/simple/scrnatools/) (requires-python:>=3, <3.11)
2023-10-10T00:46:16,658   Found link https://files.pythonhosted.org/packages/08/80/67bf813af7f01ab77a20189c64311289383ec2add7e6f080b693cf091bca/scrnatools-1.11.tar.gz (from https://pypi.org/simple/scrnatools/) (requires-python:>=3, <3.11), version: 1.11
2023-10-10T00:46:16,659 Fetching project page and analyzing links: https://www.piwheels.org/simple/scrnatools/
2023-10-10T00:46:16,660 Getting page https://www.piwheels.org/simple/scrnatools/
2023-10-10T00:46:16,662 Found index url https://www.piwheels.org/simple/
2023-10-10T00:46:16,778 Fetched page https://www.piwheels.org/simple/scrnatools/ as text/html
2023-10-10T00:46:16,789   Skipping link: No binaries permitted for scrnatools: https://www.piwheels.org/simple/scrnatools/scrnatools-1.0-py3-none-any.whl#sha256=81296a3f8bdbdade6229aa0ac83ae1841bd86847d4002eddb7b2a8d0678d1266 (from https://www.piwheels.org/simple/scrnatools/) (requires-python:>=3, <3.11)
2023-10-10T00:46:16,790   Skipping link: No binaries permitted for scrnatools: https://www.piwheels.org/simple/scrnatools/scrnatools-0.4-py3-none-any.whl#sha256=c3c060711cde146ca9cb513838776dfee65267de87f9fac474da6c590cbb87a8 (from https://www.piwheels.org/simple/scrnatools/) (requires-python:>=3, <3.11)
2023-10-10T00:46:16,790   Skipping link: No binaries permitted for scrnatools: https://www.piwheels.org/simple/scrnatools/scrnatools-0.3.6-py3-none-any.whl#sha256=9d03608fac548243fb12d77be08869e2322241d2437c9597774dafa25d7c4838 (from https://www.piwheels.org/simple/scrnatools/)
2023-10-10T00:46:16,791   Skipping link: No binaries permitted for scrnatools: https://www.piwheels.org/simple/scrnatools/scrnatools-0.3.5-py3-none-any.whl#sha256=f3ae98818c49db4925ab7c3fc91facc55fe097a3ccacfeecd9eb00ad897b71d6 (from https://www.piwheels.org/simple/scrnatools/)
2023-10-10T00:46:16,792   Skipping link: No binaries permitted for scrnatools: https://www.piwheels.org/simple/scrnatools/scrnatools-0.3.4-py3-none-any.whl#sha256=ae851fc99a40c0f963ec13835a9558bb066d7bd87c65e781899249141a7f9a91 (from https://www.piwheels.org/simple/scrnatools/)
2023-10-10T00:46:16,793   Skipping link: No binaries permitted for scrnatools: https://www.piwheels.org/simple/scrnatools/scrnatools-0.3.3-py3-none-any.whl#sha256=e2d6b02ea388a1f8a6e6f36de1d5e98769efc3789bfc01f5cd20dc8cf8406251 (from https://www.piwheels.org/simple/scrnatools/)
2023-10-10T00:46:16,794   Skipping link: No binaries permitted for scrnatools: https://www.piwheels.org/simple/scrnatools/scrnatools-0.3.2-py3-none-any.whl#sha256=0d7580c32c616cafbc1e474cd072d48f86076755fcd2cedd019f943b039f2e1a (from https://www.piwheels.org/simple/scrnatools/)
2023-10-10T00:46:16,794   Skipping link: No binaries permitted for scrnatools: https://www.piwheels.org/simple/scrnatools/scrnatools-0.3.1-py3-none-any.whl#sha256=d5d324b586908469a147642464eaf3c4c89f8ad0410d5cc817a99ab9c5fbfce3 (from https://www.piwheels.org/simple/scrnatools/)
2023-10-10T00:46:16,795   Skipping link: No binaries permitted for scrnatools: https://www.piwheels.org/simple/scrnatools/scrnatools-0.3-py3-none-any.whl#sha256=e6222518dd6466b5c9f0687507c85fc5875c58c17bf0da445acba6c5e439f6b1 (from https://www.piwheels.org/simple/scrnatools/)
2023-10-10T00:46:16,796   Skipping link: No binaries permitted for scrnatools: https://www.piwheels.org/simple/scrnatools/scrnatools-0.2-py3-none-any.whl#sha256=46685db5cd6fa31af4128354c2b2b789bf1c46a2c736b4b2420a3813ff64cc3a (from https://www.piwheels.org/simple/scrnatools/)
2023-10-10T00:46:16,796   Skipping link: No binaries permitted for scrnatools: https://www.piwheels.org/simple/scrnatools/scrnatools-0.1-py3-none-any.whl#sha256=b0127121f779c4c0acbbe73fe73e2e0948cd988ab03e8c674702286d945d8e61 (from https://www.piwheels.org/simple/scrnatools/)
2023-10-10T00:46:16,797 Skipping link: not a file: https://www.piwheels.org/simple/scrnatools/
2023-10-10T00:46:16,798 Skipping link: not a file: https://pypi.org/simple/scrnatools/
2023-10-10T00:46:16,832 Given no hashes to check 1 links for project 'scrnatools': discarding no candidates
2023-10-10T00:46:16,861 Collecting scrnatools==1.1
2023-10-10T00:46:16,865   Created temporary directory: /tmp/pip-unpack-v6k7ue6o
2023-10-10T00:46:17,053   Downloading scrnatools-1.1.tar.gz (21 kB)
2023-10-10T00:46:17,232   Added scrnatools==1.1 from https://files.pythonhosted.org/packages/f2/7c/01eff8771f3078b36fc9e88301e22766e090113267903f29a01c7a64144a/scrnatools-1.1.tar.gz to build tracker '/tmp/pip-build-tracker-30ub3puu'
2023-10-10T00:46:17,237   Running setup.py (path:/tmp/pip-wheel-pxur5f_a/scrnatools_63504edbff4346d6a70c192c7d0dc256/setup.py) egg_info for package scrnatools
2023-10-10T00:46:17,238   Created temporary directory: /tmp/pip-pip-egg-info-23l2gtyl
2023-10-10T00:46:17,239   Preparing metadata (setup.py): started
2023-10-10T00:46:17,241   Running command python setup.py egg_info
2023-10-10T00:46:19,720   running egg_info
2023-10-10T00:46:19,725   creating /tmp/pip-pip-egg-info-23l2gtyl/scrnatools.egg-info
2023-10-10T00:46:19,781   writing /tmp/pip-pip-egg-info-23l2gtyl/scrnatools.egg-info/PKG-INFO
2023-10-10T00:46:19,786   writing dependency_links to /tmp/pip-pip-egg-info-23l2gtyl/scrnatools.egg-info/dependency_links.txt
2023-10-10T00:46:19,791   writing requirements to /tmp/pip-pip-egg-info-23l2gtyl/scrnatools.egg-info/requires.txt
2023-10-10T00:46:19,793   writing top-level names to /tmp/pip-pip-egg-info-23l2gtyl/scrnatools.egg-info/top_level.txt
2023-10-10T00:46:19,796   writing manifest file '/tmp/pip-pip-egg-info-23l2gtyl/scrnatools.egg-info/SOURCES.txt'
2023-10-10T00:46:19,986   reading manifest file '/tmp/pip-pip-egg-info-23l2gtyl/scrnatools.egg-info/SOURCES.txt'
2023-10-10T00:46:19,989   adding license file 'LICENSE.txt'
2023-10-10T00:46:19,996   writing manifest file '/tmp/pip-pip-egg-info-23l2gtyl/scrnatools.egg-info/SOURCES.txt'
2023-10-10T00:46:19,998   /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:745: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-10-10T00:46:19,998   !!

2023-10-10T00:46:19,999           ********************************************************************************
2023-10-10T00:46:20,000           Usage of dash-separated 'description-file' will not be supported in future
2023-10-10T00:46:20,000           versions. Please use the underscore name 'description_file' instead.

2023-10-10T00:46:20,001           This deprecation is overdue, please update your project and remove deprecated
2023-10-10T00:46:20,001           calls to avoid build errors in the future.

2023-10-10T00:46:20,002           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-10-10T00:46:20,003           ********************************************************************************

2023-10-10T00:46:20,003   !!
2023-10-10T00:46:20,004     opt = self.warn_dash_deprecation(opt, section)
2023-10-10T00:46:20,004   /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:745: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-10-10T00:46:20,005   !!

2023-10-10T00:46:20,006           ********************************************************************************
2023-10-10T00:46:20,006           Usage of dash-separated 'description-file' will not be supported in future
2023-10-10T00:46:20,007           versions. Please use the underscore name 'description_file' instead.

2023-10-10T00:46:20,007           This deprecation is overdue, please update your project and remove deprecated
2023-10-10T00:46:20,008           calls to avoid build errors in the future.

2023-10-10T00:46:20,009           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-10-10T00:46:20,009           ********************************************************************************

2023-10-10T00:46:20,010   !!
2023-10-10T00:46:20,010     opt = self.warn_dash_deprecation(opt, section)
2023-10-10T00:46:20,162   Preparing metadata (setup.py): finished with status 'done'
2023-10-10T00:46:20,174   Source in /tmp/pip-wheel-pxur5f_a/scrnatools_63504edbff4346d6a70c192c7d0dc256 has version 1.1, which satisfies requirement scrnatools==1.1 from https://files.pythonhosted.org/packages/f2/7c/01eff8771f3078b36fc9e88301e22766e090113267903f29a01c7a64144a/scrnatools-1.1.tar.gz
2023-10-10T00:46:20,176   Removed scrnatools==1.1 from https://files.pythonhosted.org/packages/f2/7c/01eff8771f3078b36fc9e88301e22766e090113267903f29a01c7a64144a/scrnatools-1.1.tar.gz from build tracker '/tmp/pip-build-tracker-30ub3puu'
2023-10-10T00:46:20,192 Created temporary directory: /tmp/pip-unpack-ny3tceq2
2023-10-10T00:46:20,194 Created temporary directory: /tmp/pip-unpack-65s2o4vv
2023-10-10T00:46:20,234 Building wheels for collected packages: scrnatools
2023-10-10T00:46:20,242   Created temporary directory: /tmp/pip-wheel-m4_e7rma
2023-10-10T00:46:20,243   Building wheel for scrnatools (setup.py): started
2023-10-10T00:46:20,245   Destination directory: /tmp/pip-wheel-m4_e7rma
2023-10-10T00:46:20,245   Running command python setup.py bdist_wheel
2023-10-10T00:46:21,412   /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:745: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-10-10T00:46:21,413   !!

2023-10-10T00:46:21,414           ********************************************************************************
2023-10-10T00:46:21,415           Usage of dash-separated 'description-file' will not be supported in future
2023-10-10T00:46:21,415           versions. Please use the underscore name 'description_file' instead.

2023-10-10T00:46:21,416           This deprecation is overdue, please update your project and remove deprecated
2023-10-10T00:46:21,416           calls to avoid build errors in the future.

2023-10-10T00:46:21,417           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-10-10T00:46:21,417           ********************************************************************************

2023-10-10T00:46:21,417   !!
2023-10-10T00:46:21,418     opt = self.warn_dash_deprecation(opt, section)
2023-10-10T00:46:22,567   /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:745: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-10-10T00:46:22,568   !!

2023-10-10T00:46:22,569           ********************************************************************************
2023-10-10T00:46:22,569           Usage of dash-separated 'description-file' will not be supported in future
2023-10-10T00:46:22,569           versions. Please use the underscore name 'description_file' instead.

2023-10-10T00:46:22,570           This deprecation is overdue, please update your project and remove deprecated
2023-10-10T00:46:22,570           calls to avoid build errors in the future.

2023-10-10T00:46:22,571           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-10-10T00:46:22,571           ********************************************************************************

2023-10-10T00:46:22,572   !!
2023-10-10T00:46:22,572     opt = self.warn_dash_deprecation(opt, section)
2023-10-10T00:46:22,651   running bdist_wheel
2023-10-10T00:46:22,820   running build
2023-10-10T00:46:22,821   running build_py
2023-10-10T00:46:22,884   creating build
2023-10-10T00:46:22,885   creating build/lib
2023-10-10T00:46:22,887   creating build/lib/scrnatools
2023-10-10T00:46:22,889   copying scrnatools/__init__.py -> build/lib/scrnatools
2023-10-10T00:46:22,893   copying scrnatools/_configs.py -> build/lib/scrnatools
2023-10-10T00:46:22,900   creating build/lib/scrnatools/tools
2023-10-10T00:46:22,902   copying scrnatools/tools/_create_cell_type_signature.py -> build/lib/scrnatools/tools
2023-10-10T00:46:22,906   copying scrnatools/tools/_read_kallisto_tcc_matrix.py -> build/lib/scrnatools/tools
2023-10-10T00:46:22,909   copying scrnatools/tools/_isoform_preprocessing.py -> build/lib/scrnatools/tools
2023-10-10T00:46:22,913   copying scrnatools/tools/_save_isoform_lookup_tables.py -> build/lib/scrnatools/tools
2023-10-10T00:46:22,917   copying scrnatools/tools/_get_expression_matrix.py -> build/lib/scrnatools/tools
2023-10-10T00:46:22,921   copying scrnatools/tools/_cluster_de.py -> build/lib/scrnatools/tools
2023-10-10T00:46:22,924   copying scrnatools/tools/__init__.py -> build/lib/scrnatools/tools
2023-10-10T00:46:22,927   copying scrnatools/tools/_load_isoform_lookup_tables.py -> build/lib/scrnatools/tools
2023-10-10T00:46:22,931   copying scrnatools/tools/_create_isoform_lookup_tables.py -> build/lib/scrnatools/tools
2023-10-10T00:46:22,935   copying scrnatools/tools/_log_density_ratio.py -> build/lib/scrnatools/tools
2023-10-10T00:46:22,938   copying scrnatools/tools/_cell_type_similarity.py -> build/lib/scrnatools/tools
2023-10-10T00:46:22,942   copying scrnatools/tools/_get_immgen_similarity_signatures.py -> build/lib/scrnatools/tools
2023-10-10T00:46:22,947   creating build/lib/scrnatools/qc
2023-10-10T00:46:22,949   copying scrnatools/qc/_scrublet.py -> build/lib/scrnatools/qc
2023-10-10T00:46:22,953   copying scrnatools/qc/_filter_cells.py -> build/lib/scrnatools/qc
2023-10-10T00:46:22,957   copying scrnatools/qc/__init__.py -> build/lib/scrnatools/qc
2023-10-10T00:46:22,961   creating build/lib/scrnatools/_utils
2023-10-10T00:46:22,963   copying scrnatools/_utils/_check_path.py -> build/lib/scrnatools/_utils
2023-10-10T00:46:22,967   copying scrnatools/_utils/_fill_array.py -> build/lib/scrnatools/_utils
2023-10-10T00:46:22,971   copying scrnatools/_utils/__init__.py -> build/lib/scrnatools/_utils
2023-10-10T00:46:22,974   copying scrnatools/_utils/_type_check.py -> build/lib/scrnatools/_utils
2023-10-10T00:46:22,979   creating build/lib/scrnatools/plotting
2023-10-10T00:46:22,981   copying scrnatools/plotting/_qc_plotting.py -> build/lib/scrnatools/plotting
2023-10-10T00:46:22,985   copying scrnatools/plotting/_gene_violinplot.py -> build/lib/scrnatools/plotting
2023-10-10T00:46:22,990   copying scrnatools/plotting/__init__.py -> build/lib/scrnatools/plotting
2023-10-10T00:46:22,993   copying scrnatools/plotting/_gene_heatmap.py -> build/lib/scrnatools/plotting
2023-10-10T00:46:22,997   copying scrnatools/plotting/_gene_embedding.py -> build/lib/scrnatools/plotting
2023-10-10T00:46:23,001   copying scrnatools/plotting/_gene_density_plot.py -> build/lib/scrnatools/plotting
2023-10-10T00:46:23,005   copying scrnatools/plotting/_isoform_qc_plot.py -> build/lib/scrnatools/plotting
2023-10-10T00:46:23,074   /usr/local/lib/python3.7/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2023-10-10T00:46:23,075   !!

2023-10-10T00:46:23,076           ********************************************************************************
2023-10-10T00:46:23,076           Please avoid running ``setup.py`` directly.
2023-10-10T00:46:23,076           Instead, use pypa/build, pypa/installer or other
2023-10-10T00:46:23,077           standards-based tools.

2023-10-10T00:46:23,078           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2023-10-10T00:46:23,078           ********************************************************************************

2023-10-10T00:46:23,079   !!
2023-10-10T00:46:23,079     self.initialize_options()
2023-10-10T00:46:23,130   installing to build/bdist.linux-armv7l/wheel
2023-10-10T00:46:23,130   running install
2023-10-10T00:46:23,190   running install_lib
2023-10-10T00:46:23,247   creating build/bdist.linux-armv7l
2023-10-10T00:46:23,248   creating build/bdist.linux-armv7l/wheel
2023-10-10T00:46:23,251   creating build/bdist.linux-armv7l/wheel/scrnatools
2023-10-10T00:46:23,254   creating build/bdist.linux-armv7l/wheel/scrnatools/tools
2023-10-10T00:46:23,256   copying build/lib/scrnatools/tools/_create_cell_type_signature.py -> build/bdist.linux-armv7l/wheel/scrnatools/tools
2023-10-10T00:46:23,260   copying build/lib/scrnatools/tools/_read_kallisto_tcc_matrix.py -> build/bdist.linux-armv7l/wheel/scrnatools/tools
2023-10-10T00:46:23,264   copying build/lib/scrnatools/tools/_isoform_preprocessing.py -> build/bdist.linux-armv7l/wheel/scrnatools/tools
2023-10-10T00:46:23,267   copying build/lib/scrnatools/tools/_save_isoform_lookup_tables.py -> build/bdist.linux-armv7l/wheel/scrnatools/tools
2023-10-10T00:46:23,271   copying build/lib/scrnatools/tools/_get_expression_matrix.py -> build/bdist.linux-armv7l/wheel/scrnatools/tools
2023-10-10T00:46:23,274   copying build/lib/scrnatools/tools/_cluster_de.py -> build/bdist.linux-armv7l/wheel/scrnatools/tools
2023-10-10T00:46:23,278   copying build/lib/scrnatools/tools/__init__.py -> build/bdist.linux-armv7l/wheel/scrnatools/tools
2023-10-10T00:46:23,282   copying build/lib/scrnatools/tools/_load_isoform_lookup_tables.py -> build/bdist.linux-armv7l/wheel/scrnatools/tools
2023-10-10T00:46:23,285   copying build/lib/scrnatools/tools/_create_isoform_lookup_tables.py -> build/bdist.linux-armv7l/wheel/scrnatools/tools
2023-10-10T00:46:23,289   copying build/lib/scrnatools/tools/_log_density_ratio.py -> build/bdist.linux-armv7l/wheel/scrnatools/tools
2023-10-10T00:46:23,292   copying build/lib/scrnatools/tools/_cell_type_similarity.py -> build/bdist.linux-armv7l/wheel/scrnatools/tools
2023-10-10T00:46:23,296   copying build/lib/scrnatools/tools/_get_immgen_similarity_signatures.py -> build/bdist.linux-armv7l/wheel/scrnatools/tools
2023-10-10T00:46:23,301   creating build/bdist.linux-armv7l/wheel/scrnatools/qc
2023-10-10T00:46:23,303   copying build/lib/scrnatools/qc/_scrublet.py -> build/bdist.linux-armv7l/wheel/scrnatools/qc
2023-10-10T00:46:23,306   copying build/lib/scrnatools/qc/_filter_cells.py -> build/bdist.linux-armv7l/wheel/scrnatools/qc
2023-10-10T00:46:23,310   copying build/lib/scrnatools/qc/__init__.py -> build/bdist.linux-armv7l/wheel/scrnatools/qc
2023-10-10T00:46:23,314   creating build/bdist.linux-armv7l/wheel/scrnatools/_utils
2023-10-10T00:46:23,316   copying build/lib/scrnatools/_utils/_check_path.py -> build/bdist.linux-armv7l/wheel/scrnatools/_utils
2023-10-10T00:46:23,320   copying build/lib/scrnatools/_utils/_fill_array.py -> build/bdist.linux-armv7l/wheel/scrnatools/_utils
2023-10-10T00:46:23,323   copying build/lib/scrnatools/_utils/__init__.py -> build/bdist.linux-armv7l/wheel/scrnatools/_utils
2023-10-10T00:46:23,326   copying build/lib/scrnatools/_utils/_type_check.py -> build/bdist.linux-armv7l/wheel/scrnatools/_utils
2023-10-10T00:46:23,331   creating build/bdist.linux-armv7l/wheel/scrnatools/plotting
2023-10-10T00:46:23,333   copying build/lib/scrnatools/plotting/_qc_plotting.py -> build/bdist.linux-armv7l/wheel/scrnatools/plotting
2023-10-10T00:46:23,337   copying build/lib/scrnatools/plotting/_gene_violinplot.py -> build/bdist.linux-armv7l/wheel/scrnatools/plotting
2023-10-10T00:46:23,341   copying build/lib/scrnatools/plotting/__init__.py -> build/bdist.linux-armv7l/wheel/scrnatools/plotting
2023-10-10T00:46:23,344   copying build/lib/scrnatools/plotting/_gene_heatmap.py -> build/bdist.linux-armv7l/wheel/scrnatools/plotting
2023-10-10T00:46:23,348   copying build/lib/scrnatools/plotting/_gene_embedding.py -> build/bdist.linux-armv7l/wheel/scrnatools/plotting
2023-10-10T00:46:23,352   copying build/lib/scrnatools/plotting/_gene_density_plot.py -> build/bdist.linux-armv7l/wheel/scrnatools/plotting
2023-10-10T00:46:23,355   copying build/lib/scrnatools/plotting/_isoform_qc_plot.py -> build/bdist.linux-armv7l/wheel/scrnatools/plotting
2023-10-10T00:46:23,359   copying build/lib/scrnatools/__init__.py -> build/bdist.linux-armv7l/wheel/scrnatools
2023-10-10T00:46:23,362   copying build/lib/scrnatools/_configs.py -> build/bdist.linux-armv7l/wheel/scrnatools
2023-10-10T00:46:23,366   running install_egg_info
2023-10-10T00:46:23,505   running egg_info
2023-10-10T00:46:23,559   writing scrnatools.egg-info/PKG-INFO
2023-10-10T00:46:23,563   writing dependency_links to scrnatools.egg-info/dependency_links.txt
2023-10-10T00:46:23,567   writing requirements to scrnatools.egg-info/requires.txt
2023-10-10T00:46:23,569   writing top-level names to scrnatools.egg-info/top_level.txt
2023-10-10T00:46:23,637   reading manifest file 'scrnatools.egg-info/SOURCES.txt'
2023-10-10T00:46:23,642   adding license file 'LICENSE.txt'
2023-10-10T00:46:23,650   writing manifest file 'scrnatools.egg-info/SOURCES.txt'
2023-10-10T00:46:23,653   Copying scrnatools.egg-info to build/bdist.linux-armv7l/wheel/scrnatools-1.1-py3.7.egg-info
2023-10-10T00:46:23,672   running install_scripts
2023-10-10T00:46:23,710   adding license file "LICENSE.txt" (matched pattern "LICENSE.txt")
2023-10-10T00:46:23,716   creating build/bdist.linux-armv7l/wheel/scrnatools-1.1.dist-info/WHEEL
2023-10-10T00:46:23,721   creating '/tmp/pip-wheel-m4_e7rma/scrnatools-1.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-10-10T00:46:23,726   adding 'scrnatools/__init__.py'
2023-10-10T00:46:23,730   adding 'scrnatools/_configs.py'
2023-10-10T00:46:23,734   adding 'scrnatools/_utils/__init__.py'
2023-10-10T00:46:23,736   adding 'scrnatools/_utils/_check_path.py'
2023-10-10T00:46:23,739   adding 'scrnatools/_utils/_fill_array.py'
2023-10-10T00:46:23,742   adding 'scrnatools/_utils/_type_check.py'
2023-10-10T00:46:23,745   adding 'scrnatools/plotting/__init__.py'
2023-10-10T00:46:23,749   adding 'scrnatools/plotting/_gene_density_plot.py'
2023-10-10T00:46:23,752   adding 'scrnatools/plotting/_gene_embedding.py'
2023-10-10T00:46:23,756   adding 'scrnatools/plotting/_gene_heatmap.py'
2023-10-10T00:46:23,760   adding 'scrnatools/plotting/_gene_violinplot.py'
2023-10-10T00:46:23,763   adding 'scrnatools/plotting/_isoform_qc_plot.py'
2023-10-10T00:46:23,766   adding 'scrnatools/plotting/_qc_plotting.py'
2023-10-10T00:46:23,770   adding 'scrnatools/qc/__init__.py'
2023-10-10T00:46:23,772   adding 'scrnatools/qc/_filter_cells.py'
2023-10-10T00:46:23,775   adding 'scrnatools/qc/_scrublet.py'
2023-10-10T00:46:23,780   adding 'scrnatools/tools/__init__.py'
2023-10-10T00:46:23,783   adding 'scrnatools/tools/_cell_type_similarity.py'
2023-10-10T00:46:23,786   adding 'scrnatools/tools/_cluster_de.py'
2023-10-10T00:46:23,789   adding 'scrnatools/tools/_create_cell_type_signature.py'
2023-10-10T00:46:23,792   adding 'scrnatools/tools/_create_isoform_lookup_tables.py'
2023-10-10T00:46:23,795   adding 'scrnatools/tools/_get_expression_matrix.py'
2023-10-10T00:46:23,798   adding 'scrnatools/tools/_get_immgen_similarity_signatures.py'
2023-10-10T00:46:23,800   adding 'scrnatools/tools/_isoform_preprocessing.py'
2023-10-10T00:46:23,803   adding 'scrnatools/tools/_load_isoform_lookup_tables.py'
2023-10-10T00:46:23,806   adding 'scrnatools/tools/_log_density_ratio.py'
2023-10-10T00:46:23,809   adding 'scrnatools/tools/_read_kallisto_tcc_matrix.py'
2023-10-10T00:46:23,811   adding 'scrnatools/tools/_save_isoform_lookup_tables.py'
2023-10-10T00:46:23,816   adding 'scrnatools-1.1.dist-info/LICENSE.txt'
2023-10-10T00:46:23,819   adding 'scrnatools-1.1.dist-info/METADATA'
2023-10-10T00:46:23,821   adding 'scrnatools-1.1.dist-info/WHEEL'
2023-10-10T00:46:23,822   adding 'scrnatools-1.1.dist-info/top_level.txt'
2023-10-10T00:46:23,824   adding 'scrnatools-1.1.dist-info/RECORD'
2023-10-10T00:46:23,828   removing build/bdist.linux-armv7l/wheel
2023-10-10T00:46:24,019   Building wheel for scrnatools (setup.py): finished with status 'done'
2023-10-10T00:46:24,027   Created wheel for scrnatools: filename=scrnatools-1.1-py3-none-any.whl size=33985 sha256=57dc1df541783b3a88b993f3dc2cb96a60c24a411f611d710a83fd31436a9438
2023-10-10T00:46:24,029   Stored in directory: /tmp/pip-ephem-wheel-cache-aays2su8/wheels/bc/02/93/f792061899310a6b6a9f46f6097c51a549bb85ed2425f09b81
2023-10-10T00:46:24,056 Successfully built scrnatools
2023-10-10T00:46:24,066 Removed build tracker: '/tmp/pip-build-tracker-30ub3puu'