2023-10-10T18:48:45,977 Created temporary directory: /tmp/pip-build-tracker-mvjr_pqx 2023-10-10T18:48:45,978 Initialized build tracking at /tmp/pip-build-tracker-mvjr_pqx 2023-10-10T18:48:45,979 Created build tracker: /tmp/pip-build-tracker-mvjr_pqx 2023-10-10T18:48:45,979 Entered build tracker: /tmp/pip-build-tracker-mvjr_pqx 2023-10-10T18:48:45,980 Created temporary directory: /tmp/pip-wheel-_pp_6c70 2023-10-10T18:48:45,983 Created temporary directory: /tmp/pip-ephem-wheel-cache-_4j6mgd2 2023-10-10T18:48:46,005 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-10-10T18:48:46,008 2 location(s) to search for versions of mdapy: 2023-10-10T18:48:46,008 * https://pypi.org/simple/mdapy/ 2023-10-10T18:48:46,008 * https://www.piwheels.org/simple/mdapy/ 2023-10-10T18:48:46,009 Fetching project page and analyzing links: https://pypi.org/simple/mdapy/ 2023-10-10T18:48:46,010 Getting page https://pypi.org/simple/mdapy/ 2023-10-10T18:48:46,011 Found index url https://pypi.org/simple/ 2023-10-10T18:48:46,243 Fetched page https://pypi.org/simple/mdapy/ as application/vnd.pypi.simple.v1+json 2023-10-10T18:48:46,273 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/f8/b3/fa3165f5371bf25f330d582412ce6111d81d16e1068c6a52fff3aeed48fd/mdapy-0.7.6-cp310-cp310-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-10-10T18:48:46,274 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/af/78/2606a229dc0aeee9d63eecc4aaa6768aa4d2bb0a78564e452d46b970a43a/mdapy-0.7.6-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-10-10T18:48:46,274 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/73/6a/640a3d6e6e3c97d06a1bf73d2b6904c3a7f1b1a9c11de29ae1e0476fe7c6/mdapy-0.7.6-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-10-10T18:48:46,275 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/66/fc/4d83046add95582345104742c12fb8e2a6b3a8968732fe31c8579f5a97ef/mdapy-0.7.6-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-10-10T18:48:46,275 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/07/5c/7a729f1a535afa699f6dfb3b0397896298f5657a64b71084398cf6cfdc49/mdapy-0.7.6-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-10-10T18:48:46,276 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/d5/75/b981c88ef7545d76c6319a483c42086b789bf60aa8ee28eb0607f5f8b154/mdapy-0.7.6-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-10-10T18:48:46,277 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/ce/f4/0990d772c757a937e56751013af5908d37cff6ecb567d08ce583492c9d1b/mdapy-0.7.6-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-10-10T18:48:46,278 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/42/e6/0e929a981723be23cf81fcc63c7b3c01ca77c8922750a4cbbbb83e267c79/mdapy-0.7.6-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-10-10T18:48:46,278 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/14/2c/f0eb260b52cfb221f26d5c334067e6d40e62ee530257b26202bc6db7d1a5/mdapy-0.7.7-cp310-cp310-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-10-10T18:48:46,279 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/34/8a/93cd6fbd746a8c595d4af152a3dbcf030e6d28659886cd07a4b2f1e8e1c2/mdapy-0.7.7-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-10-10T18:48:46,279 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/bc/ad/c7c9bdfaa2b1fdb0053910f21cf3f7ff576a2880a6d6c17767ea9232faa3/mdapy-0.7.7-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-10-10T18:48:46,280 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/f3/bf/9be55b37f2e836515bc7f1b8e9668dc5e2fd023cb79656647fbed4d1f1be/mdapy-0.7.7-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-10-10T18:48:46,281 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/8b/a9/45c25f4ab8b7ab05ec032f1dfa62c1d7804fa146c2b212b4daf059ddc6a2/mdapy-0.7.7-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-10-10T18:48:46,282 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/fb/54/c2934735ce4f6ea9518a1a247ffe136ce0c332794680f5fa0ea102efe3f6/mdapy-0.7.7-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-10-10T18:48:46,282 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/98/a0/c93988cb06071f1bffd1456c70ff7d4c44097118770f0b48ff6258eb2e70/mdapy-0.7.7-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-10-10T18:48:46,283 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/63/57/d03d7cc497f604328eebe8969f74599617857dd3d2ab3625273b1c7186de/mdapy-0.7.7-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-10-10T18:48:46,283 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/6d/8c/4139c161385c8f21777eb003899d40ca9da4223cc323930d278703c99d7c/mdapy-0.7.8-cp310-cp310-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-10-10T18:48:46,283 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/47/83/350174a1238e5d982e7d5a58966ffb1b142fb1c65d15359d8b58b3455b7a/mdapy-0.7.8-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-10-10T18:48:46,284 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/52/f6/c3fe6f103679c6ad7285525645c4bf14ae435a289b08a3830b374a81cecf/mdapy-0.7.8-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-10-10T18:48:46,285 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/b2/50/dbac02eb7159c6e96f0d5bbb97ae538f52fc7ec25423e600caa81aeab089/mdapy-0.7.8-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-10-10T18:48:46,286 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/27/48/dc4cb441bf2e06da3eecfaa9b13554f8a6282312c842f271b6bf3059e331/mdapy-0.7.8-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-10-10T18:48:46,286 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/14/24/39fced0a574be250cfeb26e75acf14336ffb3481dc072b7eb6afcf8ad699/mdapy-0.7.8-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-10-10T18:48:46,287 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/f6/ea/8e024914da8f894f8d5ab36f8ff5a1e6eadbd92fdc38210b84ae7e2f17ce/mdapy-0.7.8-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-10-10T18:48:46,288 Skipping link: No binaries permitted for mdapy: 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https://files.pythonhosted.org/packages/64/37/535f581360ef0de48cfffd4b513b2aa8f0614c98cbe5feef87a5f3930bd8/mdapy-0.7.9-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-10-10T18:48:46,290 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/f9/b2/72561dbdc5fa58ef0d747248bd751325b02c8d4c7baa1519bd09d57bbc8e/mdapy-0.7.9-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-10-10T18:48:46,291 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/13/4e/be694bee4fffcd3f5600fd814b608c09e61b3c46a13fc84d4c521f6e6d1e/mdapy-0.7.9-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-10-10T18:48:46,291 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/41/d8/817cc28ba5a64d9a1b521ef81d4111a989d0e53bf4cc8ec13dd96ee8f161/mdapy-0.7.9-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-10-10T18:48:46,292 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/cf/40/508593c043867dd44cce50205b0655c5ee126e7e3970c9d3253977ab12ac/mdapy-0.7.9-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-10-10T18:48:46,292 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/bd/0e/9e3f7b468657d407e2653ba96fc2bcd2e856b44f11f3d06c9700f505f7c7/mdapy-0.7.9-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-10-10T18:48:46,293 Skipping link: No binaries permitted for mdapy: 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https://files.pythonhosted.org/packages/f3/2b/84e3176d2875e2a7ab804f4bbc308361df4186cf55d4d75208570ce902d7/mdapy-0.8.0-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-10-10T18:48:46,295 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/c5/e4/9f8e21909375e257a0a4169b5ff6fda95d034e69a29ad1240490e40ec71c/mdapy-0.8.0-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-10-10T18:48:46,296 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/6a/20/4285e0e556ad71a6fdfb6e6cb228e929e2d025e62a03536795ed241e7132/mdapy-0.8.0-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-10-10T18:48:46,296 Skipping link: No binaries permitted for mdapy: 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https://files.pythonhosted.org/packages/24/6d/c5e85e1ef908a21cc351bc87f107640cfdad83ca630f68422ff319bad49e/mdapy-0.9.1-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-10-10T18:48:46,366 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/70/fc/548932228097ee4df0bd6201002c6dd28aff872e7fa86aab0c9ba7ddc8f4/mdapy-0.9.1-cp311-cp311-macosx_10_14_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-10-10T18:48:46,367 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/f7/c0/a3a41e484e1e9e18d93a9201b9030a7cbd24a9c3f8c4ed7d7ff1fe18947d/mdapy-0.9.1-cp311-cp311-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-10-10T18:48:46,368 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/27/d4/e3ce4bfe6f82909420e227cb8fb867ee6a1cf7103d7cd0dcd24101a6cd2b/mdapy-0.9.1-cp311-cp311-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-10-10T18:48:46,368 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/6d/ed/9619891079954da2e86e73c2f2f709bbb185588b2081027a0538c351bd3c/mdapy-0.9.1-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-10-10T18:48:46,369 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/ef/81/558c06bd74d1ebf269505cbed31f7691dc3e82618bcfca325f99dcd67971/mdapy-0.9.1-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-10-10T18:48:46,370 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/41/6c/1563e80311af00c35817b35625a1760018f6aaf06b63686c5bf49581bf19/mdapy-0.9.1-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-10-10T18:48:46,370 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/d6/7e/558a72be24b8d0afaf8a9bfcbb3f95588d7f30c65f9fc21d457d9ed61406/mdapy-0.9.1-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-10-10T18:48:46,371 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/a5/14/a5de85f8a33195c4b86c12e2db6520acb1ae65b38529d6d6564a37cc69f0/mdapy-0.9.1-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-10-10T18:48:46,372 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/53/38/8cb33caff6121acc58e279293556f34c07641566c484f72b7e688fa27944/mdapy-0.9.1-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-10-10T18:48:46,373 Found link https://files.pythonhosted.org/packages/6f/b5/7084f1afd8fc1289e79ae8bcdffaf1d930e71d56c23a02d10ed0d028fc16/mdapy-0.9.1.tar.gz (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12), version: 0.9.1 2023-10-10T18:48:46,374 Fetching project page and analyzing links: https://www.piwheels.org/simple/mdapy/ 2023-10-10T18:48:46,374 Getting page https://www.piwheels.org/simple/mdapy/ 2023-10-10T18:48:46,376 Found index url https://www.piwheels.org/simple/ 2023-10-10T18:48:46,552 Fetched page https://www.piwheels.org/simple/mdapy/ as text/html 2023-10-10T18:48:46,554 Skipping link: not a file: https://www.piwheels.org/simple/mdapy/ 2023-10-10T18:48:46,554 Skipping link: not a file: https://pypi.org/simple/mdapy/ 2023-10-10T18:48:46,572 Given no hashes to check 1 links for project 'mdapy': discarding no candidates 2023-10-10T18:48:46,590 Collecting mdapy==0.9.1 2023-10-10T18:48:46,592 Created temporary directory: /tmp/pip-unpack-yihl307p 2023-10-10T18:48:46,820 Downloading mdapy-0.9.1.tar.gz (4.1 MB) 2023-10-10T18:48:48,413 Added mdapy==0.9.1 from https://files.pythonhosted.org/packages/6f/b5/7084f1afd8fc1289e79ae8bcdffaf1d930e71d56c23a02d10ed0d028fc16/mdapy-0.9.1.tar.gz to build tracker '/tmp/pip-build-tracker-mvjr_pqx' 2023-10-10T18:48:48,418 Created temporary directory: /tmp/pip-build-env-f3eoc7fl 2023-10-10T18:48:48,423 Installing build dependencies: started 2023-10-10T18:48:48,424 Running command pip subprocess to install build dependencies 2023-10-10T18:48:49,568 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-10-10T18:48:50,088 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-10-10T18:48:51,641 Collecting setuptools 2023-10-10T18:48:51,711 Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.2.2-py3-none-any.whl (807 kB) 2023-10-10T18:48:51,948 Collecting wheel 2023-10-10T18:48:51,963 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB) 2023-10-10T18:48:52,139 Collecting pybind11 2023-10-10T18:48:52,168 Using cached https://www.piwheels.org/simple/pybind11/pybind11-2.11.1-py3-none-any.whl (227 kB) 2023-10-10T18:48:54,771 Installing collected packages: wheel, setuptools, pybind11 2023-10-10T18:48:55,012 Creating /tmp/pip-build-env-f3eoc7fl/overlay/local/bin 2023-10-10T18:48:55,015 changing mode of /tmp/pip-build-env-f3eoc7fl/overlay/local/bin/wheel to 755 2023-10-10T18:48:57,442 changing mode of /tmp/pip-build-env-f3eoc7fl/overlay/local/bin/pybind11-config to 755 2023-10-10T18:48:57,465 Successfully installed pybind11-2.11.1 setuptools-68.2.2 wheel-0.41.2 2023-10-10T18:48:58,005 Installing build dependencies: finished with status 'done' 2023-10-10T18:48:58,009 Getting requirements to build wheel: started 2023-10-10T18:48:58,010 Running command Getting requirements to build wheel 2023-10-10T18:48:58,578 running egg_info 2023-10-10T18:48:58,583 writing mdapy.egg-info/PKG-INFO 2023-10-10T18:48:58,587 writing dependency_links to mdapy.egg-info/dependency_links.txt 2023-10-10T18:48:58,589 writing requirements to mdapy.egg-info/requires.txt 2023-10-10T18:48:58,590 writing top-level names to mdapy.egg-info/top_level.txt 2023-10-10T18:48:58,612 reading manifest file 'mdapy.egg-info/SOURCES.txt' 2023-10-10T18:48:58,628 adding license file 'LICENSE' 2023-10-10T18:48:58,635 writing manifest file 'mdapy.egg-info/SOURCES.txt' 2023-10-10T18:48:58,714 Getting requirements to build wheel: finished with status 'done' 2023-10-10T18:48:58,726 Created temporary directory: /tmp/pip-modern-metadata-1n0m4g4w 2023-10-10T18:48:58,728 Preparing metadata (pyproject.toml): started 2023-10-10T18:48:58,730 Running command Preparing metadata (pyproject.toml) 2023-10-10T18:48:59,248 running dist_info 2023-10-10T18:48:59,267 creating /tmp/pip-modern-metadata-1n0m4g4w/mdapy.egg-info 2023-10-10T18:48:59,272 writing /tmp/pip-modern-metadata-1n0m4g4w/mdapy.egg-info/PKG-INFO 2023-10-10T18:48:59,276 writing dependency_links to /tmp/pip-modern-metadata-1n0m4g4w/mdapy.egg-info/dependency_links.txt 2023-10-10T18:48:59,278 writing requirements to /tmp/pip-modern-metadata-1n0m4g4w/mdapy.egg-info/requires.txt 2023-10-10T18:48:59,279 writing top-level names to /tmp/pip-modern-metadata-1n0m4g4w/mdapy.egg-info/top_level.txt 2023-10-10T18:48:59,280 writing manifest file '/tmp/pip-modern-metadata-1n0m4g4w/mdapy.egg-info/SOURCES.txt' 2023-10-10T18:48:59,299 reading manifest file '/tmp/pip-modern-metadata-1n0m4g4w/mdapy.egg-info/SOURCES.txt' 2023-10-10T18:48:59,301 adding license file 'LICENSE' 2023-10-10T18:48:59,304 writing manifest file '/tmp/pip-modern-metadata-1n0m4g4w/mdapy.egg-info/SOURCES.txt' 2023-10-10T18:48:59,305 creating '/tmp/pip-modern-metadata-1n0m4g4w/mdapy-0.9.1.dist-info' 2023-10-10T18:48:59,494 Preparing metadata (pyproject.toml): finished with status 'done' 2023-10-10T18:48:59,499 Source in /tmp/pip-wheel-_pp_6c70/mdapy_11a729a54e1f4eeaad808180238b663c has version 0.9.1, which satisfies requirement mdapy==0.9.1 from https://files.pythonhosted.org/packages/6f/b5/7084f1afd8fc1289e79ae8bcdffaf1d930e71d56c23a02d10ed0d028fc16/mdapy-0.9.1.tar.gz 2023-10-10T18:48:59,500 Removed mdapy==0.9.1 from https://files.pythonhosted.org/packages/6f/b5/7084f1afd8fc1289e79ae8bcdffaf1d930e71d56c23a02d10ed0d028fc16/mdapy-0.9.1.tar.gz from build tracker '/tmp/pip-build-tracker-mvjr_pqx' 2023-10-10T18:48:59,506 Created temporary directory: /tmp/pip-unpack-l6_t8j07 2023-10-10T18:48:59,508 Created temporary directory: /tmp/pip-unpack-ke0rq3z2 2023-10-10T18:48:59,520 Building wheels for collected packages: mdapy 2023-10-10T18:48:59,525 Created temporary directory: /tmp/pip-wheel-cpbb50d8 2023-10-10T18:48:59,526 Destination directory: /tmp/pip-wheel-cpbb50d8 2023-10-10T18:48:59,528 Building wheel for mdapy (pyproject.toml): started 2023-10-10T18:48:59,529 Running command Building wheel for mdapy (pyproject.toml) 2023-10-10T18:49:00,077 running bdist_wheel 2023-10-10T18:49:00,106 running build 2023-10-10T18:49:00,107 running build_py 2023-10-10T18:49:00,115 creating build 2023-10-10T18:49:00,116 creating build/lib.linux-armv7l-cpython-311 2023-10-10T18:49:00,116 creating build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,118 copying mdapy/pigz.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,120 copying mdapy/nearest_neighbor.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,123 copying mdapy/plotset.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,125 copying mdapy/entropy.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,127 copying mdapy/eam_generate.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,130 copying mdapy/calculator.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,133 copying mdapy/replicate.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,135 copying mdapy/common_neighbor_analysis.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,137 copying mdapy/timer.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,139 copying mdapy/steinhardt_bond_orientation.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,142 copying mdapy/eam_average.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,144 copying mdapy/mean_squared_displacement.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,147 copying mdapy/cluser_analysis.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,149 copying mdapy/create_polycrystalline.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,151 copying mdapy/load_save_data.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,153 copying mdapy/temperature.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,155 copying mdapy/tool_function.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,157 copying mdapy/identify_SFs_TBs.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,160 copying mdapy/polyhedral_template_matching.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,162 copying mdapy/spatial_binning.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,164 copying mdapy/void_distribution.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,166 copying mdapy/__init__.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,168 copying mdapy/voronoi_analysis.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,170 copying mdapy/lindemann_parameter.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,172 copying mdapy/system.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,176 copying mdapy/common_neighbor_parameter.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,178 copying mdapy/lattice_maker.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,180 copying mdapy/centro_symmetry_parameter.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,182 copying mdapy/warren_cowley_parameter.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,185 copying mdapy/potential.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,187 copying mdapy/ackland_jones_analysis.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,189 copying mdapy/pair_distribution.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,191 copying mdapy/neighbor.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,195 running build_ext 2023-10-10T18:49:00,202 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c flagcheck.cpp -o flagcheck.o -std=c++17 2023-10-10T18:49:00,285 building '_cluster_analysis' extension 2023-10-10T18:49:00,285 creating build/temp.linux-armv7l-cpython-311 2023-10-10T18:49:00,286 creating build/temp.linux-armv7l-cpython-311/mdapy 2023-10-10T18:49:00,287 creating build/temp.linux-armv7l-cpython-311/mdapy/cluster 2023-10-10T18:49:00,288 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-f3eoc7fl/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c mdapy/cluster/_cluster.cpp -o build/temp.linux-armv7l-cpython-311/mdapy/cluster/_cluster.o -std=c++17 -fvisibility=hidden -g0 2023-10-10T18:49:19,077 arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/mdapy/cluster/_cluster.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/_cluster_analysis.cpython-311-arm-linux-gnueabihf.so 2023-10-10T18:49:19,325 building '_voronoi_analysis' extension 2023-10-10T18:49:19,326 creating build/temp.linux-armv7l-cpython-311/mdapy/voronoi 2023-10-10T18:49:19,327 creating build/temp.linux-armv7l-cpython-311/thirdparty 2023-10-10T18:49:19,327 creating build/temp.linux-armv7l-cpython-311/thirdparty/voro++ 2023-10-10T18:49:19,328 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/voro++ -I/tmp/pip-build-env-f3eoc7fl/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c mdapy/voronoi/_voro.cpp -o build/temp.linux-armv7l-cpython-311/mdapy/voronoi/_voro.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-10-10T18:49:20,715 In file included from thirdparty/voro++/voro++.hh:337, 2023-10-10T18:49:20,715 from mdapy/voronoi/_voro.cpp:6: 2023-10-10T18:49:20,716 thirdparty/voro++/iter_2d.hh:16:49: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,716 16 | class container_base_2d::iterator : public std::iterator { 2023-10-10T18:49:20,717 | ^~~~~~~~ 2023-10-10T18:49:20,717 In file included from /usr/include/c++/12/bits/stl_algobase.h:65, 2023-10-10T18:49:20,718 from /usr/include/c++/12/vector:60, 2023-10-10T18:49:20,718 from thirdparty/voro++/common.hh:12, 2023-10-10T18:49:20,719 from thirdparty/voro++/voro++.hh:318: 2023-10-10T18:49:20,719 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,720 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,720 | ^~~~~~~~ 2023-10-10T18:49:20,721 thirdparty/voro++/iter_2d.hh:21:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,722 21 | typedef typename std::iterator::pointer pointer; 2023-10-10T18:49:20,722 | ^~~~~~~~ 2023-10-10T18:49:20,723 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,724 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,724 | ^~~~~~~~ 2023-10-10T18:49:20,725 thirdparty/voro++/iter_2d.hh:22:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,726 22 | typedef typename std::iterator::reference reference; 2023-10-10T18:49:20,726 | ^~~~~~~~ 2023-10-10T18:49:20,727 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,728 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,729 | ^~~~~~~~ 2023-10-10T18:49:20,729 thirdparty/voro++/iter_2d.hh:23:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,730 23 | typedef typename std::iterator::difference_type difference_type; 2023-10-10T18:49:20,730 | ^~~~~~~~ 2023-10-10T18:49:20,731 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,732 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,732 | ^~~~~~~~ 2023-10-10T18:49:20,733 thirdparty/voro++/iter_2d.hh:153:56: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,734 153 | class container_base_2d::iterator_subset : public std::iterator { 2023-10-10T18:49:20,734 | ^~~~~~~~ 2023-10-10T18:49:20,735 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,736 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,737 | ^~~~~~~~ 2023-10-10T18:49:20,737 thirdparty/voro++/iter_2d.hh:155:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,738 155 | typedef typename std::iterator::pointer pointer; 2023-10-10T18:49:20,738 | ^~~~~~~~ 2023-10-10T18:49:20,739 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,740 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,740 | ^~~~~~~~ 2023-10-10T18:49:20,741 thirdparty/voro++/iter_2d.hh:156:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,741 156 | typedef typename std::iterator::reference reference; 2023-10-10T18:49:20,742 | ^~~~~~~~ 2023-10-10T18:49:20,742 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,743 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,743 | ^~~~~~~~ 2023-10-10T18:49:20,744 thirdparty/voro++/iter_2d.hh:157:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,745 157 | typedef typename std::iterator::difference_type difference_type; 2023-10-10T18:49:20,745 | ^~~~~~~~ 2023-10-10T18:49:20,746 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,746 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,747 | ^~~~~~~~ 2023-10-10T18:49:20,748 thirdparty/voro++/iter_2d.hh:246:55: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,748 246 | class container_base_2d::iterator_order : public std::iterator { 2023-10-10T18:49:20,749 | ^~~~~~~~ 2023-10-10T18:49:20,750 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,750 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,751 | ^~~~~~~~ 2023-10-10T18:49:20,752 thirdparty/voro++/iter_2d.hh:248:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,752 248 | typedef typename std::iterator::pointer pointer; 2023-10-10T18:49:20,753 | ^~~~~~~~ 2023-10-10T18:49:20,754 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,754 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,755 | ^~~~~~~~ 2023-10-10T18:49:20,756 thirdparty/voro++/iter_2d.hh:249:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,757 249 | typedef typename std::iterator::reference reference; 2023-10-10T18:49:20,757 | ^~~~~~~~ 2023-10-10T18:49:20,758 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,759 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,759 | ^~~~~~~~ 2023-10-10T18:49:20,760 thirdparty/voro++/iter_2d.hh:250:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,760 250 | typedef typename std::iterator::difference_type difference_type; 2023-10-10T18:49:20,761 | ^~~~~~~~ 2023-10-10T18:49:20,761 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,762 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,762 | ^~~~~~~~ 2023-10-10T18:49:20,763 In file included from thirdparty/voro++/voro++.hh:338: 2023-10-10T18:49:20,763 thirdparty/voro++/iter_3d.hh:17:49: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,764 17 | class container_base_3d::iterator : public std::iterator { 2023-10-10T18:49:20,765 | ^~~~~~~~ 2023-10-10T18:49:20,765 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,766 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,766 | ^~~~~~~~ 2023-10-10T18:49:20,767 thirdparty/voro++/iter_3d.hh:22:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,768 22 | typedef typename std::iterator::pointer pointer; 2023-10-10T18:49:20,768 | ^~~~~~~~ 2023-10-10T18:49:20,769 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,770 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,771 | ^~~~~~~~ 2023-10-10T18:49:20,771 thirdparty/voro++/iter_3d.hh:23:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,772 23 | typedef typename std::iterator::reference reference; 2023-10-10T18:49:20,773 | ^~~~~~~~ 2023-10-10T18:49:20,774 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,774 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,775 | ^~~~~~~~ 2023-10-10T18:49:20,775 thirdparty/voro++/iter_3d.hh:24:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,776 24 | typedef typename std::iterator::difference_type difference_type; 2023-10-10T18:49:20,777 | ^~~~~~~~ 2023-10-10T18:49:20,778 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,778 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,779 | ^~~~~~~~ 2023-10-10T18:49:20,780 thirdparty/voro++/iter_3d.hh:159:56: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,780 159 | class container_base_3d::iterator_subset : public std::iterator { 2023-10-10T18:49:20,781 | ^~~~~~~~ 2023-10-10T18:49:20,782 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,782 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,783 | ^~~~~~~~ 2023-10-10T18:49:20,783 thirdparty/voro++/iter_3d.hh:161:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,784 161 | typedef typename std::iterator::pointer pointer; 2023-10-10T18:49:20,784 | ^~~~~~~~ 2023-10-10T18:49:20,785 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,786 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,786 | ^~~~~~~~ 2023-10-10T18:49:20,787 thirdparty/voro++/iter_3d.hh:162:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,787 162 | typedef typename std::iterator::reference reference; 2023-10-10T18:49:20,788 | ^~~~~~~~ 2023-10-10T18:49:20,788 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,789 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,790 | ^~~~~~~~ 2023-10-10T18:49:20,791 thirdparty/voro++/iter_3d.hh:163:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,791 163 | typedef typename std::iterator::difference_type difference_type; 2023-10-10T18:49:20,792 | ^~~~~~~~ 2023-10-10T18:49:20,793 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,794 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,794 | ^~~~~~~~ 2023-10-10T18:49:20,795 thirdparty/voro++/iter_3d.hh:252:55: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,795 252 | class container_base_3d::iterator_order : public std::iterator { 2023-10-10T18:49:20,796 | ^~~~~~~~ 2023-10-10T18:49:20,797 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,798 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,798 | ^~~~~~~~ 2023-10-10T18:49:20,799 thirdparty/voro++/iter_3d.hh:254:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,799 254 | typedef typename std::iterator::pointer pointer; 2023-10-10T18:49:20,800 | ^~~~~~~~ 2023-10-10T18:49:20,801 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,802 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,802 | ^~~~~~~~ 2023-10-10T18:49:20,803 thirdparty/voro++/iter_3d.hh:255:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,804 255 | typedef typename std::iterator::reference reference; 2023-10-10T18:49:20,804 | ^~~~~~~~ 2023-10-10T18:49:20,805 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,805 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,806 | ^~~~~~~~ 2023-10-10T18:49:20,806 thirdparty/voro++/iter_3d.hh:256:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,807 256 | typedef typename std::iterator::difference_type difference_type; 2023-10-10T18:49:20,807 | ^~~~~~~~ 2023-10-10T18:49:20,808 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,808 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,809 | ^~~~~~~~ 2023-10-10T18:49:20,810 thirdparty/voro++/iter_3d.hh:365:56: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,810 365 | class container_triclinic_base::iterator : public std::iterator 2023-10-10T18:49:20,811 | ^~~~~~~~ 2023-10-10T18:49:20,811 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,812 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,812 | ^~~~~~~~ 2023-10-10T18:49:20,813 thirdparty/voro++/iter_3d.hh:378:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,814 378 | typedef typename std::iterator::pointer pointer; 2023-10-10T18:49:20,814 | ^~~~~~~~ 2023-10-10T18:49:20,815 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,815 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,816 | ^~~~~~~~ 2023-10-10T18:49:20,817 thirdparty/voro++/iter_3d.hh:379:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,817 379 | typedef typename std::iterator::reference reference; 2023-10-10T18:49:20,818 | ^~~~~~~~ 2023-10-10T18:49:20,819 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,820 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,820 | ^~~~~~~~ 2023-10-10T18:49:20,821 thirdparty/voro++/iter_3d.hh:380:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,822 380 | typedef typename std::iterator::difference_type difference_type; 2023-10-10T18:49:20,822 | ^~~~~~~~ 2023-10-10T18:49:20,823 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,824 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,825 | ^~~~~~~~ 2023-10-10T18:49:20,826 thirdparty/voro++/iter_3d.hh:450:62: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,826 450 | class container_triclinic_base::iterator_order : public std::iterator 2023-10-10T18:49:20,827 | ^~~~~~~~ 2023-10-10T18:49:20,827 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,828 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,828 | ^~~~~~~~ 2023-10-10T18:49:20,829 thirdparty/voro++/iter_3d.hh:458:27: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,830 458 | typedef typename std::iterator::pointer pointer; 2023-10-10T18:49:20,830 | ^~~~~~~~ 2023-10-10T18:49:20,831 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,831 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,832 | ^~~~~~~~ 2023-10-10T18:49:20,832 thirdparty/voro++/iter_3d.hh:459:27: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,833 459 | typedef typename std::iterator::reference reference; 2023-10-10T18:49:20,834 | ^~~~~~~~ 2023-10-10T18:49:20,834 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,835 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,836 | ^~~~~~~~ 2023-10-10T18:49:20,837 thirdparty/voro++/iter_3d.hh:460:27: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:20,837 460 | typedef typename std::iterator::difference_type difference_type; 2023-10-10T18:49:20,838 | ^~~~~~~~ 2023-10-10T18:49:20,839 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:20,840 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:20,840 | ^~~~~~~~ 2023-10-10T18:49:25,435 mdapy/voronoi/_voro.cpp: In function ‘std::tuple >, std::allocator > > >, std::allocator >, std::allocator > > > > >, std::vector >, std::allocator > > >, std::allocator >, std::allocator > > > > >, std::vector >, std::vector >, std::vector >, std::allocator > > > > get_cell_info(pybind11::array, pybind11::array, pybind11::array, int)’: 2023-10-10T18:49:25,436 mdapy/voronoi/_voro.cpp:112:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-10-10T18:49:25,436 112 | while (j < face_index_vector.size()) 2023-10-10T18:49:25,437 | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-10-10T18:49:41,704 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/voro++ -I/tmp/pip-build-env-f3eoc7fl/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/voro++/voro++.cc -o build/temp.linux-armv7l-cpython-311/thirdparty/voro++/voro++.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-10-10T18:49:42,876 In file included from thirdparty/voro++/container_2d.cc:10, 2023-10-10T18:49:42,877 from thirdparty/voro++/voro++.cc:10: 2023-10-10T18:49:42,877 thirdparty/voro++/iter_2d.hh:16:49: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:42,878 16 | class container_base_2d::iterator : public std::iterator { 2023-10-10T18:49:42,879 | ^~~~~~~~ 2023-10-10T18:49:42,879 In file included from /usr/include/c++/12/bits/stl_algobase.h:65, 2023-10-10T18:49:42,880 from /usr/include/c++/12/vector:60, 2023-10-10T18:49:42,881 from thirdparty/voro++/cell_2d.hh:11, 2023-10-10T18:49:42,881 from thirdparty/voro++/cell_2d.cc:7, 2023-10-10T18:49:42,882 from thirdparty/voro++/voro++.cc:7: 2023-10-10T18:49:42,882 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:42,883 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:42,884 | ^~~~~~~~ 2023-10-10T18:49:42,884 thirdparty/voro++/iter_2d.hh:21:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:42,885 21 | typedef typename std::iterator::pointer pointer; 2023-10-10T18:49:42,885 | ^~~~~~~~ 2023-10-10T18:49:42,886 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:42,887 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:42,888 | ^~~~~~~~ 2023-10-10T18:49:42,889 thirdparty/voro++/iter_2d.hh:22:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:42,889 22 | typedef typename std::iterator::reference reference; 2023-10-10T18:49:42,890 | ^~~~~~~~ 2023-10-10T18:49:42,891 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:42,892 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:42,892 | ^~~~~~~~ 2023-10-10T18:49:42,893 thirdparty/voro++/iter_2d.hh:23:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:42,894 23 | typedef typename std::iterator::difference_type difference_type; 2023-10-10T18:49:42,895 | ^~~~~~~~ 2023-10-10T18:49:42,895 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:42,896 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:42,897 | ^~~~~~~~ 2023-10-10T18:49:42,898 thirdparty/voro++/iter_2d.hh:153:56: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:42,899 153 | class container_base_2d::iterator_subset : public std::iterator { 2023-10-10T18:49:42,899 | ^~~~~~~~ 2023-10-10T18:49:42,900 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:42,900 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:42,901 | ^~~~~~~~ 2023-10-10T18:49:42,902 thirdparty/voro++/iter_2d.hh:155:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:42,902 155 | typedef typename std::iterator::pointer pointer; 2023-10-10T18:49:42,903 | ^~~~~~~~ 2023-10-10T18:49:42,903 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:42,904 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:42,904 | ^~~~~~~~ 2023-10-10T18:49:42,905 thirdparty/voro++/iter_2d.hh:156:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:42,906 156 | typedef typename std::iterator::reference reference; 2023-10-10T18:49:42,906 | ^~~~~~~~ 2023-10-10T18:49:42,907 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:42,907 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:42,908 | ^~~~~~~~ 2023-10-10T18:49:42,909 thirdparty/voro++/iter_2d.hh:157:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:42,910 157 | typedef typename std::iterator::difference_type difference_type; 2023-10-10T18:49:42,910 | ^~~~~~~~ 2023-10-10T18:49:42,911 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:42,912 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:42,913 | ^~~~~~~~ 2023-10-10T18:49:42,914 thirdparty/voro++/iter_2d.hh:246:55: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:42,914 246 | class container_base_2d::iterator_order : public std::iterator { 2023-10-10T18:49:42,915 | ^~~~~~~~ 2023-10-10T18:49:42,916 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:42,916 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:42,917 | ^~~~~~~~ 2023-10-10T18:49:42,918 thirdparty/voro++/iter_2d.hh:248:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:42,919 248 | typedef typename std::iterator::pointer pointer; 2023-10-10T18:49:42,919 | ^~~~~~~~ 2023-10-10T18:49:42,920 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:42,921 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:42,922 | ^~~~~~~~ 2023-10-10T18:49:42,922 thirdparty/voro++/iter_2d.hh:249:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:42,923 249 | typedef typename std::iterator::reference reference; 2023-10-10T18:49:42,924 | ^~~~~~~~ 2023-10-10T18:49:42,924 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:42,925 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:42,925 | ^~~~~~~~ 2023-10-10T18:49:42,926 thirdparty/voro++/iter_2d.hh:250:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:42,927 250 | typedef typename std::iterator::difference_type difference_type; 2023-10-10T18:49:42,927 | ^~~~~~~~ 2023-10-10T18:49:42,928 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:42,928 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:42,929 | ^~~~~~~~ 2023-10-10T18:49:43,018 In file included from thirdparty/voro++/container_3d.cc:10, 2023-10-10T18:49:43,018 from thirdparty/voro++/voro++.cc:11: 2023-10-10T18:49:43,019 thirdparty/voro++/iter_3d.hh:17:49: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:43,020 17 | class container_base_3d::iterator : public std::iterator { 2023-10-10T18:49:43,020 | ^~~~~~~~ 2023-10-10T18:49:43,021 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:43,022 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:43,023 | ^~~~~~~~ 2023-10-10T18:49:43,024 thirdparty/voro++/iter_3d.hh:22:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:43,024 22 | typedef typename std::iterator::pointer pointer; 2023-10-10T18:49:43,025 | ^~~~~~~~ 2023-10-10T18:49:43,026 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:43,026 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:43,027 | ^~~~~~~~ 2023-10-10T18:49:43,028 thirdparty/voro++/iter_3d.hh:23:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:43,028 23 | typedef typename std::iterator::reference reference; 2023-10-10T18:49:43,029 | ^~~~~~~~ 2023-10-10T18:49:43,030 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:43,030 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:43,031 | ^~~~~~~~ 2023-10-10T18:49:43,032 thirdparty/voro++/iter_3d.hh:24:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:43,032 24 | typedef typename std::iterator::difference_type difference_type; 2023-10-10T18:49:43,033 | ^~~~~~~~ 2023-10-10T18:49:43,034 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:43,034 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:43,035 | ^~~~~~~~ 2023-10-10T18:49:43,036 thirdparty/voro++/iter_3d.hh:159:56: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:43,036 159 | class container_base_3d::iterator_subset : public std::iterator { 2023-10-10T18:49:43,037 | ^~~~~~~~ 2023-10-10T18:49:43,037 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:43,038 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:43,038 | ^~~~~~~~ 2023-10-10T18:49:43,039 thirdparty/voro++/iter_3d.hh:161:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:43,039 161 | typedef typename std::iterator::pointer pointer; 2023-10-10T18:49:43,040 | ^~~~~~~~ 2023-10-10T18:49:43,040 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:43,041 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:43,042 | ^~~~~~~~ 2023-10-10T18:49:43,042 thirdparty/voro++/iter_3d.hh:162:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:43,043 162 | typedef typename std::iterator::reference reference; 2023-10-10T18:49:43,044 | ^~~~~~~~ 2023-10-10T18:49:43,045 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:43,045 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:43,046 | ^~~~~~~~ 2023-10-10T18:49:43,047 thirdparty/voro++/iter_3d.hh:163:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:43,048 163 | typedef typename std::iterator::difference_type difference_type; 2023-10-10T18:49:43,048 | ^~~~~~~~ 2023-10-10T18:49:43,049 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:43,049 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:43,050 | ^~~~~~~~ 2023-10-10T18:49:43,051 thirdparty/voro++/iter_3d.hh:252:55: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:43,051 252 | class container_base_3d::iterator_order : public std::iterator { 2023-10-10T18:49:43,052 | ^~~~~~~~ 2023-10-10T18:49:43,053 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:43,054 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:43,054 | ^~~~~~~~ 2023-10-10T18:49:43,055 thirdparty/voro++/iter_3d.hh:254:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:43,056 254 | typedef typename std::iterator::pointer pointer; 2023-10-10T18:49:43,057 | ^~~~~~~~ 2023-10-10T18:49:43,057 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:43,058 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:43,058 | ^~~~~~~~ 2023-10-10T18:49:43,059 thirdparty/voro++/iter_3d.hh:255:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:43,059 255 | typedef typename std::iterator::reference reference; 2023-10-10T18:49:43,060 | ^~~~~~~~ 2023-10-10T18:49:43,061 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:43,061 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:43,062 | ^~~~~~~~ 2023-10-10T18:49:43,062 thirdparty/voro++/iter_3d.hh:256:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:43,063 256 | typedef typename std::iterator::difference_type difference_type; 2023-10-10T18:49:43,063 | ^~~~~~~~ 2023-10-10T18:49:43,064 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:43,064 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:43,065 | ^~~~~~~~ 2023-10-10T18:49:43,066 thirdparty/voro++/iter_3d.hh:365:56: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:43,066 365 | class container_triclinic_base::iterator : public std::iterator 2023-10-10T18:49:43,067 | ^~~~~~~~ 2023-10-10T18:49:43,068 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:43,069 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:43,069 | ^~~~~~~~ 2023-10-10T18:49:43,070 thirdparty/voro++/iter_3d.hh:378:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:43,071 378 | typedef typename std::iterator::pointer pointer; 2023-10-10T18:49:43,071 | ^~~~~~~~ 2023-10-10T18:49:43,072 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:43,072 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:43,073 | ^~~~~~~~ 2023-10-10T18:49:43,074 thirdparty/voro++/iter_3d.hh:379:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:43,075 379 | typedef typename std::iterator::reference reference; 2023-10-10T18:49:43,075 | ^~~~~~~~ 2023-10-10T18:49:43,076 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:43,077 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:43,078 | ^~~~~~~~ 2023-10-10T18:49:43,079 thirdparty/voro++/iter_3d.hh:380:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:43,079 380 | typedef typename std::iterator::difference_type difference_type; 2023-10-10T18:49:43,080 | ^~~~~~~~ 2023-10-10T18:49:43,080 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:43,081 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:43,082 | ^~~~~~~~ 2023-10-10T18:49:43,082 thirdparty/voro++/iter_3d.hh:450:62: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:43,083 450 | class container_triclinic_base::iterator_order : public std::iterator 2023-10-10T18:49:43,083 | ^~~~~~~~ 2023-10-10T18:49:43,084 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:43,084 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:43,085 | ^~~~~~~~ 2023-10-10T18:49:43,086 thirdparty/voro++/iter_3d.hh:458:27: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:43,086 458 | typedef typename std::iterator::pointer pointer; 2023-10-10T18:49:43,087 | ^~~~~~~~ 2023-10-10T18:49:43,088 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:43,088 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:43,089 | ^~~~~~~~ 2023-10-10T18:49:43,090 thirdparty/voro++/iter_3d.hh:459:27: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:43,090 459 | typedef typename std::iterator::reference reference; 2023-10-10T18:49:43,091 | ^~~~~~~~ 2023-10-10T18:49:43,091 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:43,092 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:43,093 | ^~~~~~~~ 2023-10-10T18:49:43,093 thirdparty/voro++/iter_3d.hh:460:27: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-10-10T18:49:43,094 460 | typedef typename std::iterator::difference_type difference_type; 2023-10-10T18:49:43,095 | ^~~~~~~~ 2023-10-10T18:49:43,095 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-10-10T18:49:43,096 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-10-10T18:49:43,097 | ^~~~~~~~ 2023-10-10T18:50:10,018 In file included from /usr/include/c++/12/vector:70: 2023-10-10T18:50:10,018 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2023-10-10T18:50:10,019 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-10-10T18:50:10,019 439 | vector<_Tp, _Alloc>:: 2023-10-10T18:50:10,020 | ^~~~~~~~~~~~~~~~~~~ 2023-10-10T18:50:21,095 In file included from /usr/include/c++/12/vector:64: 2023-10-10T18:50:21,096 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2023-10-10T18:50:21,096 inlined from ‘void voro::unitcell::images(std::vector&, std::vector&)’ at thirdparty/voro++/unitcell.cc:147:25: 2023-10-10T18:50:21,097 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-10-10T18:50:21,098 1287 | _M_realloc_insert(end(), __x); 2023-10-10T18:50:21,098 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-10-10T18:50:21,558 arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/mdapy/voronoi/_voro.o build/temp.linux-armv7l-cpython-311/thirdparty/voro++/voro++.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/_voronoi_analysis.cpython-311-arm-linux-gnueabihf.so -fopenmp 2023-10-10T18:50:21,901 building '_ptm' extension 2023-10-10T18:50:21,902 creating build/temp.linux-armv7l-cpython-311/mdapy/ptm 2023-10-10T18:50:21,903 creating build/temp.linux-armv7l-cpython-311/thirdparty/ptm 2023-10-10T18:50:21,904 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-f3eoc7fl/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c mdapy/ptm/_ptm.cpp -o build/temp.linux-armv7l-cpython-311/mdapy/ptm/_ptm.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-10-10T18:50:28,057 mdapy/ptm/_ptm.cpp: In function ‘void get_ptm(char*, double_py, int_py, pybind11::array_t, pybind11::array_t, pybind11::array_t, double, pybind11::array)’: 2023-10-10T18:50:28,058 mdapy/ptm/_ptm.cpp:102:14: warning: variable ‘found’ set but not used [-Wunused-but-set-variable] 2023-10-10T18:50:28,058 102 | bool found = false; 2023-10-10T18:50:28,059 | ^~~~~ 2023-10-10T18:50:42,183 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-f3eoc7fl/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_alloy_types.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_alloy_types.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-10-10T18:50:43,353 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-f3eoc7fl/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_canonical_coloured.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_canonical_coloured.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-10-10T18:50:43,989 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-f3eoc7fl/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_constants.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_constants.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-10-10T18:50:44,073 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-f3eoc7fl/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_convex_hull_incremental.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_convex_hull_incremental.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-10-10T18:50:45,158 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-f3eoc7fl/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_deformation_gradient.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_deformation_gradient.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-10-10T18:50:46,010 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-f3eoc7fl/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_graph_data.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_graph_data.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-10-10T18:50:46,325 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-f3eoc7fl/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_graph_tools.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_graph_tools.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-10-10T18:50:46,814 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-f3eoc7fl/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_index.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_index.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-10-10T18:50:47,982 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-f3eoc7fl/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_initialize_data.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_initialize_data.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-10-10T18:50:48,720 thirdparty/ptm/ptm_initialize_data.cpp: In function ‘int initialize_graphs(const ptm::refdata_t*, int8_t*)’: 2023-10-10T18:50:48,721 thirdparty/ptm/ptm_initialize_data.cpp:34:21: warning: unused variable ‘_max_degree’ [-Wunused-variable] 2023-10-10T18:50:48,721 34 | int _max_degree = ptm::graph_degree(s->num_facets, s->graphs[i].facets, s->num_nbrs, degree); 2023-10-10T18:50:48,722 | ^~~~~~~~~~~ 2023-10-10T18:50:48,946 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-f3eoc7fl/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_neighbour_ordering.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_neighbour_ordering.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-10-10T18:50:51,513 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-f3eoc7fl/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_normalize_vertices.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_normalize_vertices.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-10-10T18:50:52,266 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-f3eoc7fl/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_polar.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_polar.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-10-10T18:50:53,418 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-f3eoc7fl/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_quat.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_quat.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-10-10T18:50:54,483 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-f3eoc7fl/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_structure_matcher.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_structure_matcher.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-10-10T18:50:55,820 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-f3eoc7fl/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_voronoi_cell.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_voronoi_cell.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-10-10T18:51:00,029 In file included from /usr/include/c++/12/vector:70, 2023-10-10T18:51:00,030 from thirdparty/ptm/ptm_voronoi_cell.h:59, 2023-10-10T18:51:00,031 from thirdparty/ptm/ptm_voronoi_cell.cpp:59: 2023-10-10T18:51:00,031 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2023-10-10T18:51:00,032 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-10-10T18:51:00,033 439 | vector<_Tp, _Alloc>:: 2023-10-10T18:51:00,034 | ^~~~~~~~~~~~~~~~~~~ 2023-10-10T18:51:00,094 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, 2023-10-10T18:51:00,095 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-10-10T18:51:00,096 inlined from ‘void ptm_voro::voronoicell_base::face_areas(std::vector&)’ at thirdparty/ptm/ptm_voronoi_cell.cpp:1251:36: 2023-10-10T18:51:00,096 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-10-10T18:51:00,097 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-10-10T18:51:00,098 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-10-10T18:51:00,307 arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/mdapy/ptm/_ptm.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_alloy_types.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_canonical_coloured.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_constants.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_convex_hull_incremental.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_deformation_gradient.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_graph_data.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_graph_tools.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_index.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_initialize_data.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_neighbour_ordering.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_normalize_vertices.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_polar.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_quat.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_structure_matcher.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_voronoi_cell.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/_ptm.cpython-311-arm-linux-gnueabihf.so -fopenmp 2023-10-10T18:51:00,604 building '_rdf' extension 2023-10-10T18:51:00,604 creating build/temp.linux-armv7l-cpython-311/mdapy/rdf 2023-10-10T18:51:00,606 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-f3eoc7fl/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c mdapy/rdf/_rdf.cpp -o build/temp.linux-armv7l-cpython-311/mdapy/rdf/_rdf.o -std=c++17 -fvisibility=hidden -g0 2023-10-10T18:51:19,131 arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/mdapy/rdf/_rdf.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/_rdf.cpython-311-arm-linux-gnueabihf.so 2023-10-10T18:51:19,378 building '_neigh' extension 2023-10-10T18:51:19,379 creating build/temp.linux-armv7l-cpython-311/mdapy/neigh 2023-10-10T18:51:19,381 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-f3eoc7fl/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c mdapy/neigh/_neigh.cpp -o build/temp.linux-armv7l-cpython-311/mdapy/neigh/_neigh.o -std=c++17 -fvisibility=hidden -g0 2023-10-10T18:51:38,128 arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/mdapy/neigh/_neigh.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/_neigh.cpython-311-arm-linux-gnueabihf.so 2023-10-10T18:51:38,392 installing to build/bdist.linux-armv7l/wheel 2023-10-10T18:51:38,393 running install 2023-10-10T18:51:38,417 running install_lib 2023-10-10T18:51:38,425 creating build/bdist.linux-armv7l 2023-10-10T18:51:38,426 creating build/bdist.linux-armv7l/wheel 2023-10-10T18:51:38,428 copying build/lib.linux-armv7l-cpython-311/_neigh.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel 2023-10-10T18:51:38,433 copying build/lib.linux-armv7l-cpython-311/_ptm.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel 2023-10-10T18:51:38,442 copying build/lib.linux-armv7l-cpython-311/_voronoi_analysis.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel 2023-10-10T18:51:38,453 copying build/lib.linux-armv7l-cpython-311/_cluster_analysis.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel 2023-10-10T18:51:38,458 creating build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,459 copying build/lib.linux-armv7l-cpython-311/mdapy/pigz.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,462 copying build/lib.linux-armv7l-cpython-311/mdapy/nearest_neighbor.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,465 copying build/lib.linux-armv7l-cpython-311/mdapy/plotset.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,467 copying build/lib.linux-armv7l-cpython-311/mdapy/entropy.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,469 copying build/lib.linux-armv7l-cpython-311/mdapy/eam_generate.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,472 copying build/lib.linux-armv7l-cpython-311/mdapy/calculator.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,474 copying build/lib.linux-armv7l-cpython-311/mdapy/replicate.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,477 copying build/lib.linux-armv7l-cpython-311/mdapy/common_neighbor_analysis.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,479 copying build/lib.linux-armv7l-cpython-311/mdapy/timer.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,481 copying build/lib.linux-armv7l-cpython-311/mdapy/steinhardt_bond_orientation.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,483 copying build/lib.linux-armv7l-cpython-311/mdapy/eam_average.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,485 copying build/lib.linux-armv7l-cpython-311/mdapy/mean_squared_displacement.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,487 copying build/lib.linux-armv7l-cpython-311/mdapy/cluser_analysis.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,489 copying build/lib.linux-armv7l-cpython-311/mdapy/create_polycrystalline.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,492 copying build/lib.linux-armv7l-cpython-311/mdapy/load_save_data.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,494 copying build/lib.linux-armv7l-cpython-311/mdapy/temperature.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,496 copying build/lib.linux-armv7l-cpython-311/mdapy/tool_function.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,498 copying build/lib.linux-armv7l-cpython-311/mdapy/identify_SFs_TBs.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,500 copying build/lib.linux-armv7l-cpython-311/mdapy/polyhedral_template_matching.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,503 copying build/lib.linux-armv7l-cpython-311/mdapy/spatial_binning.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,505 copying build/lib.linux-armv7l-cpython-311/mdapy/void_distribution.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,507 copying build/lib.linux-armv7l-cpython-311/mdapy/__init__.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,509 copying build/lib.linux-armv7l-cpython-311/mdapy/voronoi_analysis.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,511 copying build/lib.linux-armv7l-cpython-311/mdapy/lindemann_parameter.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,513 copying build/lib.linux-armv7l-cpython-311/mdapy/system.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,516 copying build/lib.linux-armv7l-cpython-311/mdapy/common_neighbor_parameter.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,519 copying build/lib.linux-armv7l-cpython-311/mdapy/lattice_maker.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,521 copying build/lib.linux-armv7l-cpython-311/mdapy/centro_symmetry_parameter.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,523 copying build/lib.linux-armv7l-cpython-311/mdapy/warren_cowley_parameter.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,526 copying build/lib.linux-armv7l-cpython-311/mdapy/potential.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,528 copying build/lib.linux-armv7l-cpython-311/mdapy/ackland_jones_analysis.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,530 copying build/lib.linux-armv7l-cpython-311/mdapy/pair_distribution.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,533 copying build/lib.linux-armv7l-cpython-311/mdapy/neighbor.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-10-10T18:51:38,535 copying build/lib.linux-armv7l-cpython-311/_rdf.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel 2023-10-10T18:51:38,539 running install_egg_info 2023-10-10T18:51:38,550 running egg_info 2023-10-10T18:51:38,554 writing mdapy.egg-info/PKG-INFO 2023-10-10T18:51:38,558 writing dependency_links to mdapy.egg-info/dependency_links.txt 2023-10-10T18:51:38,559 writing requirements to mdapy.egg-info/requires.txt 2023-10-10T18:51:38,560 writing top-level names to mdapy.egg-info/top_level.txt 2023-10-10T18:51:38,575 reading manifest file 'mdapy.egg-info/SOURCES.txt' 2023-10-10T18:51:38,595 adding license file 'LICENSE' 2023-10-10T18:51:38,602 writing manifest file 'mdapy.egg-info/SOURCES.txt' 2023-10-10T18:51:38,604 Copying mdapy.egg-info to build/bdist.linux-armv7l/wheel/mdapy-0.9.1-py3.11.egg-info 2023-10-10T18:51:38,616 running install_scripts 2023-10-10T18:51:38,664 creating build/bdist.linux-armv7l/wheel/mdapy-0.9.1.dist-info/WHEEL 2023-10-10T18:51:38,667 creating '/tmp/pip-wheel-cpbb50d8/.tmp-2z6u0lnk/mdapy-0.9.1-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-10-10T18:51:38,694 adding '_cluster_analysis.cpython-311-arm-linux-gnueabihf.so' 2023-10-10T18:51:38,723 adding '_neigh.cpython-311-arm-linux-gnueabihf.so' 2023-10-10T18:51:38,771 adding '_ptm.cpython-311-arm-linux-gnueabihf.so' 2023-10-10T18:51:38,800 adding '_rdf.cpython-311-arm-linux-gnueabihf.so' 2023-10-10T18:51:38,905 adding '_voronoi_analysis.cpython-311-arm-linux-gnueabihf.so' 2023-10-10T18:51:38,912 adding 'mdapy/__init__.py' 2023-10-10T18:51:38,914 adding 'mdapy/ackland_jones_analysis.py' 2023-10-10T18:51:38,916 adding 'mdapy/calculator.py' 2023-10-10T18:51:38,917 adding 'mdapy/centro_symmetry_parameter.py' 2023-10-10T18:51:38,919 adding 'mdapy/cluser_analysis.py' 2023-10-10T18:51:38,921 adding 'mdapy/common_neighbor_analysis.py' 2023-10-10T18:51:38,923 adding 'mdapy/common_neighbor_parameter.py' 2023-10-10T18:51:38,926 adding 'mdapy/create_polycrystalline.py' 2023-10-10T18:51:38,928 adding 'mdapy/eam_average.py' 2023-10-10T18:51:38,930 adding 'mdapy/eam_generate.py' 2023-10-10T18:51:38,932 adding 'mdapy/entropy.py' 2023-10-10T18:51:38,934 adding 'mdapy/identify_SFs_TBs.py' 2023-10-10T18:51:38,936 adding 'mdapy/lattice_maker.py' 2023-10-10T18:51:38,938 adding 'mdapy/lindemann_parameter.py' 2023-10-10T18:51:38,940 adding 'mdapy/load_save_data.py' 2023-10-10T18:51:38,942 adding 'mdapy/mean_squared_displacement.py' 2023-10-10T18:51:38,946 adding 'mdapy/nearest_neighbor.py' 2023-10-10T18:51:38,948 adding 'mdapy/neighbor.py' 2023-10-10T18:51:38,950 adding 'mdapy/pair_distribution.py' 2023-10-10T18:51:38,952 adding 'mdapy/pigz.py' 2023-10-10T18:51:38,954 adding 'mdapy/plotset.py' 2023-10-10T18:51:38,956 adding 'mdapy/polyhedral_template_matching.py' 2023-10-10T18:51:38,957 adding 'mdapy/potential.py' 2023-10-10T18:51:38,959 adding 'mdapy/replicate.py' 2023-10-10T18:51:38,961 adding 'mdapy/spatial_binning.py' 2023-10-10T18:51:38,964 adding 'mdapy/steinhardt_bond_orientation.py' 2023-10-10T18:51:38,971 adding 'mdapy/system.py' 2023-10-10T18:51:38,973 adding 'mdapy/temperature.py' 2023-10-10T18:51:38,974 adding 'mdapy/timer.py' 2023-10-10T18:51:38,976 adding 'mdapy/tool_function.py' 2023-10-10T18:51:38,978 adding 'mdapy/void_distribution.py' 2023-10-10T18:51:38,979 adding 'mdapy/voronoi_analysis.py' 2023-10-10T18:51:38,981 adding 'mdapy/warren_cowley_parameter.py' 2023-10-10T18:51:38,983 adding 'mdapy-0.9.1.dist-info/LICENSE' 2023-10-10T18:51:38,985 adding 'mdapy-0.9.1.dist-info/METADATA' 2023-10-10T18:51:38,986 adding 'mdapy-0.9.1.dist-info/WHEEL' 2023-10-10T18:51:38,987 adding 'mdapy-0.9.1.dist-info/top_level.txt' 2023-10-10T18:51:38,989 adding 'mdapy-0.9.1.dist-info/RECORD' 2023-10-10T18:51:39,002 removing build/bdist.linux-armv7l/wheel 2023-10-10T18:51:39,103 Building wheel for mdapy (pyproject.toml): finished with status 'done' 2023-10-10T18:51:39,123 Created wheel for mdapy: filename=mdapy-0.9.1-cp311-cp311-linux_armv7l.whl size=625268 sha256=4a614bb384e0b45f19f4a1b65ea1bab28abda3e4b1fa3cba4c7160385983f16e 2023-10-10T18:51:39,125 Stored in directory: /tmp/pip-ephem-wheel-cache-_4j6mgd2/wheels/3d/48/49/542b72737175029cd5d2dda5a2cda2d5eb5fd3be678d0ff6c6 2023-10-10T18:51:39,138 Successfully built mdapy 2023-10-10T18:51:39,159 Removed build tracker: '/tmp/pip-build-tracker-mvjr_pqx'