2023-10-17T13:47:34,984 Created temporary directory: /tmp/pip-build-tracker-qdjmz5o7 2023-10-17T13:47:34,985 Initialized build tracking at /tmp/pip-build-tracker-qdjmz5o7 2023-10-17T13:47:34,985 Created build tracker: /tmp/pip-build-tracker-qdjmz5o7 2023-10-17T13:47:34,986 Entered build tracker: /tmp/pip-build-tracker-qdjmz5o7 2023-10-17T13:47:34,987 Created temporary directory: /tmp/pip-wheel-zmjbkq61 2023-10-17T13:47:34,990 Created temporary directory: /tmp/pip-ephem-wheel-cache-gdr06wqf 2023-10-17T13:47:35,012 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-10-17T13:47:35,016 2 location(s) to search for versions of polyclonal: 2023-10-17T13:47:35,016 * https://pypi.org/simple/polyclonal/ 2023-10-17T13:47:35,016 * https://www.piwheels.org/simple/polyclonal/ 2023-10-17T13:47:35,016 Fetching project page and analyzing links: https://pypi.org/simple/polyclonal/ 2023-10-17T13:47:35,017 Getting page https://pypi.org/simple/polyclonal/ 2023-10-17T13:47:35,019 Found index url https://pypi.org/simple/ 2023-10-17T13:47:35,237 Fetched page https://pypi.org/simple/polyclonal/ as application/vnd.pypi.simple.v1+json 2023-10-17T13:47:35,240 Found link https://files.pythonhosted.org/packages/b8/4d/379d4e572ea6f4ca964768b776c73926bdbb932ae61800dbf0a6ed5921eb/polyclonal-5.1.tar.gz (from https://pypi.org/simple/polyclonal/), version: 5.1 2023-10-17T13:47:35,241 Found link https://files.pythonhosted.org/packages/0f/d6/48160223fe9b85fc8a73a70aedfe791da3ffd4ea4b8af2348203993e2876/polyclonal-5.2.tar.gz (from https://pypi.org/simple/polyclonal/), version: 5.2 2023-10-17T13:47:35,242 Found link https://files.pythonhosted.org/packages/27/4f/4042b01e9c1472d734c2589e686617dde9fd18d502a363acd2ea7420ee42/polyclonal-5.3.tar.gz (from https://pypi.org/simple/polyclonal/), version: 5.3 2023-10-17T13:47:35,242 Found link https://files.pythonhosted.org/packages/82/59/8551eb1496f071009402020ba9a1005fd36b3f91b8b00dfcf9d0a663155b/polyclonal-6.0.tar.gz (from https://pypi.org/simple/polyclonal/), version: 6.0 2023-10-17T13:47:35,243 Found link https://files.pythonhosted.org/packages/3e/c8/c30d0fa3b17a30781507169e3597e60ffdac2152e4306fb01bd343f5a1a9/polyclonal-6.1.tar.gz (from https://pypi.org/simple/polyclonal/), version: 6.1 2023-10-17T13:47:35,244 Found link https://files.pythonhosted.org/packages/98/c5/6020c4df01cfaba86f4073a8438fbff598af9bfc92e7cabcb711556a1686/polyclonal-6.2.tar.gz (from https://pypi.org/simple/polyclonal/), version: 6.2 2023-10-17T13:47:35,244 Found link https://files.pythonhosted.org/packages/ff/c9/475f7e3ab03ba8781caffe67f4d03d40246b67be9a21753212b0dd842840/polyclonal-6.3.tar.gz (from https://pypi.org/simple/polyclonal/), version: 6.3 2023-10-17T13:47:35,245 Found link https://files.pythonhosted.org/packages/02/81/3dec9aab580d16b89b31021cfbd1dfda8bb4bb6e10c11eb1456d213cf2ed/polyclonal-6.4.tar.gz (from https://pypi.org/simple/polyclonal/), version: 6.4 2023-10-17T13:47:35,246 Found link https://files.pythonhosted.org/packages/b3/22/53fc8112a8b0e95933cb91642073a561a8fa99d5ee1a4a555286e7dbd4e4/polyclonal-6.5.tar.gz (from https://pypi.org/simple/polyclonal/), version: 6.5 2023-10-17T13:47:35,246 Found link https://files.pythonhosted.org/packages/d6/a7/09d007795e91c8148a2dfc849140473cc104f56eff5aa0e33998cbe1feb7/polyclonal-6.6.tar.gz (from https://pypi.org/simple/polyclonal/), version: 6.6 2023-10-17T13:47:35,247 Found link https://files.pythonhosted.org/packages/9e/17/2624b16c39a8c6d799b467be09d22d9f8182ca43bc3128858cf12b9a33a8/polyclonal-6.7.tar.gz (from https://pypi.org/simple/polyclonal/), version: 6.7 2023-10-17T13:47:35,248 Found link https://files.pythonhosted.org/packages/a5/49/188bc827eaf128e8529d2cce09f2d51218f3490ebc8502346fd7ab381702/polyclonal-6.8.tar.gz (from https://pypi.org/simple/polyclonal/), version: 6.8 2023-10-17T13:47:35,249 Fetching project page and analyzing links: https://www.piwheels.org/simple/polyclonal/ 2023-10-17T13:47:35,249 Getting page https://www.piwheels.org/simple/polyclonal/ 2023-10-17T13:47:35,251 Found index url https://www.piwheels.org/simple/ 2023-10-17T13:47:35,423 Fetched page https://www.piwheels.org/simple/polyclonal/ as text/html 2023-10-17T13:47:35,427 Skipping link: No binaries permitted for polyclonal: https://www.piwheels.org/simple/polyclonal/polyclonal-6.7-py3-none-any.whl#sha256=66829c2e037d64597f631586651fb71b6af7b90324256db0e0bdd67776053fc3 (from https://www.piwheels.org/simple/polyclonal/) 2023-10-17T13:47:35,428 Skipping link: No binaries permitted for polyclonal: https://www.piwheels.org/simple/polyclonal/polyclonal-6.6-py3-none-any.whl#sha256=47d0486306004125db897dd9aab5c7220d8a99d1cab2757b7b4e600b972b2df7 (from https://www.piwheels.org/simple/polyclonal/) 2023-10-17T13:47:35,429 Skipping link: No binaries permitted for polyclonal: https://www.piwheels.org/simple/polyclonal/polyclonal-6.5-py3-none-any.whl#sha256=998f94d68281cab1d5c4a497a2ecebc94a19f5d49932a39b10bbbaeb66ae0fbe (from https://www.piwheels.org/simple/polyclonal/) 2023-10-17T13:47:35,429 Skipping link: No binaries permitted for polyclonal: https://www.piwheels.org/simple/polyclonal/polyclonal-6.4-py3-none-any.whl#sha256=4d956e262f5ea31d4cc00fd42f59008632f4ab688453f8683fa007276456f40c (from https://www.piwheels.org/simple/polyclonal/) 2023-10-17T13:47:35,429 Skipping link: No binaries permitted for polyclonal: https://www.piwheels.org/simple/polyclonal/polyclonal-6.3-py3-none-any.whl#sha256=57e76d27b7689c6ef1b0dfe98ebc462c65ba853bca5fdc815ffe772f89b556d1 (from https://www.piwheels.org/simple/polyclonal/) 2023-10-17T13:47:35,430 Skipping link: No binaries permitted for polyclonal: https://www.piwheels.org/simple/polyclonal/polyclonal-6.2-py3-none-any.whl#sha256=36feeea2df70b6a12d7305335755b01221af70764abeb4ed90099221ea09b7a4 (from https://www.piwheels.org/simple/polyclonal/) 2023-10-17T13:47:35,430 Skipping link: No binaries permitted for polyclonal: https://www.piwheels.org/simple/polyclonal/polyclonal-6.1-py3-none-any.whl#sha256=fdf606c6ad6c275ffa484546632c5b6e7c74c62b473713fae0a783df9da8cb5e (from https://www.piwheels.org/simple/polyclonal/) 2023-10-17T13:47:35,431 Skipping link: No binaries permitted for polyclonal: https://www.piwheels.org/simple/polyclonal/polyclonal-6.0-py3-none-any.whl#sha256=af49f02801513e1d3ceb18b5d7ca59fa4929211bb40f3890f0f9048887668080 (from https://www.piwheels.org/simple/polyclonal/) 2023-10-17T13:47:35,431 Skipping link: No binaries permitted for polyclonal: https://www.piwheels.org/simple/polyclonal/polyclonal-5.3-py3-none-any.whl#sha256=d89416c1deb1d32a8edc9747586e8e666faa2e07a0f9cb1a006cf72005765cfc (from https://www.piwheels.org/simple/polyclonal/) 2023-10-17T13:47:35,432 Skipping link: No binaries permitted for polyclonal: https://www.piwheels.org/simple/polyclonal/polyclonal-5.2-py3-none-any.whl#sha256=8f986ab85b28baea19c133e1b513e5bd17566413dad734bb65ec84a0f420b026 (from https://www.piwheels.org/simple/polyclonal/) 2023-10-17T13:47:35,432 Skipping link: No binaries permitted for polyclonal: https://www.piwheels.org/simple/polyclonal/polyclonal-5.1-py3-none-any.whl#sha256=5459d4631104517fd905bf897bb96bb7cd9251d6eaa5eedb3636ad01c2f5880e (from https://www.piwheels.org/simple/polyclonal/) 2023-10-17T13:47:35,433 Skipping link: not a file: https://www.piwheels.org/simple/polyclonal/ 2023-10-17T13:47:35,434 Skipping link: not a file: https://pypi.org/simple/polyclonal/ 2023-10-17T13:47:35,453 Given no hashes to check 1 links for project 'polyclonal': discarding no candidates 2023-10-17T13:47:35,471 Collecting polyclonal==6.8 2023-10-17T13:47:35,474 Created temporary directory: /tmp/pip-unpack-pgydy2jk 2023-10-17T13:47:35,701 Downloading polyclonal-6.8.tar.gz (39.5 MB) 2023-10-17T13:47:49,023 Added polyclonal==6.8 from https://files.pythonhosted.org/packages/a5/49/188bc827eaf128e8529d2cce09f2d51218f3490ebc8502346fd7ab381702/polyclonal-6.8.tar.gz to build tracker '/tmp/pip-build-tracker-qdjmz5o7' 2023-10-17T13:47:49,024 Running setup.py (path:/tmp/pip-wheel-zmjbkq61/polyclonal_b2c07f362cc8413b9cdb09c321864d82/setup.py) egg_info for package polyclonal 2023-10-17T13:47:49,025 Created temporary directory: /tmp/pip-pip-egg-info-8kemvt45 2023-10-17T13:47:49,026 Preparing metadata (setup.py): started 2023-10-17T13:47:49,028 Running command python setup.py egg_info 2023-10-17T13:47:50,074 running egg_info 2023-10-17T13:47:50,075 creating /tmp/pip-pip-egg-info-8kemvt45/polyclonal.egg-info 2023-10-17T13:47:50,099 writing /tmp/pip-pip-egg-info-8kemvt45/polyclonal.egg-info/PKG-INFO 2023-10-17T13:47:50,102 writing dependency_links to /tmp/pip-pip-egg-info-8kemvt45/polyclonal.egg-info/dependency_links.txt 2023-10-17T13:47:50,104 writing requirements to /tmp/pip-pip-egg-info-8kemvt45/polyclonal.egg-info/requires.txt 2023-10-17T13:47:50,105 writing top-level names to /tmp/pip-pip-egg-info-8kemvt45/polyclonal.egg-info/top_level.txt 2023-10-17T13:47:50,107 writing manifest file '/tmp/pip-pip-egg-info-8kemvt45/polyclonal.egg-info/SOURCES.txt' 2023-10-17T13:47:50,182 reading manifest file '/tmp/pip-pip-egg-info-8kemvt45/polyclonal.egg-info/SOURCES.txt' 2023-10-17T13:47:50,183 adding license file 'LICENSE.txt' 2023-10-17T13:47:50,185 writing manifest file '/tmp/pip-pip-egg-info-8kemvt45/polyclonal.egg-info/SOURCES.txt' 2023-10-17T13:47:50,293 Preparing metadata (setup.py): finished with status 'done' 2023-10-17T13:47:50,297 Source in /tmp/pip-wheel-zmjbkq61/polyclonal_b2c07f362cc8413b9cdb09c321864d82 has version 6.8, which satisfies requirement polyclonal==6.8 from https://files.pythonhosted.org/packages/a5/49/188bc827eaf128e8529d2cce09f2d51218f3490ebc8502346fd7ab381702/polyclonal-6.8.tar.gz 2023-10-17T13:47:50,298 Removed polyclonal==6.8 from https://files.pythonhosted.org/packages/a5/49/188bc827eaf128e8529d2cce09f2d51218f3490ebc8502346fd7ab381702/polyclonal-6.8.tar.gz from build tracker '/tmp/pip-build-tracker-qdjmz5o7' 2023-10-17T13:47:50,302 Created temporary directory: /tmp/pip-unpack-i7ain7m3 2023-10-17T13:47:50,303 Created temporary directory: /tmp/pip-unpack-_7_kvnjp 2023-10-17T13:47:50,318 Building wheels for collected packages: polyclonal 2023-10-17T13:47:50,322 Created temporary directory: /tmp/pip-wheel-0fd0g43a 2023-10-17T13:47:50,323 Building wheel for polyclonal (setup.py): started 2023-10-17T13:47:50,324 Destination directory: /tmp/pip-wheel-0fd0g43a 2023-10-17T13:47:50,325 Running command python setup.py bdist_wheel 2023-10-17T13:47:51,312 running bdist_wheel 2023-10-17T13:47:51,408 running build 2023-10-17T13:47:51,408 running build_py 2023-10-17T13:47:51,436 creating build 2023-10-17T13:47:51,436 creating build/lib 2023-10-17T13:47:51,437 creating build/lib/polyclonal 2023-10-17T13:47:51,438 copying polyclonal/polyclonal.py -> build/lib/polyclonal 2023-10-17T13:47:51,443 copying polyclonal/utils.py -> build/lib/polyclonal 2023-10-17T13:47:51,445 copying polyclonal/alphabets.py -> build/lib/polyclonal 2023-10-17T13:47:51,447 copying polyclonal/pdb_utils.py -> build/lib/polyclonal 2023-10-17T13:47:51,449 copying polyclonal/polyclonal_collection.py -> build/lib/polyclonal 2023-10-17T13:47:51,453 copying polyclonal/__init__.py -> build/lib/polyclonal 2023-10-17T13:47:51,454 copying polyclonal/plot.py -> build/lib/polyclonal 2023-10-17T13:47:51,483 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-10-17T13:47:51,483 !! 2023-10-17T13:47:51,484 ******************************************************************************** 2023-10-17T13:47:51,485 Please avoid running ``setup.py`` directly. 2023-10-17T13:47:51,486 Instead, use pypa/build, pypa/installer or other 2023-10-17T13:47:51,486 standards-based tools. 2023-10-17T13:47:51,487 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-10-17T13:47:51,488 ******************************************************************************** 2023-10-17T13:47:51,489 !! 2023-10-17T13:47:51,490 self.initialize_options() 2023-10-17T13:47:51,512 installing to build/bdist.linux-armv7l/wheel 2023-10-17T13:47:51,513 running install 2023-10-17T13:47:51,538 running install_lib 2023-10-17T13:47:51,563 creating build/bdist.linux-armv7l 2023-10-17T13:47:51,563 creating build/bdist.linux-armv7l/wheel 2023-10-17T13:47:51,565 creating build/bdist.linux-armv7l/wheel/polyclonal 2023-10-17T13:47:51,567 copying build/lib/polyclonal/polyclonal.py -> build/bdist.linux-armv7l/wheel/polyclonal 2023-10-17T13:47:51,572 copying build/lib/polyclonal/utils.py -> build/bdist.linux-armv7l/wheel/polyclonal 2023-10-17T13:47:51,575 copying build/lib/polyclonal/alphabets.py -> build/bdist.linux-armv7l/wheel/polyclonal 2023-10-17T13:47:51,578 copying build/lib/polyclonal/pdb_utils.py -> build/bdist.linux-armv7l/wheel/polyclonal 2023-10-17T13:47:51,581 copying build/lib/polyclonal/polyclonal_collection.py -> build/bdist.linux-armv7l/wheel/polyclonal 2023-10-17T13:47:51,584 copying build/lib/polyclonal/__init__.py -> build/bdist.linux-armv7l/wheel/polyclonal 2023-10-17T13:47:51,586 copying build/lib/polyclonal/plot.py -> build/bdist.linux-armv7l/wheel/polyclonal 2023-10-17T13:47:51,589 running install_egg_info 2023-10-17T13:47:51,651 running egg_info 2023-10-17T13:47:51,675 writing polyclonal.egg-info/PKG-INFO 2023-10-17T13:47:51,679 writing dependency_links to polyclonal.egg-info/dependency_links.txt 2023-10-17T13:47:51,681 writing requirements to polyclonal.egg-info/requires.txt 2023-10-17T13:47:51,682 writing top-level names to polyclonal.egg-info/top_level.txt 2023-10-17T13:47:51,709 reading manifest file 'polyclonal.egg-info/SOURCES.txt' 2023-10-17T13:47:51,720 adding license file 'LICENSE.txt' 2023-10-17T13:47:51,725 writing manifest file 'polyclonal.egg-info/SOURCES.txt' 2023-10-17T13:47:51,727 Copying polyclonal.egg-info to build/bdist.linux-armv7l/wheel/polyclonal-6.8-py3.11.egg-info 2023-10-17T13:47:51,736 running install_scripts 2023-10-17T13:47:51,751 creating build/bdist.linux-armv7l/wheel/polyclonal-6.8.dist-info/WHEEL 2023-10-17T13:47:51,754 creating '/tmp/pip-wheel-0fd0g43a/polyclonal-6.8-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-10-17T13:47:51,757 adding 'polyclonal/__init__.py' 2023-10-17T13:47:51,758 adding 'polyclonal/alphabets.py' 2023-10-17T13:47:51,762 adding 'polyclonal/pdb_utils.py' 2023-10-17T13:47:51,768 adding 'polyclonal/plot.py' 2023-10-17T13:47:51,783 adding 'polyclonal/polyclonal.py' 2023-10-17T13:47:51,790 adding 'polyclonal/polyclonal_collection.py' 2023-10-17T13:47:51,793 adding 'polyclonal/utils.py' 2023-10-17T13:47:51,796 adding 'polyclonal-6.8.dist-info/LICENSE.txt' 2023-10-17T13:47:51,797 adding 'polyclonal-6.8.dist-info/METADATA' 2023-10-17T13:47:51,799 adding 'polyclonal-6.8.dist-info/WHEEL' 2023-10-17T13:47:51,800 adding 'polyclonal-6.8.dist-info/top_level.txt' 2023-10-17T13:47:51,801 adding 'polyclonal-6.8.dist-info/RECORD' 2023-10-17T13:47:51,804 removing build/bdist.linux-armv7l/wheel 2023-10-17T13:47:51,917 Building wheel for polyclonal (setup.py): finished with status 'done' 2023-10-17T13:47:51,921 Created wheel for polyclonal: filename=polyclonal-6.8-py3-none-any.whl size=65259 sha256=f8e376b8ccff17234defc1b7401b70b74cad82314c5aa0740eaba37d5e975155 2023-10-17T13:47:51,922 Stored in directory: /tmp/pip-ephem-wheel-cache-gdr06wqf/wheels/10/ba/52/407fe2d95fc1f2493ff219279344ea0b3c80b1142b2de29ef9 2023-10-17T13:47:51,932 Successfully built polyclonal 2023-10-17T13:47:51,936 Removed build tracker: '/tmp/pip-build-tracker-qdjmz5o7'