2023-10-19T16:58:04,665 Created temporary directory: /tmp/pip-build-tracker-39xj0nju
2023-10-19T16:58:04,666 Initialized build tracking at /tmp/pip-build-tracker-39xj0nju
2023-10-19T16:58:04,667 Created build tracker: /tmp/pip-build-tracker-39xj0nju
2023-10-19T16:58:04,667 Entered build tracker: /tmp/pip-build-tracker-39xj0nju
2023-10-19T16:58:04,668 Created temporary directory: /tmp/pip-wheel-tipwvunx
2023-10-19T16:58:04,671 Created temporary directory: /tmp/pip-ephem-wheel-cache-krd_95l9
2023-10-19T16:58:04,693 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-10-19T16:58:04,697 2 location(s) to search for versions of mdapy:
2023-10-19T16:58:04,697 * https://pypi.org/simple/mdapy/
2023-10-19T16:58:04,697 * https://www.piwheels.org/simple/mdapy/
2023-10-19T16:58:04,697 Fetching project page and analyzing links: https://pypi.org/simple/mdapy/
2023-10-19T16:58:04,698 Getting page https://pypi.org/simple/mdapy/
2023-10-19T16:58:04,700 Found index url https://pypi.org/simple/
2023-10-19T16:58:04,929 Fetched page https://pypi.org/simple/mdapy/ as application/vnd.pypi.simple.v1+json
2023-10-19T16:58:04,964   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/f8/b3/fa3165f5371bf25f330d582412ce6111d81d16e1068c6a52fff3aeed48fd/mdapy-0.7.6-cp310-cp310-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7)
2023-10-19T16:58:04,965   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/af/78/2606a229dc0aeee9d63eecc4aaa6768aa4d2bb0a78564e452d46b970a43a/mdapy-0.7.6-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7)
2023-10-19T16:58:04,965   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/73/6a/640a3d6e6e3c97d06a1bf73d2b6904c3a7f1b1a9c11de29ae1e0476fe7c6/mdapy-0.7.6-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7)
2023-10-19T16:58:04,966   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/66/fc/4d83046add95582345104742c12fb8e2a6b3a8968732fe31c8579f5a97ef/mdapy-0.7.6-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7)
2023-10-19T16:58:04,966   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/07/5c/7a729f1a535afa699f6dfb3b0397896298f5657a64b71084398cf6cfdc49/mdapy-0.7.6-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7)
2023-10-19T16:58:04,967   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/d5/75/b981c88ef7545d76c6319a483c42086b789bf60aa8ee28eb0607f5f8b154/mdapy-0.7.6-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7)
2023-10-19T16:58:04,968   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/ce/f4/0990d772c757a937e56751013af5908d37cff6ecb567d08ce583492c9d1b/mdapy-0.7.6-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7)
2023-10-19T16:58:04,969   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/42/e6/0e929a981723be23cf81fcc63c7b3c01ca77c8922750a4cbbbb83e267c79/mdapy-0.7.6-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7)
2023-10-19T16:58:04,969   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/14/2c/f0eb260b52cfb221f26d5c334067e6d40e62ee530257b26202bc6db7d1a5/mdapy-0.7.7-cp310-cp310-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7)
2023-10-19T16:58:04,970   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/34/8a/93cd6fbd746a8c595d4af152a3dbcf030e6d28659886cd07a4b2f1e8e1c2/mdapy-0.7.7-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7)
2023-10-19T16:58:04,970   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/bc/ad/c7c9bdfaa2b1fdb0053910f21cf3f7ff576a2880a6d6c17767ea9232faa3/mdapy-0.7.7-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7)
2023-10-19T16:58:04,971   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/f3/bf/9be55b37f2e836515bc7f1b8e9668dc5e2fd023cb79656647fbed4d1f1be/mdapy-0.7.7-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7)
2023-10-19T16:58:04,972   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/8b/a9/45c25f4ab8b7ab05ec032f1dfa62c1d7804fa146c2b212b4daf059ddc6a2/mdapy-0.7.7-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7)
2023-10-19T16:58:04,972   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/fb/54/c2934735ce4f6ea9518a1a247ffe136ce0c332794680f5fa0ea102efe3f6/mdapy-0.7.7-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7)
2023-10-19T16:58:04,973   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/98/a0/c93988cb06071f1bffd1456c70ff7d4c44097118770f0b48ff6258eb2e70/mdapy-0.7.7-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7)
2023-10-19T16:58:04,973   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/63/57/d03d7cc497f604328eebe8969f74599617857dd3d2ab3625273b1c7186de/mdapy-0.7.7-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7)
2023-10-19T16:58:04,974   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/6d/8c/4139c161385c8f21777eb003899d40ca9da4223cc323930d278703c99d7c/mdapy-0.7.8-cp310-cp310-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,974   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/47/83/350174a1238e5d982e7d5a58966ffb1b142fb1c65d15359d8b58b3455b7a/mdapy-0.7.8-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,975   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/52/f6/c3fe6f103679c6ad7285525645c4bf14ae435a289b08a3830b374a81cecf/mdapy-0.7.8-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,975   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/b2/50/dbac02eb7159c6e96f0d5bbb97ae538f52fc7ec25423e600caa81aeab089/mdapy-0.7.8-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,976   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/27/48/dc4cb441bf2e06da3eecfaa9b13554f8a6282312c842f271b6bf3059e331/mdapy-0.7.8-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,976   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/14/24/39fced0a574be250cfeb26e75acf14336ffb3481dc072b7eb6afcf8ad699/mdapy-0.7.8-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,977   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/f6/ea/8e024914da8f894f8d5ab36f8ff5a1e6eadbd92fdc38210b84ae7e2f17ce/mdapy-0.7.8-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,978   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/2e/f7/f4a7060466bc8fa883d1228fca3f4feef9b4c1709d2f9f8211e5268d8a10/mdapy-0.7.8-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,978   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/e0/da/f6c45682567bb4ad304ba49d204bc5ddeba01492a0a019f66b3f369e3bfc/mdapy-0.7.9-cp310-cp310-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,979   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/09/bc/81f2af61d79dd67d9b7f0c6943ebb540637e3d9976395e102d98c67b2c3a/mdapy-0.7.9-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,980   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/64/37/535f581360ef0de48cfffd4b513b2aa8f0614c98cbe5feef87a5f3930bd8/mdapy-0.7.9-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,980   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/f9/b2/72561dbdc5fa58ef0d747248bd751325b02c8d4c7baa1519bd09d57bbc8e/mdapy-0.7.9-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,981   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/13/4e/be694bee4fffcd3f5600fd814b608c09e61b3c46a13fc84d4c521f6e6d1e/mdapy-0.7.9-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,981   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/41/d8/817cc28ba5a64d9a1b521ef81d4111a989d0e53bf4cc8ec13dd96ee8f161/mdapy-0.7.9-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,982   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/cf/40/508593c043867dd44cce50205b0655c5ee126e7e3970c9d3253977ab12ac/mdapy-0.7.9-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,982   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/bd/0e/9e3f7b468657d407e2653ba96fc2bcd2e856b44f11f3d06c9700f505f7c7/mdapy-0.7.9-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,983   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/f4/d4/e94aecf437bd2b02a99fe0ecc0303b2a6f5b21a6d50d68c20cfacf00f735/mdapy-0.8.0-cp310-cp310-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,983   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/33/8e/c444172b99e9d5d54348c6f7eb9a11d963d528272e43391e655d098f5bd2/mdapy-0.8.0-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,984   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/fd/1b/5c9bb22fa93027573b63a554bad525bda0259f17e393f4bc1c685f2a06b2/mdapy-0.8.0-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,985   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/f3/2b/84e3176d2875e2a7ab804f4bbc308361df4186cf55d4d75208570ce902d7/mdapy-0.8.0-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,985   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/c5/e4/9f8e21909375e257a0a4169b5ff6fda95d034e69a29ad1240490e40ec71c/mdapy-0.8.0-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,986   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/6a/20/4285e0e556ad71a6fdfb6e6cb228e929e2d025e62a03536795ed241e7132/mdapy-0.8.0-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,987   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/50/b4/b784b48cc5c90c202a43a55677916d1d34daa50eb90a31695fc0dc0f350f/mdapy-0.8.0-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,987   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/94/49/29a1c6388179a2e3b8ae47e5565dd7b3958a3426f17a0c032e60c8529afe/mdapy-0.8.0-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,988   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/cb/a2/2970eff09fbbc3e6ca0b86b8f007f5392396c4431e763662beeb9c05c598/mdapy-0.8.1-cp310-cp310-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,989   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/04/b1/fb775fe8e9aab902673c6e89afff8fc81ef20ff52c956389c8bdf178179b/mdapy-0.8.1-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,989   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/f3/4c/b4c6f20c5dfa1bd3faf913e33d5961f2f520596e3ad806d080f28e6c6894/mdapy-0.8.1-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,990   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/da/a6/de9aed49421522acd9f850efd6343afb9bfda5efb06772a590213cacac67/mdapy-0.8.1-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,990   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/12/76/d6b1d2d31526f83657e88192e5ce299cbd0ed3873b0a7222a5bea410c298/mdapy-0.8.1-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,991   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/b4/04/deac68a7e3bb7177b6c291cdf79816925b5eca86b3944ae88161dfa2451a/mdapy-0.8.1-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,991   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/23/2c/c070a0d0c26ce724af43da27e7caf9ba0f28f853cc819ce9b158e8920082/mdapy-0.8.1-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,992   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/7c/e3/da58d605b1cce44d8b06cffff6d1050737ad7d111c8108adf325033e630d/mdapy-0.8.1-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,992   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/05/11/8973e6fa040463d0470766a2d89576ffec86c445c255859d9c248f61547b/mdapy-0.8.2-cp310-cp310-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,993   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/5b/09/a5a4f04c6529165649b6967f86b6e1706dab1b674eff4104e0c283d6c147/mdapy-0.8.2-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,994   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/0f/36/00fee7bde5bd5d933508143fd8c80aed0b34473bbf5de1022178af0ee9de/mdapy-0.8.2-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,994   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/51/6a/023cf97d1bb6eef606a842903be04052f75e7ca8bdc8b2db737ca0b68072/mdapy-0.8.2-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
2023-10-19T16:58:04,995   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/56/0a/f518f3e3aa23d54b1a59f49aafcba6e7150da81879d8bed3e74dd8c995dd/mdapy-0.8.2-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11)
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2023-10-19T16:58:05,063   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/d6/7e/558a72be24b8d0afaf8a9bfcbb3f95588d7f30c65f9fc21d457d9ed61406/mdapy-0.9.1-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,064   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/a5/14/a5de85f8a33195c4b86c12e2db6520acb1ae65b38529d6d6564a37cc69f0/mdapy-0.9.1-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,064   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/53/38/8cb33caff6121acc58e279293556f34c07641566c484f72b7e688fa27944/mdapy-0.9.1-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,065   Found link https://files.pythonhosted.org/packages/6f/b5/7084f1afd8fc1289e79ae8bcdffaf1d930e71d56c23a02d10ed0d028fc16/mdapy-0.9.1.tar.gz (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12), version: 0.9.1
2023-10-19T16:58:05,066   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/91/b6/6262b22c32f8d09b68de4936f7581c4050580641b4eb5b44caa5045f89cc/mdapy-0.9.2-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,067   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/67/12/f62dfbf12bfe8548de8736727dd45ec8d84489309061bc5a676bbf4a9a87/mdapy-0.9.2-cp310-cp310-manylinux_2_35_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,067   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/68/fa/6c00cf9bf5e7521e2ad271d285be881d82f075f68f521efe8cd4543bd79b/mdapy-0.9.2-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,068   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/cf/31/674cf7891bb6ad2c28c7f4c7c80fcdc50142750ed6cd6731ee77ce28ffa4/mdapy-0.9.2-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,068   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/ee/a8/848e8ff1034770409ea0b4d78c503b6c1441216957672fa7b0f083a4c2bf/mdapy-0.9.2-cp311-cp311-manylinux_2_35_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,069   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/d0/e3/5e101f6af3137dbaeed177568d050e0eb2046d1afdcdc0ae63942f78cd42/mdapy-0.9.2-cp311-cp311-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,069   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/59/71/d15dd9c968dcf2246c43edabb2d73f438471001bd5f11f33cad49ec7426d/mdapy-0.9.2-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,070   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/7b/be/2f38256705630e67ad47686d369b6f72d09bf5542c701aa617497746e0f7/mdapy-0.9.2-cp38-cp38-manylinux_2_35_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,071   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/d7/95/776cf6da088c9a4210a149b53560f9ccf67c3afd97e05bde738bb3328e65/mdapy-0.9.2-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,071   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/a2/64/10427126954fc888c231cfcfd274e57ebc5d7517b927311d5ac8fce46079/mdapy-0.9.2-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,072   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/9a/81/7963b43da08387322c6da471a2cc3de599474b1a2eefce0482d8b8fab8d7/mdapy-0.9.2-cp39-cp39-manylinux_2_35_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,072   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/6c/86/04b2915a9e2db3b5b5d51edfc5c4c866a56f72e03eedbfe3e9a54744e6fe/mdapy-0.9.2-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,074   Found link https://files.pythonhosted.org/packages/d6/dd/8d32f18ff4bc2b2373ce0af8053c9c8288f08ee3e66ad49ab19c4c2134e1/mdapy-0.9.2.tar.gz (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12), version: 0.9.2
2023-10-19T16:58:05,074   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/5e/59/cca60fe7d2904b7e7c5ce9c4fb493ed6056d8a61d96e4b9a4bf76cf5191c/mdapy-0.9.3-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,075   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/2f/32/c3d6f23e67c9fcc4a0fc0dac2b4ad5207671147ffec00cd635e3b7c1053a/mdapy-0.9.3-cp310-cp310-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,075   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/2b/d5/fce1e08cd8c6e1b41fafda6fab5c5a27bb185cffa52347f337b64f86e8cc/mdapy-0.9.3-cp310-cp310-manylinux_2_35_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,076   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/42/46/2d71d7411d1440835f57a7885b0ce38880bf382b967a5a7fb5d431ee39f2/mdapy-0.9.3-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,077   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/ce/80/a9e2632e1bf87b4ce8840bad36b5713a229177afadb8b6759eda851a06f0/mdapy-0.9.3-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,077   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/0b/a5/8994b3996468abe457096caba8bd3dc734f0b351eb6cbf936f88c54a0e85/mdapy-0.9.3-cp311-cp311-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,078   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/f9/1c/8bc2260be8f55f613d53c77755ea3565044838eeaf3f8d576f3fe5b15749/mdapy-0.9.3-cp311-cp311-manylinux_2_35_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,079   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/19/b1/7d16128bd710e460ff6cdccd1d8597da225944901881d071f3b38163d668/mdapy-0.9.3-cp311-cp311-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,079   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/c7/60/0d01169302bbd2f31a7702c37c23bc1c97d996c62fa7fb161e1129ad91b4/mdapy-0.9.3-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,080   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/fe/d8/764f1dbe6df6d71769bb15fd967eeadacc76ac7c51627eaeb3a3e80d2214/mdapy-0.9.3-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,081   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/9b/a7/427d866424ef980c6e3620a634e81a06ff0b37607351a1007486dbac7e29/mdapy-0.9.3-cp38-cp38-manylinux_2_35_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,081   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/71/b5/bf8c09000dcd0b81b5f26941cb5ad05004d11b418276506fdd36a6eeee30/mdapy-0.9.3-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,082   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/dc/9e/b65ded1c24a0506b4c227ed3593b4d1aee703bdf1105e27955b5916282e2/mdapy-0.9.3-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,083   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/67/5b/a04398a18958d4e1c17c9952dc8f58095bc3f494713e01f2675de2d4d14e/mdapy-0.9.3-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,083   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/35/75/73ad510f452b893a4e0136ff5985900a80c7ae4c4cd51a08fce737994944/mdapy-0.9.3-cp39-cp39-manylinux_2_35_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,084   Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/8a/50/badd18be624b4d62e14b464c4d0e23558b86c5815b3e9e08536db8e41433/mdapy-0.9.3-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,085   Found link https://files.pythonhosted.org/packages/bb/16/db6b24411387e4d5c6da3aac6116ec416ef87fa1cac7416330486c7fcca4/mdapy-0.9.3.tar.gz (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12), version: 0.9.3
2023-10-19T16:58:05,086 Fetching project page and analyzing links: https://www.piwheels.org/simple/mdapy/
2023-10-19T16:58:05,086 Getting page https://www.piwheels.org/simple/mdapy/
2023-10-19T16:58:05,087 Found index url https://www.piwheels.org/simple/
2023-10-19T16:58:05,250 Fetched page https://www.piwheels.org/simple/mdapy/ as text/html
2023-10-19T16:58:05,254   Skipping link: No binaries permitted for mdapy: https://www.piwheels.org/simple/mdapy/mdapy-0.9.2-cp39-cp39-linux_armv7l.whl#sha256=bdfb377dcc2463dc346ce1b63cfcf791a2ebfb039812edd97171e427316fab54 (from https://www.piwheels.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,254   Skipping link: No binaries permitted for mdapy: https://www.piwheels.org/simple/mdapy/mdapy-0.9.2-cp39-cp39-linux_armv6l.whl#sha256=bdfb377dcc2463dc346ce1b63cfcf791a2ebfb039812edd97171e427316fab54 (from https://www.piwheels.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,255   Skipping link: No binaries permitted for mdapy: https://www.piwheels.org/simple/mdapy/mdapy-0.9.2-cp311-cp311-linux_armv7l.whl#sha256=3b806283528bd30dd065430bcac469fdfa9e9c3c51b68bdae3dd21bd50b224e7 (from https://www.piwheels.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,256   Skipping link: No binaries permitted for mdapy: https://www.piwheels.org/simple/mdapy/mdapy-0.9.2-cp311-cp311-linux_armv6l.whl#sha256=3b806283528bd30dd065430bcac469fdfa9e9c3c51b68bdae3dd21bd50b224e7 (from https://www.piwheels.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,257   Skipping link: No binaries permitted for mdapy: https://www.piwheels.org/simple/mdapy/mdapy-0.9.1-cp39-cp39-linux_armv7l.whl#sha256=1f00cd684879a3b96744cdb2afedbc5fbca471c4329dd972df12eda72573861d (from https://www.piwheels.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,257   Skipping link: No binaries permitted for mdapy: https://www.piwheels.org/simple/mdapy/mdapy-0.9.1-cp39-cp39-linux_armv6l.whl#sha256=1f00cd684879a3b96744cdb2afedbc5fbca471c4329dd972df12eda72573861d (from https://www.piwheels.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,258   Skipping link: No binaries permitted for mdapy: https://www.piwheels.org/simple/mdapy/mdapy-0.9.1-cp311-cp311-linux_armv7l.whl#sha256=4a614bb384e0b45f19f4a1b65ea1bab28abda3e4b1fa3cba4c7160385983f16e (from https://www.piwheels.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,258   Skipping link: No binaries permitted for mdapy: https://www.piwheels.org/simple/mdapy/mdapy-0.9.1-cp311-cp311-linux_armv6l.whl#sha256=4a614bb384e0b45f19f4a1b65ea1bab28abda3e4b1fa3cba4c7160385983f16e (from https://www.piwheels.org/simple/mdapy/) (requires-python:>=3.8,<3.12)
2023-10-19T16:58:05,259 Skipping link: not a file: https://www.piwheels.org/simple/mdapy/
2023-10-19T16:58:05,260 Skipping link: not a file: https://pypi.org/simple/mdapy/
2023-10-19T16:58:05,279 Given no hashes to check 1 links for project 'mdapy': discarding no candidates
2023-10-19T16:58:05,297 Collecting mdapy==0.9.3
2023-10-19T16:58:05,299   Created temporary directory: /tmp/pip-unpack-eqw42zvg
2023-10-19T16:58:05,529   Downloading mdapy-0.9.3.tar.gz (4.1 MB)
2023-10-19T16:58:07,115   Added mdapy==0.9.3 from https://files.pythonhosted.org/packages/bb/16/db6b24411387e4d5c6da3aac6116ec416ef87fa1cac7416330486c7fcca4/mdapy-0.9.3.tar.gz to build tracker '/tmp/pip-build-tracker-39xj0nju'
2023-10-19T16:58:07,120   Created temporary directory: /tmp/pip-build-env-qmlv6s3d
2023-10-19T16:58:07,124   Installing build dependencies: started
2023-10-19T16:58:07,126   Running command pip subprocess to install build dependencies
2023-10-19T16:58:08,293   Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2023-10-19T16:58:08,797   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-10-19T16:58:10,348   Collecting setuptools
2023-10-19T16:58:10,411     Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.2.2-py3-none-any.whl (807 kB)
2023-10-19T16:58:10,643   Collecting wheel
2023-10-19T16:58:10,660     Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB)
2023-10-19T16:58:10,931   Collecting pybind11
2023-10-19T16:58:10,960     Using cached https://www.piwheels.org/simple/pybind11/pybind11-2.11.1-py3-none-any.whl (227 kB)
2023-10-19T16:58:13,532   Installing collected packages: wheel, setuptools, pybind11
2023-10-19T16:58:13,774     Creating /tmp/pip-build-env-qmlv6s3d/overlay/local/bin
2023-10-19T16:58:13,777     changing mode of /tmp/pip-build-env-qmlv6s3d/overlay/local/bin/wheel to 755
2023-10-19T16:58:16,119     changing mode of /tmp/pip-build-env-qmlv6s3d/overlay/local/bin/pybind11-config to 755
2023-10-19T16:58:16,142   Successfully installed pybind11-2.11.1 setuptools-68.2.2 wheel-0.41.2

2023-10-19T16:58:16,435   [notice] A new release of pip is available: 23.2.1 -> 23.3
2023-10-19T16:58:16,435   [notice] To update, run: python3 -m pip install --upgrade pip
2023-10-19T16:58:16,711   Installing build dependencies: finished with status 'done'
2023-10-19T16:58:16,714   Getting requirements to build wheel: started
2023-10-19T16:58:16,715   Running command Getting requirements to build wheel
2023-10-19T16:58:17,248   running egg_info
2023-10-19T16:58:17,252   writing mdapy.egg-info/PKG-INFO
2023-10-19T16:58:17,256   writing dependency_links to mdapy.egg-info/dependency_links.txt
2023-10-19T16:58:17,258   writing requirements to mdapy.egg-info/requires.txt
2023-10-19T16:58:17,259   writing top-level names to mdapy.egg-info/top_level.txt
2023-10-19T16:58:17,282   reading manifest file 'mdapy.egg-info/SOURCES.txt'
2023-10-19T16:58:17,300   adding license file 'LICENSE'
2023-10-19T16:58:17,307   writing manifest file 'mdapy.egg-info/SOURCES.txt'
2023-10-19T16:58:17,387   Getting requirements to build wheel: finished with status 'done'
2023-10-19T16:58:17,397   Created temporary directory: /tmp/pip-modern-metadata-mvyccmhr
2023-10-19T16:58:17,399   Preparing metadata (pyproject.toml): started
2023-10-19T16:58:17,401   Running command Preparing metadata (pyproject.toml)
2023-10-19T16:58:17,894   running dist_info
2023-10-19T16:58:17,913   creating /tmp/pip-modern-metadata-mvyccmhr/mdapy.egg-info
2023-10-19T16:58:17,918   writing /tmp/pip-modern-metadata-mvyccmhr/mdapy.egg-info/PKG-INFO
2023-10-19T16:58:17,922   writing dependency_links to /tmp/pip-modern-metadata-mvyccmhr/mdapy.egg-info/dependency_links.txt
2023-10-19T16:58:17,924   writing requirements to /tmp/pip-modern-metadata-mvyccmhr/mdapy.egg-info/requires.txt
2023-10-19T16:58:17,925   writing top-level names to /tmp/pip-modern-metadata-mvyccmhr/mdapy.egg-info/top_level.txt
2023-10-19T16:58:17,927   writing manifest file '/tmp/pip-modern-metadata-mvyccmhr/mdapy.egg-info/SOURCES.txt'
2023-10-19T16:58:17,945   reading manifest file '/tmp/pip-modern-metadata-mvyccmhr/mdapy.egg-info/SOURCES.txt'
2023-10-19T16:58:17,948   adding license file 'LICENSE'
2023-10-19T16:58:17,950   writing manifest file '/tmp/pip-modern-metadata-mvyccmhr/mdapy.egg-info/SOURCES.txt'
2023-10-19T16:58:17,951   creating '/tmp/pip-modern-metadata-mvyccmhr/mdapy-0.9.3.dist-info'
2023-10-19T16:58:18,138   Preparing metadata (pyproject.toml): finished with status 'done'
2023-10-19T16:58:18,143   Source in /tmp/pip-wheel-tipwvunx/mdapy_2ceaf36fee2345f49b17d2c9243fcfa1 has version 0.9.3, which satisfies requirement mdapy==0.9.3 from https://files.pythonhosted.org/packages/bb/16/db6b24411387e4d5c6da3aac6116ec416ef87fa1cac7416330486c7fcca4/mdapy-0.9.3.tar.gz
2023-10-19T16:58:18,144   Removed mdapy==0.9.3 from https://files.pythonhosted.org/packages/bb/16/db6b24411387e4d5c6da3aac6116ec416ef87fa1cac7416330486c7fcca4/mdapy-0.9.3.tar.gz from build tracker '/tmp/pip-build-tracker-39xj0nju'
2023-10-19T16:58:18,150 Created temporary directory: /tmp/pip-unpack-s63x54na
2023-10-19T16:58:18,151 Created temporary directory: /tmp/pip-unpack-v1k4hslu
2023-10-19T16:58:18,164 Building wheels for collected packages: mdapy
2023-10-19T16:58:18,168   Created temporary directory: /tmp/pip-wheel-es83ft88
2023-10-19T16:58:18,169   Destination directory: /tmp/pip-wheel-es83ft88
2023-10-19T16:58:18,171   Building wheel for mdapy (pyproject.toml): started
2023-10-19T16:58:18,172   Running command Building wheel for mdapy (pyproject.toml)
2023-10-19T16:58:18,718   running bdist_wheel
2023-10-19T16:58:18,747   running build
2023-10-19T16:58:18,748   running build_py
2023-10-19T16:58:18,756   creating build
2023-10-19T16:58:18,756   creating build/lib.linux-armv7l-cpython-311
2023-10-19T16:58:18,757   creating build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,758   copying mdapy/entropy.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,761   copying mdapy/temperature.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,763   copying mdapy/replicate.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,765   copying mdapy/lindemann_parameter.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,767   copying mdapy/void_distribution.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,770   copying mdapy/eam_average.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,772   copying mdapy/polyhedral_template_matching.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,774   copying mdapy/tool_function.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,776   copying mdapy/plotset.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,778   copying mdapy/timer.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,779   copying mdapy/__init__.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,781   copying mdapy/warren_cowley_parameter.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,783   copying mdapy/potential.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,785   copying mdapy/lattice_maker.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,787   copying mdapy/centro_symmetry_parameter.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,789   copying mdapy/pigz.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,792   copying mdapy/neighbor.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,794   copying mdapy/nearest_neighbor.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,796   copying mdapy/load_save_data.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,798   copying mdapy/cluser_analysis.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,800   copying mdapy/ackland_jones_analysis.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,802   copying mdapy/identify_SFs_TBs.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,805   copying mdapy/common_neighbor_analysis.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,807   copying mdapy/spatial_binning.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,809   copying mdapy/common_neighbor_parameter.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,811   copying mdapy/steinhardt_bond_orientation.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,813   copying mdapy/calculator.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,815   copying mdapy/eam_generate.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,818   copying mdapy/voronoi_analysis.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,820   copying mdapy/pair_distribution.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,822   copying mdapy/system.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,825   copying mdapy/mean_squared_displacement.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,827   copying mdapy/create_polycrystalline.py -> build/lib.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,831   running build_ext
2023-10-19T16:58:18,837   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c flagcheck.cpp -o flagcheck.o -std=c++17
2023-10-19T16:58:18,917   building '_cluster_analysis' extension
2023-10-19T16:58:18,918   creating build/temp.linux-armv7l-cpython-311
2023-10-19T16:58:18,918   creating build/temp.linux-armv7l-cpython-311/mdapy
2023-10-19T16:58:18,919   creating build/temp.linux-armv7l-cpython-311/mdapy/cluster
2023-10-19T16:58:18,920   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-qmlv6s3d/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c mdapy/cluster/_cluster.cpp -o build/temp.linux-armv7l-cpython-311/mdapy/cluster/_cluster.o -std=c++17 -fvisibility=hidden -g0
2023-10-19T16:58:37,755   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/mdapy/cluster/_cluster.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/_cluster_analysis.cpython-311-arm-linux-gnueabihf.so
2023-10-19T16:58:38,005   building '_voronoi_analysis' extension
2023-10-19T16:58:38,006   creating build/temp.linux-armv7l-cpython-311/mdapy/voronoi
2023-10-19T16:58:38,006   creating build/temp.linux-armv7l-cpython-311/thirdparty
2023-10-19T16:58:38,007   creating build/temp.linux-armv7l-cpython-311/thirdparty/voro++
2023-10-19T16:58:38,008   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/voro++ -I/tmp/pip-build-env-qmlv6s3d/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c mdapy/voronoi/_voro.cpp -o build/temp.linux-armv7l-cpython-311/mdapy/voronoi/_voro.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp
2023-10-19T16:58:39,374   In file included from thirdparty/voro++/voro++.hh:337,
2023-10-19T16:58:39,374                    from mdapy/voronoi/_voro.cpp:6:
2023-10-19T16:58:39,375   thirdparty/voro++/iter_2d.hh:16:49: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,375      16 | class container_base_2d::iterator : public std::iterator<std::random_access_iterator_tag,c_info,int> {
2023-10-19T16:58:39,376         |                                                 ^~~~~~~~
2023-10-19T16:58:39,377   In file included from /usr/include/c++/12/bits/stl_algobase.h:65,
2023-10-19T16:58:39,378                    from /usr/include/c++/12/vector:60,
2023-10-19T16:58:39,379                    from thirdparty/voro++/common.hh:12,
2023-10-19T16:58:39,379                    from thirdparty/voro++/voro++.hh:318:
2023-10-19T16:58:39,380   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,380     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,381         |                                  ^~~~~~~~
2023-10-19T16:58:39,381   thirdparty/voro++/iter_2d.hh:21:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,382      21 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::pointer pointer;
2023-10-19T16:58:39,382         |                               ^~~~~~~~
2023-10-19T16:58:39,383   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,384     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,384         |                                  ^~~~~~~~
2023-10-19T16:58:39,385   thirdparty/voro++/iter_2d.hh:22:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,385      22 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::reference reference;
2023-10-19T16:58:39,386         |                               ^~~~~~~~
2023-10-19T16:58:39,386   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,387     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,388         |                                  ^~~~~~~~
2023-10-19T16:58:39,388   thirdparty/voro++/iter_2d.hh:23:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,389      23 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::difference_type difference_type;
2023-10-19T16:58:39,390         |                               ^~~~~~~~
2023-10-19T16:58:39,391   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,391     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,392         |                                  ^~~~~~~~
2023-10-19T16:58:39,393   thirdparty/voro++/iter_2d.hh:153:56: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,394     153 | class container_base_2d::iterator_subset : public std::iterator<std::random_access_iterator_tag,c_info,int> {
2023-10-19T16:58:39,394         |                                                        ^~~~~~~~
2023-10-19T16:58:39,395   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,396     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,397         |                                  ^~~~~~~~
2023-10-19T16:58:39,397   thirdparty/voro++/iter_2d.hh:155:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,398     155 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::pointer pointer;
2023-10-19T16:58:39,399         |                               ^~~~~~~~
2023-10-19T16:58:39,399   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,400     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,401         |                                  ^~~~~~~~
2023-10-19T16:58:39,402   thirdparty/voro++/iter_2d.hh:156:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,402     156 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::reference reference;
2023-10-19T16:58:39,403         |                               ^~~~~~~~
2023-10-19T16:58:39,404   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,404     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,405         |                                  ^~~~~~~~
2023-10-19T16:58:39,405   thirdparty/voro++/iter_2d.hh:157:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,406     157 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::difference_type difference_type;
2023-10-19T16:58:39,407         |                               ^~~~~~~~
2023-10-19T16:58:39,407   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,408     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,408         |                                  ^~~~~~~~
2023-10-19T16:58:39,409   thirdparty/voro++/iter_2d.hh:246:55: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,409     246 | class container_base_2d::iterator_order : public std::iterator<std::random_access_iterator_tag,c_info,int> {
2023-10-19T16:58:39,410         |                                                       ^~~~~~~~
2023-10-19T16:58:39,411   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,411     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,412         |                                  ^~~~~~~~
2023-10-19T16:58:39,413   thirdparty/voro++/iter_2d.hh:248:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,414     248 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::pointer pointer;
2023-10-19T16:58:39,414         |                               ^~~~~~~~
2023-10-19T16:58:39,415   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,416     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,417         |                                  ^~~~~~~~
2023-10-19T16:58:39,417   thirdparty/voro++/iter_2d.hh:249:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,418     249 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::reference reference;
2023-10-19T16:58:39,419         |                               ^~~~~~~~
2023-10-19T16:58:39,419   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,420     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,421         |                                  ^~~~~~~~
2023-10-19T16:58:39,421   thirdparty/voro++/iter_2d.hh:250:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,422     250 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::difference_type difference_type;
2023-10-19T16:58:39,423         |                               ^~~~~~~~
2023-10-19T16:58:39,423   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,424     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,425         |                                  ^~~~~~~~
2023-10-19T16:58:39,426   In file included from thirdparty/voro++/voro++.hh:338:
2023-10-19T16:58:39,427   thirdparty/voro++/iter_3d.hh:17:49: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,427      17 | class container_base_3d::iterator : public std::iterator<std::random_access_iterator_tag,c_info,int> {
2023-10-19T16:58:39,428         |                                                 ^~~~~~~~
2023-10-19T16:58:39,429   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,429     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,430         |                                  ^~~~~~~~
2023-10-19T16:58:39,430   thirdparty/voro++/iter_3d.hh:22:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,431      22 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::pointer pointer;
2023-10-19T16:58:39,431         |                               ^~~~~~~~
2023-10-19T16:58:39,432   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,432     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,433         |                                  ^~~~~~~~
2023-10-19T16:58:39,433   thirdparty/voro++/iter_3d.hh:23:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,434      23 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::reference reference;
2023-10-19T16:58:39,435         |                               ^~~~~~~~
2023-10-19T16:58:39,435   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,436     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,437         |                                  ^~~~~~~~
2023-10-19T16:58:39,437   thirdparty/voro++/iter_3d.hh:24:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,438      24 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::difference_type difference_type;
2023-10-19T16:58:39,439         |                               ^~~~~~~~
2023-10-19T16:58:39,440   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,440     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,441         |                                  ^~~~~~~~
2023-10-19T16:58:39,442   thirdparty/voro++/iter_3d.hh:159:56: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,443     159 | class container_base_3d::iterator_subset : public std::iterator<std::random_access_iterator_tag,c_info,int> {
2023-10-19T16:58:39,443         |                                                        ^~~~~~~~
2023-10-19T16:58:39,444   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,445     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,445         |                                  ^~~~~~~~
2023-10-19T16:58:39,446   thirdparty/voro++/iter_3d.hh:161:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,447     161 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::pointer pointer;
2023-10-19T16:58:39,448         |                               ^~~~~~~~
2023-10-19T16:58:39,449   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,449     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,450         |                                  ^~~~~~~~
2023-10-19T16:58:39,450   thirdparty/voro++/iter_3d.hh:162:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,451     162 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::reference reference;
2023-10-19T16:58:39,451         |                               ^~~~~~~~
2023-10-19T16:58:39,452   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,452     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,453         |                                  ^~~~~~~~
2023-10-19T16:58:39,453   thirdparty/voro++/iter_3d.hh:163:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,454     163 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::difference_type difference_type;
2023-10-19T16:58:39,454         |                               ^~~~~~~~
2023-10-19T16:58:39,455   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,455     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,456         |                                  ^~~~~~~~
2023-10-19T16:58:39,457   thirdparty/voro++/iter_3d.hh:252:55: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,457     252 | class container_base_3d::iterator_order : public std::iterator<std::random_access_iterator_tag,c_info,int> {
2023-10-19T16:58:39,458         |                                                       ^~~~~~~~
2023-10-19T16:58:39,459   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,459     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,460         |                                  ^~~~~~~~
2023-10-19T16:58:39,461   thirdparty/voro++/iter_3d.hh:254:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,462     254 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::pointer pointer;
2023-10-19T16:58:39,462         |                               ^~~~~~~~
2023-10-19T16:58:39,463   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,464     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,464         |                                  ^~~~~~~~
2023-10-19T16:58:39,465   thirdparty/voro++/iter_3d.hh:255:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,466     255 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::reference reference;
2023-10-19T16:58:39,466         |                               ^~~~~~~~
2023-10-19T16:58:39,467   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,468     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,468         |                                  ^~~~~~~~
2023-10-19T16:58:39,469   thirdparty/voro++/iter_3d.hh:256:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,470     256 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::difference_type difference_type;
2023-10-19T16:58:39,470         |                               ^~~~~~~~
2023-10-19T16:58:39,471   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,471     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,472         |                                  ^~~~~~~~
2023-10-19T16:58:39,472   thirdparty/voro++/iter_3d.hh:365:56: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,473     365 | class container_triclinic_base::iterator : public std::iterator<std::random_access_iterator_tag, c_info, int>
2023-10-19T16:58:39,473         |                                                        ^~~~~~~~
2023-10-19T16:58:39,474   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,474     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,475         |                                  ^~~~~~~~
2023-10-19T16:58:39,475   thirdparty/voro++/iter_3d.hh:378:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,476     378 |         typedef typename std::iterator<std::random_access_iterator_tag, c_info, int>::pointer pointer;
2023-10-19T16:58:39,477         |                               ^~~~~~~~
2023-10-19T16:58:39,477   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,478     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,479         |                                  ^~~~~~~~
2023-10-19T16:58:39,479   thirdparty/voro++/iter_3d.hh:379:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,480     379 |         typedef typename std::iterator<std::random_access_iterator_tag, c_info, int>::reference reference;
2023-10-19T16:58:39,481         |                               ^~~~~~~~
2023-10-19T16:58:39,482   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,482     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,483         |                                  ^~~~~~~~
2023-10-19T16:58:39,484   thirdparty/voro++/iter_3d.hh:380:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,485     380 |         typedef typename std::iterator<std::random_access_iterator_tag, c_info, int>::difference_type difference_type;
2023-10-19T16:58:39,485         |                               ^~~~~~~~
2023-10-19T16:58:39,486   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,487     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,487         |                                  ^~~~~~~~
2023-10-19T16:58:39,488   thirdparty/voro++/iter_3d.hh:450:62: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,489     450 | class container_triclinic_base::iterator_order : public std::iterator<std::random_access_iterator_tag, c_info, int>
2023-10-19T16:58:39,489         |                                                              ^~~~~~~~
2023-10-19T16:58:39,490   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,490     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,491         |                                  ^~~~~~~~
2023-10-19T16:58:39,492   thirdparty/voro++/iter_3d.hh:458:27: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,492     458 |     typedef typename std::iterator<std::random_access_iterator_tag, c_info, int>::pointer pointer;
2023-10-19T16:58:39,493         |                           ^~~~~~~~
2023-10-19T16:58:39,493   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,494     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,494         |                                  ^~~~~~~~
2023-10-19T16:58:39,495   thirdparty/voro++/iter_3d.hh:459:27: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,495     459 |     typedef typename std::iterator<std::random_access_iterator_tag, c_info, int>::reference reference;
2023-10-19T16:58:39,496         |                           ^~~~~~~~
2023-10-19T16:58:39,497   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,497     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,498         |                                  ^~~~~~~~
2023-10-19T16:58:39,498   thirdparty/voro++/iter_3d.hh:460:27: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:58:39,499     460 |     typedef typename std::iterator<std::random_access_iterator_tag, c_info, int>::difference_type difference_type;
2023-10-19T16:58:39,499         |                           ^~~~~~~~
2023-10-19T16:58:39,500   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:58:39,501     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:58:39,501         |                                  ^~~~~~~~
2023-10-19T16:58:44,096   mdapy/voronoi/_voro.cpp: In function ‘std::tuple<std::vector<std::vector<std::vector<int, std::allocator<int> >, std::allocator<std::vector<int, std::allocator<int> > > >, std::allocator<std::vector<std::vector<int, std::allocator<int> >, std::allocator<std::vector<int, std::allocator<int> > > > > >, std::vector<std::vector<std::vector<double, std::allocator<double> >, std::allocator<std::vector<double, std::allocator<double> > > >, std::allocator<std::vector<std::vector<double, std::allocator<double> >, std::allocator<std::vector<double, std::allocator<double> > > > > >, std::vector<double, std::allocator<double> >, std::vector<double, std::allocator<double> >, std::vector<std::vector<double, std::allocator<double> >, std::allocator<std::vector<double, std::allocator<double> > > > > get_cell_info(pybind11::array, pybind11::array, pybind11::array, int)’:
2023-10-19T16:58:44,097   mdapy/voronoi/_voro.cpp:112:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-19T16:58:44,098     112 |                     while (j < face_index_vector.size())
2023-10-19T16:58:44,098         |                            ~~^~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-19T16:59:00,363   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/voro++ -I/tmp/pip-build-env-qmlv6s3d/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/voro++/voro++.cc -o build/temp.linux-armv7l-cpython-311/thirdparty/voro++/voro++.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp
2023-10-19T16:59:01,526   In file included from thirdparty/voro++/container_2d.cc:10,
2023-10-19T16:59:01,526                    from thirdparty/voro++/voro++.cc:10:
2023-10-19T16:59:01,527   thirdparty/voro++/iter_2d.hh:16:49: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,528      16 | class container_base_2d::iterator : public std::iterator<std::random_access_iterator_tag,c_info,int> {
2023-10-19T16:59:01,529         |                                                 ^~~~~~~~
2023-10-19T16:59:01,529   In file included from /usr/include/c++/12/bits/stl_algobase.h:65,
2023-10-19T16:59:01,530                    from /usr/include/c++/12/vector:60,
2023-10-19T16:59:01,530                    from thirdparty/voro++/cell_2d.hh:11,
2023-10-19T16:59:01,531                    from thirdparty/voro++/cell_2d.cc:7,
2023-10-19T16:59:01,532                    from thirdparty/voro++/voro++.cc:7:
2023-10-19T16:59:01,532   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,533     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,533         |                                  ^~~~~~~~
2023-10-19T16:59:01,534   thirdparty/voro++/iter_2d.hh:21:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,534      21 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::pointer pointer;
2023-10-19T16:59:01,535         |                               ^~~~~~~~
2023-10-19T16:59:01,535   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,536     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,537         |                                  ^~~~~~~~
2023-10-19T16:59:01,537   thirdparty/voro++/iter_2d.hh:22:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,538      22 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::reference reference;
2023-10-19T16:59:01,539         |                               ^~~~~~~~
2023-10-19T16:59:01,539   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,540     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,541         |                                  ^~~~~~~~
2023-10-19T16:59:01,541   thirdparty/voro++/iter_2d.hh:23:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,542      23 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::difference_type difference_type;
2023-10-19T16:59:01,543         |                               ^~~~~~~~
2023-10-19T16:59:01,543   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,544     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,545         |                                  ^~~~~~~~
2023-10-19T16:59:01,545   thirdparty/voro++/iter_2d.hh:153:56: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,546     153 | class container_base_2d::iterator_subset : public std::iterator<std::random_access_iterator_tag,c_info,int> {
2023-10-19T16:59:01,547         |                                                        ^~~~~~~~
2023-10-19T16:59:01,547   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,548     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,549         |                                  ^~~~~~~~
2023-10-19T16:59:01,549   thirdparty/voro++/iter_2d.hh:155:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,550     155 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::pointer pointer;
2023-10-19T16:59:01,551         |                               ^~~~~~~~
2023-10-19T16:59:01,552   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,552     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,553         |                                  ^~~~~~~~
2023-10-19T16:59:01,553   thirdparty/voro++/iter_2d.hh:156:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,554     156 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::reference reference;
2023-10-19T16:59:01,554         |                               ^~~~~~~~
2023-10-19T16:59:01,555   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,555     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,556         |                                  ^~~~~~~~
2023-10-19T16:59:01,557   thirdparty/voro++/iter_2d.hh:157:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,557     157 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::difference_type difference_type;
2023-10-19T16:59:01,558         |                               ^~~~~~~~
2023-10-19T16:59:01,558   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,559     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,559         |                                  ^~~~~~~~
2023-10-19T16:59:01,560   thirdparty/voro++/iter_2d.hh:246:55: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,561     246 | class container_base_2d::iterator_order : public std::iterator<std::random_access_iterator_tag,c_info,int> {
2023-10-19T16:59:01,562         |                                                       ^~~~~~~~
2023-10-19T16:59:01,562   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,563     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,564         |                                  ^~~~~~~~
2023-10-19T16:59:01,565   thirdparty/voro++/iter_2d.hh:248:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,565     248 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::pointer pointer;
2023-10-19T16:59:01,566         |                               ^~~~~~~~
2023-10-19T16:59:01,567   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,567     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,568         |                                  ^~~~~~~~
2023-10-19T16:59:01,569   thirdparty/voro++/iter_2d.hh:249:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,569     249 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::reference reference;
2023-10-19T16:59:01,570         |                               ^~~~~~~~
2023-10-19T16:59:01,571   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,572     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,572         |                                  ^~~~~~~~
2023-10-19T16:59:01,573   thirdparty/voro++/iter_2d.hh:250:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,574     250 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::difference_type difference_type;
2023-10-19T16:59:01,575         |                               ^~~~~~~~
2023-10-19T16:59:01,575   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,576     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,577         |                                  ^~~~~~~~
2023-10-19T16:59:01,665   In file included from thirdparty/voro++/container_3d.cc:10,
2023-10-19T16:59:01,666                    from thirdparty/voro++/voro++.cc:11:
2023-10-19T16:59:01,667   thirdparty/voro++/iter_3d.hh:17:49: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,667      17 | class container_base_3d::iterator : public std::iterator<std::random_access_iterator_tag,c_info,int> {
2023-10-19T16:59:01,668         |                                                 ^~~~~~~~
2023-10-19T16:59:01,669   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,669     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,670         |                                  ^~~~~~~~
2023-10-19T16:59:01,670   thirdparty/voro++/iter_3d.hh:22:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,671      22 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::pointer pointer;
2023-10-19T16:59:01,672         |                               ^~~~~~~~
2023-10-19T16:59:01,672   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,673     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,674         |                                  ^~~~~~~~
2023-10-19T16:59:01,674   thirdparty/voro++/iter_3d.hh:23:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,675      23 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::reference reference;
2023-10-19T16:59:01,676         |                               ^~~~~~~~
2023-10-19T16:59:01,677   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,677     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,678         |                                  ^~~~~~~~
2023-10-19T16:59:01,679   thirdparty/voro++/iter_3d.hh:24:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,680      24 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::difference_type difference_type;
2023-10-19T16:59:01,680         |                               ^~~~~~~~
2023-10-19T16:59:01,681   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,681     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,682         |                                  ^~~~~~~~
2023-10-19T16:59:01,683   thirdparty/voro++/iter_3d.hh:159:56: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,683     159 | class container_base_3d::iterator_subset : public std::iterator<std::random_access_iterator_tag,c_info,int> {
2023-10-19T16:59:01,684         |                                                        ^~~~~~~~
2023-10-19T16:59:01,685   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,686     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,687         |                                  ^~~~~~~~
2023-10-19T16:59:01,687   thirdparty/voro++/iter_3d.hh:161:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,688     161 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::pointer pointer;
2023-10-19T16:59:01,688         |                               ^~~~~~~~
2023-10-19T16:59:01,689   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,689     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,690         |                                  ^~~~~~~~
2023-10-19T16:59:01,690   thirdparty/voro++/iter_3d.hh:162:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,691     162 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::reference reference;
2023-10-19T16:59:01,692         |                               ^~~~~~~~
2023-10-19T16:59:01,692   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,693     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,693         |                                  ^~~~~~~~
2023-10-19T16:59:01,694   thirdparty/voro++/iter_3d.hh:163:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,695     163 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::difference_type difference_type;
2023-10-19T16:59:01,695         |                               ^~~~~~~~
2023-10-19T16:59:01,696   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,697     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,698         |                                  ^~~~~~~~
2023-10-19T16:59:01,698   thirdparty/voro++/iter_3d.hh:252:55: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,699     252 | class container_base_3d::iterator_order : public std::iterator<std::random_access_iterator_tag,c_info,int> {
2023-10-19T16:59:01,700         |                                                       ^~~~~~~~
2023-10-19T16:59:01,701   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,701     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,702         |                                  ^~~~~~~~
2023-10-19T16:59:01,703   thirdparty/voro++/iter_3d.hh:254:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,703     254 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::pointer pointer;
2023-10-19T16:59:01,704         |                               ^~~~~~~~
2023-10-19T16:59:01,705   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,705     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,706         |                                  ^~~~~~~~
2023-10-19T16:59:01,707   thirdparty/voro++/iter_3d.hh:255:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,708     255 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::reference reference;
2023-10-19T16:59:01,708         |                               ^~~~~~~~
2023-10-19T16:59:01,709   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,710     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,710         |                                  ^~~~~~~~
2023-10-19T16:59:01,711   thirdparty/voro++/iter_3d.hh:256:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,711     256 |         typedef typename std::iterator<std::random_access_iterator_tag,c_info,int>::difference_type difference_type;
2023-10-19T16:59:01,712         |                               ^~~~~~~~
2023-10-19T16:59:01,713   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,713     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,714         |                                  ^~~~~~~~
2023-10-19T16:59:01,714   thirdparty/voro++/iter_3d.hh:365:56: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,715     365 | class container_triclinic_base::iterator : public std::iterator<std::random_access_iterator_tag, c_info, int>
2023-10-19T16:59:01,716         |                                                        ^~~~~~~~
2023-10-19T16:59:01,717   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,717     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,718         |                                  ^~~~~~~~
2023-10-19T16:59:01,719   thirdparty/voro++/iter_3d.hh:378:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,719     378 |         typedef typename std::iterator<std::random_access_iterator_tag, c_info, int>::pointer pointer;
2023-10-19T16:59:01,720         |                               ^~~~~~~~
2023-10-19T16:59:01,721   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,722     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,722         |                                  ^~~~~~~~
2023-10-19T16:59:01,723   thirdparty/voro++/iter_3d.hh:379:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,724     379 |         typedef typename std::iterator<std::random_access_iterator_tag, c_info, int>::reference reference;
2023-10-19T16:59:01,725         |                               ^~~~~~~~
2023-10-19T16:59:01,725   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,726     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,726         |                                  ^~~~~~~~
2023-10-19T16:59:01,727   thirdparty/voro++/iter_3d.hh:380:31: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,728     380 |         typedef typename std::iterator<std::random_access_iterator_tag, c_info, int>::difference_type difference_type;
2023-10-19T16:59:01,729         |                               ^~~~~~~~
2023-10-19T16:59:01,729   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,730     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,731         |                                  ^~~~~~~~
2023-10-19T16:59:01,732   thirdparty/voro++/iter_3d.hh:450:62: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,733     450 | class container_triclinic_base::iterator_order : public std::iterator<std::random_access_iterator_tag, c_info, int>
2023-10-19T16:59:01,733         |                                                              ^~~~~~~~
2023-10-19T16:59:01,734   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,734     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,735         |                                  ^~~~~~~~
2023-10-19T16:59:01,735   thirdparty/voro++/iter_3d.hh:458:27: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,736     458 |     typedef typename std::iterator<std::random_access_iterator_tag, c_info, int>::pointer pointer;
2023-10-19T16:59:01,737         |                           ^~~~~~~~
2023-10-19T16:59:01,737   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,738     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,738         |                                  ^~~~~~~~
2023-10-19T16:59:01,739   thirdparty/voro++/iter_3d.hh:459:27: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,739     459 |     typedef typename std::iterator<std::random_access_iterator_tag, c_info, int>::reference reference;
2023-10-19T16:59:01,740         |                           ^~~~~~~~
2023-10-19T16:59:01,740   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,741     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,742         |                                  ^~~~~~~~
2023-10-19T16:59:01,742   thirdparty/voro++/iter_3d.hh:460:27: warning: ‘template<class _Category, class _Tp, class _Distance, class _Pointer, class _Reference> struct std::iterator’ is deprecated [-Wdeprecated-declarations]
2023-10-19T16:59:01,743     460 |     typedef typename std::iterator<std::random_access_iterator_tag, c_info, int>::difference_type difference_type;
2023-10-19T16:59:01,744         |                           ^~~~~~~~
2023-10-19T16:59:01,744   /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here
2023-10-19T16:59:01,745     127 |     struct _GLIBCXX17_DEPRECATED iterator
2023-10-19T16:59:01,746         |                                  ^~~~~~~~
2023-10-19T16:59:28,671   In file included from /usr/include/c++/12/vector:70:
2023-10-19T16:59:28,672   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]’:
2023-10-19T16:59:28,673   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2023-10-19T16:59:28,673     439 |       vector<_Tp, _Alloc>::
2023-10-19T16:59:28,674         |       ^~~~~~~~~~~~~~~~~~~
2023-10-19T16:59:39,749   In file included from /usr/include/c++/12/vector:64:
2023-10-19T16:59:39,749   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2023-10-19T16:59:39,750       inlined from ‘void voro::unitcell::images(std::vector<int>&, std::vector<double>&)’ at thirdparty/voro++/unitcell.cc:147:25:
2023-10-19T16:59:39,750   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2023-10-19T16:59:39,751    1287 |           _M_realloc_insert(end(), __x);
2023-10-19T16:59:39,752         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-10-19T16:59:40,211   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/mdapy/voronoi/_voro.o build/temp.linux-armv7l-cpython-311/thirdparty/voro++/voro++.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/_voronoi_analysis.cpython-311-arm-linux-gnueabihf.so -fopenmp
2023-10-19T16:59:40,527   building '_ptm' extension
2023-10-19T16:59:40,528   creating build/temp.linux-armv7l-cpython-311/mdapy/ptm
2023-10-19T16:59:40,529   creating build/temp.linux-armv7l-cpython-311/thirdparty/ptm
2023-10-19T16:59:40,530   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-qmlv6s3d/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c mdapy/ptm/_ptm.cpp -o build/temp.linux-armv7l-cpython-311/mdapy/ptm/_ptm.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp
2023-10-19T16:59:46,440   mdapy/ptm/_ptm.cpp: In function ‘void get_ptm(char*, double_py, int_py, pybind11::array_t<double>, pybind11::array_t<int>, pybind11::array_t<double>, double, pybind11::array)’:
2023-10-19T16:59:46,440   mdapy/ptm/_ptm.cpp:102:14: warning: variable ‘found’ set but not used [-Wunused-but-set-variable]
2023-10-19T16:59:46,441     102 |         bool found = false;
2023-10-19T16:59:46,442         |              ^~~~~
2023-10-19T17:00:00,602   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-qmlv6s3d/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_alloy_types.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_alloy_types.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp
2023-10-19T17:00:01,819   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-qmlv6s3d/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_canonical_coloured.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_canonical_coloured.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp
2023-10-19T17:00:02,468   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-qmlv6s3d/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_constants.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_constants.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp
2023-10-19T17:00:02,556   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-qmlv6s3d/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_convex_hull_incremental.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_convex_hull_incremental.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp
2023-10-19T17:00:03,664   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-qmlv6s3d/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_deformation_gradient.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_deformation_gradient.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp
2023-10-19T17:00:04,510   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-qmlv6s3d/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_graph_data.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_graph_data.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp
2023-10-19T17:00:04,816   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-qmlv6s3d/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_graph_tools.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_graph_tools.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp
2023-10-19T17:00:05,301   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-qmlv6s3d/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_index.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_index.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp
2023-10-19T17:00:06,462   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-qmlv6s3d/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_initialize_data.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_initialize_data.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp
2023-10-19T17:00:07,198   thirdparty/ptm/ptm_initialize_data.cpp: In function ‘int initialize_graphs(const ptm::refdata_t*, int8_t*)’:
2023-10-19T17:00:07,199   thirdparty/ptm/ptm_initialize_data.cpp:34:21: warning: unused variable ‘_max_degree’ [-Wunused-variable]
2023-10-19T17:00:07,199      34 |                 int _max_degree = ptm::graph_degree(s->num_facets, s->graphs[i].facets, s->num_nbrs, degree);
2023-10-19T17:00:07,200         |                     ^~~~~~~~~~~
2023-10-19T17:00:07,423   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-qmlv6s3d/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_neighbour_ordering.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_neighbour_ordering.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp
2023-10-19T17:00:09,982   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-qmlv6s3d/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_normalize_vertices.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_normalize_vertices.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp
2023-10-19T17:00:10,732   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-qmlv6s3d/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_polar.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_polar.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp
2023-10-19T17:00:11,877   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-qmlv6s3d/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_quat.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_quat.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp
2023-10-19T17:00:12,940   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-qmlv6s3d/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_structure_matcher.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_structure_matcher.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp
2023-10-19T17:00:14,271   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-qmlv6s3d/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_voronoi_cell.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_voronoi_cell.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp
2023-10-19T17:00:18,482   In file included from /usr/include/c++/12/vector:70,
2023-10-19T17:00:18,483                    from thirdparty/ptm/ptm_voronoi_cell.h:59,
2023-10-19T17:00:18,484                    from thirdparty/ptm/ptm_voronoi_cell.cpp:59:
2023-10-19T17:00:18,484   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’:
2023-10-19T17:00:18,485   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2023-10-19T17:00:18,485     439 |       vector<_Tp, _Alloc>::
2023-10-19T17:00:18,486         |       ^~~~~~~~~~~~~~~~~~~
2023-10-19T17:00:18,549   In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
2023-10-19T17:00:18,550       inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21,
2023-10-19T17:00:18,550       inlined from ‘void ptm_voro::voronoicell_base::face_areas(std::vector<double>&)’ at thirdparty/ptm/ptm_voronoi_cell.cpp:1251:36:
2023-10-19T17:00:18,551   /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2023-10-19T17:00:18,552     123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2023-10-19T17:00:18,552         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-19T17:00:18,764   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/mdapy/ptm/_ptm.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_alloy_types.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_canonical_coloured.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_constants.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_convex_hull_incremental.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_deformation_gradient.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_graph_data.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_graph_tools.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_index.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_initialize_data.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_neighbour_ordering.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_normalize_vertices.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_polar.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_quat.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_structure_matcher.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_voronoi_cell.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/_ptm.cpython-311-arm-linux-gnueabihf.so -fopenmp
2023-10-19T17:00:19,059   building '_rdf' extension
2023-10-19T17:00:19,060   creating build/temp.linux-armv7l-cpython-311/mdapy/rdf
2023-10-19T17:00:19,061   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-qmlv6s3d/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c mdapy/rdf/_rdf.cpp -o build/temp.linux-armv7l-cpython-311/mdapy/rdf/_rdf.o -std=c++17 -fvisibility=hidden -g0
2023-10-19T17:00:37,590   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/mdapy/rdf/_rdf.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/_rdf.cpython-311-arm-linux-gnueabihf.so
2023-10-19T17:00:37,834   building '_neigh' extension
2023-10-19T17:00:37,835   creating build/temp.linux-armv7l-cpython-311/mdapy/neigh
2023-10-19T17:00:37,836   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-qmlv6s3d/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c mdapy/neigh/_neigh.cpp -o build/temp.linux-armv7l-cpython-311/mdapy/neigh/_neigh.o -std=c++17 -fvisibility=hidden -g0
2023-10-19T17:00:56,565   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/mdapy/neigh/_neigh.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/_neigh.cpython-311-arm-linux-gnueabihf.so
2023-10-19T17:00:56,826   installing to build/bdist.linux-armv7l/wheel
2023-10-19T17:00:56,827   running install
2023-10-19T17:00:56,851   running install_lib
2023-10-19T17:00:56,859   creating build/bdist.linux-armv7l
2023-10-19T17:00:56,860   creating build/bdist.linux-armv7l/wheel
2023-10-19T17:00:56,861   copying build/lib.linux-armv7l-cpython-311/_rdf.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel
2023-10-19T17:00:56,866   copying build/lib.linux-armv7l-cpython-311/_neigh.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel
2023-10-19T17:00:56,870   copying build/lib.linux-armv7l-cpython-311/_ptm.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel
2023-10-19T17:00:56,877   creating build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,879   copying build/lib.linux-armv7l-cpython-311/mdapy/entropy.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,881   copying build/lib.linux-armv7l-cpython-311/mdapy/temperature.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,884   copying build/lib.linux-armv7l-cpython-311/mdapy/replicate.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,886   copying build/lib.linux-armv7l-cpython-311/mdapy/lindemann_parameter.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,889   copying build/lib.linux-armv7l-cpython-311/mdapy/void_distribution.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,891   copying build/lib.linux-armv7l-cpython-311/mdapy/eam_average.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,894   copying build/lib.linux-armv7l-cpython-311/mdapy/polyhedral_template_matching.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,897   copying build/lib.linux-armv7l-cpython-311/mdapy/tool_function.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,899   copying build/lib.linux-armv7l-cpython-311/mdapy/plotset.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,901   copying build/lib.linux-armv7l-cpython-311/mdapy/timer.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,903   copying build/lib.linux-armv7l-cpython-311/mdapy/__init__.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,906   copying build/lib.linux-armv7l-cpython-311/mdapy/warren_cowley_parameter.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,909   copying build/lib.linux-armv7l-cpython-311/mdapy/potential.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,911   copying build/lib.linux-armv7l-cpython-311/mdapy/lattice_maker.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,914   copying build/lib.linux-armv7l-cpython-311/mdapy/centro_symmetry_parameter.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,916   copying build/lib.linux-armv7l-cpython-311/mdapy/pigz.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,919   copying build/lib.linux-armv7l-cpython-311/mdapy/neighbor.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,921   copying build/lib.linux-armv7l-cpython-311/mdapy/nearest_neighbor.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,925   copying build/lib.linux-armv7l-cpython-311/mdapy/load_save_data.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,927   copying build/lib.linux-armv7l-cpython-311/mdapy/cluser_analysis.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,930   copying build/lib.linux-armv7l-cpython-311/mdapy/ackland_jones_analysis.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,933   copying build/lib.linux-armv7l-cpython-311/mdapy/identify_SFs_TBs.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,935   copying build/lib.linux-armv7l-cpython-311/mdapy/common_neighbor_analysis.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,938   copying build/lib.linux-armv7l-cpython-311/mdapy/spatial_binning.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,941   copying build/lib.linux-armv7l-cpython-311/mdapy/common_neighbor_parameter.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,944   copying build/lib.linux-armv7l-cpython-311/mdapy/steinhardt_bond_orientation.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,947   copying build/lib.linux-armv7l-cpython-311/mdapy/calculator.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,950   copying build/lib.linux-armv7l-cpython-311/mdapy/eam_generate.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,953   copying build/lib.linux-armv7l-cpython-311/mdapy/voronoi_analysis.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,956   copying build/lib.linux-armv7l-cpython-311/mdapy/pair_distribution.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,958   copying build/lib.linux-armv7l-cpython-311/mdapy/system.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,962   copying build/lib.linux-armv7l-cpython-311/mdapy/mean_squared_displacement.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,965   copying build/lib.linux-armv7l-cpython-311/mdapy/create_polycrystalline.py -> build/bdist.linux-armv7l/wheel/mdapy
2023-10-19T17:00:56,968   copying build/lib.linux-armv7l-cpython-311/_cluster_analysis.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel
2023-10-19T17:00:56,973   copying build/lib.linux-armv7l-cpython-311/_voronoi_analysis.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel
2023-10-19T17:00:56,986   running install_egg_info
2023-10-19T17:00:56,998   running egg_info
2023-10-19T17:00:57,002   writing mdapy.egg-info/PKG-INFO
2023-10-19T17:00:57,005   writing dependency_links to mdapy.egg-info/dependency_links.txt
2023-10-19T17:00:57,006   writing requirements to mdapy.egg-info/requires.txt
2023-10-19T17:00:57,007   writing top-level names to mdapy.egg-info/top_level.txt
2023-10-19T17:00:57,024   reading manifest file 'mdapy.egg-info/SOURCES.txt'
2023-10-19T17:00:57,046   adding license file 'LICENSE'
2023-10-19T17:00:57,053   writing manifest file 'mdapy.egg-info/SOURCES.txt'
2023-10-19T17:00:57,055   Copying mdapy.egg-info to build/bdist.linux-armv7l/wheel/mdapy-0.9.3-py3.11.egg-info
2023-10-19T17:00:57,067   running install_scripts
2023-10-19T17:00:57,115   creating build/bdist.linux-armv7l/wheel/mdapy-0.9.3.dist-info/WHEEL
2023-10-19T17:00:57,117   creating '/tmp/pip-wheel-es83ft88/.tmp-k0grpxcm/mdapy-0.9.3-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-10-19T17:00:57,144   adding '_cluster_analysis.cpython-311-arm-linux-gnueabihf.so'
2023-10-19T17:00:57,175   adding '_neigh.cpython-311-arm-linux-gnueabihf.so'
2023-10-19T17:00:57,254   adding '_ptm.cpython-311-arm-linux-gnueabihf.so'
2023-10-19T17:00:57,289   adding '_rdf.cpython-311-arm-linux-gnueabihf.so'
2023-10-19T17:00:57,394   adding '_voronoi_analysis.cpython-311-arm-linux-gnueabihf.so'
2023-10-19T17:00:57,401   adding 'mdapy/__init__.py'
2023-10-19T17:00:57,403   adding 'mdapy/ackland_jones_analysis.py'
2023-10-19T17:00:57,405   adding 'mdapy/calculator.py'
2023-10-19T17:00:57,407   adding 'mdapy/centro_symmetry_parameter.py'
2023-10-19T17:00:57,408   adding 'mdapy/cluser_analysis.py'
2023-10-19T17:00:57,410   adding 'mdapy/common_neighbor_analysis.py'
2023-10-19T17:00:57,412   adding 'mdapy/common_neighbor_parameter.py'
2023-10-19T17:00:57,415   adding 'mdapy/create_polycrystalline.py'
2023-10-19T17:00:57,417   adding 'mdapy/eam_average.py'
2023-10-19T17:00:57,419   adding 'mdapy/eam_generate.py'
2023-10-19T17:00:57,421   adding 'mdapy/entropy.py'
2023-10-19T17:00:57,423   adding 'mdapy/identify_SFs_TBs.py'
2023-10-19T17:00:57,425   adding 'mdapy/lattice_maker.py'
2023-10-19T17:00:57,427   adding 'mdapy/lindemann_parameter.py'
2023-10-19T17:00:57,429   adding 'mdapy/load_save_data.py'
2023-10-19T17:00:57,430   adding 'mdapy/mean_squared_displacement.py'
2023-10-19T17:00:57,433   adding 'mdapy/nearest_neighbor.py'
2023-10-19T17:00:57,435   adding 'mdapy/neighbor.py'
2023-10-19T17:00:57,437   adding 'mdapy/pair_distribution.py'
2023-10-19T17:00:57,439   adding 'mdapy/pigz.py'
2023-10-19T17:00:57,440   adding 'mdapy/plotset.py'
2023-10-19T17:00:57,442   adding 'mdapy/polyhedral_template_matching.py'
2023-10-19T17:00:57,444   adding 'mdapy/potential.py'
2023-10-19T17:00:57,445   adding 'mdapy/replicate.py'
2023-10-19T17:00:57,447   adding 'mdapy/spatial_binning.py'
2023-10-19T17:00:57,451   adding 'mdapy/steinhardt_bond_orientation.py'
2023-10-19T17:00:57,458   adding 'mdapy/system.py'
2023-10-19T17:00:57,460   adding 'mdapy/temperature.py'
2023-10-19T17:00:57,462   adding 'mdapy/timer.py'
2023-10-19T17:00:57,463   adding 'mdapy/tool_function.py'
2023-10-19T17:00:57,465   adding 'mdapy/void_distribution.py'
2023-10-19T17:00:57,467   adding 'mdapy/voronoi_analysis.py'
2023-10-19T17:00:57,468   adding 'mdapy/warren_cowley_parameter.py'
2023-10-19T17:00:57,471   adding 'mdapy-0.9.3.dist-info/LICENSE'
2023-10-19T17:00:57,472   adding 'mdapy-0.9.3.dist-info/METADATA'
2023-10-19T17:00:57,474   adding 'mdapy-0.9.3.dist-info/WHEEL'
2023-10-19T17:00:57,474   adding 'mdapy-0.9.3.dist-info/top_level.txt'
2023-10-19T17:00:57,476   adding 'mdapy-0.9.3.dist-info/RECORD'
2023-10-19T17:00:57,485   removing build/bdist.linux-armv7l/wheel
2023-10-19T17:00:57,587   Building wheel for mdapy (pyproject.toml): finished with status 'done'
2023-10-19T17:00:57,606   Created wheel for mdapy: filename=mdapy-0.9.3-cp311-cp311-linux_armv7l.whl size=627598 sha256=8cb78787290c397b9dfece2e2dea33932dbd7f8bfc25102ffb19d3cfc3e8a21b
2023-10-19T17:00:57,607   Stored in directory: /tmp/pip-ephem-wheel-cache-krd_95l9/wheels/f6/ea/b1/c387f66d08aec0adddc27f16e70b96293d8f3875700d1fde72
2023-10-19T17:00:57,621 Successfully built mdapy
2023-10-19T17:00:57,641 Removed build tracker: '/tmp/pip-build-tracker-39xj0nju'