2023-10-10T16:28:13,734 Created temporary directory: /tmp/pip-build-tracker-ur0rtcp8
2023-10-10T16:28:13,736 Initialized build tracking at /tmp/pip-build-tracker-ur0rtcp8
2023-10-10T16:28:13,736 Created build tracker: /tmp/pip-build-tracker-ur0rtcp8
2023-10-10T16:28:13,737 Entered build tracker: /tmp/pip-build-tracker-ur0rtcp8
2023-10-10T16:28:13,738 Created temporary directory: /tmp/pip-wheel-kwu2005w
2023-10-10T16:28:13,741 Created temporary directory: /tmp/pip-ephem-wheel-cache-8bo2dxru
2023-10-10T16:28:13,763 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-10-10T16:28:13,767 2 location(s) to search for versions of scregat:
2023-10-10T16:28:13,767 * https://pypi.org/simple/scregat/
2023-10-10T16:28:13,767 * https://www.piwheels.org/simple/scregat/
2023-10-10T16:28:13,768 Fetching project page and analyzing links: https://pypi.org/simple/scregat/
2023-10-10T16:28:13,769 Getting page https://pypi.org/simple/scregat/
2023-10-10T16:28:13,770 Found index url https://pypi.org/simple/
2023-10-10T16:28:13,990 Fetched page https://pypi.org/simple/scregat/ as application/vnd.pypi.simple.v1+json
2023-10-10T16:28:13,994   Found link https://files.pythonhosted.org/packages/f8/4f/eaf93a3e08f464ed5c50e228ec2691927b1188ae17119e7dfd957e0985ed/scReGAT-0.0.0.tar.gz (from https://pypi.org/simple/scregat/) (requires-python:>=3.8.3), version: 0.0.0
2023-10-10T16:28:13,995   Found link https://files.pythonhosted.org/packages/13/da/a41a9f3b020c4a3d54620420d14bfd6f7002656eb5ad638bb63e1e1442df/scReGAT-0.0.1.tar.gz (from https://pypi.org/simple/scregat/) (requires-python:>=3.8.3), version: 0.0.1
2023-10-10T16:28:13,996   Skipping link: No binaries permitted for scregat: https://files.pythonhosted.org/packages/c6/db/c6760a743b3f7786b11a72f96256275a160bc1375cf340a9559cd23f22f0/scReGAT-0.0.2-py3-none-any.whl (from https://pypi.org/simple/scregat/) (requires-python:>=3.8.3)
2023-10-10T16:28:13,997   Found link https://files.pythonhosted.org/packages/48/8f/704eeb7f0e5d711be746f06bf8318c8341eb281ab9abb3caddd0a7e442eb/scReGAT-0.0.2.tar.gz (from https://pypi.org/simple/scregat/) (requires-python:>=3.8.3), version: 0.0.2
2023-10-10T16:28:13,997   Skipping link: No binaries permitted for scregat: https://files.pythonhosted.org/packages/e0/96/93d34c57b4d05b6c84523115b4b138d16d5bc0c7ce6d45b2f3fe3ddb26df/scReGAT-0.0.3-py3-none-any.whl (from https://pypi.org/simple/scregat/) (requires-python:>=3.8.3)
2023-10-10T16:28:13,998   Found link https://files.pythonhosted.org/packages/12/0b/302bdebeab774610951a502c1a1f09f5b725e8bce4ab7f2868369675b9cb/scReGAT-0.0.3.tar.gz (from https://pypi.org/simple/scregat/) (requires-python:>=3.8.3), version: 0.0.3
2023-10-10T16:28:13,999   Skipping link: No binaries permitted for scregat: https://files.pythonhosted.org/packages/d8/4c/66c7ec7cba75964503e8145b95a3a82903dd5655a64ba8c1fdb6a8a2c4b7/scReGAT-0.0.4-py3-none-any.whl (from https://pypi.org/simple/scregat/) (requires-python:>=3.8.3)
2023-10-10T16:28:14,000   Found link https://files.pythonhosted.org/packages/fb/c0/9b74442dd08c1c4447c2431ac8d3fd1d04543a85bd0a358e5fdc1fd432bb/scReGAT-0.0.4.tar.gz (from https://pypi.org/simple/scregat/) (requires-python:>=3.8.3), version: 0.0.4
2023-10-10T16:28:14,001   Skipping link: No binaries permitted for scregat: https://files.pythonhosted.org/packages/a5/6f/5c2f2d88ba750a79318bdacf9646d1aed0a8cbd9560cc1048c2f4439b6d2/scReGAT-0.0.5-py2.py3-none-any.whl (from https://pypi.org/simple/scregat/) (requires-python:>=3.8.3)
2023-10-10T16:28:14,002   Skipping link: No binaries permitted for scregat: https://files.pythonhosted.org/packages/4b/70/92eb54994ca6b3bac49a4b456c1d788011e6cd599e58ad97178052ff6cc1/scReGAT-0.0.5-py3-none-any.whl (from https://pypi.org/simple/scregat/) (requires-python:>=3.8.3)
2023-10-10T16:28:14,002   Found link https://files.pythonhosted.org/packages/91/b7/66521bd778221cda34dead17104e7998e8ce19d22d4263772d5f1c90e1fc/scReGAT-0.0.5.tar.gz (from https://pypi.org/simple/scregat/) (requires-python:>=3.8.3), version: 0.0.5
2023-10-10T16:28:14,003   Skipping link: No binaries permitted for scregat: https://files.pythonhosted.org/packages/24/51/48b7b603b548f5195bfc44f53ccdda3fa21000a9a9fd7712206714648bf2/scReGAT-0.0.6-py3-none-any.whl (from https://pypi.org/simple/scregat/) (requires-python:>=3.8.3)
2023-10-10T16:28:14,004   Found link https://files.pythonhosted.org/packages/d5/c1/191f930b8776f2e6be5c73e889511eaaca2e2b66b8dad29bea29f010915a/scReGAT-0.0.6.tar.gz (from https://pypi.org/simple/scregat/) (requires-python:>=3.8.3), version: 0.0.6
2023-10-10T16:28:14,007 Fetching project page and analyzing links: https://www.piwheels.org/simple/scregat/
2023-10-10T16:28:14,007 Getting page https://www.piwheels.org/simple/scregat/
2023-10-10T16:28:14,009 Found index url https://www.piwheels.org/simple/
2023-10-10T16:28:14,183 Fetched page https://www.piwheels.org/simple/scregat/ as text/html
2023-10-10T16:28:14,186   Skipping link: No binaries permitted for scregat: https://www.piwheels.org/simple/scregat/scReGAT-0.0.5-py3-none-any.whl#sha256=edcc1652c54946586a8a1ea5af078971d4e922e5838419fbd328b764b30000a0 (from https://www.piwheels.org/simple/scregat/) (requires-python:>=3.8.3)
2023-10-10T16:28:14,187   Skipping link: No binaries permitted for scregat: https://www.piwheels.org/simple/scregat/scReGAT-0.0.4-py3-none-any.whl#sha256=e6179a3dde310d89e9894559477faaa46f27675f0ebfb0094041067aa4eb5ba3 (from https://www.piwheels.org/simple/scregat/) (requires-python:>=3.8.3)
2023-10-10T16:28:14,187   Skipping link: No binaries permitted for scregat: https://www.piwheels.org/simple/scregat/scReGAT-0.0.3-py3-none-any.whl#sha256=8e80e88da41da67f53f4a20ca33aaa8bf6b6465168b687f504562e43e2432f81 (from https://www.piwheels.org/simple/scregat/) (requires-python:>=3.8.3)
2023-10-10T16:28:14,188   Skipping link: No binaries permitted for scregat: https://www.piwheels.org/simple/scregat/scReGAT-0.0.2-py3-none-any.whl#sha256=9f09b5f38b60192d3c43c5e2b7107670c01579bafaab47b4b958a18b0446c44b (from https://www.piwheels.org/simple/scregat/) (requires-python:>=3.8.3)
2023-10-10T16:28:14,188   Skipping link: No binaries permitted for scregat: https://www.piwheels.org/simple/scregat/scReGAT-0.0.1-py3-none-any.whl#sha256=a88733338ebb0613fc28499904b1258c9d69ed8ccf57d7c9daf8fb4fa1d4956e (from https://www.piwheels.org/simple/scregat/) (requires-python:>=3.8.3)
2023-10-10T16:28:14,189   Skipping link: No binaries permitted for scregat: https://www.piwheels.org/simple/scregat/scReGAT-0.0.0-py3-none-any.whl#sha256=1bed380ca2dcc001f58e4fedd555d689349eebc7243c0bc01ec33bfa09589c97 (from https://www.piwheels.org/simple/scregat/) (requires-python:>=3.8.3)
2023-10-10T16:28:14,190 Skipping link: not a file: https://www.piwheels.org/simple/scregat/
2023-10-10T16:28:14,190 Skipping link: not a file: https://pypi.org/simple/scregat/
2023-10-10T16:28:14,209 Given no hashes to check 1 links for project 'scregat': discarding no candidates
2023-10-10T16:28:14,227 Collecting scregat==0.0.6
2023-10-10T16:28:14,229   Created temporary directory: /tmp/pip-unpack-qnin0izx
2023-10-10T16:28:14,449   Downloading scReGAT-0.0.6.tar.gz (102.1 MB)
2023-10-10T16:28:51,777   Added scregat==0.0.6 from https://files.pythonhosted.org/packages/d5/c1/191f930b8776f2e6be5c73e889511eaaca2e2b66b8dad29bea29f010915a/scReGAT-0.0.6.tar.gz to build tracker '/tmp/pip-build-tracker-ur0rtcp8'
2023-10-10T16:28:51,780   Running setup.py (path:/tmp/pip-wheel-kwu2005w/scregat_0765969037074fc89a4596fb2034e555/setup.py) egg_info for package scregat
2023-10-10T16:28:51,781   Created temporary directory: /tmp/pip-pip-egg-info-_8bmhm03
2023-10-10T16:28:51,781   Preparing metadata (setup.py): started
2023-10-10T16:28:51,782   Running command python setup.py egg_info
2023-10-10T16:28:52,807   running egg_info
2023-10-10T16:28:52,809   creating /tmp/pip-pip-egg-info-_8bmhm03/scReGAT.egg-info
2023-10-10T16:28:52,832   writing /tmp/pip-pip-egg-info-_8bmhm03/scReGAT.egg-info/PKG-INFO
2023-10-10T16:28:52,835   writing dependency_links to /tmp/pip-pip-egg-info-_8bmhm03/scReGAT.egg-info/dependency_links.txt
2023-10-10T16:28:52,837   writing requirements to /tmp/pip-pip-egg-info-_8bmhm03/scReGAT.egg-info/requires.txt
2023-10-10T16:28:52,838   writing top-level names to /tmp/pip-pip-egg-info-_8bmhm03/scReGAT.egg-info/top_level.txt
2023-10-10T16:28:52,840   writing manifest file '/tmp/pip-pip-egg-info-_8bmhm03/scReGAT.egg-info/SOURCES.txt'
2023-10-10T16:28:52,915   reading manifest file '/tmp/pip-pip-egg-info-_8bmhm03/scReGAT.egg-info/SOURCES.txt'
2023-10-10T16:28:52,918   writing manifest file '/tmp/pip-pip-egg-info-_8bmhm03/scReGAT.egg-info/SOURCES.txt'
2023-10-10T16:28:53,024   Preparing metadata (setup.py): finished with status 'done'
2023-10-10T16:28:53,027   Source in /tmp/pip-wheel-kwu2005w/scregat_0765969037074fc89a4596fb2034e555 has version 0.0.6, which satisfies requirement scregat==0.0.6 from https://files.pythonhosted.org/packages/d5/c1/191f930b8776f2e6be5c73e889511eaaca2e2b66b8dad29bea29f010915a/scReGAT-0.0.6.tar.gz
2023-10-10T16:28:53,028   Removed scregat==0.0.6 from https://files.pythonhosted.org/packages/d5/c1/191f930b8776f2e6be5c73e889511eaaca2e2b66b8dad29bea29f010915a/scReGAT-0.0.6.tar.gz from build tracker '/tmp/pip-build-tracker-ur0rtcp8'
2023-10-10T16:28:53,034 Created temporary directory: /tmp/pip-unpack-itgpu9rh
2023-10-10T16:28:53,035 Created temporary directory: /tmp/pip-unpack-x44n8k27
2023-10-10T16:28:53,056 Building wheels for collected packages: scregat
2023-10-10T16:28:53,060   Created temporary directory: /tmp/pip-wheel-6h5wirb4
2023-10-10T16:28:53,060   Building wheel for scregat (setup.py): started
2023-10-10T16:28:53,062   Destination directory: /tmp/pip-wheel-6h5wirb4
2023-10-10T16:28:53,062   Running command python setup.py bdist_wheel
2023-10-10T16:28:54,063   running bdist_wheel
2023-10-10T16:28:54,156   running build
2023-10-10T16:28:54,157   running build_py
2023-10-10T16:28:54,182   creating build
2023-10-10T16:28:54,183   creating build/lib
2023-10-10T16:28:54,183   creating build/lib/example
2023-10-10T16:28:54,185   copying example/__init__.py -> build/lib/example
2023-10-10T16:28:54,187   creating build/lib/scregat
2023-10-10T16:28:54,188   copying scregat/model.py -> build/lib/scregat
2023-10-10T16:28:54,190   copying scregat/data_process.py -> build/lib/scregat
2023-10-10T16:28:54,193   copying scregat/__init__.py -> build/lib/scregat
2023-10-10T16:28:54,194   running egg_info
2023-10-10T16:28:54,248   writing scReGAT.egg-info/PKG-INFO
2023-10-10T16:28:54,251   writing dependency_links to scReGAT.egg-info/dependency_links.txt
2023-10-10T16:28:54,253   writing requirements to scReGAT.egg-info/requires.txt
2023-10-10T16:28:54,254   writing top-level names to scReGAT.egg-info/top_level.txt
2023-10-10T16:28:54,281   reading manifest file 'scReGAT.egg-info/SOURCES.txt'
2023-10-10T16:28:54,284   writing manifest file 'scReGAT.egg-info/SOURCES.txt'
2023-10-10T16:28:54,286   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'scregat.data' is absent from the `packages` configuration.
2023-10-10T16:28:54,287   !!

2023-10-10T16:28:54,288           ********************************************************************************
2023-10-10T16:28:54,288           ############################
2023-10-10T16:28:54,289           # Package would be ignored #
2023-10-10T16:28:54,289           ############################
2023-10-10T16:28:54,290           Python recognizes 'scregat.data' as an importable package[^1],
2023-10-10T16:28:54,290           but it is absent from setuptools' `packages` configuration.

2023-10-10T16:28:54,291           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-10T16:28:54,292           package, please make sure that 'scregat.data' is explicitly added
2023-10-10T16:28:54,292           to the `packages` configuration field.

2023-10-10T16:28:54,293           Alternatively, you can also rely on setuptools' discovery methods
2023-10-10T16:28:54,294           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-10T16:28:54,295           instead of `find_packages(...)`/`find:`).

2023-10-10T16:28:54,296           You can read more about "package discovery" on setuptools documentation page:

2023-10-10T16:28:54,297           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-10T16:28:54,298           If you don't want 'scregat.data' to be distributed and are
2023-10-10T16:28:54,298           already explicitly excluding 'scregat.data' via
2023-10-10T16:28:54,299           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-10T16:28:54,299           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-10T16:28:54,300           combination with a more fine grained `package-data` configuration.

2023-10-10T16:28:54,300           You can read more about "package data files" on setuptools documentation page:

2023-10-10T16:28:54,301           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-10T16:28:54,302           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-10T16:28:54,303                 even if it does not contain any `.py` files.
2023-10-10T16:28:54,303                 On the other hand, currently there is no concept of package data
2023-10-10T16:28:54,304                 directory, all directories are treated like packages.
2023-10-10T16:28:54,304           ********************************************************************************

2023-10-10T16:28:54,305   !!
2023-10-10T16:28:54,305     check.warn(importable)
2023-10-10T16:28:54,306   creating build/lib/scregat/data
2023-10-10T16:28:54,306   copying scregat/data/PO.txt -> build/lib/scregat/data
2023-10-10T16:28:56,251   copying scregat/data/PP.txt -> build/lib/scregat/data
2023-10-10T16:28:57,061   copying scregat/data/all_tissue_SNP_Gene.txt -> build/lib/scregat/data
2023-10-10T16:29:16,739   copying scregat/data/genes.protein.tss.tsv -> build/lib/scregat/data
2023-10-10T16:29:16,753   copying scregat/data/hg38.chrom.sizes -> build/lib/scregat/data
2023-10-10T16:29:16,756   copying scregat/data/trrust_rawdata.human.tsv -> build/lib/scregat/data
2023-10-10T16:29:16,786   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2023-10-10T16:29:16,787   !!

2023-10-10T16:29:16,789           ********************************************************************************
2023-10-10T16:29:16,789           Please avoid running ``setup.py`` directly.
2023-10-10T16:29:16,790           Instead, use pypa/build, pypa/installer or other
2023-10-10T16:29:16,790           standards-based tools.

2023-10-10T16:29:16,791           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2023-10-10T16:29:16,792           ********************************************************************************

2023-10-10T16:29:16,793   !!
2023-10-10T16:29:16,793     self.initialize_options()
2023-10-10T16:29:16,811   installing to build/bdist.linux-armv7l/wheel
2023-10-10T16:29:16,812   running install
2023-10-10T16:29:16,835   running install_lib
2023-10-10T16:29:16,859   creating build/bdist.linux-armv7l
2023-10-10T16:29:16,860   creating build/bdist.linux-armv7l/wheel
2023-10-10T16:29:16,861   creating build/bdist.linux-armv7l/wheel/example
2023-10-10T16:29:16,862   copying build/lib/example/__init__.py -> build/bdist.linux-armv7l/wheel/example
2023-10-10T16:29:16,864   creating build/bdist.linux-armv7l/wheel/scregat
2023-10-10T16:29:16,865   copying build/lib/scregat/model.py -> build/bdist.linux-armv7l/wheel/scregat
2023-10-10T16:29:16,868   copying build/lib/scregat/data_process.py -> build/bdist.linux-armv7l/wheel/scregat
2023-10-10T16:29:16,870   copying build/lib/scregat/__init__.py -> build/bdist.linux-armv7l/wheel/scregat
2023-10-10T16:29:16,873   creating build/bdist.linux-armv7l/wheel/scregat/data
2023-10-10T16:29:16,874   copying build/lib/scregat/data/all_tissue_SNP_Gene.txt -> build/bdist.linux-armv7l/wheel/scregat/data
2023-10-10T16:29:39,115   copying build/lib/scregat/data/trrust_rawdata.human.tsv -> build/bdist.linux-armv7l/wheel/scregat/data
2023-10-10T16:29:39,125   copying build/lib/scregat/data/PO.txt -> build/bdist.linux-armv7l/wheel/scregat/data
2023-10-10T16:29:40,155   copying build/lib/scregat/data/genes.protein.tss.tsv -> build/bdist.linux-armv7l/wheel/scregat/data
2023-10-10T16:29:40,176   copying build/lib/scregat/data/PP.txt -> build/bdist.linux-armv7l/wheel/scregat/data
2023-10-10T16:29:40,228   copying build/lib/scregat/data/hg38.chrom.sizes -> build/bdist.linux-armv7l/wheel/scregat/data
2023-10-10T16:29:40,231   running install_egg_info
2023-10-10T16:29:40,262   Copying scReGAT.egg-info to build/bdist.linux-armv7l/wheel/scReGAT-0.0.6-py3.11.egg-info
2023-10-10T16:29:40,272   running install_scripts
2023-10-10T16:29:40,286   creating build/bdist.linux-armv7l/wheel/scReGAT-0.0.6.dist-info/WHEEL
2023-10-10T16:29:40,288   creating '/tmp/pip-wheel-6h5wirb4/scReGAT-0.0.6-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-10-10T16:29:40,291   adding 'example/__init__.py'
2023-10-10T16:29:40,293   adding 'scregat/__init__.py'
2023-10-10T16:29:40,297   adding 'scregat/data_process.py'
2023-10-10T16:29:40,300   adding 'scregat/model.py'
2023-10-10T16:29:47,408   adding 'scregat/data/PO.txt'
2023-10-10T16:29:48,683   adding 'scregat/data/PP.txt'
2023-10-10T16:31:07,118   adding 'scregat/data/all_tissue_SNP_Gene.txt'
2023-10-10T16:31:13,620   adding 'scregat/data/genes.protein.tss.tsv'
2023-10-10T16:31:13,630   adding 'scregat/data/hg38.chrom.sizes'
2023-10-10T16:31:13,675   adding 'scregat/data/trrust_rawdata.human.tsv'
2023-10-10T16:31:13,680   adding 'scReGAT-0.0.6.dist-info/METADATA'
2023-10-10T16:31:13,681   adding 'scReGAT-0.0.6.dist-info/WHEEL'
2023-10-10T16:31:13,682   adding 'scReGAT-0.0.6.dist-info/top_level.txt'
2023-10-10T16:31:13,684   adding 'scReGAT-0.0.6.dist-info/RECORD'
2023-10-10T16:31:13,689   removing build/bdist.linux-armv7l/wheel
2023-10-10T16:31:14,158   Building wheel for scregat (setup.py): finished with status 'done'
2023-10-10T16:31:15,343   Created wheel for scregat: filename=scReGAT-0.0.6-py3-none-any.whl size=102312806 sha256=13744b58584023a6f2f47ea68ce6e902f2ddde4a9f9cfc342cf3e5493687b424
2023-10-10T16:31:15,344   Stored in directory: /tmp/pip-ephem-wheel-cache-8bo2dxru/wheels/91/5f/ad/cac9b61100fe0e633e107129f559f3a8f6c9c57a5048d04dbe
2023-10-10T16:31:15,388 Successfully built scregat
2023-10-10T16:31:17,764 Removed build tracker: '/tmp/pip-build-tracker-ur0rtcp8'