2023-10-22T14:17:25,961 Created temporary directory: /tmp/pip-build-tracker-picegkmz
2023-10-22T14:17:25,965 Initialized build tracking at /tmp/pip-build-tracker-picegkmz
2023-10-22T14:17:25,965 Created build tracker: /tmp/pip-build-tracker-picegkmz
2023-10-22T14:17:25,965 Entered build tracker: /tmp/pip-build-tracker-picegkmz
2023-10-22T14:17:25,967 Created temporary directory: /tmp/pip-wheel-1us7h8ol
2023-10-22T14:17:25,977 Created temporary directory: /tmp/pip-ephem-wheel-cache-jr56qi8p
2023-10-22T14:17:26,032 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-10-22T14:17:26,046 2 location(s) to search for versions of pyhmmer:
2023-10-22T14:17:26,046 * https://pypi.org/simple/pyhmmer/
2023-10-22T14:17:26,046 * https://www.piwheels.org/simple/pyhmmer/
2023-10-22T14:17:26,047 Fetching project page and analyzing links: https://pypi.org/simple/pyhmmer/
2023-10-22T14:17:26,048 Getting page https://pypi.org/simple/pyhmmer/
2023-10-22T14:17:26,052 Found index url https://pypi.org/simple/
2023-10-22T14:17:26,199 Fetched page https://pypi.org/simple/pyhmmer/ as application/vnd.pypi.simple.v1+json
2023-10-22T14:17:26,594   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/79/24/b9adc93653b83e3aa333588f8fe80cf6a058b97497a1a722e7a2cf5bc5b3/pyhmmer-0.1.0a1-cp35-cp35m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-10-22T14:17:26,595   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/41/5a/594c4415860394f14b94137e10f3b6264fbd452a9ed00371fef870bdd68e/pyhmmer-0.1.0a1-cp35-cp35m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-10-22T14:17:26,595   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2f/fe/4cf2fc8c5eb288fc72cbbc151d6da1b6f6e73fcba66842ed40532069902d/pyhmmer-0.1.0a1-cp36-cp36m-macosx_10_13_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-10-22T14:17:26,596   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/dd/c9/3f46d702c63e188539c28555af361e58ead4bff416799042c5ecf97805cb/pyhmmer-0.1.0a1-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-10-22T14:17:26,597   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/76/12/f5d1ef8114cc5e0ab890d562768e9a6eb253b3e3bf258f8105c1d1841c73/pyhmmer-0.1.0a1-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-10-22T14:17:26,597   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/95/b6/b92f44fcc712bc3dd621eccefe34d569a17f0ae73133f352a47fb2029c44/pyhmmer-0.1.0a1-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-10-22T14:17:26,598   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c1/b6/0ca49ee6803d761eefc93528e9e8106151e06acf77ba9f669275c01863ac/pyhmmer-0.1.0a1-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-10-22T14:17:26,598   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/be/0d/e2e21b3925af6887baf35a3e8993b5fe4863d93638138e7d5f236bcf2197/pyhmmer-0.1.0a1-cp38-cp38-macosx_10_13_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-10-22T14:17:26,599   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/56/3d/aac55b3f74ecd81ff3f619083c277ba40df45d8e6b8fc19d58eb74fab09b/pyhmmer-0.1.0a1-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-10-22T14:17:26,599   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/56/cc/11cb714fad98ed3c1689ce83a31a29d744ed34c822af3ae63b2450e6b159/pyhmmer-0.1.0a1-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-10-22T14:17:26,600   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c5/39/ca6e515c639a28632e52579a75aabe22d6bf2fe2a66cb2bd407fea81a1fe/pyhmmer-0.1.0a1-pp36-pypy3_72-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-10-22T14:17:26,600   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/92/21/bb677b42abb107adf96a8e305659779332f1faece8c3c8b8227d6c447714/pyhmmer-0.1.0a1-pp36-pypy3_72-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-10-22T14:17:26,601   Found link https://files.pythonhosted.org/packages/9d/52/5dfdc7b0b49d72f6975c789255f785fb5adaed4d316dea2c1fd5752e3671/pyhmmer-0.1.0a1.tar.gz (from https://pypi.org/simple/pyhmmer/), version: 0.1.0a1
2023-10-22T14:17:26,601   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/fb/5a/94c8ad40e16bd1b238703a8815bd68d90b0559ac8cbaa7a027d2a886978b/pyhmmer-0.1.0a2-cp35-cp35m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,602   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0d/a8/b31471655d0f09813748c9d8888587e3a1e1573f0c01c748676d03cc3c51/pyhmmer-0.1.0a2-cp35-cp35m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,603   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/da/1f/4b3aef73b2a9d4e07d56700a1a11794e6c92dd9018c1008b53e6c0e903ca/pyhmmer-0.1.0a2-cp36-cp36m-macosx_10_11_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,603   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cf/83/a386d9e2350ec96fe9d0c6d8c274c72afda82745e5586926966b0c8e678f/pyhmmer-0.1.0a2-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,604   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d0/24/aaa2a74692ac30b32f7da206479021eb206ea6e7dbb7023ad8bae97db1a4/pyhmmer-0.1.0a2-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,604   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5a/4a/d1cba5443443544a77b200f47f2ba3ab679ef974bbf51dbfefde401902f0/pyhmmer-0.1.0a2-cp37-cp37m-macosx_10_11_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,605   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d2/bf/a7d9c65a9c2660474ad72338ca47427f6f78e6ad378026edf2fdce3019f2/pyhmmer-0.1.0a2-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,605   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a8/f7/10d886b6e03cdf16a6123dc48687cf1aaa025ac2b17d902bce75d4785ea4/pyhmmer-0.1.0a2-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,606   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0c/54/8b3c37d0732fedc623776c24f703a10b069436039abc2cbbed14eff2d665/pyhmmer-0.1.0a2-cp38-cp38-macosx_10_11_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,606   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ef/4d/86ff1e09e523b7d38d5d88d507f4131d4e20348855bb73603693355baf99/pyhmmer-0.1.0a2-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,607   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/14/d7/a10594b0c3bac79e2526c5659789b38cd98675cf8bc600c7c386482f40ad/pyhmmer-0.1.0a2-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,607   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/92/f8/e76e388294f53736440bf078f3e6d407625ab53077c8da0a80c776aaf5de/pyhmmer-0.1.0a2-pp36-pypy3_72-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,608   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b0/94/945c8e50db0e658ccbda8abb26a0becd29e414bbfc9a2aa0a07329ac86b4/pyhmmer-0.1.0a2-pp36-pypy3_72-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,609   Found link https://files.pythonhosted.org/packages/a9/d8/7d1a3e189d29f5f57cfc2b5706e46d9c593228316d88d9791e4b6deaf818/pyhmmer-0.1.0a2.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5), version: 0.1.0a2
2023-10-22T14:17:26,610   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/67/dd/ffe938b4db1f8230060a11a725500da00678d2431552685541e49f56a1cd/pyhmmer-0.1.0a3-cp35-cp35m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,610   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a9/0e/8634c98e9bb007edb4d9b0504cd2325f0db0303124c2285405f422d48d60/pyhmmer-0.1.0a3-cp35-cp35m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,611   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ac/a6/5d0240be2817e6b3c876493903fdf300a05a4d27ab4ce3e71a86bb4e6e47/pyhmmer-0.1.0a3-cp36-cp36m-macosx_10_11_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,611   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5d/05/76e3a2a9e1a8d8f2cc41a56712b6f44d518d44e697d8cf4dd501540233bb/pyhmmer-0.1.0a3-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,612   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e6/0a/6f7079e3579f2729c0bd8d504f321336e981bb7e6d39cd17ec3077a5fff4/pyhmmer-0.1.0a3-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,612   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/82/43/7dd16f4ba5889baf5948f420bfb0333b10f00b247b7dc346eb1f564951e9/pyhmmer-0.1.0a3-cp37-cp37m-macosx_10_11_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,613   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/42/e3/1ae53fd316b2f4d952c9cc566068781a0e0bd676e741f328ae2c902d1490/pyhmmer-0.1.0a3-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,613   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/14/ee/8fa3f99cb062863c91e73654f21024373cae0187e5e3476275c1cf9d06f5/pyhmmer-0.1.0a3-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,614   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8c/67/4cb6f3ff89e47e060598f940d771799fdd7b1427544cd8da94ce895e9e4f/pyhmmer-0.1.0a3-cp38-cp38-macosx_10_11_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,614   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9a/61/e5f4b60a3ea29110b78672a95dac9bc165727c96732e34868f249e3422e1/pyhmmer-0.1.0a3-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,615   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/37/df/8c9ccb8baeec522b05e956beaf899596ada02a3b383dc7a8d259b69e825b/pyhmmer-0.1.0a3-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,615   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5f/78/7cd9016de0f1aa1ee2da0200224cb886959e62cb97c933553cdc7fd2560f/pyhmmer-0.1.0a3-pp36-pypy3_72-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,616   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8f/2a/abf43d38a2414b719e57bf5c5edb0803179f6d0e6a16fc2eed28cc77b6f5/pyhmmer-0.1.0a3-pp36-pypy3_72-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,617   Found link https://files.pythonhosted.org/packages/54/29/75df6ece9030041c44fff57220bf48950d4c653ddca7e02a54d4d5fc21cc/pyhmmer-0.1.0a3.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5), version: 0.1.0a3
2023-10-22T14:17:26,618   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/59/0b/15f39d875ef0cbadfd3b069916f632409989918429ec2604eec53cd7e448/pyhmmer-0.1.0a4-cp35-cp35m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,618   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/48/3c/336700ba033d737f5e839fd63e3f0aa4946a66870f7d54f3825ac34c1a95/pyhmmer-0.1.0a4-cp35-cp35m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,619   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e2/af/ed96bc98aa7c04aa0c1ecdc7bc2ff90a6fde3d4f323c23509e56a205d93d/pyhmmer-0.1.0a4-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,619   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5d/6e/4829b621577195c923ae8bf3efa95925bcb93478bee8938818043597c926/pyhmmer-0.1.0a4-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,620   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/67/90/3f2cc3b8d0d2400b4cb21655f124b1704f0b71b05a0680f6671b19ec566c/pyhmmer-0.1.0a4-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,620   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c2/da/bc625da5fac25a825470749a1a0465f15cceb4c702cb9efd8b69e76de5e7/pyhmmer-0.1.0a4-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,621   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/4c/35/22c6cb71edfcb82ef9d649d3adb11574f1f1ec930491242295c3916e7572/pyhmmer-0.1.0a4-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,621   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a0/c7/3366cd7f01c8a50a9952c1d876141630de3d6b68d4bd2067b17b121921af/pyhmmer-0.1.0a4-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,622   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/96/ab/547d16b731200d26c3295f6ae6192d6d6115d613dd3787ea0f8978478bde/pyhmmer-0.1.0a4-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,622   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/73/e4/2e4a8bc0edf07188d51fcd3b1ff17cce3efa831f76e6e16b84df1cfd3cde/pyhmmer-0.1.0a4-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,623   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8f/64/14e6ba3b80de2a4bcbfff2f876cc9b04151570d88e91d5a6496052e33072/pyhmmer-0.1.0a4-pp36-pypy3_72-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,623   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1b/9a/288358a8964913e26cc5d10e5e5a4ec01b72a33d1072d8f4c1423d24e643/pyhmmer-0.1.0a4-pp36-pypy3_72-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T14:17:26,624   Found link https://files.pythonhosted.org/packages/b6/28/6bbe80cb3e3fcf41e368bd852dcbd88914534b2bae2722a958b8bd4accfb/pyhmmer-0.1.0a4.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5), version: 0.1.0a4
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2023-10-22T14:17:26,650   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/3e/18/14b6060d8720a8ec994194d192b3a096cdd78143b4ceb2653b3db9f10ff8/pyhmmer-0.1.3-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,691   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/7f/65/3dfc2ab2a1c9ad08048e043be080d6d77c1139bb6d79b787e83217a804e9/pyhmmer-0.3.0-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,691   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/72/56/bd664da15d6eff0e57163598b18bcb66db853fbb80da61d41a74ddba33fb/pyhmmer-0.3.0-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,692   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b4/ab/0d6313332333d9104d39748c1fbdbb312fd3a3cc9f871b4f7bbea4dc5eb8/pyhmmer-0.3.0-pp36-pypy36_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,692   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/59/6f/1bb9034ca6c811c37dcf4eb0f9304e4d575cd4855be7da0c51cad30c117d/pyhmmer-0.3.0-pp36-pypy36_pp73-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,693   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1a/84/801ca5f828500d3825b066c8006d6b501d67d57d43f1c8d95c62fb72ed21/pyhmmer-0.3.0-pp36-pypy36_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,693   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/40/bd/c936e6aaa290135fadb7a240036567ea730c38646692ed5a161094168db7/pyhmmer-0.3.0-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,694   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/91/23/486eb994a82339f2dd5e15f734dfe622c7767d41b77b48dc638cc06192be/pyhmmer-0.3.0-pp37-pypy37_pp73-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,694   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8f/e9/35bc8f987689ae229a69375d849818e3e444970e5c0a506c2ae4a9b67b37/pyhmmer-0.3.0-pp37-pypy37_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,697   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/46/ba/3bcc8eddba05cf995bb5a718f904e08875159d430687c8a65f3cdcf1ea24/pyhmmer-0.3.1-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,697   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ce/5b/b92aa85314f24f4a19f66f18cfa3c6f3807594d7c3a23a8bfb5cfd92c282/pyhmmer-0.3.1-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,698   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5b/ec/8fc61155ad090117ec91574677ffe7be2540b8ac1eda05aac39b04b2baf7/pyhmmer-0.3.1-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,698   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6f/af/d847ec7dced017b36394aa1f1b1322f561b68831d0c82c5ed4198c10b4c6/pyhmmer-0.3.1-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,699   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b6/2f/ed4c88a0ff74bce8781ecc75dd6d34d6d6c4f7dbb6f8fc7538812fb1bcb8/pyhmmer-0.3.1-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,699   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/74/ba/2071d1002491f10b45fe057f8707b7f879546443a18ed0acb9a9486d3033/pyhmmer-0.3.1-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,700   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e3/1c/ac254f0a00b9739d4587df65f030cd15783f57feb996470cd4664e24e8b2/pyhmmer-0.3.1-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,700   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8d/fb/d87f9c26a4b58ea330e7936c4f59f0d8ecfdbc1e76aed60eaf5dd29f04ba/pyhmmer-0.3.1-pp36-pypy36_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,701   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/57/15/82f4a4b0da12cdf0d044b6624cefa7cf563a60666a81196050b9f098df71/pyhmmer-0.3.1-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,701   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f9/c6/3990e6ea23334f641730885bcdd1a2f304a2149d9f4f6f64654de88a4693/pyhmmer-0.3.1-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,702   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e3/8e/9bb0b9dc14993637bf411158a8a74498ab297d9207b27163b88025846d10/pyhmmer-0.3.1-pp37-pypy37_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,704   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0f/05/7fb226eb9c2131dd60bd56f0077e006a4e51da51272d92163b62ca4f8eea/pyhmmer-0.4.0-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,705   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/11/8a/0383377b9fde608c63c61bcde44cb8ea0c43b24c2b719bd2292201e08d6b/pyhmmer-0.4.0-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,706   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e6/4c/1d63e605113d666e52d17d7e73201b3313640577f5bef5207a6bab7b06df/pyhmmer-0.4.0-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,706   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/83/55/929caad4036f3d97abd41694b19b773313afa4fe6bece2619bcd6cf81917/pyhmmer-0.4.0-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,707   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2e/bd/9858bf2ec674d3a6470534bc5146583b7f4667c337fd0c73292d0d1aa6c3/pyhmmer-0.4.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,708   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2b/f6/64fc4c3df308f1d50c90469090967e8d5acfb55a9c4bea7bcbeca33aa95e/pyhmmer-0.4.0-pp36-pypy36_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,708   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9f/f8/5d58d4f3f80c970010aea222b958c3f2e04a970c0573aa675fa805394f5a/pyhmmer-0.4.0-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,715   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/84/f5/5f83239790be66db9ea89781295020172d20ccc6d1262f4064dc2c1170cb/pyhmmer-0.4.1-pp36-pypy36_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,721   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d6/21/3a09a81de850eb81ab720eb05bb1d1362070b1cbbc6a6b7b1edf701920d4/pyhmmer-0.4.2-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,721   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/29/43/19411901fe99dd7038ebb98fabd2b79062b2944bec551d0b06bd9909adc4/pyhmmer-0.4.2-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,722   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/15/c9/ffa040555c4ae3673221436506c8c272c22a53bd9e6a54efe0157d9c2972/pyhmmer-0.4.2-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,722   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cb/06/a2fc008cfdd553285325cf8373f3b6af85bb7cac0e294f45948bf1f282aa/pyhmmer-0.4.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,723   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/05/dc/0ed9ba672cc508bc15b4faf62a6444434e824ded77cfaf60662d90cb9601/pyhmmer-0.4.2-pp36-pypy36_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,723   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9c/5e/212fe49995ccad358150012abf2da8ffbc25f024436b6fdcc89173e95b32/pyhmmer-0.4.2-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,724   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/53/9e/486d5da6d404842d00eabfbb1d7a25ffc0c49503dd7d267f1a6a701840e5/pyhmmer-0.4.2-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,724   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/68/88/b8bb0c20875f4638bb7d600c4c3dc65eb742b3a9833c730aa4915e94aa9a/pyhmmer-0.4.2-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,727   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c9/50/caff34277134400d58687859f224f34e88a6aa7abc6b3371150c3997f7a1/pyhmmer-0.4.3-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,727   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c6/43/726fc37dd0ece9c81780c9e29b90be4493693f4c6e8edde68b3cf8189125/pyhmmer-0.4.3-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,728   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/bf/5f/6a88535a37b4de01584d62e008fb415adbe3f1440950dabba648943aa3c1/pyhmmer-0.4.3-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,728   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b5/6c/ec2ff99e8dc22520805ecf43ff22369a1ca0228cbd6fabfc3de0d7695481/pyhmmer-0.4.3-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,729   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f6/9a/8df126ab5ccf2278e9b3414c26f53bf01b480164abcc11c9d2d56d9f67f4/pyhmmer-0.4.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,729   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2d/63/9e0ac76ca6baae6f288983a7af56de078773b5c0d61004419d1319197f61/pyhmmer-0.4.3-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,729   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c2/30/05d945cce1855035b4bb78996bac7ce0e371e2dc82b186147e36d551e1d0/pyhmmer-0.4.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,730   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/95/94/cacfb35c7ee944e9b9dac2ba8ef20cc192958cdbf1e4e223783152251a7b/pyhmmer-0.4.3-pp36-pypy36_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,730   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ff/ba/e2347228e6bc83d22820f46bf33ed8558ce1128a60128edd2b9bd770078e/pyhmmer-0.4.3-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,731   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c5/9a/d5447b14a91a994bd2ec38a1a4880c29c93bce74e1aa7a328a794901a870/pyhmmer-0.4.3-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,731   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/eb/87/8074c4e8896b87ef161b2490f525315f70c4783e567cfc15679bdab1f059/pyhmmer-0.4.3-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,733   Found link https://files.pythonhosted.org/packages/4f/77/3499166ca2e4ca1b8736bebd9082787c5bb88478c98fe14970e88cdecf07/pyhmmer-0.4.3.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.4.3
2023-10-22T14:17:26,733   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6a/9b/b6aa00ca89a0f7a238d2f23a241416e7051d7ba24fe7505d1ec33c7a21e5/pyhmmer-0.4.4-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,734   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e0/6c/20245a7c295a2eca32fe7db3dec34c0c581c6c2ed0ce926cafe318eb2259/pyhmmer-0.4.4-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,734   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/07/f0/066382b4d9e67ee4df32b0ea99a0d499739b31375505b28d87efbef0d7ce/pyhmmer-0.4.4-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,735   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ba/aa/2be9a4c359b3cde19a49800e85813b5f18f1116c5f7fb828f12f2b3d6102/pyhmmer-0.4.4-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,735   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6e/c7/d1adec561776afaf05b52a9316b4cf7922497052c82042d4c7ec790c7c96/pyhmmer-0.4.4-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,736   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b9/b0/666d105f9f9ab1881952962ae9e84beb7f4537b00deed7fda9b8ec268715/pyhmmer-0.4.4-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,736   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/82/a1/4daf57b4a7e354dfb8ce1a4083926a7383e056d295fad8a1cfbf53a2ad0a/pyhmmer-0.4.4-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,737   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6f/02/c2ac022076a9b264f91a0f7e6b08a89934d5e1435943cb8b39304cdb7447/pyhmmer-0.4.4-pp36-pypy36_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,738   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e9/d1/2c4a7021f650815ccddea11adf8506dba8590d6f1e1a82050766b963fe5e/pyhmmer-0.4.4-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,738   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/91/78/eefaf55976164ad3550c2f76c6e9c732d79b7c68e1abbbfa98646d756a86/pyhmmer-0.4.4-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,739   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e6/08/8f9539ba0d0e00aa7cdd16db85ffd3ee0716b515167d95efe68b11c0f583/pyhmmer-0.4.4-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,741   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/36/11/9211817ba7eb6aa848578017977e3ea4d42a5f2ba76a5a2c0c71d5984d6a/pyhmmer-0.4.5-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,742   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/47/a6/ee5ca7c4a3dcf82cf0f0dd5418c9fddad82149867352332d1feed8528cec/pyhmmer-0.4.5-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,742   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8e/ab/aaf80ebbba238a42a3f37e794ee56fad608ef5c5880dc5701d044d5720fb/pyhmmer-0.4.5-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,743   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8a/3c/c22f961311a96364b2fc84ebcd25ee75ce9111f27c9eaf48c1faeeafe8c7/pyhmmer-0.4.5-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,744   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/db/a3/c5f8dd1e931959d9c38df19fc937c6cf8568174e30ea2c2a86849cbd4b01/pyhmmer-0.4.5-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,746   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8f/9e/c179587a659325aa519390efba2fe7775178a111888fe32ba0978fd91205/pyhmmer-0.4.5-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,749   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/03/d3/691d493cfc4d37f8f099ec52179d86fffaed4c9e3a6b9d76f6a3b5cf0e27/pyhmmer-0.4.6-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,749   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c5/f0/343198b3cebda51800efd71bc6001f5754a69c364da0f5571a5c4e91965d/pyhmmer-0.4.6-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,750   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ed/2e/efbfaaabf781ffd21b425c7cbe4dca8215c22388213aeec10b953c320cc3/pyhmmer-0.4.6-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,750   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6e/bc/1a349bbc9da921811a3c5f385dcb25819223672145a033539eb8acfa762e/pyhmmer-0.4.6-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,751   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8f/b6/432a099063555660c698ddf22c27a9f0e253ea7bf0b357dbcf9deb53f552/pyhmmer-0.4.6-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,751   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/61/57/9941d06a569a34685928406e5b5d47819417a2379a26233437ca53a3484e/pyhmmer-0.4.6-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,752   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/3f/87/171796b7139a8a44ba960344487f474d65bb5f16c21a088bede3d3cdec33/pyhmmer-0.4.6-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,752   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d0/b0/5d0f1b002f50fc531485e8691224de277d329d293bde922a35f4659e73b8/pyhmmer-0.4.6-pp36-pypy36_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,753   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5e/44/cc860850904897b27fcb884a05986159a1ea08e238150aedba27f5c2a8ab/pyhmmer-0.4.6-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,753   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ce/14/ced57dff0f434c8fe2d84ed1f74b33d0dcc8b8dfd3b3a9ae9aa59f3d601f/pyhmmer-0.4.6-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,754   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/41/80/ef4da6ee20a7937f2a3e3c58bf45519a91890feda2461bc18f353ce70fee/pyhmmer-0.4.6-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,755   Found link https://files.pythonhosted.org/packages/bd/5f/6e0db077ed2e1073b9fe7c4b18df5774bb86c2aa27f191713cd3f3aab53c/pyhmmer-0.4.6.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.4.6
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2023-10-22T14:17:26,756   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/fa/f4/eccba2715b5b099cee52cddda59b3e5f8344071045f7c0c4567d3a3e32d7/pyhmmer-0.4.7-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,757   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f6/fc/d9b9efcc7b21381a3fa0c4b83e083c9d0b406868846054b989d105c301c8/pyhmmer-0.4.7-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,757   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d8/6f/d70ebea12581688dbcf180b983186e3d3a8ad2325cc8691c837276bb3e67/pyhmmer-0.4.7-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,758   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/46/35/0c72fb32b8c75526ca61e74b835254a36a377ca9f7d53f33c607f7fb27a6/pyhmmer-0.4.7-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,758   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a0/c1/9f98c0bc9356578c3c4b14fd45a738acae7f7940a8ddc8342a8632734a3f/pyhmmer-0.4.7-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,759   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2e/1a/9605d23785ef8dbed1109f79c3797d2e417bda20e9207a4c8156609c808c/pyhmmer-0.4.7-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,759   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/46/28/1373677589c6dff86a9c29c5340ce8f17fea4163530ad63d8c2a4a54141f/pyhmmer-0.4.7-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,760   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/20/89/62ec67b2d2c1b17a61c6ac8458eb95c31f28da3c69920fece52325ce6a6f/pyhmmer-0.4.7-pp36-pypy36_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,760   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/bd/1e/dedaa65e0af9d9e0e2e3524fed5730187f0241d75ae14a30c537aa0b06fc/pyhmmer-0.4.7-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,761   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ed/45/d5bc13839408fcd2026afeef68619db2ea343d3a9add651214c37fde69b4/pyhmmer-0.4.7-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,761   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d9/04/036c8ea00e8388dba6b116f4914df1065d7856f786d5c6458a1bd1ec6576/pyhmmer-0.4.7-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,764   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5c/35/02845b5af76b67f8a7d0703f049793aba99d5323cc05851c7dfd32e59145/pyhmmer-0.4.8-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,764   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d2/5d/bd3895ebf5d0c21e5576e046cb295b3832174b93cdd7affa2c965eb72002/pyhmmer-0.4.8-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,765   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a9/2f/2ffaf5d537ff04d90b69c779d2e4d060630f29b25fbedb95a76e6a0ca195/pyhmmer-0.4.8-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,765   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/87/e9/d607ccdc5e57e8bfdaf1eec1fe51bd434eb57fe61fb80d60236519ee4162/pyhmmer-0.4.8-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,766   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/29/de/6af96c7b795c643e27fdb6518e64c74b7c1c6cdb7624e15c040bce58f9d6/pyhmmer-0.4.8-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,766   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/62/ec/918058530f70ad9b58ec9dc1638115362f59cfb9f5ad584732fe290b8dbb/pyhmmer-0.4.8-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,767   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5b/42/4a8ec9fdb0e57cddff194646e62360e73f6a57a3d339095df6572af0f935/pyhmmer-0.4.8-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,767   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e6/68/8c577f9574bed3ac3017a76bf487b76b80c784163a9ddf15e14db3a84adc/pyhmmer-0.4.8-pp36-pypy36_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,768   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/40/22/099da301d77a3f512bde56a54fa5272e937818843f8be96aa46089071f4f/pyhmmer-0.4.8-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,771   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0d/7e/b349dc728eb72f78b0ac0b1cc9a7530000740584fcebadda7b93d0f13a0d/pyhmmer-0.4.9-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,779   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/7f/ac/2db59c94139155e1241fabf650a8f30b238a68d13ca40014a75aece65b74/pyhmmer-0.4.10-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,780   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/06/ad/aaeafd77e0037312873a136a3c2165a5eab10ae37f56cb60b8c6de7442b4/pyhmmer-0.4.10-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,780   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/05/87/24601e2b81fedba09b3a003fd1e4fe78c8cd252767663acd9dbc63d1784d/pyhmmer-0.4.10-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,781   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cd/6e/9ab04139587efaeeceefb0a5e10178b14c61abdf67a854fc0430b6c8af80/pyhmmer-0.4.10-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,781   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0d/63/e4a944ac648642739f5dd85127803e47939202e025e0a9ca9fccc100eba1/pyhmmer-0.4.10-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,782   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9d/b8/b5c116cef579c924383e595072bfea9c24a894ef916eaecb139cf3e274dc/pyhmmer-0.4.10-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,782   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/33/90/566f66a4ca8bbba8d364b5d123399c5ca76ea8050d829a397d65eabaf3ed/pyhmmer-0.4.10-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,783   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9d/46/ae84e7ae14e9b3e8026b796471844959fbb6f4043c1af329dee1e9f702c5/pyhmmer-0.4.10-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,783   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f1/6d/ef6e6e92eb4925da759c64c881ff811f5ea4073b826b2466fe08a4ef1698/pyhmmer-0.4.10-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,786   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/4a/fc/4919fc4e0f15c48c060ef04908af7e4576aff4a5aef06a7fe8876496716e/pyhmmer-0.4.11-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,786   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/76/76/0ae3492a40179ac43d453b37b8a3d19bd58c3ca762013eca94aeb9592873/pyhmmer-0.4.11-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,787   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b4/dd/1f02cbf6cda0a82564cab00b63fba1904fc98be1db7c09e8eb2084b322d6/pyhmmer-0.4.11-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,787   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c0/3d/c2ca1d16803049f2917027ff4b05dc7b635757829f9c7288114edd73516a/pyhmmer-0.4.11-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,788   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/62/30/178be3d6c5dffe69cf886beff8302927e15d5ae2b92e9cef7f2f3fd0f43b/pyhmmer-0.4.11-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,788   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/63/9b/dc1fc0f379310382669aad49b6281cf3703f46662fc8d968b0b9ca0d7e8c/pyhmmer-0.4.11-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,789   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5c/54/4cba0bf00660fb32bc4e76006a76b20eaa4f694f49f37994995c6b0a4e1e/pyhmmer-0.4.11-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,789   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f9/71/f2d8518120e117fdb842d13e7714678c40692bf60bce01e54c883625a1f1/pyhmmer-0.4.11-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,790   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a3/91/02307afd6d26f1423cfd8f46dd4b070a7e4c84ad6d00524e5f86f22e5fab/pyhmmer-0.4.11-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,790   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a0/87/c0e6ce633d6649cae526c23260219fb911e2c3da891eb2485a5b6b8e6cb7/pyhmmer-0.4.11-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,791   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/61/d7/a415042ae43b7a13fbcd1a3295a8b8189029e7baeede92ab82ce597db36e/pyhmmer-0.4.11-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,791   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9f/5f/1fd5587437c9e6331fe7a1d85d11d1e7d71fd21e068d1f0800c30bd2d0ec/pyhmmer-0.4.11-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,794   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/97/5a/9983f2ef20d457d0065c12d96103c9ff25581089fc29478f2d387ede8007/pyhmmer-0.5.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,794   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/18/55/361aa005346f7810a9d2daf9a25eb8bc4cc5352bd8ff0cb9e25caee1c3f4/pyhmmer-0.5.0-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,795   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a9/ab/d4ac37a66e6344b641cc4f5bf6a99f55a9a4f1424a63a214a7862086628e/pyhmmer-0.5.0-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,795   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/27/57/1488737434a2bb61340ad3c0fc732fedef52718dca20931ed2617e66bd07/pyhmmer-0.5.0-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,795   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d3/d4/231efd3e3d8130f57875939fa9cb21160b8edc51f1749eb989673c9921b4/pyhmmer-0.5.0-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,796   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/95/1c/5118252d96ee71ccad56ad081fcff29e7af31ea85b9e94b97911df3db5e3/pyhmmer-0.5.0-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,797   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/76/20/0926ec071a4373f167f1c3265c1fe4d2ace1d71e85e6b37bd8a66dd31925/pyhmmer-0.5.0-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,798   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/fb/15/f3b826ba98bfbc9386e628d9b6fa5237a0e761274a1e84a6e1042fa55784/pyhmmer-0.5.0-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,798   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/66/e6/77a0ac512c431181dcb2ea9d41912a09518dd4514689bcf035a31576e479/pyhmmer-0.5.0-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,799   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b7/8e/3030e8640238fe995a33b34bbcf073e3c37859cb8cddab5badde1c9f698d/pyhmmer-0.5.0-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,800   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f7/37/f35d1b12f6758bcee4c013957c23e7719e1db5795f37bf64e4367b9992b8/pyhmmer-0.5.0-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,806   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a0/ad/68a14e424200099462bd97c58fefe3b428a6522ae11b2e2b195bbbd6d15a/pyhmmer-0.6.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,807   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b5/2d/cd5b9729a37b0cdbe932461c79f74c75d17ac665f080f95633a8c275852d/pyhmmer-0.6.0-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,807   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/7c/e9/3a1f5a5aa46b482a3bca632fff9cb173c91ba5f02a96a3f5c0d730660519/pyhmmer-0.6.0-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,808   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/7b/72/119583107572a60f86e0f8578a7bf5d03928eeb3107d3e469336c5c41245/pyhmmer-0.6.0-pp37-pypy37_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,808   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5e/8d/2743d1944b793b1182955de2143776ec786c239e6c69fb8da18fb4db17ed/pyhmmer-0.6.0-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,809   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5b/e5/7dae65e0e3f3724535d49307db46975b4eb1bc62cc77a1b2dd26ddc308a9/pyhmmer-0.6.0-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,810   Found link https://files.pythonhosted.org/packages/66/34/775e5243113c2d97ae0ed9e6a39f145549bf85c6215840b728fa9a3f6b89/pyhmmer-0.6.0.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.6.0
2023-10-22T14:17:26,811   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/02/87/0d2511754cabbe05b89d15eea01a63f886dcf4697934c121df79b47a281a/pyhmmer-0.6.1-cp310-cp310-macosx_10_15_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,811   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/89/73/9dcef15dba0a3d194c2efd78a64478d9fe368745a5f76b4d7c321da3929f/pyhmmer-0.6.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,812   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/79/34/aaa3d15ef7bd33ef7e8eb8a92ac49e975355f708448e88fe4af98909e4fc/pyhmmer-0.6.1-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,812   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/11/2e/dfd760137a8b144e2341a07ca54ce170a83bd4982641ea31ee90fdfd0837/pyhmmer-0.6.1-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,813   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2f/63/7c21fe2dfe3cf76c8696fd612327733e3d985161cf70f255937433c3f6aa/pyhmmer-0.6.1-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,813   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6d/c0/91f4f28744b8b7f90f729b3f06b2732ce1c6fb354e6643585f4d5b9fc5ee/pyhmmer-0.6.1-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,814   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e2/64/f3503102d6a0127a703b6730c8c6512dd0a1b2f4616453194ec3e6552797/pyhmmer-0.6.1-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,814   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/32/ea/04d07b60a7744ac480c825cf31187e6296e031b4f514ad17a79f9973c882/pyhmmer-0.6.1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,815   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/61/46/4fa17c338e3db5820ca0c98ffe41c69dae85eb96372e333504b9d780bd70/pyhmmer-0.6.1-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,815   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/27/82/c9dbdf556c27204f3c7452f3dc6360b3d6a5a7a9d139a6dab992a0a33af6/pyhmmer-0.6.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,816   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/00/ba/e4a5a835581363c1a6809656518b2b5bf2b668d0cc8bba6a91aaab864023/pyhmmer-0.6.1-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,816   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/46/60/bd4cf94201733ee99960638e205d34547e1814a7fb95d2d5fc84df6c6423/pyhmmer-0.6.1-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,817   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c9/53/f6a6fd098e6ac64f2c0060e2e8696e573197898751b42fde2887ab62fe73/pyhmmer-0.6.1-pp37-pypy37_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,817   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a7/09/be194e9996ce5b9b250af009792194de38d5f38537a07b787d77bd7c2020/pyhmmer-0.6.1-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,818   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/7d/6b/d6adf535b346904db4dad94b57101d495fcb2a1ba2b0cb9a2b9b5c11aee4/pyhmmer-0.6.1-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,819   Found link https://files.pythonhosted.org/packages/cd/14/0c156809b9f92d3b0e7af334b0978392f15b2247c4bbb12c16d8f09a05f9/pyhmmer-0.6.1.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.6.1
2023-10-22T14:17:26,820   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1a/58/bd0cf943e8530a77288c09068655fc165b0c0b8e92c13a504236cef318f4/pyhmmer-0.6.2-cp310-cp310-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,820   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5a/7e/0ae123e0917f504cd5a286eef569469a4da0bdcd9c8dd2472c95b9cd52d0/pyhmmer-0.6.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,821   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a8/f9/72faeef1934a86623f8720070d2bfcd4518492e95d6afedf7cb093f06b9c/pyhmmer-0.6.2-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,821   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/95/f2/bd50114e9224a290b2a68c9651b9e35a950656a6829307a1a4a432fd45be/pyhmmer-0.6.2-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,822   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/74/c9/2ffa4ca300bc0effd026daaca1db9ccd718551439b73f4a792ef57ec38fe/pyhmmer-0.6.2-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,822   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/66/b1/957e1be040cd2b5778941c9a4b8caf283e328dc4608c61b54dc4f44dd677/pyhmmer-0.6.2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,823   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/25/4a/2db5464d2bb8e41bb346060fd9c3ceae2043c60af6621f04c8e49dbecae9/pyhmmer-0.6.2-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,823   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/60/a0/4d7a8f68dc85cd4cf70a39afc592ab67a2e703149887dc78f4d2031a3d1c/pyhmmer-0.6.2-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,824   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2e/b8/a5edf3701cb051f9b8f397cc0ad5312bad4eb6eb761c99ec294b21c922f7/pyhmmer-0.6.2-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,824   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/bb/a1/103087f3aba399a852295b2865a66357570a2c0a5c1c98ae1cce916ab468/pyhmmer-0.6.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,825   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d6/e1/4d9ff4eeaef082868cd75110599e2b123191d2d28570b52f837c7b4e8c31/pyhmmer-0.6.2-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,825   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/7c/ae/0b5f48c0b450b59edc60b80673c1c1d3a476fd0e1a67227c98bc24f5e119/pyhmmer-0.6.2-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,826   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a7/42/f72235b8fff6279f6f597c4766b42e5bf4d5f99b8952aad09262c191cb0d/pyhmmer-0.6.2-pp37-pypy37_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,826   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e8/42/0642f761e61259b3c5263fe33ff1b94fa5db04f416c2bde2b620daca9b59/pyhmmer-0.6.2-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,827   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/41/b8/cc677cadee7a7014e6700c87d8ff24d33d9118b6d1564b6b2660ddb7ca17/pyhmmer-0.6.2-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,828   Found link https://files.pythonhosted.org/packages/26/6a/f2618f79593b64a409dba66026d7fc921ae8837726f0085da1707239a8e4/pyhmmer-0.6.2.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.6.2
2023-10-22T14:17:26,829   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/29/53/70ce5950fa95a9f6c4c296f2d08ce0de8b78d66054f35746c9e38e5a7287/pyhmmer-0.6.3-cp310-cp310-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,829   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/47/80/ca9f919c80b20030c3f65ef28bfa53c95453b69e7a24ac429964df65c7d0/pyhmmer-0.6.3-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,830   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/79/d1/c6278687d5c1b292bdb69419cb3c241a33cd049487e3f6f8c1ea49ae2f63/pyhmmer-0.6.3-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,830   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9b/fd/18eb2593b4e78f2b4c354ab2c27f44c7005c871cbb88f5979363f447a3f7/pyhmmer-0.6.3-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,831   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/23/3d/29a3b664affa3d543bf179c4bc564028436d2d664750d07cb6747610d0bb/pyhmmer-0.6.3-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,831   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/23/8a/c9f6d67ff2081be71d5bab224f86dc9fbba04b3a9005d98d1bd4e7abe711/pyhmmer-0.6.3-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,832   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/be/40/6efcf88705d32d27951d1d664a8cbb2d43e7b31afcd44c281b24d02f6f0d/pyhmmer-0.6.3-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,832   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/23/4f/5c7b8169544823f5a72bc2c6471a8f0d1f4d009ebab0ed93cef5c1e770cf/pyhmmer-0.6.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,833   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d6/b5/82b7212a91c29b78d1de6a8d701bc49bf33965a2f312f12892b56e66d6cf/pyhmmer-0.6.3-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,833   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e7/cd/e8865ac7b2f95a62f3f31ecc1897006d8bd88d14516a8ab91409fcb4ed0c/pyhmmer-0.6.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,834   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c0/2d/2fa37cb9c2b146fbcb6b616cf04750e7cb0654d9f3654426f5c34ec986a6/pyhmmer-0.6.3-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,834   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d3/8a/1f93b031bf44594726d5381ae9e701b44147707375140864becad63dc960/pyhmmer-0.6.3-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,835   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b0/fe/6d1566d1b58a9cd0519ee81760177350e2bbba31683227a426e5485cfd61/pyhmmer-0.6.3-pp37-pypy37_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,835   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/30/d4/c43a67e5b31e63a52e7a4204502adf4e43e7c3d5b2f453789d73935dd027/pyhmmer-0.6.3-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,836   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/63/f7/a794532449c381535fbf2955c1707bc89a823d7454658df2ac13eb83d6d1/pyhmmer-0.6.3-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,837   Found link https://files.pythonhosted.org/packages/97/96/56a83e026412eb4714f313c444393453ef203e4ca1189de2c9907a9654f2/pyhmmer-0.6.3.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.6.3
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2023-10-22T14:17:26,838   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/49/f6/375ea7dec9ec46fe919687f992bf2f8326a7f08449a94b3fa316a02d67de/pyhmmer-0.7.0rc1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,839   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1f/aa/9f76d8281d452ce142cc95cbfaeac15c76b2960949b2f5c9e12695e53cbe/pyhmmer-0.7.0rc1-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,839   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0f/68/dd15664d24aceaef5e94f961bffa45d9095d8f8499d64e78eddddd1ef7a9/pyhmmer-0.7.0rc1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,840   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e5/01/cb2f9126a8cc8a16f12651d80cad00f1c285451ba20ead2b461bb86ff5a7/pyhmmer-0.7.0rc1-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,840   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/7f/16/5269fa02ad5001fe304296e4de68cc3b316981363a07e0f620d034520e33/pyhmmer-0.7.0rc1-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,841   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8f/6c/66722b1c98eb72b6f2264cda1392461ba1a7beefcca6e6d56edb7a58baab/pyhmmer-0.7.0rc1-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,841   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/88/b3/1c509150cabbc5829c99e24bb0d27102407421be6eca4f93696a9e3c6c6c/pyhmmer-0.7.0rc1-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,842   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9d/f3/d93ce4c8096abe40f469514dd94fec0c6c7e7b687f2cdd00c40960b17262/pyhmmer-0.7.0rc1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,842   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5d/b7/2c01ce15f1931c19f141bcc471ae8aec3238ee6b7ff32e62b0c6488dcf5a/pyhmmer-0.7.0rc1-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,842   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ef/dc/176eed80e4ead0ffc4fb150c48e98bba98063ad079df4dac8435448ce05b/pyhmmer-0.7.0rc1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,843   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/25/4d/ae2e1c934c3e4fc67f8869b12b1333cfe908b99299aed8ee7dc8f7eca7a2/pyhmmer-0.7.0rc1-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,843   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b2/97/755b4f2c2b09ad2266fc38914be01645b96d771c6e3351ea9ff82b2e7310/pyhmmer-0.7.0rc1-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,844   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/be/36/dac07936503be8a2b9461b4e55b2434d5d2cc6b2c385a2ffd0c2c80bb347/pyhmmer-0.7.0rc1-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,844   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6b/34/545b15abe131691ba9c0445567481c2a08eb5cb2e82ea81f687ed9ace9b8/pyhmmer-0.7.0rc1-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,845   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/09/2e/a4931aa6ee3a39b72d650c44fef2282256cbae34f401d00e78c95169918e/pyhmmer-0.7.0rc1-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,845   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e7/66/7146d3ffbb6917adcb31600e6b5037ecaafdf2198efaabe8b26519d3aad1/pyhmmer-0.7.0rc1-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,847   Found link https://files.pythonhosted.org/packages/07/f9/aa30f9a062a03215706fd914a193d012c869409f0883406963f5097ec7f1/pyhmmer-0.7.0rc1.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.7.0rc1
2023-10-22T14:17:26,848   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5d/64/27ba87f3a6b5bd028bde8e63579e4fc7729abb207b6e9e700cbf51dc7b30/pyhmmer-0.7.0rc2-cp310-cp310-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,848   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/57/5c/c79dfa8fbd70302047cd5af55d5a5634ddce263c160cf0bbc298817b28a9/pyhmmer-0.7.0rc2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,849   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cb/8d/c56e4948c9a2d712e48ef730fa4a9689625d68fc056bbef60ffc0ddb06f4/pyhmmer-0.7.0rc2-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,849   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/49/77/4a2cfc97cb2432d41d16bb851e01360e3f6fea5579c153083220927e779c/pyhmmer-0.7.0rc2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,849   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/19/9f/c9bd67b4506ea74c87aa2170245f52a7ef31d9ab0091c1f341c6cf76fa9b/pyhmmer-0.7.0rc2-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,850   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8a/03/ee7fbc006cfd40bacc68f90e34ae6c0648eeb66e63f1702c57a595f23beb/pyhmmer-0.7.0rc2-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,851   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/47/f6/b77002e48c526bdb1ec0bee0697ee021f31702ff7618adc1f7c8458638d8/pyhmmer-0.7.0rc2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,851   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c1/56/143d6ec67af6539abafac7d5ed7eda2f7dc4a22dc7ebeeb491a808a923a7/pyhmmer-0.7.0rc2-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,851   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c8/35/66d385727a9178511182bfe841a12d45f7f64425fdfdd9ed0d93e6a74bb8/pyhmmer-0.7.0rc2-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,852   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e4/d8/d5d5bec33f7ef7e4162e43e846cec992055d17864c098a1e55b96a34050f/pyhmmer-0.7.0rc2-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,852   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/39/c0/6a46e969f7c1f77f5cc19011827469176b0569cbee1f2ec80f5865f49ad6/pyhmmer-0.7.0rc2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,853   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1c/92/5602f15a7bbb92b08e92e4636813015754067aa97c0511ea1801852c1e66/pyhmmer-0.7.0rc2-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,853   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5a/ff/ece5bd11cf4cc3ec6f664f0e3a111ad6dcf207d3f6ec2ad96165259a412b/pyhmmer-0.7.0rc2-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,854   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2e/d2/b4d94b6921db1e4c69e9f41bb559d66fe18a2a098cde1e6434706e1eabc6/pyhmmer-0.7.0rc2-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,854   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e1/55/c39dc94317204fd84d5d8bbb6aed951be0706970eb5e3998aa0a4a35f46b/pyhmmer-0.7.0rc2-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,855   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f2/b9/46f7e47792b6dcd5d3330313efceea13105448ae6f6cb13af72cb60427d1/pyhmmer-0.7.0rc2-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,855   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/31/df/48df1569e9c0b21ad86060b804c14fb3c91c3fa5aa95f09db8ff0e4c83e6/pyhmmer-0.7.0rc2-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,859   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cf/8b/45d7eb18b457d0a36bacee35ad14a52af74c6ad5eab2901492996e9aa4b7/pyhmmer-0.7.0rc3-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,859   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/41/75/25d2b67c70032fd8201bcead370e87316ed0531854aaf2b9f3061623fe33/pyhmmer-0.7.0rc3-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,860   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/10/f3/34c8cd78136ee6d53b229005b76e4949a99723c5b075683928676ff8a8ab/pyhmmer-0.7.0rc3-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,861   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ba/8b/231ca0dbb96d64646a22c943988d7d94ffea8b77335f943ab23504493058/pyhmmer-0.7.0rc3-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,861   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a9/ed/b906f6c410f04eecda1943c731e45a73448a98ce8ca04984bfff107b217d/pyhmmer-0.7.0rc3-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,862   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ff/2c/bf48a68a87561fa1e263ca6cb00d1345794280070dd484845aa2d4cf8844/pyhmmer-0.7.0rc3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,863   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/48/67/2c8cd7621f44f1cd92ec244a9463c00c90f02a1fd5efe1be5617828055cf/pyhmmer-0.7.0rc3-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,863   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a7/73/a2db2e27de1d9b6006d6db695b5238e850b9431ea7c57eea6988a6664b31/pyhmmer-0.7.0rc3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,865   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/90/e1/dcccd398039ac13a2a23114fe29ba40a1270c0498b9c7d15dccf098d02db/pyhmmer-0.7.0rc3-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,865   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ab/22/86eaea1f4be5e5dd587f216169ba9f7a445b166b719c4fb364df45cf5eb8/pyhmmer-0.7.0rc3-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,866   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b2/50/e377323457ca4ac99d9a374e5a2d23cefc1007eedd186a1e33a4ed5531fd/pyhmmer-0.7.0rc3-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,866   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5e/99/f426e48fd4c851ff69b0d669d9c7f782c7c8c0a4b753dd93d7dcdc18a91f/pyhmmer-0.7.0rc3-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,869   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0e/48/b2724ab2e2b17767c9c89ead899fb8e16378228c2c5e7b596861eb8e6c59/pyhmmer-0.7.0rc4-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,869   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/41/05/5e72907607e3cf2d51cee789ad84fbf627d638f4e7c437c0978fc4e3d29b/pyhmmer-0.7.0rc4-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,870   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f9/2c/3eca6732d620870523194f097bd4648d7a6bd7f85aadc50c0dea34488e4e/pyhmmer-0.7.0rc4-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,871   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a5/f8/6cf5263d5644cf1c80d6bead0aad5b66ca9ec122e2c534f1cbf83dcac95e/pyhmmer-0.7.0rc4-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,871   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e4/df/15cc4cfe21d13fea3111c44ac170b354bd372bd75894b716e6d4ca211ee7/pyhmmer-0.7.0rc4-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,872   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/32/be/325c4598931621a786765a05aa3feda8c618cd7c7441d374844ce56fb0ae/pyhmmer-0.7.0rc4-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,872   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/bd/b9/97c2389cec088ae3cd65d945ccd7fda99140a831b290cc1938708188af48/pyhmmer-0.7.0rc4-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,873   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e8/27/a5f9c4c906b5e2047bfa71709d96c26944508615dbe08f4b2fafd952564f/pyhmmer-0.7.0rc4-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,873   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ab/c0/3ef8ced20ac64ab83d16d855b23540751c1626d1d5b8e8cee4440bcabfb3/pyhmmer-0.7.0rc4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,873   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2a/df/a287f8b111ba8688c5c58e772e6d276fb3c14515249e39a50515160a85d2/pyhmmer-0.7.0rc4-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,874   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/71/e5/96ce896b08d17b9114817c947683e144e760f58bd9f48f53f5436ef25079/pyhmmer-0.7.0rc4-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,874   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5d/a5/aa8fc0a41d66c95b60097ed9aa5d11cd9b1be853c1ffafeca1e42f1095b6/pyhmmer-0.7.0rc4-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,875   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ba/7d/284867ffb3cd7eac7de62716e1dbb495331004766acf8f49419f0d04e103/pyhmmer-0.7.0rc4-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,875   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a9/0f/e0fdfe3a3872753e8205280a83f8bfb09cdd56050bfb84137627c905bdc0/pyhmmer-0.7.0rc4-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,876   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0d/c4/049d1b55164a4593e7d7ef55b6f0364b03a7c863f7f9d6a4730c5995dc20/pyhmmer-0.7.0rc4-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,878   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/3c/74/ee460564fd2c0d9404e75649c4a5e476d962c37b018de89592f7960d1325/pyhmmer-0.7.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,879   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/36/e9/3d4b55e50c0815ec25f18e367982e588bc84033e6b8d5417671210214dc5/pyhmmer-0.7.0-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,880   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e5/f9/c669b9adabe8996277e8a2bb6f08568509ea95cadfcb76121150d24b5f93/pyhmmer-0.7.0-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,881   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/4f/54/985dcf1e22569b0904bd17b1f17e713dc94a7ab13b767c9f5d90f54daba1/pyhmmer-0.7.0-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,881   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d7/04/5277c738b8789802cf308662e7eb69535a5dc04d77088937cf749173c7e2/pyhmmer-0.7.0-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,881   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/46/cd/2ae79c367d9ac8df13d62cd7a7c33f8ae37c4b7084886825e616862fc7c3/pyhmmer-0.7.0-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,882   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f7/af/dc4680fa932f2bf899f08438eb08bd271f2602454a0a0a8a2fede8bd2abe/pyhmmer-0.7.0-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,883   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/51/03/a89c205cef3d63d140049a204977c5903adbcc2fffcd37f903a155fa5cc8/pyhmmer-0.7.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,883   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/81/47/eeb9204615d3acf39fe7ba1f5d0209d263c747eac405ea97e3ac6428c7a9/pyhmmer-0.7.0-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,884   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/dd/15/3005213eddd959f34442df93ebc4e44c28bb223ad9a7fa407ecc8b788e92/pyhmmer-0.7.0-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,885   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/59/e5/abea9b8c2217a67965d536d91263e89b9e1f896b54608a9e1354e6b4f38f/pyhmmer-0.7.0-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,885   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9e/17/03f003657c307cd45ab90e60c6ac65a72b895610952fcc41bcbb16c20013/pyhmmer-0.7.0-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,886   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1e/d8/f7b849eb87315778cc9a4295372bb3c5680616558edd48b4cb48a2cc1eb4/pyhmmer-0.7.0-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,890   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/3a/cb/fcf2cdb81b840f0d81299dad023301851aa18832f2dfd9f35a6b502f4ccd/pyhmmer-0.7.1rc1-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,891   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1e/24/b5fd39220f4a8837de8dd1608eb53b724b123d57901c25517ea6f51f0924/pyhmmer-0.7.1rc1-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,892   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ab/88/677dff90707b1581bf59d40a2afd52173654e6ac159170a80ed9622aa96f/pyhmmer-0.7.1rc1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,892   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ab/95/0c6493ed1170c5cf11fcfbcbcb0272117d9b7d9c6810604ee0b54d809d19/pyhmmer-0.7.1rc1-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,893   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/16/b6/ffe3c7a7b6b4812c633a1ec63624e8c684c2f9ae9ec3aa2410adaf6d8a35/pyhmmer-0.7.1rc1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,893   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5a/3c/4417c019a459d64aeb93b5583c5318d5dbbcceca09122c7b2dd70ecfea9f/pyhmmer-0.7.1rc1-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,894   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/21/17/c60036e61557900aacc140b1203dd88269f9f4c74619b1d93338cbb0f3aa/pyhmmer-0.7.1rc1-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,894   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/17/be/1f0953d157c07307f3223edc3f7cb55a2f56965a9f7c864f0bf8e0dbff95/pyhmmer-0.7.1rc1-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,895   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/da/d6/3f260928c49eb449d5917cb1820f54826544cb5d5073591b6595b20926bc/pyhmmer-0.7.1rc1-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,895   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/01/af/43f2bf25a61767df0fac21c668656715d45ce051363d1ee7f897a11baad9/pyhmmer-0.7.1rc1-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,896   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8d/5b/99159669ed9c78d16ad48eb9cfe9125b1de55b89c6896113db6d7db01281/pyhmmer-0.7.1rc1-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,897   Found link https://files.pythonhosted.org/packages/ba/63/dbf48469522286800379be94c0aac9ca387e8b55dd2aa3631d25aa6b3670/pyhmmer-0.7.1rc1.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.7.1rc1
2023-10-22T14:17:26,898   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/4e/98/68ecc5a2aa3be261990a6011fcf7a5279895e8d04ec92802771dd216338b/pyhmmer-0.7.1-cp310-cp310-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,898   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c7/1f/314985aa53011a9b7a217f92cba4448c77c535c55b48308def97d4ab40ab/pyhmmer-0.7.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,899   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/95/63/3843021512df961cac8ea24e3796995ea0206a35709bb019adc471c5e115/pyhmmer-0.7.1-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,899   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2b/62/e270b0e792b85332ebbaccf137a9b3c33ff035c4be12ec3760aed67dd5da/pyhmmer-0.7.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,900   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ae/0d/f38735e35b50b639b70c9a74b58ea25614a81b0a188d89b692139001bca0/pyhmmer-0.7.1-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,900   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2e/49/2363ee3fe7995921638cfa8f2df825168c47e0bd05f24374319e6bc8fa5e/pyhmmer-0.7.1-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,901   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9f/b1/88afa91956eb78f5b19f3e44fabef47e0bc8bd2028c33c2f1740a2ddf406/pyhmmer-0.7.1-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,901   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/29/a9/acec031f4435e796440521c54f78f978cf91203615c29b07c7c9697840e7/pyhmmer-0.7.1-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,902   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/65/16/57009ec67d1b33dc1bddfd40c054d0fa2ed0970c357249b81ca9b2c80ac4/pyhmmer-0.7.1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,902   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/65/61/e5d74affedd6c3ff3d2c17e8dd278921194411035ff093dbb17a8f3e4525/pyhmmer-0.7.1-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,903   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/93/f3/b3f6892b4bb54f3e74c255b7e977acb1b0149601197c40d0e388c481897c/pyhmmer-0.7.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,903   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f5/95/fb8f90d881b6253d0ca29b0fd714b2237733721aa108b20272801822d7dc/pyhmmer-0.7.1-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,904   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5e/77/bde94d470ac47242abc0754a02a21311339c2d4fc367631d91a940946ab1/pyhmmer-0.7.1-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,904   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/83/d3/462aea5aca8f8169bee7b77b380d0221bb8b452e07b54967b352fc9383bd/pyhmmer-0.7.1-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,905   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/95/a2/173fe1c90b803e6bfef9190ece6e479552be0f8afdb606e8639d543a35df/pyhmmer-0.7.1-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,905   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/45/64/476e25cf2eb37d76881022a6c42c8da9e06a93b1af51fc596ede5c6d68ce/pyhmmer-0.7.1-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,906   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/22/b0/978fe1e68b3bdcfb1662358de0b11229dcb0af7b04fec6efdabe0270389a/pyhmmer-0.7.1-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,907   Found link https://files.pythonhosted.org/packages/08/b9/653e773ff15145759bf2b8365c88e2f5aad1f30addbb1eddbde05bde02d9/pyhmmer-0.7.1.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.7.1
2023-10-22T14:17:26,908   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/23/3a/5cfa3d249b3b2d9a15efefe9fe084d3cdb02f42a986f923165ed04d0d9c3/pyhmmer-0.7.2-cp310-cp310-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,908   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ee/77/b3e1ed830c69047796d6368d0e4e56280e3962650af7a7aa90fd5fada9fe/pyhmmer-0.7.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,909   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d0/09/566484b8473a0216d855221e6b21b3ed6a7c8ec31bb08966cf5ce6dbe5b7/pyhmmer-0.7.2-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,909   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/53/8f/886997e0b208edbab94576eb4dbfcd56dcac054700f7246a15300098e210/pyhmmer-0.7.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,910   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ab/20/82e0a7504688cabb764417b4d141b0bb96f86632b8e499773e0dd391c9e3/pyhmmer-0.7.2-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,910   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8d/d5/e46bec7d9e8c5e242f7f6c3286f8af3bc2ae4bf9ea42d91e1f8d426b7561/pyhmmer-0.7.2-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,911   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c8/dc/9356b86de2f272c8e0cc4f577c72d3ae4e86727e26491f80cd8dc8063a9a/pyhmmer-0.7.2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,911   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8c/36/5fda154acd4dbde82c5f8ef5d4bb2532707c8b6b1138645673773ac139f8/pyhmmer-0.7.2-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,912   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0e/e2/f830bf6972a294569182d6ea4026af2a902fd6cdd6f06dd0ed62bce231e5/pyhmmer-0.7.2-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,912   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a9/39/0098a2887eb2db25c5cd259dc8635beca3b1aebb18d56b95fad851592223/pyhmmer-0.7.2-cp39-cp39-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,913   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ad/cf/b678ce405273a64b4295f73a3357e988b2bce163862a9730a4b81650c626/pyhmmer-0.7.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,913   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/81/27/44ffc8ed4f96c4c5cc2fef672cfb66c9d84f1f26bc903c812b0b4fa4d673/pyhmmer-0.7.2-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,914   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b5/c6/c57c9f59c6d5c6e177aee95307f863bd058585dd0b0bfca4c34f7f13cd42/pyhmmer-0.7.2-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,914   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/71/db/4f93af5a00686347346a325ac84cae95fe6af81681c3489c83ac27629862/pyhmmer-0.7.2-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,915   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d1/f7/4bbda84916bb53d5427da8950d2c057db73fccdc33c632c941c524cdb53d/pyhmmer-0.7.2-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,915   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/81/03/cad0781ef73c4f4f52937840947c8d49cf2b2cbbd070c44b59e31d263a69/pyhmmer-0.7.2-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,916   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/15/65/80d52997be40674fd2c69b9828b058760e41b776b78af40a72902b86acd6/pyhmmer-0.7.2-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,917   Found link https://files.pythonhosted.org/packages/df/a9/2657add69b3315c419cb618bd3d7fd5980a6b0f30599111e6ed64ca3cef4/pyhmmer-0.7.2.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.7.2
2023-10-22T14:17:26,918   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/43/c1/73a9f4bc5dff132e66d44aed2c65fe49d803345383ad1ce3be8263b90e67/pyhmmer-0.7.3-cp310-cp310-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,918   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c2/da/81f51877f44a77d141dea4b76937158affd960ef965ebfe0b5c13402a8f9/pyhmmer-0.7.3-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,919   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/7a/1d/f1f7d1e4f936603678831b3bec693038ae09d7efd6eebd1324d0942c1659/pyhmmer-0.7.3-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,919   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/fb/68/6fdcccd7979cd0092039016c3eac4caa02a11c1d3890ab0951311cc07744/pyhmmer-0.7.3-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,920   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c9/a2/b2a5784e37a247475e4a58816ccceec0734c5bbbc1a9a231306fc6735d8b/pyhmmer-0.7.3-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,920   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/81/96/ea0e67c0fd99012756abef527adc30a2528315cfb75944757faad9b78c27/pyhmmer-0.7.3-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,920   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/62/49/d59f2cc10afaf02538988eae5d76975a0d402a2b641fe161d46a5a3a5b62/pyhmmer-0.7.3-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,921   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/fd/74/2dec67a4756891cf0b45fa2ed3a1ca0d4a06ea3a3064090d20cf0f47e162/pyhmmer-0.7.3-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,921   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/04/8a/c3403218b9a93886aa949854a90b7ccf6beff39c85a0f4f722f31811202b/pyhmmer-0.7.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,922   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a7/33/b93f0ad31578f0c73948c8db6cec68f6af01df5a4df1da0727c9201487dc/pyhmmer-0.7.3-cp39-cp39-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,922   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/be/4f/70cf9da314d59163bd93c4a3cd8a4d0c6caa53937cdd6464c54d6a0268f4/pyhmmer-0.7.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,923   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5b/82/773159b8884f7a385e53499c92514ab66d3acf4f486a476675e2543d4c53/pyhmmer-0.7.3-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,923   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/70/a0/f5001efc6131cccf6e8e8f53026e28aba2e5effb3a04f131ded183390062/pyhmmer-0.7.3-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,924   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/23/1d/3f8ce18fe6ecd457a3692c313ebbc956f3ff2f0264383e4a5ef8073c20e1/pyhmmer-0.7.3-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,924   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9b/58/1a70407899294d0acabfefb2ee95027aef14b03fe0501cc5e0673c3896fa/pyhmmer-0.7.3-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,925   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e2/db/62121a05d99bb99e7f14f0fddb97e82ae2bca48c891dd16d09f99b3eceab/pyhmmer-0.7.3-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,925   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b3/56/a1d60989df6dd057fca1566c4ba98373572236c886241e68e96af82fe92b/pyhmmer-0.7.3-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,927   Found link https://files.pythonhosted.org/packages/63/6c/9ba4ec4440099d30c4821e8740edb2340e6192b934e81057f7921666c1db/pyhmmer-0.7.3.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.7.3
2023-10-22T14:17:26,927   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/dd/bb/fdb1068e287b6d09a73c1f7fa16aa2a850f0222f6419b8dcdc118815d409/pyhmmer-0.7.4-cp310-cp310-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,928   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f4/fe/23f9ad6e15feb0605df76f7585d681d79675982bf34ce4767f9ad08a79d3/pyhmmer-0.7.4-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,928   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e6/c8/64e1960c86439c6002664077b2c25dd6543d65b0dd204c2e4c064fa0bb6a/pyhmmer-0.7.4-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,929   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/4a/3c/13929dd0c58c62b1513bdfe818969e6f2ec4da023527b38565af60b91b8b/pyhmmer-0.7.4-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,929   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a7/44/2ca763c3a425e922554b8eb10113ceb8c195639c6fccea846da2551cd923/pyhmmer-0.7.4-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,930   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/68/40/7dc955411414cee0db769d602cb2e8d593707786c9572bec05721491c5a9/pyhmmer-0.7.4-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,930   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/56/26/b8f4f0f8c71bf51d30885978636e4281ce8130bf57136d2d048da93ae2a9/pyhmmer-0.7.4-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,931   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/3e/63/5219330ab124df581bc1d23046ff5b43534e606e9bdcf2abfc10a50b62f9/pyhmmer-0.7.4-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,931   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a7/7a/7e3d72b99ff0cede0022113042bc09f911041437a8f80827103b660bcecf/pyhmmer-0.7.4-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,932   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b2/16/e251dd701b9f1d6a63e3cca421108fc6cebb8538a9f6869296c6644a0c2c/pyhmmer-0.7.4-cp39-cp39-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,932   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/52/de/a269128e8891b97841930cd8addac3595dff08c1f90028619f7c73359cc1/pyhmmer-0.7.4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,933   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6e/f6/44c176d316f9becce866f4536f026e433df3939052b5ad922013e324c400/pyhmmer-0.7.4-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,933   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0c/2f/8b471542f68ccfd607cbd8edd5416bb054c454349f72d1ec1aca4546ab64/pyhmmer-0.7.4-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,934   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5f/5b/56febea19382034f45f8efd31e4cc025e88d47fcbf3b8a702e67daca65d2/pyhmmer-0.7.4-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,934   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/3f/4b/b94e77c892e9b6c656e753fe00a2e244dd63ceb1114004d3ab4c66940fc3/pyhmmer-0.7.4-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,935   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/df/9b/9dd24babb7f1ef8a2fc26e39684ecc85193685b14cac93b1ab3821eada03/pyhmmer-0.7.4-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,935   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a0/0f/687049e993619cf051ce153f9f5d195290f9df872a46ef5ed55f168cb073/pyhmmer-0.7.4-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,937   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e0/76/9d254f4f85a2b15718dca73e2091837e359b3b19eb30d47ae15fc236c088/pyhmmer-0.8.0-cp310-cp310-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,938   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/da/4e/6698347f2848bf6e953daee133c6cc27fb7f340a1946815cc9566a3a3539/pyhmmer-0.8.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,938   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e1/72/99abe4102e7994572f8d786abaaa8974352e917a690e888c2becc89f93b6/pyhmmer-0.8.0-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,939   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c4/a6/2560bcdda70fda6cb767272851a84c700ab754bb3193ab4e7a077d10cf3d/pyhmmer-0.8.0-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,939   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/54/80/54e8e341dd4dbe26f6421db55e52a5381403c5a7fdb505b6348dc9661e07/pyhmmer-0.8.0-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,940   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ff/c5/7fd7e8f5418e609b6d6b12c5a24439943d85600a98ca94a248cfcf5aa1dd/pyhmmer-0.8.0-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,940   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9a/d4/0d65fae4b288faaec2eb9cc27db600a01dcf50be1ad4961904340e1b74f6/pyhmmer-0.8.0-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,941   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cc/73/fe5f2fab87655bb9eb30f9b6177b1d4b1593873d12960a5e4fee74d9c9f2/pyhmmer-0.8.0-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,941   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/17/8e/1161db151a5638878ffa1de64d6af0133a3a24400cd02ae6967aef498c4d/pyhmmer-0.8.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,942   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/71/2d/6d020e9303d2422ed199d3181a96117b25366bef87fd4e1d49f964644a72/pyhmmer-0.8.0-cp39-cp39-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,942   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/bb/d6/df65848b5f3c3ea24a7a1a19fee4fd559377953d62e048bec4eba7b68043/pyhmmer-0.8.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,943   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/88/90/0f0af36b0861b542292872bf99696eb852bb2ffdae35e02532b924a91736/pyhmmer-0.8.0-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,943   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e6/29/5a7a4bd1ada554e49d34d8050ae571e5679f80fcae115ae2e4794cfac402/pyhmmer-0.8.0-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,944   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cd/2e/5a9fdfa2fa8e7896954ae2bdceea262ed56668704d442e7b4a8f2cfca534/pyhmmer-0.8.0-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,944   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/18/64/3883ac90e9e1cd3826a4ba4872af387f914b6879d76cb48e2ccca4d589ed/pyhmmer-0.8.0-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,945   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cd/5e/537eab68a1a757accf9bf36fb86913427225f548bc5b721852024f0c49ab/pyhmmer-0.8.0-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,945   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/74/63/648053f4d3cc6fe8f86473265e709fbdac17700a2618706e2eb83d219716/pyhmmer-0.8.0-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,946   Found link https://files.pythonhosted.org/packages/0f/5c/14aaa03cfdaaf956e079eb555c17b6307858b99f1c3f80ef027dbe3910bf/pyhmmer-0.8.0.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.8.0
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2023-10-22T14:17:26,948   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8c/c5/01ab9a15c9263612433b128d1e65c0ee1f3cb18b9503c8ddcacf38837914/pyhmmer-0.8.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,948   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c9/4f/9013da7fe5689a83b3200fafe885b1bed7832a93160c7f53d4851d5914eb/pyhmmer-0.8.1-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,949   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e2/5e/3d4df0d800d8be0c8f4a90d493404955fb3ff71cec1ade7bf3c032474b28/pyhmmer-0.8.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,949   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/28/46/5e13639f2d28bc37119046ddc63b6aa1b2ecc1cd911cd03c6de1bcaa2a13/pyhmmer-0.8.1-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,950   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/75/ed/e314f33388b55a21b4e2ddee8b3df2a38ff806af6428dcba40415b04b997/pyhmmer-0.8.1-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,950   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/36/e0/8f7d67c887b2acbed5d598e1a8a130b627e72eaafa483bc6314061ec8e53/pyhmmer-0.8.1-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,951   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1f/27/350d8e7551a1df76c4a4c21b2194f52f442fd6da03b1a7058c8a3dfe6c38/pyhmmer-0.8.1-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,951   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6a/9f/6d6cfc59ce70e3a74bdbbef07ab0a14d6586d754404d6b8f4f7baa0bd32d/pyhmmer-0.8.1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,951   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c2/93/4bc40a01c44326555939dffa0cf4c8124f62a68e6ebb55342b7b8f9d5e70/pyhmmer-0.8.1-cp39-cp39-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,952   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ac/34/f2758c62dc6bab178927c1677f19aabdff0fc663981fdeac3e6d4b75baff/pyhmmer-0.8.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,952   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9a/ea/326a14e08d354de541be7be649f769db590a1f3b536494b0dfe98ceafe60/pyhmmer-0.8.1-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,953   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f7/a5/2ab50f4c09e8d03b588bb8ffc474ba51320af2f54e08a0a8093ab4eb7778/pyhmmer-0.8.1-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,953   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/04/73/14e48a4ec9ebb3988168ba0763e8982bd7f5d6abcf375858883700e00010/pyhmmer-0.8.1-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,954   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d5/30/2299b81eecc97296c8ebddc568823dea1272ae076726fc1d32f4f74a6218/pyhmmer-0.8.1-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,954   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f2/1a/daef14e72d7b7115c814a9fcc2ff6c34cd79b777221d9b374e0452724a03/pyhmmer-0.8.1-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,955   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f6/fe/6568f474e66ade3d023fd9c1a9d3e9c0d612eebb13fd2abbcaa32e0c07d5/pyhmmer-0.8.1-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,956   Found link https://files.pythonhosted.org/packages/3d/12/beb37509be629206b9ca05f631533271c4bc4ed4f52891f772ca1ec0219d/pyhmmer-0.8.1.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.8.1
2023-10-22T14:17:26,957   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/14/ee/272986b394c29bd06766c742c2bb717747d0f10fe27b9d639878d0b91b7b/pyhmmer-0.8.2-cp310-cp310-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,957   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8b/7f/11a8225560199c6b92c062668c24691cfdf4d6803930ea51578c0ae0f2c6/pyhmmer-0.8.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,958   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1d/34/b23cdbe9358907f35c6cbf7af8fd223ba982372fa67842540d2a453bb6bb/pyhmmer-0.8.2-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,958   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/35/62/2dd4b543a1be28c87b20c0176c7f6c9793fec2f948c67dc4d9e15e920d74/pyhmmer-0.8.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,959   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0a/b4/d6842c31ab612714e693d13852d0b8e30877583e2c1e4c7a54e5072cf6e3/pyhmmer-0.8.2-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,959   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/38/04/689d911435b871b9f9beeed09997002bd8869a80efb217cd4dc12fa3be0c/pyhmmer-0.8.2-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,960   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5d/f2/5bf9ca5b718e665b613914fa33b5299040268e289c8bd0b0794c5429981d/pyhmmer-0.8.2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,960   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/19/cc/dd603f6c31b90171f2a74e8bc83cd981e3e5c9275035127f32b2e709e0c1/pyhmmer-0.8.2-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,961   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/3b/96/a3db6773bdb59ce89c4b5806de0ea3d37b07c4bf930fab20dbc60873c737/pyhmmer-0.8.2-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,961   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/48/aa/173348482e94cb75d7ca8140cb644583294a51c947263b075ae98d7d451c/pyhmmer-0.8.2-cp39-cp39-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,962   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/db/d7/8cbf5c5a3b14fa0ffcbf08c862f2f9e2ac6753be228af04e8feaf724b4da/pyhmmer-0.8.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,962   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1a/ee/d6c8985da391696aaa09eb694172201c1eead5f366a8e61790c735c525e9/pyhmmer-0.8.2-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,963   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/47/d9/4e2212224e53a8b9373c0831a3c16d115dce9c6e2c847c867a1f1b8284fd/pyhmmer-0.8.2-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,963   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c0/f4/28ed40514d1f483669b4f80de51a7c1770ebd84255890ea468f641ef17c4/pyhmmer-0.8.2-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,964   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/7f/64/845f17d9680d7703d8deaa729141dd33da734b9602cebc224a7533c0f239/pyhmmer-0.8.2-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,964   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f6/7c/17274676ff47462404c50fd7d03eb2793ab33d0405fb8830c674f29cd7e0/pyhmmer-0.8.2-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,965   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/81/6d/1fd4669db2d3a14e80bdb59377b0a537b26fb98798cbce9a4ccc2943d5b1/pyhmmer-0.8.2-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,967   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/01/8f/cd5c956a65373f873d4bcebd59546abf2103f3845b81da10d7897a9cfddc/pyhmmer-0.9.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,970   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5f/aa/914bfceac46ff2285edbb90bd21e9cfd87440cc01832d83c788c079f87f1/pyhmmer-0.9.0-cp38-cp38-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,972   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5f/0a/3daa61bb57b91e999fcd546a3acb9dc50920c683a9475692975f1a0059e8/pyhmmer-0.9.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,973   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6d/8f/fc5251bc0c344176a4208ab7c7f56efc67d924c8ad9b5e3e7594efef517e/pyhmmer-0.9.0-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,974   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/47/e3/e830f6d54ae9dd2e07c6e399d18f335749bda3e2eb608682494a447c8988/pyhmmer-0.9.0-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:26,977   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c5/4b/dd31e8ed8905a8a61090cc6c06f562c04aeda9bf44d52ebec78caee496ad/pyhmmer-0.10.0-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,978   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0e/86/f5c3b430b18f73ff33defe4e99ef575d9eb9be2d18c2976ab0554c9a3bcf/pyhmmer-0.10.0-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,978   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a5/0d/e52925d9359cfa88c93698617aaaefcf1582c9d3e6d6c421054748353e9a/pyhmmer-0.10.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,979   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f2/66/89c65ce385dc6d3502dae12580ab30326ae33602cecf7857a59dbb5f819b/pyhmmer-0.10.0-cp311-cp311-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,979   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0a/0a/13cd5620acd71e03994d1fd25435b5b323da5c116397207d2b4f07afb023/pyhmmer-0.10.0-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,980   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/41/9b/8f85b8a37eb9f7a8de2c75352d5bb51e92b3c3932fcf50af4250c8fcf28b/pyhmmer-0.10.0-cp311-cp311-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,980   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/33/7d/8c8d4985794d4738ac5f8924bda49d1df26efaeef6e625eec9fd6390dcf7/pyhmmer-0.10.0-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,981   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/32/47/eb629f92b5d9e962a3a94bbc6c05062bb8e07bafd3f884973c84595a1fb4/pyhmmer-0.10.0-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,981   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/4c/7d/5a0db99a083cd4d16f21f44e876622c7c9219966edd570c95fec572cf927/pyhmmer-0.10.0-cp36-cp36m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,981   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/df/87/0282f4d9985335ff0f25ea0da686b03bb4d329c45f76063302573bf2f1d5/pyhmmer-0.10.0-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,982   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cd/6e/4a1991cd46e46f18c85f418a365d632ffe7eff27c27505f83acc92930e15/pyhmmer-0.10.0-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,982   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9c/94/6aa2ca0a5461a6eb9941099d9ba8d7297f8e6d4cc0ede86cb125e34f17a4/pyhmmer-0.10.0-cp37-cp37m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,983   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/db/a6/d053ad1ea659f27a7eac41f2e2ac13a6a0ef4aa4a56f92b4d957bc457f3a/pyhmmer-0.10.0-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,983   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b3/e0/61f95ef5e5ad45640c867726515d8c8e9ce17dd77282d278754fc016f032/pyhmmer-0.10.0-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,984   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/45/96/33fedcdbecfd774ce0a8ef70aa6dc773fb32b0f6f5383d04072d8d75cf2e/pyhmmer-0.10.0-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,984   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b1/88/d84d946a9119cd742eb25a617b7a4910f46cfc59abd679f2fa59aa1809a2/pyhmmer-0.10.0-cp38-cp38-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,985   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f0/d0/56b42decb1fcebe1e8e71fa11d7db73ff6a84e1acea5ef19e185bf2049df/pyhmmer-0.10.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,985   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/64/6d/404cbb2c1e448e3590fc35612a056926ebdb129309f3b9d9f001f4867077/pyhmmer-0.10.0-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,986   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/87/7b/d4a20ea52d8c288ec1510decc75d083a0577313e39b08ab9b0ef8d726967/pyhmmer-0.10.0-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,986   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0a/f3/afd94d57939f15148c1b39770eb60cd33811a6b85d1547ac69e90033d7c0/pyhmmer-0.10.0-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,987   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cc/5f/416485375bbd88f2434fd70cbbc05df4f99c22f791b02e2dba1a9ba9e4b4/pyhmmer-0.10.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,987   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e0/fb/8fca5facaad3ea4a00a67f45ba2e85c4f6db2a4c28110eb42d8282c00727/pyhmmer-0.10.0-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,988   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/71/31/61008b52db065ef37f3cdb4dddf527ac471f92e5fcc753ab520060fb0043/pyhmmer-0.10.0-pp37-pypy37_pp73-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,988   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/12/8a/6a03224be90aeb79e31ea514fb2095c3e2893bcd7a52b3e6b47c472b165e/pyhmmer-0.10.0-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,989   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1d/b1/787f5bd85324529f3116daab59e36f76b8bf0162645881cf8b6b16c95d10/pyhmmer-0.10.0-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,989   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/fd/f9/5ecd9818d759d088ad9bbb4a1bb0112ebdc276937d09649b535b715b4e90/pyhmmer-0.10.0-pp38-pypy38_pp73-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,990   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/17/ce/f770d4b8929f913ef63d7365797f0e6880f25f54097485d1a082be3f7433/pyhmmer-0.10.0-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,990   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/55/4e/6b532964a8c5024cc0711366642fba672ccac714a9326972f4c0c7847f9f/pyhmmer-0.10.0-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,991   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ef/c4/7a84afa9a2fb98934174212b2ab3c4653729e90881569f3f191c3bd97e32/pyhmmer-0.10.0-pp39-pypy39_pp73-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,991   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/43/b5/8372c730e4acddd8124e905723ce50964c92326f8410c46d6a6890d7df34/pyhmmer-0.10.0-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,993   Found link https://files.pythonhosted.org/packages/0a/5e/d60700a6ddeb5f27f778b9a63b1646d75993bb17bdec97fd78530b7931f3/pyhmmer-0.10.0.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.10.0
2023-10-22T14:17:26,993   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/86/a4/a9a9d0aea58a9ac6d5b62b9229c22494736a7bd8b9ec99f9f2eeff2bcd2d/pyhmmer-0.10.1-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,994   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b8/8c/20270c19682aab12e1c0f106df7f587a7081e6c026983523fbe434dadb5b/pyhmmer-0.10.1-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,994   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/67/96/429e4adb7e1c74a1f8f1af5e9fe36ac995f879382dde586f3c633d186f7a/pyhmmer-0.10.1-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,995   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/4d/3d/2c4cf6e26dcf6b212a754bc8c4b0e119e15a4e5901e286383a7bf4f83262/pyhmmer-0.10.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,995   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/aa/0a/06ad97347def43bc336bd21a6afe3851a6c54b08d2b59053c7b38281ebe7/pyhmmer-0.10.1-cp311-cp311-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,996   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e6/81/135b521b67672a2e53a21bfab8f7c1463c26ec03bbc72896c8dbf8554488/pyhmmer-0.10.1-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,996   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/69/a8/0a0c6e0e9483c782b8a593e823ed36be1f8f8ac0204d072c6f1440664970/pyhmmer-0.10.1-cp311-cp311-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,997   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/79/58/c997ac468618b93c100aaf9cbc0b6035e2ade1f73a0508c17ee72593e58a/pyhmmer-0.10.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,997   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a5/66/c61500f28be5397a3bdf75fb9a1984b0cf490966b6cfa54c037bb9e2583d/pyhmmer-0.10.1-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,998   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/86/0e/536241c4eb225fae866fe93bd509771c8fc2226e090dcfb3cd6d6c218b57/pyhmmer-0.10.1-cp36-cp36m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,998   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ad/eb/3733e532ac2ef0890aa52403df1f7c3f9683a71a92358220d4e8f3998b19/pyhmmer-0.10.1-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,999   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a2/a2/de127229fa421985102591d866dd50d057c85df872d042ccdf5163970387/pyhmmer-0.10.1-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:26,999   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1d/35/1c11c21bb246eb45e4a639a094cbaf947312497663a8f32cb034df1c56d4/pyhmmer-0.10.1-cp37-cp37m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,000   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a1/b5/20a97f5bfa1f816211b7e2b10a87a825fb5b2a0a577adebb2d2ce798d916/pyhmmer-0.10.1-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,000   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/23/ad/74a67d57c0f3e40bb833680cb60125c5c65c719e2aafb2a16d4892ed0001/pyhmmer-0.10.1-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,001   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/3f/11/1c91a43c0389a13e667a6ce7536bb1d892ce348995dbe716cb9b0920a3b3/pyhmmer-0.10.1-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,001   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ff/a7/c76810f66b809116a3641250cba24dace8d56b8d94f59c8e62325c398568/pyhmmer-0.10.1-cp38-cp38-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,002   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/3c/3d/febfcb55c3c5c0e60221510642341740cf0370bcca79d3327b5fab65b28a/pyhmmer-0.10.1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,002   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ce/b0/ea62903a9f1fe5668d9b3f3cd97ef220f4f3e55788ca84d29fd08a7c8b4b/pyhmmer-0.10.1-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,003   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/22/2c/c862540c448437eb170fd4c40d92df7d6ee2b95beab44fd2d7912e6b4e44/pyhmmer-0.10.1-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,003   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a5/3c/f7c87ab69ee4c3d50a13dab04b1f5077dcbe71f8eda433dd0ea94d05e063/pyhmmer-0.10.1-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:27,004   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/95/64/3a7a7720a43656c97b33b00e89c9b401caeaea50c84e1a71bab10f7266c1/pyhmmer-0.10.1-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,004   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/bd/6a/ce9590e144dbeb55ed2048758e5c943d10655f26a62563141f3e3010ae19/pyhmmer-0.10.1-pp37-pypy37_pp73-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:27,005   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/55/1b/163e73faa37158549bf83aa67245475c6f81f18b95c5b1396c78015f66c5/pyhmmer-0.10.1-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,006   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/fd/42/0ad1f3f5eb96ad3d5128571f022af3e07fc4f281c20c666abddf0c51c93c/pyhmmer-0.10.1-pp38-pypy38_pp73-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,006   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8f/0d/6102e0e2ceb5dbe8322bf5da0086cb7bbcb1c611ece1fc2d08889a2484ae/pyhmmer-0.10.1-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,007   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ec/54/36c70e77e6413e19ad6d05970b487b0c0a0ebf1a4d8490faad6be41ac854/pyhmmer-0.10.1-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,007   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ff/e0/4c610cc134be7c29179c6a97bf2c240d8e1c72b22c5a1737b2a1c19bdb90/pyhmmer-0.10.1-pp39-pypy39_pp73-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,008   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e8/c3/e0edff10b341aac101ef983908d2f8bb869c9be676679ea8f59815882bac/pyhmmer-0.10.1-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:27,010   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cd/d7/437b2fc607ddcf697605a04df0b04b64a8fa1b0b55db229b7aca4f035969/pyhmmer-0.10.2-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,011   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/44/fc/1e1e14aa7a2ab693090cf1040ed246036f708cc48bf5701c57c296f297b7/pyhmmer-0.10.2-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,011   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/38/d3/831e1ee37974436d6ab742d436fdc6ff2df1fda3e7e97026f196d2593e1f/pyhmmer-0.10.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,012   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0f/e4/459d0124030c15a82159194edb62f5f6a010b10032235e3ffee709baa1fc/pyhmmer-0.10.2-cp311-cp311-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,012   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/08/91/5e810ff9a13d7c393409a168253802ea0f0d7777a0c44924f7fa82085e1a/pyhmmer-0.10.2-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,013   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a0/fb/b0b3453d6b28ff53a5d9f51e5e8ab2844fef60f674e6c1d65a053077a9bc/pyhmmer-0.10.2-cp311-cp311-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,013   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5a/87/b36fa0648ded05391f83634af6213c14ff17f939a0771a6dfd83782c8eb2/pyhmmer-0.10.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,014   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d5/1e/662c9f9261b81cd19c79536f5e5a9cde1ccc44e084b831b5924ecd06da4b/pyhmmer-0.10.2-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,014   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/14/c2/fd23b275a58eb1c78715d35c91d99299ed5cca478ccea797fc225ec2d13f/pyhmmer-0.10.2-cp36-cp36m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,015   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e3/c4/075f1471df9a308e71eb47d9b67eb906765cfc31613de910fd5a7729f6fc/pyhmmer-0.10.2-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,015   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9c/ac/e52c9389b4c55232e21c2a780dff1b7f015d55e44f52b20cf9c3750af94f/pyhmmer-0.10.2-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,016   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/57/4c/cd94d4d44ac7bcaa0441c43b497a12e245bc193bdd7e147c1052cd41f72e/pyhmmer-0.10.2-cp37-cp37m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,016   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/da/0c/c9f8d62fe5bda81f38b0c72d84086b40be4b0a136a40add396a0973392d0/pyhmmer-0.10.2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,017   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ed/b9/d79db5cf812844b04d98038e6810d093280a46a1f77e75499110374b2923/pyhmmer-0.10.2-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,017   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/92/9c/ad5030125df8c305a9751ef243509a981f8d994fb35b3cdce754391e33b7/pyhmmer-0.10.2-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,018   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/90/65/4064f6b16fbb6fbc35eebab09b2ffd176bbdff7d8d6e0b4e56a8f6769648/pyhmmer-0.10.2-cp38-cp38-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,018   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9b/e2/3a3a4592324e1a19b8cdecf975205d4349d59a4bf46919cb088ee289ac40/pyhmmer-0.10.2-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,019   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/76/e2/4dee973513424feec48066ef207ae699509f234e0399c6a7cf706fa41245/pyhmmer-0.10.2-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,019   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/fa/5f/076e18530a98a4794d72f061f09aeec598a29fc265316e99d62f0d1f604e/pyhmmer-0.10.2-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,020   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/36/25/6915d1f146edf0ff74781d3bb8c1647cb94985028a6748cf24f46715a89e/pyhmmer-0.10.2-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,020   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/78/03/bacf935a39087492a87510664ba04a3cbec2181299049c723b2f248bb1ad/pyhmmer-0.10.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,021   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/24/da/62855a8422e98a83d3c1dbc04413826424e8e423f91265260fa56020f5b7/pyhmmer-0.10.2-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,021   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5a/53/246a8e4591ab76bff76f58018bddca4b050ff1f82279083ce4aed6750d89/pyhmmer-0.10.2-pp37-pypy37_pp73-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,022   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/47/a3/7f05801ed46cbcf805ae42a2a55d98b64fdd8295ebacbcbb3b1a7c8d35db/pyhmmer-0.10.2-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,022   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/83/a9/b9749543dd1845839f3aa1cacac9ff19eac8636c7c8411242631afa1d5f6/pyhmmer-0.10.2-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,023   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c9/66/bfc2e4c80e1681158948d466202a30ab7768494adacffa9697074a4cc7c1/pyhmmer-0.10.2-pp38-pypy38_pp73-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,023   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/43/63/073760d0690bddaf5503fa4da4fd2584572b316553f7933ac5aaf5c3ddf5/pyhmmer-0.10.2-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,024   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/60/f8/fef1c893c5fef72b50472ca932c4f81ca97150c12ce309c0a4125fd076a5/pyhmmer-0.10.2-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,024   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e3/e8/3fa6f94382093941d7bbaa194e2a8558d3d4a8078e03553104472dde89c3/pyhmmer-0.10.2-pp39-pypy39_pp73-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,025   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/00/f8/07c56b73bad1406945aa8b47ac82fad065da971cd24678b1ef09708422fe/pyhmmer-0.10.2-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:27,027   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/43/58/d417b6d969def05dcba326a6992ec083e6aed0567d2976095659b6f3e1a6/pyhmmer-0.10.3-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,028   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/47/6e/3c1550413787f0b7407d71ee30b7b6d122919f538651d3ff7ea4f11001cb/pyhmmer-0.10.3-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,028   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/81/eb/b3ef030de2b633b16ee8712fd7459ceee3b1fe010a62c5a6b11998802f7f/pyhmmer-0.10.3-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,029   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/fa/0d/f026682e0881e53606d0ac3c4e071c699f108aa557ecdaf1e80818e837d3/pyhmmer-0.10.3-cp311-cp311-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,029   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5d/d9/1827fde2246ac087aefd2b82fd67942971771c13043d49519af144e1eba3/pyhmmer-0.10.3-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,030   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2d/78/31bab4738f5af443510c5e4dfe91db77807a26d12618c84f0e3cd4ae07a4/pyhmmer-0.10.3-cp311-cp311-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,030   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ad/f1/4fcabbc3d0758da34a7bf9d632ef7f5a0b5f6bfa6c253aa736f91ff92edc/pyhmmer-0.10.3-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,031   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b6/67/7e23e0838a3870e0b4822077142a3c53b2f8e1ef62ae05011b1a11dbad16/pyhmmer-0.10.3-cp312-cp312-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,031   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/95/45/945adb307b6765b64379a168caf0ba90af39658dd762f986ddfe170f0348/pyhmmer-0.10.3-cp312-cp312-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T14:17:27,032   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/df/f3/14bc39619681f941965d260a6e70cfd97d8e8d77b93274abe459e8c89489/pyhmmer-0.10.3-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,033   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/fb/db/948c2da397544a8eaec3a7bb610463b60bdaa8581d13ccf14204093b2ac3/pyhmmer-0.10.3-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,033   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/dc/fd/d396b227d97583d0907be13e38996d59c6e201273a5a8e59dcf26792ef44/pyhmmer-0.10.3-cp36-cp36m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,034   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/61/ec/b9970ac5fb5a8107ec0ff2b1f26967a9f38a619644b2d4d1f55d09594be6/pyhmmer-0.10.3-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,034   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a6/a2/3d77d36f78245b10175df5b33d4b1d37193dbbb98cf8e7ecc87d35c232a1/pyhmmer-0.10.3-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,035   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/94/65/e16e47a9bd69a6064172dc6d4297fe893dd062ae9a405a6a912b1f9500f1/pyhmmer-0.10.3-cp37-cp37m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,035   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/49/be/cc28eee47deca0e42809024092b8166160b592d3a1c3e2047845ef750ad4/pyhmmer-0.10.3-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,035   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6c/55/509cc9eee61d9b081347489ba5989134b51e4d3b572b5ac98d4874100928/pyhmmer-0.10.3-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,036   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b9/2f/474e98ad103b5df87bcbb02cd0197b40526053030ad81dc945678e5f2662/pyhmmer-0.10.3-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,036   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/55/8a/297998af3106823ae51b80a4775bb2da00f40d9218d416c758bfe25fcc23/pyhmmer-0.10.3-cp38-cp38-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,037   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/06/e7/2e9c37e221655241dbf29c3c9efc5062de2fea8d7b2e133839ef65a57540/pyhmmer-0.10.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,037   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d2/07/2df2c12929b741102ff50f05ac5ae4470ff36b7d142f9107820e2b9a96fa/pyhmmer-0.10.3-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,038   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/03/de/56efb8c0397dc57ef895ea7c02926bd52edeb17a2c9941a64f0aae822ebb/pyhmmer-0.10.3-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,038   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5a/a7/e3dbd35c934d5f0cc4d951cef4bc602cdd60c68ae9acb5d370123f98f06c/pyhmmer-0.10.3-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,039   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ec/47/ea515d92e2a3ff4f0b30b811374670af18f5c31a533e1a0152b2bb18f2ad/pyhmmer-0.10.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,039   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/73/da/46bb8ae6e94a0137f4811c2ca9dd8e98873c3b2ff45987e694a9ce56f6db/pyhmmer-0.10.3-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,040   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f4/10/f9cfdcdab0c8e558d12ca5538a529feb94fd84d4f49901ff2a34058e1257/pyhmmer-0.10.3-pp37-pypy37_pp73-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,040   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/51/0f/bcabc95f2d8610a874efd5682bd2c0beeae94f32b56ba61ce6aff84dd732/pyhmmer-0.10.3-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,041   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f0/79/7b10875f3d8b19091bd539c8c55d9ec2141b9d5a32e68e34911d71a65c4a/pyhmmer-0.10.3-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,041   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/4d/eb/d3797944a040927ea33d75f42cf8f2a88d85351c8cebdc1b276865456778/pyhmmer-0.10.3-pp38-pypy38_pp73-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,042   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c0/b8/53ff2ce13b4ec50f3d4e2bbc58a146aeac2ea16941eece5bd7d2191e8c07/pyhmmer-0.10.3-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,042   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0a/cc/c4f857cb6337eeb61def8264147637b3a60c12d9c1514fc5b8326d680a66/pyhmmer-0.10.3-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,043   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6d/79/0a0836573fa481bd0c611b2a05203ccf999046ed91441189b26d0390595c/pyhmmer-0.10.3-pp39-pypy39_pp73-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,043   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/fb/1d/e14a5d828378f9ada935608e47836a2b58c08d5f52dc92a1fac3da135c0d/pyhmmer-0.10.3-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,045   Found link https://files.pythonhosted.org/packages/ff/a7/21a20c1297f7d6975092aa13024cf349f44c83b266ad4965e4e34cbc8166/pyhmmer-0.10.3.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.10.3
2023-10-22T14:17:27,046 Fetching project page and analyzing links: https://www.piwheels.org/simple/pyhmmer/
2023-10-22T14:17:27,047 Getting page https://www.piwheels.org/simple/pyhmmer/
2023-10-22T14:17:27,049 Found index url https://www.piwheels.org/simple/
2023-10-22T14:17:27,161 Fetched page https://www.piwheels.org/simple/pyhmmer/ as text/html
2023-10-22T14:17:27,178   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.3-cp311-cp311-linux_armv7l.whl#sha256=b9211b42cab8b22f0db51d215afc34ee1dc797a653ca5862d538c9f28819f3a6 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,179   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.3-cp311-cp311-linux_armv6l.whl#sha256=b9211b42cab8b22f0db51d215afc34ee1dc797a653ca5862d538c9f28819f3a6 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,180   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.2-cp311-cp311-linux_armv7l.whl#sha256=d6c200cdc4dc44ba61ccf8cc8776efc2824df2e7f6752b5d3ea0112ef9ef3580 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,180   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.2-cp311-cp311-linux_armv6l.whl#sha256=d6c200cdc4dc44ba61ccf8cc8776efc2824df2e7f6752b5d3ea0112ef9ef3580 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,181   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.2-cp39-cp39-linux_armv7l.whl#sha256=5b5677b3de58a0cf905f4362f89271ca9ffe6d827c6566a31d43fb1f9954d89b (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,181   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.2-cp39-cp39-linux_armv6l.whl#sha256=5b5677b3de58a0cf905f4362f89271ca9ffe6d827c6566a31d43fb1f9954d89b (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,182   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.2-cp37-cp37m-linux_armv7l.whl#sha256=fc130f57db7a3d251396d47c0b65f851a8649efe849c1b5fe6edf1d7584fe510 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,182   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.2-cp37-cp37m-linux_armv6l.whl#sha256=fc130f57db7a3d251396d47c0b65f851a8649efe849c1b5fe6edf1d7584fe510 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,183   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.1-cp311-cp311-linux_armv7l.whl#sha256=21f20a59454f3af348f77dfae127be4dc4659d89fb2a5b8d215d0800401baab9 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,183   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.1-cp311-cp311-linux_armv6l.whl#sha256=21f20a59454f3af348f77dfae127be4dc4659d89fb2a5b8d215d0800401baab9 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,184   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.1-cp39-cp39-linux_armv7l.whl#sha256=080392c3128396a3e3807316deb771622a30cfd15912daa4618ccc307f573060 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,184   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.1-cp39-cp39-linux_armv6l.whl#sha256=080392c3128396a3e3807316deb771622a30cfd15912daa4618ccc307f573060 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,185   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.1-cp37-cp37m-linux_armv7l.whl#sha256=f16771752520e098668f0a316f854c36ed2b95b151235a95bda0c510b2925627 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,185   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.1-cp37-cp37m-linux_armv6l.whl#sha256=f16771752520e098668f0a316f854c36ed2b95b151235a95bda0c510b2925627 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,186   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.0-cp311-cp311-linux_armv7l.whl#sha256=3edd051ab8fc4d4193e94ec5c7ed0aa67ab70b021d3941112113fed2e5b9d771 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,186   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.0-cp311-cp311-linux_armv6l.whl#sha256=3edd051ab8fc4d4193e94ec5c7ed0aa67ab70b021d3941112113fed2e5b9d771 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,187   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.0-cp39-cp39-linux_armv7l.whl#sha256=bc599f2682ac5c067c98071ddc2b813b7f322ee725995f783a9fa338baf42fca (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,187   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.0-cp39-cp39-linux_armv6l.whl#sha256=bc599f2682ac5c067c98071ddc2b813b7f322ee725995f783a9fa338baf42fca (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,188   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.0-cp37-cp37m-linux_armv7l.whl#sha256=d3dccbcc605d6187a81a48ed89b005185e14e946e16b01cc495a93a4a4e4893d (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,188   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.0-cp37-cp37m-linux_armv6l.whl#sha256=d3dccbcc605d6187a81a48ed89b005185e14e946e16b01cc495a93a4a4e4893d (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T14:17:27,189 Skipping link: not a file: https://www.piwheels.org/simple/pyhmmer/
2023-10-22T14:17:27,189 Skipping link: not a file: https://pypi.org/simple/pyhmmer/
2023-10-22T14:17:27,241 Given no hashes to check 1 links for project 'pyhmmer': discarding no candidates
2023-10-22T14:17:27,272 Collecting pyhmmer==0.10.3
2023-10-22T14:17:27,277   Created temporary directory: /tmp/pip-unpack-65qnl3nx
2023-10-22T14:17:27,378   Downloading pyhmmer-0.10.3.tar.gz (11.1 MB)
2023-10-22T14:17:36,925   Added pyhmmer==0.10.3 from https://files.pythonhosted.org/packages/ff/a7/21a20c1297f7d6975092aa13024cf349f44c83b266ad4965e4e34cbc8166/pyhmmer-0.10.3.tar.gz to build tracker '/tmp/pip-build-tracker-picegkmz'
2023-10-22T14:17:36,935   Created temporary directory: /tmp/pip-build-env-x7faexbw
2023-10-22T14:17:36,958   Installing build dependencies: started
2023-10-22T14:17:36,961   Running command pip subprocess to install build dependencies
2023-10-22T14:17:39,922   Using pip 23.3 from /home/piwheels/.local/lib/python3.7/site-packages/pip (python 3.7)
2023-10-22T14:17:41,141   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-10-22T14:17:42,921     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/b8/49/b3b29c52b09075fb77f69309763a563b4054d5808a3f3b95df3a62ef3d3f/setuptools-68.1.0-py3-none-any.whl (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8)
2023-10-22T14:17:42,924     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/83/b0/18310b45f6eec3757c0554dbc1e03f2f7685c8a87831aea6adc1276faacc/setuptools-68.1.0.tar.gz (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8)
2023-10-22T14:17:42,927     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/4f/ab/0bcfebdfc3bfa8554b2b2c97a555569c4c1ebc74ea288741ea8326c51906/setuptools-68.1.2-py3-none-any.whl (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8)
2023-10-22T14:17:42,930     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/19/20/d8dd9d8becaf3e2d6fdc17cc41870d5ada5ceda518996cf5968c2ca71bd8/setuptools-68.1.2.tar.gz (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8)
2023-10-22T14:17:42,933     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/82/3b/0715493246eb08e93506f4da0efe1d05a3c9d9ac3b76e97cc362890e6adf/setuptools-68.2.0-py3-none-any.whl (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8)
2023-10-22T14:17:42,936     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/ac/e0/4ccbb616e5f30d3595fa44ccc66ba5ac38e68885bcd888916d39f8ba480a/setuptools-68.2.0.tar.gz (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8)
2023-10-22T14:17:42,939     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/95/79/6b47c6a872b40743a480687dc0c79ffb4202710789f3e4d54a84fff8b550/setuptools-68.2.1-py3-none-any.whl (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8)
2023-10-22T14:17:42,942     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/e9/37/c6a6eb1ebeea919e4f394d811f234322d8a99eb58d5ee0f6089dbf06c488/setuptools-68.2.1.tar.gz (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8)
2023-10-22T14:17:42,945     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/bb/26/7945080113158354380a12ce26873dd6c1ebd88d47f5bc24e2c5bb38c16a/setuptools-68.2.2-py3-none-any.whl (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8)
2023-10-22T14:17:42,948     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/ef/cc/93f7213b2ab5ed383f98ce8020e632ef256b406b8569606c3f160ed8e1c9/setuptools-68.2.2.tar.gz (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8)
2023-10-22T14:17:43,489     Link requires a different Python (3.7.3 not in: '>=3.8'): https://www.piwheels.org/simple/setuptools/setuptools-68.2.2-py3-none-any.whl#sha256=f0df733ea47683814b07dbe33306d759b45214648a1b5f03bdf033f43f653193 (from https://www.piwheels.org/simple/setuptools/) (requires-python:>=3.8)
2023-10-22T14:17:43,492     Link requires a different Python (3.7.3 not in: '>=3.8'): https://www.piwheels.org/simple/setuptools/setuptools-68.2.1-py3-none-any.whl#sha256=de31ae572b523d234b51ec033bb5a28a4636b450819ef59ff98866b0ea1283d5 (from https://www.piwheels.org/simple/setuptools/) (requires-python:>=3.8)
2023-10-22T14:17:43,495     Link requires a different Python (3.7.3 not in: '>=3.8'): https://www.piwheels.org/simple/setuptools/setuptools-68.2.0-py3-none-any.whl#sha256=21c44bd2b10d2e118de5c29f18cfc80305dcc5587cef781523ae9e08376d222a (from https://www.piwheels.org/simple/setuptools/) (requires-python:>=3.8)
2023-10-22T14:17:43,498     Link requires a different Python (3.7.3 not in: '>=3.8'): https://www.piwheels.org/simple/setuptools/setuptools-68.1.2-py3-none-any.whl#sha256=9e076b8e4f5535e0e67305a15e9eb418006751b9bf0bb8d0a367d09ad0adf3a1 (from https://www.piwheels.org/simple/setuptools/) (requires-python:>=3.8)
2023-10-22T14:17:43,501     Link requires a different Python (3.7.3 not in: '>=3.8'): https://www.piwheels.org/simple/setuptools/setuptools-68.1.0-py3-none-any.whl#sha256=0637a8df7f9d79ffffa7010fdd3db5ca70836acda6994af5f7edb9524838aa23 (from https://www.piwheels.org/simple/setuptools/) (requires-python:>=3.8)
2023-10-22T14:17:44,828   Collecting setuptools>=46.4
2023-10-22T14:17:44,861     Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.0.0-py3-none-any.whl (804 kB)
2023-10-22T14:17:48,154   Collecting cython~=3.0
2023-10-22T14:17:48,190     Using cached https://www.piwheels.org/simple/cython/Cython-3.0.4-cp37-cp37m-linux_armv7l.whl (4.4 MB)
2023-10-22T14:17:53,488   Installing collected packages: setuptools, cython
2023-10-22T14:18:03,780     Creating /tmp/pip-build-env-x7faexbw/overlay/bin
2023-10-22T14:18:03,785     changing mode of /tmp/pip-build-env-x7faexbw/overlay/bin/cygdb to 755
2023-10-22T14:18:03,789     changing mode of /tmp/pip-build-env-x7faexbw/overlay/bin/cython to 755
2023-10-22T14:18:03,794     changing mode of /tmp/pip-build-env-x7faexbw/overlay/bin/cythonize to 755
2023-10-22T14:18:03,841   Successfully installed cython-3.0.4 setuptools-68.0.0
2023-10-22T14:18:04,291   WARNING: There was an error checking the latest version of pip.
2023-10-22T14:18:04,865   Installing build dependencies: finished with status 'done'
2023-10-22T14:18:04,876   Getting requirements to build wheel: started
2023-10-22T14:18:04,879   Running command Getting requirements to build wheel
2023-10-22T14:18:07,007   Getting requirements to build wheel: finished with status 'done'
2023-10-22T14:18:07,044   Installing backend dependencies: started
2023-10-22T14:18:07,046   Running command pip subprocess to install backend dependencies
2023-10-22T14:18:09,947   Using pip 23.3 from /home/piwheels/.local/lib/python3.7/site-packages/pip (python 3.7)
2023-10-22T14:18:11,206   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-10-22T14:18:11,963   Collecting wheel
2023-10-22T14:18:11,995     Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB)
2023-10-22T14:18:16,167   Installing collected packages: wheel
2023-10-22T14:18:16,620     Creating /tmp/pip-build-env-x7faexbw/normal/bin
2023-10-22T14:18:16,624     changing mode of /tmp/pip-build-env-x7faexbw/normal/bin/wheel to 755
2023-10-22T14:18:16,651   Successfully installed wheel-0.41.2
2023-10-22T14:18:17,106   WARNING: There was an error checking the latest version of pip.
2023-10-22T14:18:17,492   Installing backend dependencies: finished with status 'done'
2023-10-22T14:18:17,498   Created temporary directory: /tmp/pip-modern-metadata-869jemn7
2023-10-22T14:18:17,504   Preparing metadata (pyproject.toml): started
2023-10-22T14:18:17,506   Running command Preparing metadata (pyproject.toml)
2023-10-22T14:18:19,503   running dist_info
2023-10-22T14:18:19,530   creating /tmp/pip-modern-metadata-869jemn7/pyhmmer.egg-info
2023-10-22T14:18:19,540   writing /tmp/pip-modern-metadata-869jemn7/pyhmmer.egg-info/PKG-INFO
2023-10-22T14:18:19,547   writing dependency_links to /tmp/pip-modern-metadata-869jemn7/pyhmmer.egg-info/dependency_links.txt
2023-10-22T14:18:19,551   writing requirements to /tmp/pip-modern-metadata-869jemn7/pyhmmer.egg-info/requires.txt
2023-10-22T14:18:19,553   writing top-level names to /tmp/pip-modern-metadata-869jemn7/pyhmmer.egg-info/top_level.txt
2023-10-22T14:18:19,556   writing manifest file '/tmp/pip-modern-metadata-869jemn7/pyhmmer.egg-info/SOURCES.txt'
2023-10-22T14:18:19,671   reading manifest file '/tmp/pip-modern-metadata-869jemn7/pyhmmer.egg-info/SOURCES.txt'
2023-10-22T14:18:19,675   reading manifest template 'MANIFEST.in'
2023-10-22T14:18:20,986   warning: no previously-included files matching '*.ai' found under directory 'vendor/hmmer'
2023-10-22T14:18:20,992   warning: no previously-included files matching '*.pl' found under directory 'vendor'
2023-10-22T14:18:20,996   no previously-included directories found matching 'vendor/easel/demotic'
2023-10-22T14:18:21,000   no previously-included directories found matching 'vendor/easel/documentation'
2023-10-22T14:18:21,004   no previously-included directories found matching 'vendor/easel/esl_msa_testfiles'
2023-10-22T14:18:21,008   no previously-included directories found matching 'vendor/easel/miniapps'
2023-10-22T14:18:21,012   no previously-included directories found matching 'vendor/easel/testsuite'
2023-10-22T14:18:21,015   no previously-included directories found matching 'vendor/hmmer/autobuild'
2023-10-22T14:18:21,020   no previously-included directories found matching 'vendor/hmmer/documentation'
2023-10-22T14:18:21,023   no previously-included directories found matching 'vendor/hmmer/contrib'
2023-10-22T14:18:21,027   no previously-included directories found matching 'vendor/hmmer/profmark'
2023-10-22T14:18:21,031   no previously-included directories found matching 'vendor/hmmer/testsuite'
2023-10-22T14:18:21,035   no previously-included directories found matching 'vendor/hmmer/test-speed'
2023-10-22T14:18:21,039   no previously-included directories found matching 'vendor/hmmer/tutorial'
2023-10-22T14:18:21,040   adding license file 'COPYING'
2023-10-22T14:18:21,117   writing manifest file '/tmp/pip-modern-metadata-869jemn7/pyhmmer.egg-info/SOURCES.txt'
2023-10-22T14:18:21,122   creating '/tmp/pip-modern-metadata-869jemn7/pyhmmer-0.10.3.dist-info'
2023-10-22T14:18:21,488   Preparing metadata (pyproject.toml): finished with status 'done'
2023-10-22T14:18:21,505   Source in /tmp/pip-wheel-1us7h8ol/pyhmmer_5b60b33fc77d466c88bb3ac5ae961139 has version 0.10.3, which satisfies requirement pyhmmer==0.10.3 from https://files.pythonhosted.org/packages/ff/a7/21a20c1297f7d6975092aa13024cf349f44c83b266ad4965e4e34cbc8166/pyhmmer-0.10.3.tar.gz
2023-10-22T14:18:21,508   Removed pyhmmer==0.10.3 from https://files.pythonhosted.org/packages/ff/a7/21a20c1297f7d6975092aa13024cf349f44c83b266ad4965e4e34cbc8166/pyhmmer-0.10.3.tar.gz from build tracker '/tmp/pip-build-tracker-picegkmz'
2023-10-22T14:18:21,526 Created temporary directory: /tmp/pip-unpack-swb32yd6
2023-10-22T14:18:21,528 Created temporary directory: /tmp/pip-unpack-ef6agzok
2023-10-22T14:18:21,540 Building wheels for collected packages: pyhmmer
2023-10-22T14:18:21,549   Created temporary directory: /tmp/pip-wheel-nmacn_y3
2023-10-22T14:18:21,550   Destination directory: /tmp/pip-wheel-nmacn_y3
2023-10-22T14:18:21,555   Building wheel for pyhmmer (pyproject.toml): started
2023-10-22T14:18:21,557   Running command Building wheel for pyhmmer (pyproject.toml)
2023-10-22T14:18:23,548   running bdist_wheel
2023-10-22T14:18:23,607   running build
2023-10-22T14:18:23,607   running build_py
2023-10-22T14:18:23,625   creating build
2023-10-22T14:18:23,626   creating build/lib.linux-armv7l-cpython-37
2023-10-22T14:18:23,628   creating build/lib.linux-armv7l-cpython-37/pyhmmer
2023-10-22T14:18:23,630   copying pyhmmer/hmmer.py -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-10-22T14:18:23,638   copying pyhmmer/utils.py -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-10-22T14:18:23,641   copying pyhmmer/__init__.py -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-10-22T14:18:23,646   creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests
2023-10-22T14:18:23,647   copying pyhmmer/tests/test_hmmer.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests
2023-10-22T14:18:23,653   copying pyhmmer/tests/test_errors.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests
2023-10-22T14:18:23,656   copying pyhmmer/tests/utils.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests
2023-10-22T14:18:23,660   copying pyhmmer/tests/__init__.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests
2023-10-22T14:18:23,664   copying pyhmmer/tests/test_doctest.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests
2023-10-22T14:18:23,670   creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel
2023-10-22T14:18:23,672   copying pyhmmer/tests/test_easel/test_matrix.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel
2023-10-22T14:18:23,677   copying pyhmmer/tests/test_easel/test_msa.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel
2023-10-22T14:18:23,681   copying pyhmmer/tests/test_easel/test_sequence.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel
2023-10-22T14:18:23,685   copying pyhmmer/tests/test_easel/test_sequencefile.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel
2023-10-22T14:18:23,690   copying pyhmmer/tests/test_easel/test_gencode.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel
2023-10-22T14:18:23,693   copying pyhmmer/tests/test_easel/test_vector.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel
2023-10-22T14:18:23,698   copying pyhmmer/tests/test_easel/__init__.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel
2023-10-22T14:18:23,702   copying pyhmmer/tests/test_easel/test_alphabet.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel
2023-10-22T14:18:23,705   copying pyhmmer/tests/test_easel/test_bitfield.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel
2023-10-22T14:18:23,709   copying pyhmmer/tests/test_easel/test_keyhash.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel
2023-10-22T14:18:23,712   copying pyhmmer/tests/test_easel/test_msafile.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel
2023-10-22T14:18:23,717   copying pyhmmer/tests/test_easel/test_block.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel
2023-10-22T14:18:23,721   copying pyhmmer/tests/test_easel/test_ssi.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel
2023-10-22T14:18:23,725   copying pyhmmer/tests/test_easel/test_randomness.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel
2023-10-22T14:18:23,730   creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7
2023-10-22T14:18:23,732   copying pyhmmer/tests/test_plan7/test_background.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7
2023-10-22T14:18:23,736   copying pyhmmer/tests/test_plan7/test_hit.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7
2023-10-22T14:18:23,740   copying pyhmmer/tests/test_plan7/test_hmm.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7
2023-10-22T14:18:23,744   copying pyhmmer/tests/test_plan7/test_traces.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7
2023-10-22T14:18:23,748   copying pyhmmer/tests/test_plan7/test_builder.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7
2023-10-22T14:18:23,752   copying pyhmmer/tests/test_plan7/test_optimizedprofile.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7
2023-10-22T14:18:23,756   copying pyhmmer/tests/test_plan7/test_tophits.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7
2023-10-22T14:18:23,761   copying pyhmmer/tests/test_plan7/test_pipeline.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7
2023-10-22T14:18:23,765   copying pyhmmer/tests/test_plan7/test_tracealigner.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7
2023-10-22T14:18:23,769   copying pyhmmer/tests/test_plan7/__init__.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7
2023-10-22T14:18:23,772   copying pyhmmer/tests/test_plan7/test_profile.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7
2023-10-22T14:18:23,776   copying pyhmmer/tests/test_plan7/test_hmmfile.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7
2023-10-22T14:18:23,780   copying pyhmmer/tests/test_plan7/test_block.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7
2023-10-22T14:18:23,784   running egg_info
2023-10-22T14:18:23,794   writing pyhmmer.egg-info/PKG-INFO
2023-10-22T14:18:23,799   writing dependency_links to pyhmmer.egg-info/dependency_links.txt
2023-10-22T14:18:23,803   writing requirements to pyhmmer.egg-info/requires.txt
2023-10-22T14:18:23,805   writing top-level names to pyhmmer.egg-info/top_level.txt
2023-10-22T14:18:23,844   reading manifest file 'pyhmmer.egg-info/SOURCES.txt'
2023-10-22T14:18:23,891   reading manifest template 'MANIFEST.in'
2023-10-22T14:18:25,144   warning: no previously-included files matching '*.ai' found under directory 'vendor/hmmer'
2023-10-22T14:18:25,152   warning: no previously-included files matching '*.pl' found under directory 'vendor'
2023-10-22T14:18:25,158   no previously-included directories found matching 'vendor/easel/demotic'
2023-10-22T14:18:25,164   no previously-included directories found matching 'vendor/easel/documentation'
2023-10-22T14:18:25,170   no previously-included directories found matching 'vendor/easel/esl_msa_testfiles'
2023-10-22T14:18:25,176   no previously-included directories found matching 'vendor/easel/miniapps'
2023-10-22T14:18:25,182   no previously-included directories found matching 'vendor/easel/testsuite'
2023-10-22T14:18:25,188   no previously-included directories found matching 'vendor/hmmer/autobuild'
2023-10-22T14:18:25,194   no previously-included directories found matching 'vendor/hmmer/documentation'
2023-10-22T14:18:25,200   no previously-included directories found matching 'vendor/hmmer/contrib'
2023-10-22T14:18:25,205   no previously-included directories found matching 'vendor/hmmer/profmark'
2023-10-22T14:18:25,211   no previously-included directories found matching 'vendor/hmmer/testsuite'
2023-10-22T14:18:25,217   no previously-included directories found matching 'vendor/hmmer/test-speed'
2023-10-22T14:18:25,223   no previously-included directories found matching 'vendor/hmmer/tutorial'
2023-10-22T14:18:25,224   adding license file 'COPYING'
2023-10-22T14:18:25,331   writing manifest file 'pyhmmer.egg-info/SOURCES.txt'
2023-10-22T14:18:25,353   /tmp/pip-build-env-x7faexbw/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pyhmmer.fileobj' is absent from the `packages` configuration.
2023-10-22T14:18:25,354   !!

2023-10-22T14:18:25,355           ********************************************************************************
2023-10-22T14:18:25,355           ############################
2023-10-22T14:18:25,355           # Package would be ignored #
2023-10-22T14:18:25,356           ############################
2023-10-22T14:18:25,356           Python recognizes 'pyhmmer.fileobj' as an importable package[^1],
2023-10-22T14:18:25,356           but it is absent from setuptools' `packages` configuration.

2023-10-22T14:18:25,357           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-22T14:18:25,357           package, please make sure that 'pyhmmer.fileobj' is explicitly added
2023-10-22T14:18:25,357           to the `packages` configuration field.

2023-10-22T14:18:25,358           Alternatively, you can also rely on setuptools' discovery methods
2023-10-22T14:18:25,358           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-22T14:18:25,359           instead of `find_packages(...)`/`find:`).

2023-10-22T14:18:25,359           You can read more about "package discovery" on setuptools documentation page:

2023-10-22T14:18:25,360           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-22T14:18:25,360           If you don't want 'pyhmmer.fileobj' to be distributed and are
2023-10-22T14:18:25,361           already explicitly excluding 'pyhmmer.fileobj' via
2023-10-22T14:18:25,361           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-22T14:18:25,361           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-22T14:18:25,361           combination with a more fine grained `package-data` configuration.

2023-10-22T14:18:25,362           You can read more about "package data files" on setuptools documentation page:

2023-10-22T14:18:25,363           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-22T14:18:25,363           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-22T14:18:25,364                 even if it does not contain any `.py` files.
2023-10-22T14:18:25,364                 On the other hand, currently there is no concept of package data
2023-10-22T14:18:25,364                 directory, all directories are treated like packages.
2023-10-22T14:18:25,365           ********************************************************************************

2023-10-22T14:18:25,365   !!
2023-10-22T14:18:25,366     check.warn(importable)
2023-10-22T14:18:25,366   /tmp/pip-build-env-x7faexbw/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pyhmmer.reexports' is absent from the `packages` configuration.
2023-10-22T14:18:25,366   !!

2023-10-22T14:18:25,367           ********************************************************************************
2023-10-22T14:18:25,367           ############################
2023-10-22T14:18:25,367           # Package would be ignored #
2023-10-22T14:18:25,368           ############################
2023-10-22T14:18:25,368           Python recognizes 'pyhmmer.reexports' as an importable package[^1],
2023-10-22T14:18:25,368           but it is absent from setuptools' `packages` configuration.

2023-10-22T14:18:25,369           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-22T14:18:25,369           package, please make sure that 'pyhmmer.reexports' is explicitly added
2023-10-22T14:18:25,369           to the `packages` configuration field.

2023-10-22T14:18:25,370           Alternatively, you can also rely on setuptools' discovery methods
2023-10-22T14:18:25,370           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-22T14:18:25,370           instead of `find_packages(...)`/`find:`).

2023-10-22T14:18:25,371           You can read more about "package discovery" on setuptools documentation page:

2023-10-22T14:18:25,372           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-22T14:18:25,372           If you don't want 'pyhmmer.reexports' to be distributed and are
2023-10-22T14:18:25,372           already explicitly excluding 'pyhmmer.reexports' via
2023-10-22T14:18:25,373           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-22T14:18:25,373           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-22T14:18:25,373           combination with a more fine grained `package-data` configuration.

2023-10-22T14:18:25,374           You can read more about "package data files" on setuptools documentation page:

2023-10-22T14:18:25,374           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-22T14:18:25,375           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-22T14:18:25,376                 even if it does not contain any `.py` files.
2023-10-22T14:18:25,376                 On the other hand, currently there is no concept of package data
2023-10-22T14:18:25,376                 directory, all directories are treated like packages.
2023-10-22T14:18:25,376           ********************************************************************************

2023-10-22T14:18:25,377   !!
2023-10-22T14:18:25,377     check.warn(importable)
2023-10-22T14:18:25,378   /tmp/pip-build-env-x7faexbw/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pyhmmer.tests.data' is absent from the `packages` configuration.
2023-10-22T14:18:25,378   !!

2023-10-22T14:18:25,378           ********************************************************************************
2023-10-22T14:18:25,379           ############################
2023-10-22T14:18:25,379           # Package would be ignored #
2023-10-22T14:18:25,379           ############################
2023-10-22T14:18:25,379           Python recognizes 'pyhmmer.tests.data' as an importable package[^1],
2023-10-22T14:18:25,380           but it is absent from setuptools' `packages` configuration.

2023-10-22T14:18:25,380           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-22T14:18:25,381           package, please make sure that 'pyhmmer.tests.data' is explicitly added
2023-10-22T14:18:25,381           to the `packages` configuration field.

2023-10-22T14:18:25,381           Alternatively, you can also rely on setuptools' discovery methods
2023-10-22T14:18:25,382           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-22T14:18:25,382           instead of `find_packages(...)`/`find:`).

2023-10-22T14:18:25,383           You can read more about "package discovery" on setuptools documentation page:

2023-10-22T14:18:25,383           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-22T14:18:25,384           If you don't want 'pyhmmer.tests.data' to be distributed and are
2023-10-22T14:18:25,384           already explicitly excluding 'pyhmmer.tests.data' via
2023-10-22T14:18:25,384           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-22T14:18:25,385           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-22T14:18:25,385           combination with a more fine grained `package-data` configuration.

2023-10-22T14:18:25,385           You can read more about "package data files" on setuptools documentation page:

2023-10-22T14:18:25,386           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-22T14:18:25,387           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-22T14:18:25,387                 even if it does not contain any `.py` files.
2023-10-22T14:18:25,387                 On the other hand, currently there is no concept of package data
2023-10-22T14:18:25,388                 directory, all directories are treated like packages.
2023-10-22T14:18:25,388           ********************************************************************************

2023-10-22T14:18:25,388   !!
2023-10-22T14:18:25,389     check.warn(importable)
2023-10-22T14:18:25,389   /tmp/pip-build-env-x7faexbw/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pyhmmer.tests.data.hmms' is absent from the `packages` configuration.
2023-10-22T14:18:25,389   !!

2023-10-22T14:18:25,390           ********************************************************************************
2023-10-22T14:18:25,390           ############################
2023-10-22T14:18:25,390           # Package would be ignored #
2023-10-22T14:18:25,391           ############################
2023-10-22T14:18:25,391           Python recognizes 'pyhmmer.tests.data.hmms' as an importable package[^1],
2023-10-22T14:18:25,391           but it is absent from setuptools' `packages` configuration.

2023-10-22T14:18:25,392           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-22T14:18:25,392           package, please make sure that 'pyhmmer.tests.data.hmms' is explicitly added
2023-10-22T14:18:25,392           to the `packages` configuration field.

2023-10-22T14:18:25,393           Alternatively, you can also rely on setuptools' discovery methods
2023-10-22T14:18:25,393           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-22T14:18:25,393           instead of `find_packages(...)`/`find:`).

2023-10-22T14:18:25,394           You can read more about "package discovery" on setuptools documentation page:

2023-10-22T14:18:25,395           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-22T14:18:25,395           If you don't want 'pyhmmer.tests.data.hmms' to be distributed and are
2023-10-22T14:18:25,395           already explicitly excluding 'pyhmmer.tests.data.hmms' via
2023-10-22T14:18:25,397           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-22T14:18:25,397           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-22T14:18:25,397           combination with a more fine grained `package-data` configuration.

2023-10-22T14:18:25,398           You can read more about "package data files" on setuptools documentation page:

2023-10-22T14:18:25,398           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-22T14:18:25,399           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-22T14:18:25,399                 even if it does not contain any `.py` files.
2023-10-22T14:18:25,400                 On the other hand, currently there is no concept of package data
2023-10-22T14:18:25,400                 directory, all directories are treated like packages.
2023-10-22T14:18:25,400           ********************************************************************************

2023-10-22T14:18:25,401   !!
2023-10-22T14:18:25,401     check.warn(importable)
2023-10-22T14:18:25,402   /tmp/pip-build-env-x7faexbw/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pyhmmer.tests.data.hmms.bin' is absent from the `packages` configuration.
2023-10-22T14:18:25,402   !!

2023-10-22T14:18:25,402           ********************************************************************************
2023-10-22T14:18:25,403           ############################
2023-10-22T14:18:25,403           # Package would be ignored #
2023-10-22T14:18:25,403           ############################
2023-10-22T14:18:25,404           Python recognizes 'pyhmmer.tests.data.hmms.bin' as an importable package[^1],
2023-10-22T14:18:25,404           but it is absent from setuptools' `packages` configuration.

2023-10-22T14:18:25,404           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-22T14:18:25,405           package, please make sure that 'pyhmmer.tests.data.hmms.bin' is explicitly added
2023-10-22T14:18:25,405           to the `packages` configuration field.

2023-10-22T14:18:25,406           Alternatively, you can also rely on setuptools' discovery methods
2023-10-22T14:18:25,406           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-22T14:18:25,406           instead of `find_packages(...)`/`find:`).

2023-10-22T14:18:25,407           You can read more about "package discovery" on setuptools documentation page:

2023-10-22T14:18:25,407           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-22T14:18:25,408           If you don't want 'pyhmmer.tests.data.hmms.bin' to be distributed and are
2023-10-22T14:18:25,408           already explicitly excluding 'pyhmmer.tests.data.hmms.bin' via
2023-10-22T14:18:25,408           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-22T14:18:25,409           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-22T14:18:25,409           combination with a more fine grained `package-data` configuration.

2023-10-22T14:18:25,409           You can read more about "package data files" on setuptools documentation page:

2023-10-22T14:18:25,410           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-22T14:18:25,411           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-22T14:18:25,411                 even if it does not contain any `.py` files.
2023-10-22T14:18:25,411                 On the other hand, currently there is no concept of package data
2023-10-22T14:18:25,412                 directory, all directories are treated like packages.
2023-10-22T14:18:25,412           ********************************************************************************

2023-10-22T14:18:25,412   !!
2023-10-22T14:18:25,413     check.warn(importable)
2023-10-22T14:18:25,413   /tmp/pip-build-env-x7faexbw/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pyhmmer.tests.data.hmms.db' is absent from the `packages` configuration.
2023-10-22T14:18:25,413   !!

2023-10-22T14:18:25,414           ********************************************************************************
2023-10-22T14:18:25,414           ############################
2023-10-22T14:18:25,414           # Package would be ignored #
2023-10-22T14:18:25,415           ############################
2023-10-22T14:18:25,415           Python recognizes 'pyhmmer.tests.data.hmms.db' as an importable package[^1],
2023-10-22T14:18:25,415           but it is absent from setuptools' `packages` configuration.

2023-10-22T14:18:25,416           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-22T14:18:25,416           package, please make sure that 'pyhmmer.tests.data.hmms.db' is explicitly added
2023-10-22T14:18:25,416           to the `packages` configuration field.

2023-10-22T14:18:25,417           Alternatively, you can also rely on setuptools' discovery methods
2023-10-22T14:18:25,417           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-22T14:18:25,417           instead of `find_packages(...)`/`find:`).

2023-10-22T14:18:25,418           You can read more about "package discovery" on setuptools documentation page:

2023-10-22T14:18:25,419           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-22T14:18:25,419           If you don't want 'pyhmmer.tests.data.hmms.db' to be distributed and are
2023-10-22T14:18:25,419           already explicitly excluding 'pyhmmer.tests.data.hmms.db' via
2023-10-22T14:18:25,420           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-22T14:18:25,420           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-22T14:18:25,420           combination with a more fine grained `package-data` configuration.

2023-10-22T14:18:25,421           You can read more about "package data files" on setuptools documentation page:

2023-10-22T14:18:25,421           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-22T14:18:25,422           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-22T14:18:25,422                 even if it does not contain any `.py` files.
2023-10-22T14:18:25,423                 On the other hand, currently there is no concept of package data
2023-10-22T14:18:25,423                 directory, all directories are treated like packages.
2023-10-22T14:18:25,423           ********************************************************************************

2023-10-22T14:18:25,424   !!
2023-10-22T14:18:25,424     check.warn(importable)
2023-10-22T14:18:25,424   /tmp/pip-build-env-x7faexbw/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pyhmmer.tests.data.hmms.txt' is absent from the `packages` configuration.
2023-10-22T14:18:25,425   !!

2023-10-22T14:18:25,425           ********************************************************************************
2023-10-22T14:18:25,426           ############################
2023-10-22T14:18:25,426           # Package would be ignored #
2023-10-22T14:18:25,426           ############################
2023-10-22T14:18:25,427           Python recognizes 'pyhmmer.tests.data.hmms.txt' as an importable package[^1],
2023-10-22T14:18:25,427           but it is absent from setuptools' `packages` configuration.

2023-10-22T14:18:25,428           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-22T14:18:25,428           package, please make sure that 'pyhmmer.tests.data.hmms.txt' is explicitly added
2023-10-22T14:18:25,428           to the `packages` configuration field.

2023-10-22T14:18:25,429           Alternatively, you can also rely on setuptools' discovery methods
2023-10-22T14:18:25,429           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-22T14:18:25,429           instead of `find_packages(...)`/`find:`).

2023-10-22T14:18:25,430           You can read more about "package discovery" on setuptools documentation page:

2023-10-22T14:18:25,430           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-22T14:18:25,431           If you don't want 'pyhmmer.tests.data.hmms.txt' to be distributed and are
2023-10-22T14:18:25,431           already explicitly excluding 'pyhmmer.tests.data.hmms.txt' via
2023-10-22T14:18:25,431           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-22T14:18:25,432           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-22T14:18:25,432           combination with a more fine grained `package-data` configuration.

2023-10-22T14:18:25,433           You can read more about "package data files" on setuptools documentation page:

2023-10-22T14:18:25,433           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-22T14:18:25,434           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-22T14:18:25,434                 even if it does not contain any `.py` files.
2023-10-22T14:18:25,435                 On the other hand, currently there is no concept of package data
2023-10-22T14:18:25,435                 directory, all directories are treated like packages.
2023-10-22T14:18:25,435           ********************************************************************************

2023-10-22T14:18:25,436   !!
2023-10-22T14:18:25,436     check.warn(importable)
2023-10-22T14:18:25,436   /tmp/pip-build-env-x7faexbw/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pyhmmer.tests.data.hmms.txt2' is absent from the `packages` configuration.
2023-10-22T14:18:25,437   !!

2023-10-22T14:18:25,437           ********************************************************************************
2023-10-22T14:18:25,437           ############################
2023-10-22T14:18:25,438           # Package would be ignored #
2023-10-22T14:18:25,438           ############################
2023-10-22T14:18:25,438           Python recognizes 'pyhmmer.tests.data.hmms.txt2' as an importable package[^1],
2023-10-22T14:18:25,439           but it is absent from setuptools' `packages` configuration.

2023-10-22T14:18:25,439           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-22T14:18:25,439           package, please make sure that 'pyhmmer.tests.data.hmms.txt2' is explicitly added
2023-10-22T14:18:25,440           to the `packages` configuration field.

2023-10-22T14:18:25,440           Alternatively, you can also rely on setuptools' discovery methods
2023-10-22T14:18:25,440           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-22T14:18:25,441           instead of `find_packages(...)`/`find:`).

2023-10-22T14:18:25,441           You can read more about "package discovery" on setuptools documentation page:

2023-10-22T14:18:25,442           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-22T14:18:25,442           If you don't want 'pyhmmer.tests.data.hmms.txt2' to be distributed and are
2023-10-22T14:18:25,443           already explicitly excluding 'pyhmmer.tests.data.hmms.txt2' via
2023-10-22T14:18:25,443           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-22T14:18:25,443           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-22T14:18:25,443           combination with a more fine grained `package-data` configuration.

2023-10-22T14:18:25,444           You can read more about "package data files" on setuptools documentation page:

2023-10-22T14:18:25,445           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-22T14:18:25,446           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-22T14:18:25,446                 even if it does not contain any `.py` files.
2023-10-22T14:18:25,447                 On the other hand, currently there is no concept of package data
2023-10-22T14:18:25,447                 directory, all directories are treated like packages.
2023-10-22T14:18:25,448           ********************************************************************************

2023-10-22T14:18:25,449   !!
2023-10-22T14:18:25,449     check.warn(importable)
2023-10-22T14:18:25,450   /tmp/pip-build-env-x7faexbw/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pyhmmer.tests.data.jackhmmer' is absent from the `packages` configuration.
2023-10-22T14:18:25,450   !!

2023-10-22T14:18:25,451           ********************************************************************************
2023-10-22T14:18:25,451           ############################
2023-10-22T14:18:25,452           # Package would be ignored #
2023-10-22T14:18:25,452           ############################
2023-10-22T14:18:25,453           Python recognizes 'pyhmmer.tests.data.jackhmmer' as an importable package[^1],
2023-10-22T14:18:25,453           but it is absent from setuptools' `packages` configuration.

2023-10-22T14:18:25,454           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-22T14:18:25,455           package, please make sure that 'pyhmmer.tests.data.jackhmmer' is explicitly added
2023-10-22T14:18:25,455           to the `packages` configuration field.

2023-10-22T14:18:25,456           Alternatively, you can also rely on setuptools' discovery methods
2023-10-22T14:18:25,456           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-22T14:18:25,457           instead of `find_packages(...)`/`find:`).

2023-10-22T14:18:25,458           You can read more about "package discovery" on setuptools documentation page:

2023-10-22T14:18:25,459           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-22T14:18:25,460           If you don't want 'pyhmmer.tests.data.jackhmmer' to be distributed and are
2023-10-22T14:18:25,460           already explicitly excluding 'pyhmmer.tests.data.jackhmmer' via
2023-10-22T14:18:25,461           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-22T14:18:25,461           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-22T14:18:25,462           combination with a more fine grained `package-data` configuration.

2023-10-22T14:18:25,463           You can read more about "package data files" on setuptools documentation page:

2023-10-22T14:18:25,464           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-22T14:18:25,465           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-22T14:18:25,466                 even if it does not contain any `.py` files.
2023-10-22T14:18:25,466                 On the other hand, currently there is no concept of package data
2023-10-22T14:18:25,467                 directory, all directories are treated like packages.
2023-10-22T14:18:25,467           ********************************************************************************

2023-10-22T14:18:25,468   !!
2023-10-22T14:18:25,469     check.warn(importable)
2023-10-22T14:18:25,469   /tmp/pip-build-env-x7faexbw/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pyhmmer.tests.data.msa' is absent from the `packages` configuration.
2023-10-22T14:18:25,470   !!

2023-10-22T14:18:25,471           ********************************************************************************
2023-10-22T14:18:25,471           ############################
2023-10-22T14:18:25,471           # Package would be ignored #
2023-10-22T14:18:25,472           ############################
2023-10-22T14:18:25,472           Python recognizes 'pyhmmer.tests.data.msa' as an importable package[^1],
2023-10-22T14:18:25,473           but it is absent from setuptools' `packages` configuration.

2023-10-22T14:18:25,474           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-22T14:18:25,474           package, please make sure that 'pyhmmer.tests.data.msa' is explicitly added
2023-10-22T14:18:25,475           to the `packages` configuration field.

2023-10-22T14:18:25,476           Alternatively, you can also rely on setuptools' discovery methods
2023-10-22T14:18:25,477           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-22T14:18:25,477           instead of `find_packages(...)`/`find:`).

2023-10-22T14:18:25,478           You can read more about "package discovery" on setuptools documentation page:

2023-10-22T14:18:25,479           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-22T14:18:25,480           If you don't want 'pyhmmer.tests.data.msa' to be distributed and are
2023-10-22T14:18:25,480           already explicitly excluding 'pyhmmer.tests.data.msa' via
2023-10-22T14:18:25,480           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-22T14:18:25,480           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-22T14:18:25,481           combination with a more fine grained `package-data` configuration.

2023-10-22T14:18:25,481           You can read more about "package data files" on setuptools documentation page:

2023-10-22T14:18:25,482           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-22T14:18:25,484           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-22T14:18:25,485                 even if it does not contain any `.py` files.
2023-10-22T14:18:25,486                 On the other hand, currently there is no concept of package data
2023-10-22T14:18:25,487                 directory, all directories are treated like packages.
2023-10-22T14:18:25,492           ********************************************************************************

2023-10-22T14:18:25,493   !!
2023-10-22T14:18:25,494     check.warn(importable)
2023-10-22T14:18:25,494   /tmp/pip-build-env-x7faexbw/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pyhmmer.tests.data.seqs' is absent from the `packages` configuration.
2023-10-22T14:18:25,495   !!

2023-10-22T14:18:25,496           ********************************************************************************
2023-10-22T14:18:25,496           ############################
2023-10-22T14:18:25,496           # Package would be ignored #
2023-10-22T14:18:25,497           ############################
2023-10-22T14:18:25,497           Python recognizes 'pyhmmer.tests.data.seqs' as an importable package[^1],
2023-10-22T14:18:25,498           but it is absent from setuptools' `packages` configuration.

2023-10-22T14:18:25,499           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-22T14:18:25,499           package, please make sure that 'pyhmmer.tests.data.seqs' is explicitly added
2023-10-22T14:18:25,500           to the `packages` configuration field.

2023-10-22T14:18:25,501           Alternatively, you can also rely on setuptools' discovery methods
2023-10-22T14:18:25,501           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-22T14:18:25,501           instead of `find_packages(...)`/`find:`).

2023-10-22T14:18:25,502           You can read more about "package discovery" on setuptools documentation page:

2023-10-22T14:18:25,503           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-22T14:18:25,504           If you don't want 'pyhmmer.tests.data.seqs' to be distributed and are
2023-10-22T14:18:25,505           already explicitly excluding 'pyhmmer.tests.data.seqs' via
2023-10-22T14:18:25,505           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-22T14:18:25,506           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-22T14:18:25,506           combination with a more fine grained `package-data` configuration.

2023-10-22T14:18:25,507           You can read more about "package data files" on setuptools documentation page:

2023-10-22T14:18:25,508           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-22T14:18:25,509           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-22T14:18:25,510                 even if it does not contain any `.py` files.
2023-10-22T14:18:25,510                 On the other hand, currently there is no concept of package data
2023-10-22T14:18:25,510                 directory, all directories are treated like packages.
2023-10-22T14:18:25,511           ********************************************************************************

2023-10-22T14:18:25,512   !!
2023-10-22T14:18:25,512     check.warn(importable)
2023-10-22T14:18:25,513   /tmp/pip-build-env-x7faexbw/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pyhmmer.tests.data.tables' is absent from the `packages` configuration.
2023-10-22T14:18:25,513   !!

2023-10-22T14:18:25,514           ********************************************************************************
2023-10-22T14:18:25,515           ############################
2023-10-22T14:18:25,515           # Package would be ignored #
2023-10-22T14:18:25,516           ############################
2023-10-22T14:18:25,516           Python recognizes 'pyhmmer.tests.data.tables' as an importable package[^1],
2023-10-22T14:18:25,517           but it is absent from setuptools' `packages` configuration.

2023-10-22T14:18:25,517           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-22T14:18:25,518           package, please make sure that 'pyhmmer.tests.data.tables' is explicitly added
2023-10-22T14:18:25,518           to the `packages` configuration field.

2023-10-22T14:18:25,520           Alternatively, you can also rely on setuptools' discovery methods
2023-10-22T14:18:25,521           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-22T14:18:25,521           instead of `find_packages(...)`/`find:`).

2023-10-22T14:18:25,522           You can read more about "package discovery" on setuptools documentation page:

2023-10-22T14:18:25,523           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-22T14:18:25,524           If you don't want 'pyhmmer.tests.data.tables' to be distributed and are
2023-10-22T14:18:25,524           already explicitly excluding 'pyhmmer.tests.data.tables' via
2023-10-22T14:18:25,524           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-22T14:18:25,525           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-22T14:18:25,525           combination with a more fine grained `package-data` configuration.

2023-10-22T14:18:25,526           You can read more about "package data files" on setuptools documentation page:

2023-10-22T14:18:25,526           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-22T14:18:25,527           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-22T14:18:25,528                 even if it does not contain any `.py` files.
2023-10-22T14:18:25,528                 On the other hand, currently there is no concept of package data
2023-10-22T14:18:25,528                 directory, all directories are treated like packages.
2023-10-22T14:18:25,528           ********************************************************************************

2023-10-22T14:18:25,529   !!
2023-10-22T14:18:25,529     check.warn(importable)
2023-10-22T14:18:25,530   copying pyhmmer/_getid.pxi -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-10-22T14:18:25,532   copying pyhmmer/daemon.pxd -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-10-22T14:18:25,533   copying pyhmmer/daemon.pyi -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-10-22T14:18:25,534   copying pyhmmer/daemon.pyx -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-10-22T14:18:25,535   copying pyhmmer/easel.pxd -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-10-22T14:18:25,537   copying pyhmmer/easel.pyi -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-10-22T14:18:25,542   copying pyhmmer/easel.pyx -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-10-22T14:18:25,543   copying pyhmmer/errors.pyi -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-10-22T14:18:25,543   copying pyhmmer/errors.pyx -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-10-22T14:18:25,544   copying pyhmmer/exceptions.pxi -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-10-22T14:18:25,544   copying pyhmmer/plan7.pxd -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-10-22T14:18:25,544   copying pyhmmer/plan7.pyi -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-10-22T14:18:25,545   copying pyhmmer/plan7.pyx -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-10-22T14:18:25,547   copying pyhmmer/py.typed -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-10-22T14:18:25,550   creating build/lib.linux-armv7l-cpython-37/pyhmmer/fileobj
2023-10-22T14:18:25,552   copying pyhmmer/fileobj/__init__.pxd -> build/lib.linux-armv7l-cpython-37/pyhmmer/fileobj
2023-10-22T14:18:25,556   copying pyhmmer/fileobj/bsd.h -> build/lib.linux-armv7l-cpython-37/pyhmmer/fileobj
2023-10-22T14:18:25,561   copying pyhmmer/fileobj/bsd.pxd -> build/lib.linux-armv7l-cpython-37/pyhmmer/fileobj
2023-10-22T14:18:25,565   copying pyhmmer/fileobj/linux.h -> build/lib.linux-armv7l-cpython-37/pyhmmer/fileobj
2023-10-22T14:18:25,570   copying pyhmmer/fileobj/linux.pxd -> build/lib.linux-armv7l-cpython-37/pyhmmer/fileobj
2023-10-22T14:18:25,574   copying pyhmmer/fileobj/util.h -> build/lib.linux-armv7l-cpython-37/pyhmmer/fileobj
2023-10-22T14:18:25,578   creating build/lib.linux-armv7l-cpython-37/pyhmmer/reexports
2023-10-22T14:18:25,580   copying pyhmmer/reexports/__init__.pxd -> build/lib.linux-armv7l-cpython-37/pyhmmer/reexports
2023-10-22T14:18:25,583   copying pyhmmer/reexports/esl_sqio_ascii.h -> build/lib.linux-armv7l-cpython-37/pyhmmer/reexports
2023-10-22T14:18:25,588   copying pyhmmer/reexports/esl_sqio_ascii.pxd -> build/lib.linux-armv7l-cpython-37/pyhmmer/reexports
2023-10-22T14:18:25,592   copying pyhmmer/reexports/p7_hmmfile.h -> build/lib.linux-armv7l-cpython-37/pyhmmer/reexports
2023-10-22T14:18:25,596   copying pyhmmer/reexports/p7_hmmfile.pxd -> build/lib.linux-armv7l-cpython-37/pyhmmer/reexports
2023-10-22T14:18:25,600   copying pyhmmer/reexports/p7_tophits.h -> build/lib.linux-armv7l-cpython-37/pyhmmer/reexports
2023-10-22T14:18:25,605   copying pyhmmer/reexports/p7_tophits.pxd -> build/lib.linux-armv7l-cpython-37/pyhmmer/reexports
2023-10-22T14:18:25,609   copying pyhmmer/tests/requirements.txt -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests
2023-10-22T14:18:25,613   creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data
2023-10-22T14:18:25,615   copying pyhmmer/tests/data/README.md -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data
2023-10-22T14:18:25,619   creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms
2023-10-22T14:18:25,621   copying pyhmmer/tests/data/hmms/make.sh -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms
2023-10-22T14:18:25,625   creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/bin
2023-10-22T14:18:25,627   copying pyhmmer/tests/data/hmms/bin/PF02826.h3m -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/bin
2023-10-22T14:18:25,634   copying pyhmmer/tests/data/hmms/bin/PKSI-AT.h3m -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/bin
2023-10-22T14:18:25,642   copying pyhmmer/tests/data/hmms/bin/Thioesterase.h3m -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/bin
2023-10-22T14:18:25,649   copying pyhmmer/tests/data/hmms/bin/t2pks.h3m -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/bin
2023-10-22T14:18:25,774   creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-10-22T14:18:25,775   copying pyhmmer/tests/data/hmms/db/PF02826.hmm -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-10-22T14:18:25,784   copying pyhmmer/tests/data/hmms/db/PF02826.hmm.h3f -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-10-22T14:18:25,790   copying pyhmmer/tests/data/hmms/db/PF02826.hmm.h3i -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-10-22T14:18:25,794   copying pyhmmer/tests/data/hmms/db/PF02826.hmm.h3m -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-10-22T14:18:25,801   copying pyhmmer/tests/data/hmms/db/PF02826.hmm.h3p -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-10-22T14:18:25,808   copying pyhmmer/tests/data/hmms/db/PKSI-AT.hmm -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-10-22T14:18:25,821   copying pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3f -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-10-22T14:18:25,827   copying pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3i -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-10-22T14:18:25,831   copying pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3m -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-10-22T14:18:25,839   copying pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3p -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-10-22T14:18:25,847   copying pyhmmer/tests/data/hmms/db/Thioesterase.hmm -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-10-22T14:18:25,858   copying pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3f -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-10-22T14:18:25,863   copying pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3i -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-10-22T14:18:25,868   copying pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3m -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-10-22T14:18:25,875   copying pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3p -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-10-22T14:18:25,882   copying pyhmmer/tests/data/hmms/db/t2pks.hmm -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-10-22T14:18:26,116   copying pyhmmer/tests/data/hmms/db/t2pks.hmm.h3f -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-10-22T14:18:26,182   copying pyhmmer/tests/data/hmms/db/t2pks.hmm.h3i -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-10-22T14:18:26,187   copying pyhmmer/tests/data/hmms/db/t2pks.hmm.h3m -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-10-22T14:18:26,297   copying pyhmmer/tests/data/hmms/db/t2pks.hmm.h3p -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-10-22T14:18:26,413   creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt
2023-10-22T14:18:26,415   copying pyhmmer/tests/data/hmms/txt/LuxC.hmm -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt
2023-10-22T14:18:26,430   copying pyhmmer/tests/data/hmms/txt/PF02826.hmm -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt
2023-10-22T14:18:26,438   copying pyhmmer/tests/data/hmms/txt/PKSI-AT.hmm -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt
2023-10-22T14:18:26,450   copying pyhmmer/tests/data/hmms/txt/Thioesterase.hmm -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt
2023-10-22T14:18:26,461   copying pyhmmer/tests/data/hmms/txt/bmyD.hmm -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt
2023-10-22T14:18:26,478   copying pyhmmer/tests/data/hmms/txt/laccase.hmm -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt
2023-10-22T14:18:26,499   copying pyhmmer/tests/data/hmms/txt/t2pks.hmm -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt
2023-10-22T14:18:26,749   creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt2
2023-10-22T14:18:26,750   copying pyhmmer/tests/data/hmms/txt2/PF02826.hmm2 -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt2
2023-10-22T14:18:26,759   copying pyhmmer/tests/data/hmms/txt2/PKSI-AT.hmm2 -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt2
2023-10-22T14:18:26,769   copying pyhmmer/tests/data/hmms/txt2/Thioesterase.hmm2 -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt2
2023-10-22T14:18:26,778   copying pyhmmer/tests/data/hmms/txt2/t2pks.hmm2 -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt2
2023-10-22T14:18:27,008   creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer
2023-10-22T14:18:27,010   copying pyhmmer/tests/data/jackhmmer/KR-1.sto -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer
2023-10-22T14:18:27,016   copying pyhmmer/tests/data/jackhmmer/KR-1_bkup.sto -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer
2023-10-22T14:18:27,022   copying pyhmmer/tests/data/jackhmmer/KR-2.sto -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer
2023-10-22T14:18:27,028   copying pyhmmer/tests/data/jackhmmer/KR-3.sto -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer
2023-10-22T14:18:27,034   copying pyhmmer/tests/data/jackhmmer/KR-4.sto -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer
2023-10-22T14:18:27,040   copying pyhmmer/tests/data/jackhmmer/KR-5.sto -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer
2023-10-22T14:18:27,046   copying pyhmmer/tests/data/jackhmmer/KR-6.sto -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer
2023-10-22T14:18:27,052   copying pyhmmer/tests/data/jackhmmer/p12748-1.sto -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer
2023-10-22T14:18:27,057   copying pyhmmer/tests/data/jackhmmer/p12748-2.sto -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer
2023-10-22T14:18:27,062   copying pyhmmer/tests/data/jackhmmer/p12748-3.sto -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer
2023-10-22T14:18:27,067   creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/msa
2023-10-22T14:18:27,070   copying pyhmmer/tests/data/msa/LuxC.faa -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/msa
2023-10-22T14:18:27,077   copying pyhmmer/tests/data/msa/LuxC.hmmalign.sto -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/msa
2023-10-22T14:18:27,083   copying pyhmmer/tests/data/msa/LuxC.sto -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/msa
2023-10-22T14:18:27,089   copying pyhmmer/tests/data/msa/laccase.clw -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/msa
2023-10-22T14:18:27,095   creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs
2023-10-22T14:18:27,097   copying pyhmmer/tests/data/seqs/938293.PRJEB85.HG003687.faa -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs
2023-10-22T14:18:27,153   copying pyhmmer/tests/data/seqs/BGC0001090.gbk -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs
2023-10-22T14:18:27,168   copying pyhmmer/tests/data/seqs/CP000560.2.fna -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs
2023-10-22T14:18:27,373   copying pyhmmer/tests/data/seqs/CP040672.1.genes_100.fna -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs
2023-10-22T14:18:27,384   copying pyhmmer/tests/data/seqs/LuxC.faa -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs
2023-10-22T14:18:27,389   copying pyhmmer/tests/data/seqs/PKSI.faa -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs
2023-10-22T14:18:27,394   copying pyhmmer/tests/data/seqs/bmyD.fna -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs
2023-10-22T14:18:27,398   creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables
2023-10-22T14:18:27,400   copying pyhmmer/tests/data/tables/A0A089QRB9.domtbl -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables
2023-10-22T14:18:27,405   copying pyhmmer/tests/data/tables/PF02826.domtbl -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables
2023-10-22T14:18:27,410   copying pyhmmer/tests/data/tables/PF02826.tbl -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables
2023-10-22T14:18:27,414   copying pyhmmer/tests/data/tables/bmyD1.tbl -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables
2023-10-22T14:18:27,418   copying pyhmmer/tests/data/tables/bmyD2.tbl -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables
2023-10-22T14:18:27,423   copying pyhmmer/tests/data/tables/bmyD3.tbl -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables
2023-10-22T14:18:27,427   copying pyhmmer/tests/data/tables/t2pks.domtbl -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables
2023-10-22T14:18:27,434   copying pyhmmer/tests/data/tables/t2pks.scan.tbl -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables
2023-10-22T14:18:27,439   copying pyhmmer/tests/data/tables/t2pks.tbl -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables
2023-10-22T14:18:27,452   running build_clib
2023-10-22T14:18:27,470   creating build/temp.linux-armv7l-cpython-37
2023-10-22T14:18:27,471   generating "divsufsort.h" for divsufsort library
2023-10-22T14:18:27,472   copying vendor/hmmer/libdivsufsort/divsufsort.h.in -> build/temp.linux-armv7l-cpython-37/divsufsort.h
2023-10-22T14:18:27,476   generating "esl_config.h" for easel library
2023-10-22T14:18:27,479   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -c build/temp.linux-armv7l-cpython-37/have_NEON.c -o build/temp.linux-armv7l-cpython-37/have_NEON.o
2023-10-22T14:18:28,226   arm-linux-gnueabihf-gcc -pthread -mfpu=neon build/temp.linux-armv7l-cpython-37/have_NEON.o -o build/temp.linux-armv7l-cpython-37/have_NEON
2023-10-22T14:18:28,898   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_stdio_h.c -o build/temp.linux-armv7l-cpython-37/have_stdio_h.o
2023-10-22T14:18:29,111   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_stdlib_h.c -o build/temp.linux-armv7l-cpython-37/have_stdlib_h.o
2023-10-22T14:18:29,342   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_string_h.c -o build/temp.linux-armv7l-cpython-37/have_string_h.o
2023-10-22T14:18:29,523   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_inttypes_h.c -o build/temp.linux-armv7l-cpython-37/have_inttypes_h.o
2023-10-22T14:18:29,706   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_stdint_h.c -o build/temp.linux-armv7l-cpython-37/have_stdint_h.o
2023-10-22T14:18:29,884   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_strings_h.c -o build/temp.linux-armv7l-cpython-37/have_strings_h.o
2023-10-22T14:18:30,058   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_sys_stat_h.c -o build/temp.linux-armv7l-cpython-37/have_sys_stat_h.o
2023-10-22T14:18:30,241   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_sys_types_h.c -o build/temp.linux-armv7l-cpython-37/have_sys_types_h.o
2023-10-22T14:18:30,440   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_unistd_h.c -o build/temp.linux-armv7l-cpython-37/have_unistd_h.o
2023-10-22T14:18:30,635   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_endian_h.c -o build/temp.linux-armv7l-cpython-37/have_endian_h.o
2023-10-22T14:18:30,814   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_netinet_in_h.c -o build/temp.linux-armv7l-cpython-37/have_netinet_in_h.o
2023-10-22T14:18:31,057   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_sys_param_h.c -o build/temp.linux-armv7l-cpython-37/have_sys_param_h.o
2023-10-22T14:18:31,312   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_sys_sysctl_h.c -o build/temp.linux-armv7l-cpython-37/have_sys_sysctl_h.o
2023-10-22T14:18:31,501   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_aligned_alloc.c -o build/temp.linux-armv7l-cpython-37/have_aligned_alloc.o -Wno-all
2023-10-22T14:18:31,749   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_aligned_alloc.o -o build/temp.linux-armv7l-cpython-37/have_aligned_alloc.bin
2023-10-22T14:18:32,377   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_erfc.c -o build/temp.linux-armv7l-cpython-37/have_erfc.o -Wno-all
2023-10-22T14:18:32,642   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_erfc.o -o build/temp.linux-armv7l-cpython-37/have_erfc.bin
2023-10-22T14:18:33,266   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_getpid.c -o build/temp.linux-armv7l-cpython-37/have_getpid.o -Wno-all
2023-10-22T14:18:33,497   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_getpid.o -o build/temp.linux-armv7l-cpython-37/have_getpid.bin
2023-10-22T14:18:34,126   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have__mm_malloc.c -o build/temp.linux-armv7l-cpython-37/have__mm_malloc.o -Wno-all
2023-10-22T14:18:34,365   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have__mm_malloc.o -o build/temp.linux-armv7l-cpython-37/have__mm_malloc.bin
2023-10-22T14:18:34,981   /usr/bin/ld: /tmp/cc4dVoIL.ltrans0.ltrans.o: in function `main':
2023-10-22T14:18:34,981   <artificial>:(.text.startup+0xc): undefined reference to `_mm_malloc'
2023-10-22T14:18:34,982   collect2: error: ld returned 1 exit status
2023-10-22T14:18:34,992   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_popen.c -o build/temp.linux-armv7l-cpython-37/have_popen.o -Wno-all
2023-10-22T14:18:35,225   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_popen.o -o build/temp.linux-armv7l-cpython-37/have_popen.bin
2023-10-22T14:18:35,859   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_posix_memalign.c -o build/temp.linux-armv7l-cpython-37/have_posix_memalign.o -Wno-all
2023-10-22T14:18:36,118   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_posix_memalign.o -o build/temp.linux-armv7l-cpython-37/have_posix_memalign.bin
2023-10-22T14:18:36,744   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_strcasecmp.c -o build/temp.linux-armv7l-cpython-37/have_strcasecmp.o -Wno-all
2023-10-22T14:18:36,943   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_strcasecmp.o -o build/temp.linux-armv7l-cpython-37/have_strcasecmp.bin
2023-10-22T14:18:37,565   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_strsep.c -o build/temp.linux-armv7l-cpython-37/have_strsep.o -Wno-all
2023-10-22T14:18:37,776   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_strsep.o -o build/temp.linux-armv7l-cpython-37/have_strsep.bin
2023-10-22T14:18:38,417   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_sysconf.c -o build/temp.linux-armv7l-cpython-37/have_sysconf.o -Wno-all
2023-10-22T14:18:38,639   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_sysconf.o -o build/temp.linux-armv7l-cpython-37/have_sysconf.bin
2023-10-22T14:18:39,259   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_sysctl.c -o build/temp.linux-armv7l-cpython-37/have_sysctl.o -Wno-all
2023-10-22T14:18:39,518   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_sysctl.o -o build/temp.linux-armv7l-cpython-37/have_sysctl.bin
2023-10-22T14:18:40,142   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_times.c -o build/temp.linux-armv7l-cpython-37/have_times.o -Wno-all
2023-10-22T14:18:40,348   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_times.o -o build/temp.linux-armv7l-cpython-37/have_times.bin
2023-10-22T14:18:40,977   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_fseeko.c -o build/temp.linux-armv7l-cpython-37/have_fseeko.o -Wno-all
2023-10-22T14:18:41,212   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_fseeko.o -o build/temp.linux-armv7l-cpython-37/have_fseeko.bin
2023-10-22T14:18:41,851   generating "p7_config.h" for hmmer library
2023-10-22T14:18:41,854   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -c build/temp.linux-armv7l-cpython-37/have_NEON.c -o build/temp.linux-armv7l-cpython-37/have_NEON.o
2023-10-22T14:18:42,590   arm-linux-gnueabihf-gcc -pthread -mfpu=neon build/temp.linux-armv7l-cpython-37/have_NEON.o -o build/temp.linux-armv7l-cpython-37/have_NEON
2023-10-22T14:18:43,243   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_endian_h.c -o build/temp.linux-armv7l-cpython-37/have_endian_h.o
2023-10-22T14:18:43,421   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_inttypes_h.c -o build/temp.linux-armv7l-cpython-37/have_inttypes_h.o
2023-10-22T14:18:43,604   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_stdint_h.c -o build/temp.linux-armv7l-cpython-37/have_stdint_h.o
2023-10-22T14:18:43,783   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_unistd_h.c -o build/temp.linux-armv7l-cpython-37/have_unistd_h.o
2023-10-22T14:18:43,977   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_sys_types_h.c -o build/temp.linux-armv7l-cpython-37/have_sys_types_h.o
2023-10-22T14:18:44,172   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_netinet_in_h.c -o build/temp.linux-armv7l-cpython-37/have_netinet_in_h.o
2023-10-22T14:18:44,409   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_sys_param_h.c -o build/temp.linux-armv7l-cpython-37/have_sys_param_h.o
2023-10-22T14:18:44,656   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_sys_sysctl_h.c -o build/temp.linux-armv7l-cpython-37/have_sys_sysctl_h.o
2023-10-22T14:18:44,839   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_mkstemp.c -o build/temp.linux-armv7l-cpython-37/have_mkstemp.o -Wno-all
2023-10-22T14:18:45,085   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_mkstemp.o -o build/temp.linux-armv7l-cpython-37/have_mkstemp.bin
2023-10-22T14:18:45,730   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_popen.c -o build/temp.linux-armv7l-cpython-37/have_popen.o -Wno-all
2023-10-22T14:18:45,963   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_popen.o -o build/temp.linux-armv7l-cpython-37/have_popen.bin
2023-10-22T14:18:46,599   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_putenv.c -o build/temp.linux-armv7l-cpython-37/have_putenv.o -Wno-all
2023-10-22T14:18:46,854   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_putenv.o -o build/temp.linux-armv7l-cpython-37/have_putenv.bin
2023-10-22T14:18:47,489   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_strcasecmp.c -o build/temp.linux-armv7l-cpython-37/have_strcasecmp.o -Wno-all
2023-10-22T14:18:47,689   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_strcasecmp.o -o build/temp.linux-armv7l-cpython-37/have_strcasecmp.bin
2023-10-22T14:18:48,313   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_strsep.c -o build/temp.linux-armv7l-cpython-37/have_strsep.o -Wno-all
2023-10-22T14:18:48,522   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_strsep.o -o build/temp.linux-armv7l-cpython-37/have_strsep.bin
2023-10-22T14:18:49,152   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_times.c -o build/temp.linux-armv7l-cpython-37/have_times.o -Wno-all
2023-10-22T14:18:49,358   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_times.o -o build/temp.linux-armv7l-cpython-37/have_times.bin
2023-10-22T14:18:49,991   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_getpid.c -o build/temp.linux-armv7l-cpython-37/have_getpid.o -Wno-all
2023-10-22T14:18:50,227   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_getpid.o -o build/temp.linux-armv7l-cpython-37/have_getpid.bin
2023-10-22T14:18:50,856   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_sysctl.c -o build/temp.linux-armv7l-cpython-37/have_sysctl.o -Wno-all
2023-10-22T14:18:51,107   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_sysctl.o -o build/temp.linux-armv7l-cpython-37/have_sysctl.bin
2023-10-22T14:18:51,744   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_sysconf.c -o build/temp.linux-armv7l-cpython-37/have_sysconf.o -Wno-all
2023-10-22T14:18:51,967   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_sysconf.o -o build/temp.linux-armv7l-cpython-37/have_sysconf.bin
2023-10-22T14:18:52,607   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_getcwd.c -o build/temp.linux-armv7l-cpython-37/have_getcwd.o -Wno-all
2023-10-22T14:18:52,832   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_getcwd.o -o build/temp.linux-armv7l-cpython-37/have_getcwd.bin
2023-10-22T14:18:53,469   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_chmod.c -o build/temp.linux-armv7l-cpython-37/have_chmod.o -Wno-all
2023-10-22T14:18:53,682   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_chmod.o -o build/temp.linux-armv7l-cpython-37/have_chmod.bin
2023-10-22T14:18:54,321   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_stat.c -o build/temp.linux-armv7l-cpython-37/have_stat.o -Wno-all
2023-10-22T14:18:54,547   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_stat.o -o build/temp.linux-armv7l-cpython-37/have_stat.bin
2023-10-22T14:18:55,180   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_fstat.c -o build/temp.linux-armv7l-cpython-37/have_fstat.o -Wno-all
2023-10-22T14:18:55,401   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_fstat.o -o build/temp.linux-armv7l-cpython-37/have_fstat.bin
2023-10-22T14:18:56,026   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_erfc.c -o build/temp.linux-armv7l-cpython-37/have_erfc.o -Wno-all
2023-10-22T14:18:56,297   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_erfc.o -o build/temp.linux-armv7l-cpython-37/have_erfc.bin
2023-10-22T14:18:56,923   generating build/temp.linux-armv7l-cpython-37/libdivsufsort.a from vendor/hmmer/libdivsufsort/divsufsort.c
2023-10-22T14:18:56,942   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/libdivsufsort/divsufsort.o from vendor/hmmer/libdivsufsort/divsufsort.c
2023-10-22T14:18:56,943   creating build/temp.linux-armv7l-cpython-37/vendor
2023-10-22T14:18:56,944   creating build/temp.linux-armv7l-cpython-37/vendor/hmmer
2023-10-22T14:18:56,946   creating build/temp.linux-armv7l-cpython-37/vendor/hmmer/libdivsufsort
2023-10-22T14:18:56,948   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/libdivsufsort/divsufsort.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/libdivsufsort/divsufsort.o
2023-10-22T14:19:05,966   arm-linux-gnueabihf-gcc-ar rcs build/temp.linux-armv7l-cpython-37/libdivsufsort.a build/temp.linux-armv7l-cpython-37/vendor/hmmer/libdivsufsort/divsufsort.o
2023-10-22T14:19:06,031   generating build/temp.linux-armv7l-cpython-37/libeasel.a from vendor/easel/esl_mixdchlet.c, vendor/easel/esl_minimizer.c, vendor/easel/easel.c, vendor/easel/esl_msafile_clustal.c, vendor/easel/esl_sse.c, vendor/easel/esl_vmx.c, vendor/easel/esl_distance.c, vendor/easel/esl_dirichlet.c, vendor/easel/esl_mpi.c, vendor/easel/esl_stretchexp.c, vendor/easel/esl_huffman.c, vendor/easel/esl_swat.c, vendor/easel/esl_graph.c, vendor/easel/esl_randomseq.c, vendor/easel/esl_msafile_selex.c, vendor/easel/esl_avx.c, vendor/easel/esl_msashuffle.c, vendor/easel/esl_bitfield.c, vendor/easel/esl_hmm.c, vendor/easel/esl_red_black.c, vendor/easel/esl_composition.c, vendor/easel/esl_msacluster.c, vendor/easel/esl_cpu.c, vendor/easel/interface_lapack.c, vendor/easel/esl_alloc.c, vendor/easel/esl_varint.c, vendor/easel/esl_stopwatch.c, vendor/easel/esl_subcmd.c, vendor/easel/esl_paml.c, vendor/easel/esl_heap.c, vendor/easel/esl_histogram.c, vendor/easel/esl_vectorops.c, vendor/easel/esl_msafile2.c, vendor/easel/esl_sqio.c, vendor/easel/esl_normal.c, vendor/easel/esl_msafile_phylip.c, vendor/easel/esl_msafile.c, vendor/easel/esl_arr3.c, vendor/easel/esl_avx512.c, vendor/easel/esl_mem.c, vendor/easel/esl_gumbel.c, vendor/easel/esl_msaweight.c, vendor/easel/esl_rootfinder.c, vendor/easel/esl_exponential.c, vendor/easel/esl_workqueue.c, vendor/easel/esl_getopts.c, vendor/easel/esl_rand64.c, vendor/easel/esl_stats.c, vendor/easel/interface_gsl.c, vendor/easel/esl_random.c, vendor/easel/esl_gamma.c, vendor/easel/esl_buffer.c, vendor/easel/esl_ssi.c, vendor/easel/esl_msafile_psiblast.c, vendor/easel/esl_dmatrix.c, vendor/easel/esl_weibull.c, vendor/easel/esl_fileparser.c, vendor/easel/esl_gev.c, vendor/easel/esl_msafile_stockholm.c, vendor/easel/esl_hyperexp.c, vendor/easel/esl_cluster.c, vendor/easel/esl_neon.c, vendor/easel/esl_sqio_ascii.c, vendor/easel/esl_msafile_a2m.c, vendor/easel/esl_quicksort.c, vendor/easel/esl_stack.c, vendor/easel/esl_dsqdata.c, vendor/easel/esl_msafile_afa.c, vendor/easel/esl_tree.c, vendor/easel/esl_threads.c, vendor/easel/esl_iset.c, vendor/easel/esl_regexp.c, vendor/easel/esl_json.c, vendor/easel/esl_keyhash.c, vendor/easel/esl_wuss.c, vendor/easel/esl_scorematrix.c, vendor/easel/esl_lognormal.c, vendor/easel/esl_gencode.c, vendor/easel/esl_recorder.c, vendor/easel/esl_sq.c, vendor/easel/esl_sqio_ncbi.c, vendor/easel/esl_alphabet.c, vendor/easel/esl_mixgev.c, vendor/easel/esl_ratematrix.c, vendor/easel/esl_arr2.c, vendor/easel/esl_msa.c, vendor/easel/esl_matrixops.c
2023-10-22T14:19:06,032   generating build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c from vendor/easel/esl_sqio_ascii.c
2023-10-22T14:19:06,066   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mixdchlet.o from vendor/easel/esl_mixdchlet.c
2023-10-22T14:19:06,068   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_graph.o from vendor/easel/esl_graph.c
2023-10-22T14:19:06,070   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_distance.o from vendor/easel/esl_distance.c
2023-10-22T14:19:06,071   creating build/temp.linux-armv7l-cpython-37/vendor/easel
2023-10-22T14:19:06,071   creating build/temp.linux-armv7l-cpython-37/vendor/easel
2023-10-22T14:19:06,071   creating build/temp.linux-armv7l-cpython-37/vendor/easel
2023-10-22T14:19:06,073   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_hmm.o from vendor/easel/esl_hmm.c
2023-10-22T14:19:06,074   creating build/temp.linux-armv7l-cpython-37/vendor/easel
2023-10-22T14:19:06,074   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_distance.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_distance.o
2023-10-22T14:19:06,087   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_graph.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_graph.o
2023-10-22T14:19:06,091   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_mixdchlet.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mixdchlet.o
2023-10-22T14:19:06,092   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_hmm.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_hmm.o
2023-10-22T14:19:06,491   In file included from vendor/easel/esl_hmm.c:9:
2023-10-22T14:19:06,492   vendor/easel/esl_hmm.c: In function ‘esl_hmx_GrowTo’:
2023-10-22T14:19:06,492   vendor/easel/easel.h:431:36: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:19:06,493    #define ESL_MIN(a,b)          (((a)<(b))?(a):(b))
2023-10-22T14:19:06,493                                       ^
2023-10-22T14:19:06,494   vendor/easel/esl_hmm.c:265:20: note: in expansion of macro ‘ESL_MIN’
2023-10-22T14:19:06,494          mx->validR = ESL_MIN(mx->ncells / mx->allocM, mx->allocR);
2023-10-22T14:19:06,494                       ^~~~~~~
2023-10-22T14:19:06,495   vendor/easel/easel.h:431:46: warning: operand of ?: changes signedness from ‘int’ to ‘uint64_t’ {aka ‘long long unsigned int’} due to unsignedness of other operand [-Wsign-compare]
2023-10-22T14:19:06,495    #define ESL_MIN(a,b)          (((a)<(b))?(a):(b))
2023-10-22T14:19:06,496                                                 ^~~
2023-10-22T14:19:06,496   vendor/easel/esl_hmm.c:265:20: note: in expansion of macro ‘ESL_MIN’
2023-10-22T14:19:06,497          mx->validR = ESL_MIN(mx->ncells / mx->allocM, mx->allocR);
2023-10-22T14:19:06,497                       ^~~~~~~
2023-10-22T14:19:06,955   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_randomseq.o from vendor/easel/esl_randomseq.c
2023-10-22T14:19:06,959   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_randomseq.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_randomseq.o
2023-10-22T14:19:08,285   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_minimizer.o from vendor/easel/esl_minimizer.c
2023-10-22T14:19:08,287   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_minimizer.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_minimizer.o
2023-10-22T14:19:08,367   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_red_black.o from vendor/easel/esl_red_black.c
2023-10-22T14:19:08,368   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_red_black.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_red_black.o
2023-10-22T14:19:09,117   vendor/easel/esl_minimizer.c: In function ‘esl_min_ConjugateGradientDescent’:
2023-10-22T14:19:09,118   vendor/easel/esl_minimizer.c:243:23: warning: ‘fx’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T14:19:09,118      if (opt_fx) *opt_fx = fx;
2023-10-22T14:19:09,119                  ~~~~~~~~^~~~
2023-10-22T14:19:09,120   vendor/easel/esl_minimizer.c:711:18: warning: ‘cx’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T14:19:09,120      x=v=w= a + c*(b-a);           /* initial guess of x by golden section */
2023-10-22T14:19:09,121                   ~~^~~
2023-10-22T14:19:09,122   vendor/easel/esl_minimizer.c:118:16: note: ‘cx’ was declared here
2023-10-22T14:19:09,122      double ax,bx,cx;
2023-10-22T14:19:09,122                   ^~
2023-10-22T14:19:09,124   vendor/easel/esl_minimizer.c:711:8: warning: ‘ax’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T14:19:09,124      x=v=w= a + c*(b-a);           /* initial guess of x by golden section */
2023-10-22T14:19:09,125          ~^~~~~~~~~~~~~
2023-10-22T14:19:09,125   vendor/easel/esl_minimizer.c:118:10: note: ‘ax’ was declared here
2023-10-22T14:19:09,126      double ax,bx,cx;
2023-10-22T14:19:09,126             ^~
2023-10-22T14:19:09,276   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_dirichlet.o from vendor/easel/esl_dirichlet.c
2023-10-22T14:19:09,277   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_dirichlet.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_dirichlet.o
2023-10-22T14:19:09,297   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_composition.o from vendor/easel/esl_composition.c
2023-10-22T14:19:09,299   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_composition.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_composition.o
2023-10-22T14:19:09,907   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msacluster.o from vendor/easel/esl_msacluster.c
2023-10-22T14:19:09,909   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_msacluster.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msacluster.o
2023-10-22T14:19:10,077   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mpi.o from vendor/easel/esl_mpi.c
2023-10-22T14:19:10,077   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_mpi.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mpi.o
2023-10-22T14:19:10,292   generating build/temp.linux-armv7l-cpython-37/vendor/easel/easel.o from vendor/easel/easel.c
2023-10-22T14:19:10,295   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/easel.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/easel.o
2023-10-22T14:19:10,519   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stretchexp.o from vendor/easel/esl_stretchexp.c
2023-10-22T14:19:10,522   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_stretchexp.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stretchexp.o
2023-10-22T14:19:10,724   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_cpu.o from vendor/easel/esl_cpu.c
2023-10-22T14:19:10,725   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_cpu.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_cpu.o
2023-10-22T14:19:10,858   vendor/easel/easel.c: In function ‘esl_FileNewSuffix’:
2023-10-22T14:19:10,859   vendor/easel/easel.c:1942:46: warning: operand of ?: changes signedness from ‘int’ to ‘size_t’ {aka ‘unsigned int’} due to unsignedness of other operand [-Wsign-compare]
2023-10-22T14:19:10,860      nf = (lastdot == NULL)? strlen(filename) : lastdot-filename;
2023-10-22T14:19:10,860                                                 ^~~~~~~~~~~~~~~~
2023-10-22T14:19:11,195   generating build/temp.linux-armv7l-cpython-37/vendor/easel/interface_lapack.o from vendor/easel/interface_lapack.c
2023-10-22T14:19:11,197   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/interface_lapack.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/interface_lapack.o
2023-10-22T14:19:11,325   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_selex.o from vendor/easel/esl_msafile_selex.c
2023-10-22T14:19:11,328   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_msafile_selex.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_selex.o
2023-10-22T14:19:11,375   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_alloc.o from vendor/easel/esl_alloc.c
2023-10-22T14:19:11,377   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_alloc.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_alloc.o
2023-10-22T14:19:11,853   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_huffman.o from vendor/easel/esl_huffman.c
2023-10-22T14:19:11,855   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_huffman.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_huffman.o
2023-10-22T14:19:11,871   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_varint.o from vendor/easel/esl_varint.c
2023-10-22T14:19:11,873   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_varint.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_varint.o
2023-10-22T14:19:12,830   vendor/easel/esl_varint.c: In function ‘esl_varint_google_decode’:
2023-10-22T14:19:12,831   vendor/easel/esl_varint.c:471:11: warning: ‘grp’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T14:19:12,832      if (grp & cmask) { status = eslEOD; goto ERROR; }
2023-10-22T14:19:12,832          ~~~~^~~~~~~
2023-10-22T14:19:13,041   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stopwatch.o from vendor/easel/esl_stopwatch.c
2023-10-22T14:19:13,043   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_stopwatch.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stopwatch.o
2023-10-22T14:19:13,206   vendor/easel/esl_msafile_selex.c: In function ‘esl_msafile_selex_Read’:
2023-10-22T14:19:13,207   vendor/easel/esl_msafile_selex.c:722:71: warning: ‘p’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T14:19:13,207       for (alen = msa->alen+nleft+ntext; alen < msa->alen+nadd; alen++) p[alen] = '.';
2023-10-22T14:19:13,208                                                                          ^
2023-10-22T14:19:13,209   vendor/easel/esl_msafile_selex.c:645:13: note: ‘p’ was declared here
2023-10-22T14:19:13,209      char     *p;
2023-10-22T14:19:13,210                ^
2023-10-22T14:19:13,410   vendor/easel/esl_stopwatch.c:15:15: warning: ‘stopwatch_getRealTime’ declared ‘static’ but never defined [-Wunused-function]
2023-10-22T14:19:13,410    static double stopwatch_getRealTime(void);
2023-10-22T14:19:13,411                  ^~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:19:13,591   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_swat.o from vendor/easel/esl_swat.c
2023-10-22T14:19:13,594   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_swat.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_swat.o
2023-10-22T14:19:13,889   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_subcmd.o from vendor/easel/esl_subcmd.c
2023-10-22T14:19:13,891   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_subcmd.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_subcmd.o
2023-10-22T14:19:13,966   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_clustal.o from vendor/easel/esl_msafile_clustal.c
2023-10-22T14:19:13,968   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_msafile_clustal.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_clustal.o
2023-10-22T14:19:14,419   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_histogram.o from vendor/easel/esl_histogram.c
2023-10-22T14:19:14,422   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_histogram.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_histogram.o
2023-10-22T14:19:14,514   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_paml.o from vendor/easel/esl_paml.c
2023-10-22T14:19:14,515   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_paml.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_paml.o
2023-10-22T14:19:14,816   vendor/easel/esl_histogram.c: In function ‘esl_histogram_GetRank’:
2023-10-22T14:19:14,827   vendor/easel/esl_histogram.c:541:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:19:14,828      if (rank > h->n)
2023-10-22T14:19:14,828               ^
2023-10-22T14:19:15,184   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_heap.o from vendor/easel/esl_heap.c
2023-10-22T14:19:15,186   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_heap.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_heap.o
2023-10-22T14:19:15,701   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_avx.o from vendor/easel/esl_avx.c
2023-10-22T14:19:15,703   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_avx.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_avx.o
2023-10-22T14:19:15,979   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msashuffle.o from vendor/easel/esl_msashuffle.c
2023-10-22T14:19:15,981   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_msashuffle.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msashuffle.o
2023-10-22T14:19:16,121   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile.o from vendor/easel/esl_msafile.c
2023-10-22T14:19:16,123   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_msafile.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile.o
2023-10-22T14:19:16,378   vendor/easel/esl_msashuffle.c: In function ‘esl_msashuffle_CQRNA’:
2023-10-22T14:19:16,379   vendor/easel/esl_msashuffle.c:449:17: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:19:16,380      if (strlen(y) != L) ESL_XEXCEPTION(eslEINVAL, "sequences of different lengths in qrna shuffle");
2023-10-22T14:19:16,380                    ^~
2023-10-22T14:19:16,944   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sse.o from vendor/easel/esl_sse.c
2023-10-22T14:19:16,946   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_sse.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sse.o
2023-10-22T14:19:17,170   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_vmx.o from vendor/easel/esl_vmx.c
2023-10-22T14:19:17,172   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_vmx.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_vmx.o
2023-10-22T14:19:17,393   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_rootfinder.o from vendor/easel/esl_rootfinder.c
2023-10-22T14:19:17,395   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_rootfinder.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_rootfinder.o
2023-10-22T14:19:17,995   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_bitfield.o from vendor/easel/esl_bitfield.c
2023-10-22T14:19:17,995   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_bitfield.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_bitfield.o
2023-10-22T14:19:18,020   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_vectorops.o from vendor/easel/esl_vectorops.c
2023-10-22T14:19:18,024   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_vectorops.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_vectorops.o
2023-10-22T14:19:18,333   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_exponential.o from vendor/easel/esl_exponential.c
2023-10-22T14:19:18,335   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_exponential.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_exponential.o
2023-10-22T14:19:18,630   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_arr3.o from vendor/easel/esl_arr3.c
2023-10-22T14:19:18,632   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_arr3.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_arr3.o
2023-10-22T14:19:18,696   generating build/temp.linux-armv7l-cpython-37/vendor/easel/interface_gsl.o from vendor/easel/interface_gsl.c
2023-10-22T14:19:18,698   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/interface_gsl.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/interface_gsl.o
2023-10-22T14:19:18,891   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_random.o from vendor/easel/esl_random.c
2023-10-22T14:19:18,893   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_random.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_random.o
2023-10-22T14:19:19,265   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_avx512.o from vendor/easel/esl_avx512.c
2023-10-22T14:19:19,267   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_avx512.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_avx512.o
2023-10-22T14:19:19,287   vendor/easel/esl_random.c: In function ‘esl_rnd_Roll’:
2023-10-22T14:19:19,288   vendor/easel/esl_random.c:319:54: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:19:19,289      do { u = esl_random_uint32(r) / factor; } while (u >= n);
2023-10-22T14:19:19,289                                                         ^~
2023-10-22T14:19:19,313   vendor/easel/esl_random.c: In function ‘gamma_integer’:
2023-10-22T14:19:19,314   vendor/easel/esl_random.c:655:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-10-22T14:19:19,315      for (i = 0; i < a; i++)
2023-10-22T14:19:19,315                    ^
2023-10-22T14:19:19,433   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_workqueue.o from vendor/easel/esl_workqueue.c
2023-10-22T14:19:19,435   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_workqueue.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_workqueue.o
2023-10-22T14:19:19,571   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mem.o from vendor/easel/esl_mem.c
2023-10-22T14:19:19,572   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_mem.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mem.o
2023-10-22T14:19:19,640   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_getopts.o from vendor/easel/esl_getopts.c
2023-10-22T14:19:19,642   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_getopts.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_getopts.o
2023-10-22T14:19:20,079   vendor/easel/esl_getopts.c: In function ‘get_optidx_abbrev’:
2023-10-22T14:19:20,080   vendor/easel/esl_getopts.c:1391:8: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:20,080     if (n == strlen(g->opt[i].name)) { nexact++; break; } /* an exact match; can stop now (xref bug #e4) */
2023-10-22T14:19:20,081           ^~
2023-10-22T14:19:20,838   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gamma.o from vendor/easel/esl_gamma.c
2023-10-22T14:19:20,840   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_gamma.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gamma.o
2023-10-22T14:19:22,054   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gumbel.o from vendor/easel/esl_gumbel.c
2023-10-22T14:19:22,056   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_gumbel.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gumbel.o
2023-10-22T14:19:22,480   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_buffer.o from vendor/easel/esl_buffer.c
2023-10-22T14:19:22,482   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_buffer.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_buffer.o
2023-10-22T14:19:23,682   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile2.o from vendor/easel/esl_msafile2.c
2023-10-22T14:19:23,684   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_msafile2.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile2.o
2023-10-22T14:19:23,903   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msaweight.o from vendor/easel/esl_msaweight.c
2023-10-22T14:19:23,905   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_msaweight.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msaweight.o
2023-10-22T14:19:24,102   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_rand64.o from vendor/easel/esl_rand64.c
2023-10-22T14:19:24,104   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_rand64.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_rand64.o
2023-10-22T14:19:24,138   In file included from vendor/easel/esl_msafile2.c:26:
2023-10-22T14:19:24,139   vendor/easel/esl_msafile2.c: In function ‘esl_msafile2_ReadInfoPfam’:
2023-10-22T14:19:24,142   vendor/easel/easel.h:432:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:24,143    #define ESL_MAX(a,b)          (((a)>(b))?(a):(b))
2023-10-22T14:19:24,143                                       ^
2023-10-22T14:19:24,144   vendor/easel/esl_msafile2.c:632:43: note: in expansion of macro ‘ESL_MAX’
2023-10-22T14:19:24,145        for(i = 0; i < msa->ngc; i++) maxgc = ESL_MAX(maxgc, strlen(msa->gc_tag[i]));
2023-10-22T14:19:24,145                                              ^~~~~~~
2023-10-22T14:19:24,147   vendor/easel/easel.h:432:42: warning: operand of ?: changes signedness from ‘int’ to ‘size_t’ {aka ‘unsigned int’} due to unsignedness of other operand [-Wsign-compare]
2023-10-22T14:19:24,148    #define ESL_MAX(a,b)          (((a)>(b))?(a):(b))
2023-10-22T14:19:24,148                                             ^~~
2023-10-22T14:19:24,149   vendor/easel/esl_msafile2.c:632:43: note: in expansion of macro ‘ESL_MAX’
2023-10-22T14:19:24,149        for(i = 0; i < msa->ngc; i++) maxgc = ESL_MAX(maxgc, strlen(msa->gc_tag[i]));
2023-10-22T14:19:24,150                                              ^~~~~~~
2023-10-22T14:19:24,155   vendor/easel/easel.h:432:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:24,156    #define ESL_MAX(a,b)          (((a)>(b))?(a):(b))
2023-10-22T14:19:24,157                                       ^
2023-10-22T14:19:24,157   vendor/easel/esl_msafile2.c:641:43: note: in expansion of macro ‘ESL_MAX’
2023-10-22T14:19:24,158        for(i = 0; i < msa->ngf; i++) maxgf = ESL_MAX(maxgf, strlen(msa->gf_tag[i]));
2023-10-22T14:19:24,158                                              ^~~~~~~
2023-10-22T14:19:24,159   vendor/easel/easel.h:432:42: warning: operand of ?: changes signedness from ‘int’ to ‘size_t’ {aka ‘unsigned int’} due to unsignedness of other operand [-Wsign-compare]
2023-10-22T14:19:24,160    #define ESL_MAX(a,b)          (((a)>(b))?(a):(b))
2023-10-22T14:19:24,160                                             ^~~
2023-10-22T14:19:24,161   vendor/easel/esl_msafile2.c:641:43: note: in expansion of macro ‘ESL_MAX’
2023-10-22T14:19:24,161        for(i = 0; i < msa->ngf; i++) maxgf = ESL_MAX(maxgf, strlen(msa->gf_tag[i]));
2023-10-22T14:19:24,161                                              ^~~~~~~
2023-10-22T14:19:25,414   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stats.o from vendor/easel/esl_stats.c
2023-10-22T14:19:25,416   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_stats.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stats.o
2023-10-22T14:19:25,890   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_ssi.o from vendor/easel/esl_ssi.c
2023-10-22T14:19:25,892   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_ssi.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_ssi.o
2023-10-22T14:19:26,257   vendor/easel/esl_ssi.c: In function ‘esl_ssi_FindNumber’:
2023-10-22T14:19:26,258   vendor/easel/esl_ssi.c:261:12: warning: comparison of integer expressions of different signedness: ‘int64_t’ {aka ‘long long int’} and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:19:26,259      if (nkey >= ssi->nprimary) { status = eslENOTFOUND; goto ERROR; }
2023-10-22T14:19:26,260               ^~
2023-10-22T14:19:26,284   vendor/easel/esl_ssi.c: In function ‘esl_newssi_AddFile’:
2023-10-22T14:19:26,285   vendor/easel/esl_ssi.c:728:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:26,285      if ((n+1) > ns->flen) ns->flen = n+1;
2023-10-22T14:19:26,286                ^
2023-10-22T14:19:26,294   vendor/easel/esl_ssi.c: In function ‘esl_newssi_AddKey’:
2023-10-22T14:19:26,295   vendor/easel/esl_ssi.c:862:9: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:26,296      if (n > ns->plen) ns->plen = n;
2023-10-22T14:19:26,296            ^
2023-10-22T14:19:26,299   vendor/easel/esl_ssi.c:893:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:19:26,300     for (i = ns->nprimary; i < ns->nprimary + eslSSI_KCHUNK; i++)
2023-10-22T14:19:26,300                              ^
2023-10-22T14:19:26,301   vendor/easel/esl_ssi.c: In function ‘esl_newssi_AddAlias’:
2023-10-22T14:19:26,302   vendor/easel/esl_ssi.c:941:9: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:26,303      if (n > ns->slen) ns->slen = n;
2023-10-22T14:19:26,304            ^
2023-10-22T14:19:26,306   vendor/easel/esl_ssi.c:957:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:19:26,307     for (i = ns->nsecondary; i < ns->nsecondary+eslSSI_KCHUNK; i++) {
2023-10-22T14:19:26,308                                ^
2023-10-22T14:19:26,319   vendor/easel/esl_ssi.c: In function ‘esl_newssi_Write’:
2023-10-22T14:19:26,320   vendor/easel/esl_ssi.c:1143:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:19:26,321          for (i = 0; i < ns->nprimary; i++)
2023-10-22T14:19:26,321                        ^
2023-10-22T14:19:26,323   vendor/easel/esl_ssi.c:1161:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:19:26,323          for (i = 0; i < ns->nprimary; i++)
2023-10-22T14:19:26,324                        ^
2023-10-22T14:19:26,326   vendor/easel/esl_ssi.c:1181:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:19:26,327          for (i = 0; i < ns->nsecondary; i++)
2023-10-22T14:19:26,327                        ^
2023-10-22T14:19:26,329   vendor/easel/esl_ssi.c:1198:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:19:26,330          for (i = 0; i < ns->nsecondary; i++)
2023-10-22T14:19:26,330                        ^
2023-10-22T14:19:26,338   vendor/easel/esl_ssi.c: In function ‘esl_newssi_Close’:
2023-10-22T14:19:26,339   vendor/easel/esl_ssi.c:1247:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:19:26,339       for (i = 0; i < ns->nprimary; i++)
2023-10-22T14:19:26,340                     ^
2023-10-22T14:19:26,340   vendor/easel/esl_ssi.c:1253:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:19:26,341       for (i = 0; i < ns->nsecondary; i++)
2023-10-22T14:19:26,342                     ^
2023-10-22T14:19:26,352   vendor/easel/esl_ssi.c: In function ‘activate_external_sort’:
2023-10-22T14:19:26,353   vendor/easel/esl_ssi.c:1345:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:19:26,354      for (i = 0; i < ns->nprimary; i++) {
2023-10-22T14:19:26,354                    ^
2023-10-22T14:19:26,355   vendor/easel/esl_ssi.c:1364:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:19:26,356      for (i = 0; i < ns->nsecondary; i++)
2023-10-22T14:19:26,356                    ^
2023-10-22T14:19:26,357   vendor/easel/esl_ssi.c:1370:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:19:26,358      for (i = 0; i < ns->nprimary;   i++) free(ns->pkeys[i].key);
2023-10-22T14:19:26,358                    ^
2023-10-22T14:19:26,359   vendor/easel/esl_ssi.c:1371:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:19:26,359      for (i = 0; i < ns->nsecondary; i++) free(ns->skeys[i].key);
2023-10-22T14:19:26,360                    ^
2023-10-22T14:19:26,361   vendor/easel/esl_ssi.c:1372:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:19:26,361      for (i = 0; i < ns->nsecondary; i++) free(ns->skeys[i].pkey);
2023-10-22T14:19:26,362                    ^
2023-10-22T14:19:27,409   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_dmatrix.o from vendor/easel/esl_dmatrix.c
2023-10-22T14:19:27,411   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_dmatrix.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_dmatrix.o
2023-10-22T14:19:27,566   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_cluster.o from vendor/easel/esl_cluster.c
2023-10-22T14:19:27,569   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_cluster.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_cluster.o
2023-10-22T14:19:27,894   vendor/easel/esl_cluster.c: In function ‘esl_cluster_SingleLinkage’:
2023-10-22T14:19:27,895   vendor/easel/esl_cluster.c:151:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:27,896       for (v = 0; v < n; v++) a[v] = n-v-1; /* initialize by pushing all vertices onto available list (backwards) */
2023-10-22T14:19:27,896                     ^
2023-10-22T14:19:28,157   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_neon.o from vendor/easel/esl_neon.c
2023-10-22T14:19:28,159   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_neon.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_neon.o
2023-10-22T14:19:29,793   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sqio.o from vendor/easel/esl_sqio.c
2023-10-22T14:19:29,794   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_sqio.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sqio.o
2023-10-22T14:19:29,876   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_a2m.o from vendor/easel/esl_msafile_a2m.c
2023-10-22T14:19:29,878   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_msafile_a2m.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_a2m.o
2023-10-22T14:19:30,493   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_psiblast.o from vendor/easel/esl_msafile_psiblast.c
2023-10-22T14:19:30,495   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_msafile_psiblast.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_psiblast.o
2023-10-22T14:19:31,294   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_weibull.o from vendor/easel/esl_weibull.c
2023-10-22T14:19:31,296   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_weibull.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_weibull.o
2023-10-22T14:19:32,223   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_normal.o from vendor/easel/esl_normal.c
2023-10-22T14:19:32,224   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_normal.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_normal.o
2023-10-22T14:19:32,524   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_afa.o from vendor/easel/esl_msafile_afa.c
2023-10-22T14:19:32,526   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_msafile_afa.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_afa.o
2023-10-22T14:19:32,656   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_fileparser.o from vendor/easel/esl_fileparser.c
2023-10-22T14:19:32,658   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_fileparser.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_fileparser.o
2023-10-22T14:19:32,813   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_phylip.o from vendor/easel/esl_msafile_phylip.c
2023-10-22T14:19:32,814   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_msafile_phylip.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_phylip.o
2023-10-22T14:19:33,076   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_quicksort.o from vendor/easel/esl_quicksort.c
2023-10-22T14:19:33,078   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_quicksort.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_quicksort.o
2023-10-22T14:19:33,697   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stack.o from vendor/easel/esl_stack.c
2023-10-22T14:19:33,699   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_stack.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stack.o
2023-10-22T14:19:33,903   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gev.o from vendor/easel/esl_gev.c
2023-10-22T14:19:33,905   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_gev.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gev.o
2023-10-22T14:19:33,939   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_tree.o from vendor/easel/esl_tree.c
2023-10-22T14:19:33,941   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_tree.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_tree.o
2023-10-22T14:19:34,935   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_dsqdata.o from vendor/easel/esl_dsqdata.c
2023-10-22T14:19:34,937   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_dsqdata.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_dsqdata.o
2023-10-22T14:19:35,354   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_stockholm.o from vendor/easel/esl_msafile_stockholm.c
2023-10-22T14:19:35,355   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_msafile_stockholm.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_stockholm.o
2023-10-22T14:19:35,432   vendor/easel/esl_dsqdata.c: In function ‘esl_dsqdata_Open’:
2023-10-22T14:19:35,433   vendor/easel/esl_dsqdata.c:255:21: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:19:35,433          if (alphatype != dd->abc_r->type)
2023-10-22T14:19:35,434                        ^~
2023-10-22T14:19:35,464   vendor/easel/esl_dsqdata.c: In function ‘esl_dsqdata_Write’:
2023-10-22T14:19:35,464   vendor/easel/esl_dsqdata.c:617:17: warning: comparison of integer expressions of different signedness: ‘int64_t’ {aka ‘long long int’} and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:19:35,465          if (sq->n > max_seqlen) max_seqlen = sq->n;
2023-10-22T14:19:35,465                    ^
2023-10-22T14:19:35,465   vendor/easel/esl_dsqdata.c:618:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:35,466          n = strlen(sq->name); if (n > max_namelen) max_namelen = n;
2023-10-22T14:19:35,466                                      ^
2023-10-22T14:19:35,467   vendor/easel/esl_dsqdata.c:619:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:35,468          n = strlen(sq->acc);  if (n > max_acclen)  max_acclen  = n;
2023-10-22T14:19:35,468                                      ^
2023-10-22T14:19:35,469   vendor/easel/esl_dsqdata.c:620:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:35,469          n = strlen(sq->desc); if (n > max_desclen) max_desclen = n;
2023-10-22T14:19:35,470                                      ^
2023-10-22T14:19:35,474   vendor/easel/esl_dsqdata.c:677:53: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:19:35,474          if ( fwrite(psq, sizeof(uint32_t), plen, sfp) != plen)
2023-10-22T14:19:35,475                                                        ^~
2023-10-22T14:19:35,476   vendor/easel/esl_dsqdata.c:683:53: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:19:35,476          if ( fwrite(sq->name, sizeof(char), n+1, mfp) != n+1)
2023-10-22T14:19:35,477                                                        ^~
2023-10-22T14:19:35,477   vendor/easel/esl_dsqdata.c:688:53: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:19:35,478          if ( fwrite(sq->acc,  sizeof(char), n+1, mfp) != n+1)
2023-10-22T14:19:35,479                                                        ^~
2023-10-22T14:19:35,479   vendor/easel/esl_dsqdata.c:693:53: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:19:35,480          if ( fwrite(sq->desc, sizeof(char), n+1, mfp) != n+1)
2023-10-22T14:19:35,480                                                        ^~
2023-10-22T14:19:35,557   vendor/easel/esl_dsqdata.c: In function ‘dsqdata_unpacker_thread’:
2023-10-22T14:19:35,558   vendor/easel/esl_dsqdata.c:1130:1: warning: control reaches end of non-void function [-Wreturn-type]
2023-10-22T14:19:35,559    }
2023-10-22T14:19:35,559    ^
2023-10-22T14:19:35,574   vendor/easel/esl_dsqdata.c: In function ‘dsqdata_loader_thread’:
2023-10-22T14:19:35,574   vendor/easel/esl_dsqdata.c:1053:1: warning: control reaches end of non-void function [-Wreturn-type]
2023-10-22T14:19:35,575    }
2023-10-22T14:19:35,575    ^
2023-10-22T14:19:36,709   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_keyhash.o from vendor/easel/esl_keyhash.c
2023-10-22T14:19:36,712   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_keyhash.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_keyhash.o
2023-10-22T14:19:37,099   vendor/easel/esl_keyhash.c: In function ‘esl_keyhash_Clone’:
2023-10-22T14:19:37,100   vendor/easel/esl_keyhash.c:94:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘const unsigned int’} [-Wsign-compare]
2023-10-22T14:19:37,101      for (h = 0; h < kh->hashsize; h++)
2023-10-22T14:19:37,101                    ^
2023-10-22T14:19:37,102   vendor/easel/esl_keyhash.c: In function ‘esl_keyhash_Reuse’:
2023-10-22T14:19:37,103   vendor/easel/esl_keyhash.c:171:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:37,103      for (i = 0; i < kh->hashsize; i++) kh->hashtable[i] = -1;
2023-10-22T14:19:37,104                    ^
2023-10-22T14:19:37,105   vendor/easel/esl_keyhash.c: In function ‘esl_keyhash_Dump’:
2023-10-22T14:19:37,105   vendor/easel/esl_keyhash.c:215:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘const unsigned int’} [-Wsign-compare]
2023-10-22T14:19:37,105      for (h = 0; h < kh->hashsize; h++)
2023-10-22T14:19:37,106                    ^
2023-10-22T14:19:37,117   vendor/easel/esl_keyhash.c: In function ‘esl_keyhash_Store’:
2023-10-22T14:19:37,117   vendor/easel/esl_keyhash.c:310:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:37,118      if (kh->nkeys > 3*kh->hashsize)
2023-10-22T14:19:37,119                    ^
2023-10-22T14:19:37,119   vendor/easel/esl_keyhash.c: In function ‘keyhash_create’:
2023-10-22T14:19:37,120   vendor/easel/esl_keyhash.c:401:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:37,120      for (i = 0; i < kh->hashsize; i++)  kh->hashtable[i] = -1;
2023-10-22T14:19:37,121                    ^
2023-10-22T14:19:37,121   vendor/easel/esl_keyhash.c: In function ‘key_upsize’:
2023-10-22T14:19:37,122   vendor/easel/esl_keyhash.c:491:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:37,122      for (i = 0; i < kh->hashsize; i++) kh->hashtable[i] = -1;
2023-10-22T14:19:37,123                    ^
2023-10-22T14:19:38,225   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_wuss.o from vendor/easel/esl_wuss.c
2023-10-22T14:19:38,226   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_wuss.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_wuss.o
2023-10-22T14:19:38,937   vendor/easel/esl_wuss.c: In function ‘esl_wuss2ct’:
2023-10-22T14:19:38,938   vendor/easel/esl_wuss.c:136:10: warning: ‘status’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T14:19:38,939      return status;
2023-10-22T14:19:38,939             ^~~~~~
2023-10-22T14:19:39,807   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sq.o from vendor/easel/esl_sq.c
2023-10-22T14:19:39,809   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_sq.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sq.o
2023-10-22T14:19:40,319   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_threads.o from vendor/easel/esl_threads.c
2023-10-22T14:19:40,321   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_threads.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_threads.o
2023-10-22T14:19:40,332   vendor/easel/esl_sq.c: In function ‘esl_sq_Checksum’:
2023-10-22T14:19:40,333   vendor/easel/esl_sq.c:1638:25: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int64_t’ {aka ‘const long long int’} [-Wsign-compare]
2023-10-22T14:19:40,333          for (pos = 0; pos < sq->n; pos++)
2023-10-22T14:19:40,334                            ^
2023-10-22T14:19:40,334   vendor/easel/esl_sq.c:1647:25: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int64_t’ {aka ‘const long long int’} [-Wsign-compare]
2023-10-22T14:19:40,335          for (pos = 1; pos <= sq->n; pos++)
2023-10-22T14:19:40,335                            ^~
2023-10-22T14:19:40,520   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_iset.o from vendor/easel/esl_iset.c
2023-10-22T14:19:40,522   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_iset.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_iset.o
2023-10-22T14:19:40,687   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_scorematrix.o from vendor/easel/esl_scorematrix.c
2023-10-22T14:19:40,689   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_scorematrix.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_scorematrix.o
2023-10-22T14:19:40,854   vendor/easel/esl_iset.c: In function ‘esl_iset_monoCobalt’:
2023-10-22T14:19:40,855   vendor/easel/esl_iset.c:127:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:40,855      for (v = 0; v < n; v++) a[v] = n-v-1; // initialize by putting all vertices into array a
2023-10-22T14:19:40,856                    ^
2023-10-22T14:19:40,857   vendor/easel/esl_iset.c:131:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:40,857      for (j = 0; j < n; j++)
2023-10-22T14:19:40,858                    ^
2023-10-22T14:19:40,858   vendor/easel/esl_iset.c:135:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:40,859          for (i = n; i < n+nb; i++)
2023-10-22T14:19:40,859                        ^
2023-10-22T14:19:40,860   vendor/easel/esl_iset.c: In function ‘esl_iset_biCobalt’:
2023-10-22T14:19:40,861   vendor/easel/esl_iset.c:209:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:40,861      for (v = 0; v < n; v++) a[v] = n-v-1;   // initialize by putting all vertices into an array
2023-10-22T14:19:40,861                    ^
2023-10-22T14:19:40,862   vendor/easel/esl_iset.c:213:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:40,862      for (j = 0; j <n; j++)
2023-10-22T14:19:40,863                    ^
2023-10-22T14:19:40,863   vendor/easel/esl_iset.c:220:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:40,864              for (i = n; i < n+nb1; i++)
2023-10-22T14:19:40,864                            ^
2023-10-22T14:19:40,865   vendor/easel/esl_iset.c:229:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:40,865                  for (i = 2*n; i < 2*n+nb2; i++)
2023-10-22T14:19:40,866                                  ^
2023-10-22T14:19:40,876   vendor/easel/esl_iset.c:253:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:40,877              for (i = 2*n; i < 2*n+nb2; i++)
2023-10-22T14:19:40,878                              ^
2023-10-22T14:19:40,878   vendor/easel/esl_iset.c:262:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:40,879                  for (i = n; i < n+nb1; i++)
2023-10-22T14:19:40,879                                ^
2023-10-22T14:19:40,880   vendor/easel/esl_iset.c:287:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:40,880          for (i = 0; i < n; i++)
2023-10-22T14:19:40,880                        ^
2023-10-22T14:19:40,881   vendor/easel/esl_iset.c: In function ‘esl_iset_monoBlue’:
2023-10-22T14:19:40,882   vendor/easel/esl_iset.c:809:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:40,882      for (i = 0; i < n; i++)
2023-10-22T14:19:40,883                    ^
2023-10-22T14:19:40,883   vendor/easel/esl_iset.c: In function ‘esl_iset_biBlue’:
2023-10-22T14:19:40,884   vendor/easel/esl_iset.c:1011:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:40,884      for (i = 0; i < n; i++)
2023-10-22T14:19:40,885                    ^
2023-10-22T14:19:40,885   vendor/easel/esl_iset.c:1018:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:40,886      for (i = 0; i < n; i++)  elig[i]=3;
2023-10-22T14:19:40,897                    ^
2023-10-22T14:19:40,897   vendor/easel/esl_iset.c:1033:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:40,898          for (i = 0; i < n; i++)
2023-10-22T14:19:40,898                        ^
2023-10-22T14:19:40,899   vendor/easel/esl_iset.c: In function ‘esl_iset_biRandom’:
2023-10-22T14:19:40,900   vendor/easel/esl_iset.c:1089:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:40,901      for (i = 0; i < n; i++)
2023-10-22T14:19:40,901                    ^
2023-10-22T14:19:40,902   vendor/easel/esl_iset.c:1095:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:40,902      for (i = 0; i < n; i++)
2023-10-22T14:19:40,903                    ^
2023-10-22T14:19:40,903   vendor/easel/esl_iset.c:1100:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:40,904              for (j = 0; j < n; j++)
2023-10-22T14:19:40,904                            ^
2023-10-22T14:19:40,905   vendor/easel/esl_iset.c: In function ‘esl_iset_monoValidate’:
2023-10-22T14:19:40,905   vendor/easel/esl_iset.c:1173:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:40,906       for (i = 0; i < n; i++)
2023-10-22T14:19:40,906                     ^
2023-10-22T14:19:40,917   vendor/easel/esl_iset.c:1175:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:40,917           for (j = i+1; j < n; j++)
2023-10-22T14:19:40,918                           ^
2023-10-22T14:19:40,918   vendor/easel/esl_iset.c: In function ‘esl_iset_biValidate’:
2023-10-22T14:19:40,919   vendor/easel/esl_iset.c:1218:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:40,919       for (i = 0; i < n; i++)
2023-10-22T14:19:40,920                     ^
2023-10-22T14:19:40,920   vendor/easel/esl_iset.c:1220:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:40,921           for (j = i+1; j < n; j++)
2023-10-22T14:19:40,921                           ^
2023-10-22T14:19:40,922   vendor/easel/esl_iset.c:1230:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:40,922       for (i = 0; i < n; i++)
2023-10-22T14:19:40,923                     ^
2023-10-22T14:19:42,220   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_hyperexp.o from vendor/easel/esl_hyperexp.c
2023-10-22T14:19:42,222   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_hyperexp.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_hyperexp.o
2023-10-22T14:19:43,203   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_regexp.o from vendor/easel/esl_regexp.c
2023-10-22T14:19:43,205   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_regexp.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_regexp.o
2023-10-22T14:19:44,862   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_lognormal.o from vendor/easel/esl_lognormal.c
2023-10-22T14:19:44,864   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_lognormal.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_lognormal.o
2023-10-22T14:19:44,959   vendor/easel/esl_regexp.c: In function ‘regbranch’:
2023-10-22T14:19:44,960   vendor/easel/esl_regexp.c:793:6: warning: ‘flags’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T14:19:44,960     int flags;
2023-10-22T14:19:44,961         ^~~~~
2023-10-22T14:19:45,333   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msa.o from vendor/easel/esl_msa.c
2023-10-22T14:19:45,335   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_msa.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msa.o
2023-10-22T14:19:45,674   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gencode.o from vendor/easel/esl_gencode.c
2023-10-22T14:19:45,675   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_gencode.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gencode.o
2023-10-22T14:19:46,055   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sqio_ncbi.o from vendor/easel/esl_sqio_ncbi.c
2023-10-22T14:19:46,057   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_sqio_ncbi.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sqio_ncbi.o
2023-10-22T14:19:46,470   vendor/easel/esl_sqio_ncbi.c: In function ‘sqncbi_ParseIndexFile’:
2023-10-22T14:19:46,471   vendor/easel/esl_sqio_ncbi.c:216:24: warning: comparison of integer expressions of different signedness: ‘__uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:19:46,472      if (htobe32(info[1]) != dbtype)                             status = eslEUNIMPLEMENTED;
2023-10-22T14:19:46,472                           ^~
2023-10-22T14:19:46,473   vendor/easel/esl_sqio_ncbi.c:226:58: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:19:46,473      if (fread(ncbi->title, sizeof(char), len, ncbi->fppin) != len) { status = eslFAIL; goto ERROR; }
2023-10-22T14:19:46,474                                                             ^~
2023-10-22T14:19:46,474   vendor/easel/esl_sqio_ncbi.c:233:62: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:19:46,475      if (fread(ncbi->timestamp, sizeof(char), len, ncbi->fppin) != len) { status = eslFAIL; goto ERROR; }
2023-10-22T14:19:46,475                                                                 ^~
2023-10-22T14:19:46,497   vendor/easel/esl_sqio_ncbi.c: In function ‘sqncbi_Read’:
2023-10-22T14:19:46,498   vendor/easel/esl_sqio_ncbi.c:758:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:46,499      if (ncbi->index >= ncbi->num_seq) return eslEOF;
2023-10-22T14:19:46,499                      ^~
2023-10-22T14:19:46,501   vendor/easel/esl_sqio_ncbi.c: In function ‘sqncbi_ReadInfo’:
2023-10-22T14:19:46,502   vendor/easel/esl_sqio_ncbi.c:809:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:46,502      if (ncbi->index >= ncbi->num_seq) return eslEOF;
2023-10-22T14:19:46,503                      ^~
2023-10-22T14:19:46,503   vendor/easel/esl_sqio_ncbi.c: In function ‘sqncbi_ReadSequence’:
2023-10-22T14:19:46,504   vendor/easel/esl_sqio_ncbi.c:860:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:46,504      if (ncbi->index >= ncbi->num_seq) return eslEOF;
2023-10-22T14:19:46,505                      ^~
2023-10-22T14:19:46,514   vendor/easel/esl_sqio_ncbi.c: In function ‘sqncbi_ReadWindow’:
2023-10-22T14:19:46,515   vendor/easel/esl_sqio_ncbi.c:1036:33: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:19:46,516        if (status != eslOK || nres != W) {
2023-10-22T14:19:46,516                                    ^~
2023-10-22T14:19:46,517   vendor/easel/esl_sqio_ncbi.c:1059:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:46,518          if (ncbi->index >= ncbi->num_seq) return eslEOF;
2023-10-22T14:19:46,518                          ^~
2023-10-22T14:19:46,540   vendor/easel/esl_sqio_ncbi.c: In function ‘volume_open’:
2023-10-22T14:19:46,540   vendor/easel/esl_sqio_ncbi.c:1421:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:46,541      if (volume < 0 || volume > ncbi->volumes) return eslEINVAL;
2023-10-22T14:19:46,541                               ^
2023-10-22T14:19:46,548   vendor/easel/esl_sqio_ncbi.c:1458:24: warning: comparison of integer expressions of different signedness: ‘__uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:19:46,549      if (htobe32(info[1]) != dbtype)                             status = eslEFORMAT;
2023-10-22T14:19:46,549                           ^~
2023-10-22T14:19:46,551   vendor/easel/esl_sqio_ncbi.c: In function ‘pos_sequence’:
2023-10-22T14:19:46,552   vendor/easel/esl_sqio_ncbi.c:1513:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:46,552      if (inx < 0 || inx > ncbi->num_seq) return eslEINVAL;
2023-10-22T14:19:46,553                         ^
2023-10-22T14:19:46,554   vendor/easel/esl_sqio_ncbi.c:1519:25: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:19:46,554      if (ncbi->index_start == -1 || inx < start || inx > end) {
2023-10-22T14:19:46,555                            ^~
2023-10-22T14:19:46,555   vendor/easel/esl_sqio_ncbi.c:1519:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:46,555      if (ncbi->index_start == -1 || inx < start || inx > end) {
2023-10-22T14:19:46,556                                         ^
2023-10-22T14:19:46,557   vendor/easel/esl_sqio_ncbi.c:1519:53: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:46,557      if (ncbi->index_start == -1 || inx < start || inx > end) {
2023-10-22T14:19:46,558                                                        ^
2023-10-22T14:19:46,558   vendor/easel/esl_sqio_ncbi.c:1524:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:46,559          if (inx < volume->start_seq || inx > volume->end_seq) {
2023-10-22T14:19:46,559                  ^
2023-10-22T14:19:46,560   vendor/easel/esl_sqio_ncbi.c:1524:42: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:46,560          if (inx < volume->start_seq || inx > volume->end_seq) {
2023-10-22T14:19:46,561                                             ^
2023-10-22T14:19:46,561   vendor/easel/esl_sqio_ncbi.c:1526:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:46,562     for (cnt = 0; cnt < ncbi->volumes; ++cnt) {
2023-10-22T14:19:46,562                       ^
2023-10-22T14:19:46,563   vendor/easel/esl_sqio_ncbi.c:1527:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:46,563       if (inx < volume->end_seq) break;
2023-10-22T14:19:46,563               ^
2023-10-22T14:19:46,564   vendor/easel/esl_sqio_ncbi.c:1532:10: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:46,564     if (cnt >= ncbi->volumes) return eslFAIL;
2023-10-22T14:19:46,565             ^~
2023-10-22T14:19:46,565   vendor/easel/esl_sqio_ncbi.c:1539:27: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:19:46,565        if (ncbi->index_start == -1 || inx > end) {
2023-10-22T14:19:46,566                              ^~
2023-10-22T14:19:46,576   vendor/easel/esl_sqio_ncbi.c:1539:40: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:46,577        if (ncbi->index_start == -1 || inx > end) {
2023-10-22T14:19:46,578                                           ^
2023-10-22T14:19:46,578   vendor/easel/esl_sqio_ncbi.c:1564:70: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:19:46,579        if (fread(ncbi->hdr_indexes, sizeof(uint32_t), cnt, ncbi->fppin) != cnt) {
2023-10-22T14:19:46,579                                                                         ^~
2023-10-22T14:19:46,580   vendor/easel/esl_sqio_ncbi.c:1572:70: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:19:46,580        if (fread(ncbi->seq_indexes, sizeof(uint32_t), cnt, ncbi->fppin) != cnt) {
2023-10-22T14:19:46,581                                                                         ^~
2023-10-22T14:19:46,581   vendor/easel/esl_sqio_ncbi.c:1581:72: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:19:46,582          if (fread(ncbi->amb_indexes, sizeof(uint32_t), cnt, ncbi->fppin) != cnt) {
2023-10-22T14:19:46,582                                                                           ^~
2023-10-22T14:19:46,582   vendor/easel/esl_sqio_ncbi.c: In function ‘read_amino’:
2023-10-22T14:19:46,583   vendor/easel/esl_sqio_ncbi.c:1623:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:46,583      if (ncbi->index >= ncbi->num_seq) return eslEOF;
2023-10-22T14:19:46,584                      ^~
2023-10-22T14:19:46,584   vendor/easel/esl_sqio_ncbi.c:1633:53: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:19:46,584        if (fread(ptr, sizeof(char), size, ncbi->fppsq) != size) return eslEFORMAT;
2023-10-22T14:19:46,585                                                        ^~
2023-10-22T14:19:46,585   vendor/easel/esl_sqio_ncbi.c:1641:53: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:19:46,586        if (fread(ptr, sizeof(char), size, ncbi->fppsq) != size) return eslEFORMAT;
2023-10-22T14:19:46,586                                                        ^~
2023-10-22T14:19:46,597   vendor/easel/esl_sqio_ncbi.c: In function ‘read_dna’:
2023-10-22T14:19:46,598   vendor/easel/esl_sqio_ncbi.c:1690:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:46,598      if (ncbi->index >= ncbi->num_seq) return eslEOF;
2023-10-22T14:19:46,598                      ^~
2023-10-22T14:19:46,599   vendor/easel/esl_sqio_ncbi.c:1701:61: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:19:46,599      if (fread(ncbi->hdr_buf, sizeof(char), size, ncbi->fppsq) != size) return eslEFORMAT;
2023-10-22T14:19:46,600                                                                ^~
2023-10-22T14:19:46,600   vendor/easel/esl_sqio_ncbi.c:1754:33: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare]
2023-10-22T14:19:46,601      if (ncbi->seq_apos - sq->doff < size) {
2023-10-22T14:19:46,601                                    ^
2023-10-22T14:19:46,602   vendor/easel/esl_sqio_ncbi.c: In function ‘read_nres_amino’:
2023-10-22T14:19:46,602   vendor/easel/esl_sqio_ncbi.c:1831:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:46,603      if (ncbi->index >= ncbi->num_seq) return eslEOF;
2023-10-22T14:19:46,603                      ^~
2023-10-22T14:19:46,604   vendor/easel/esl_sqio_ncbi.c:1856:51: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:19:46,604      if (fread(ptr, sizeof(char), size, ncbi->fppsq) != size) return eslEFORMAT;
2023-10-22T14:19:46,604                                                      ^~
2023-10-22T14:19:46,616   vendor/easel/esl_sqio_ncbi.c: In function ‘read_nres_dna’:
2023-10-22T14:19:46,617   vendor/easel/esl_sqio_ncbi.c:2005:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:46,618      if (ncbi->index >= ncbi->num_seq) return eslEOF;
2023-10-22T14:19:46,618                      ^~
2023-10-22T14:19:46,620   vendor/easel/esl_sqio_ncbi.c:2047:62: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:19:46,621      if (fread(ncbi->hdr_buf, sizeof(char), ssize, ncbi->fppsq) != ssize) return eslEFORMAT;
2023-10-22T14:19:46,621                                                                 ^~
2023-10-22T14:19:46,634   vendor/easel/esl_sqio_ncbi.c: In function ‘inmap_ncbi_dna’:
2023-10-22T14:19:46,635   vendor/easel/esl_sqio_ncbi.c:2178:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:46,636      for (x = 0; x < strlen(ncbisym); ++x) {
2023-10-22T14:19:46,636                    ^
2023-10-22T14:19:46,637   vendor/easel/esl_sqio_ncbi.c:2179:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:46,637        for (y = 0; y < strlen(abc->sym); ++y) {
2023-10-22T14:19:46,638                      ^
2023-10-22T14:19:46,638   vendor/easel/esl_sqio_ncbi.c:2187:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:46,639        if (y >= strlen(abc->sym)) return eslEFORMAT;
2023-10-22T14:19:46,640              ^~
2023-10-22T14:19:46,641   vendor/easel/esl_sqio_ncbi.c: In function ‘inmap_ncbi_amino’:
2023-10-22T14:19:46,641   vendor/easel/esl_sqio_ncbi.c:2226:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:46,642      for (x = 0; x < strlen(ncbisym); ++x) {
2023-10-22T14:19:46,643                    ^
2023-10-22T14:19:46,643   vendor/easel/esl_sqio_ncbi.c:2227:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:46,644        for (y = 0; y < strlen(abc->sym); ++y) {
2023-10-22T14:19:46,644                      ^
2023-10-22T14:19:46,645   vendor/easel/esl_sqio_ncbi.c:2235:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:19:46,645        if (y >= strlen(abc->sym)) return eslEFORMAT;
2023-10-22T14:19:46,646              ^~
2023-10-22T14:19:46,652   vendor/easel/esl_sqio_ncbi.c: In function ‘parse_header’:
2023-10-22T14:19:46,653   vendor/easel/esl_sqio_ncbi.c:2463:61: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:19:46,653      if (fread(ncbi->hdr_buf, sizeof(char), size, ncbi->fpphr) != size) return eslEFORMAT;
2023-10-22T14:19:46,654                                                                ^~
2023-10-22T14:19:47,252   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_json.o from vendor/easel/esl_json.c
2023-10-22T14:19:47,253   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_json.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_json.o
2023-10-22T14:19:48,469   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_recorder.o from vendor/easel/esl_recorder.c
2023-10-22T14:19:48,471   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_recorder.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_recorder.o
2023-10-22T14:19:53,038   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_alphabet.o from vendor/easel/esl_alphabet.c
2023-10-22T14:19:53,040   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_alphabet.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_alphabet.o
2023-10-22T14:19:53,344   vendor/easel/esl_alphabet.c: In function ‘esl_alphabet_CreateCustom’:
2023-10-22T14:19:53,346   vendor/easel/esl_alphabet.c:107:24: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:19:53,346      if (strlen(alphabet) != Kp) ESL_XEXCEPTION(eslEINVAL, "alphabet length != Kp");
2023-10-22T14:19:53,347                           ^~
2023-10-22T14:19:55,012   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_matrixops.o from vendor/easel/esl_matrixops.c
2023-10-22T14:19:55,014   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_matrixops.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_matrixops.o
2023-10-22T14:19:56,389   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mixgev.o from vendor/easel/esl_mixgev.c
2023-10-22T14:19:56,391   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_mixgev.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mixgev.o
2023-10-22T14:19:56,616   generating build/temp.linux-armv7l-cpython-37/build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.o from build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c
2023-10-22T14:19:56,618   creating build/temp.linux-armv7l-cpython-37/build
2023-10-22T14:19:56,619   creating build/temp.linux-armv7l-cpython-37/build/temp.linux-armv7l-cpython-37
2023-10-22T14:19:56,621   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c -o build/temp.linux-armv7l-cpython-37/build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.o
2023-10-22T14:19:57,077   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c: In function ‘sqascii_Echo’:
2023-10-22T14:19:57,078   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1671:60: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:19:57,078          if (fwrite(ascii->buf, sizeof(char), ascii->nc, ofp) != ascii->nc) ESL_EXCEPTION(eslESYS, "fwrite() failed");
2023-10-22T14:19:57,079                                                               ^~
2023-10-22T14:19:58,051   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_ratematrix.o from vendor/easel/esl_ratematrix.c
2023-10-22T14:19:58,053   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_ratematrix.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_ratematrix.o
2023-10-22T14:19:59,506   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_arr2.o from vendor/easel/esl_arr2.c
2023-10-22T14:19:59,508   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_arr2.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_arr2.o
2023-10-22T14:20:02,794   arm-linux-gnueabihf-gcc-ar rcs build/temp.linux-armv7l-cpython-37/libeasel.a build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mixdchlet.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_minimizer.o build/temp.linux-armv7l-cpython-37/vendor/easel/easel.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_clustal.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sse.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_vmx.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_distance.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_dirichlet.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mpi.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stretchexp.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_huffman.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_swat.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_graph.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_randomseq.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_selex.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_avx.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msashuffle.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_bitfield.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_hmm.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_red_black.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_composition.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msacluster.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_cpu.o build/temp.linux-armv7l-cpython-37/vendor/easel/interface_lapack.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_alloc.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_varint.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stopwatch.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_subcmd.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_paml.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_heap.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_histogram.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_vectorops.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile2.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sqio.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_normal.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_phylip.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_arr3.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_avx512.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mem.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gumbel.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msaweight.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_rootfinder.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_exponential.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_workqueue.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_getopts.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_rand64.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stats.o build/temp.linux-armv7l-cpython-37/vendor/easel/interface_gsl.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_random.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gamma.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_buffer.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_ssi.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_psiblast.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_dmatrix.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_weibull.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_fileparser.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gev.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_stockholm.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_hyperexp.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_cluster.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_neon.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_a2m.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_quicksort.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stack.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_dsqdata.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_afa.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_tree.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_threads.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_iset.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_regexp.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_json.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_keyhash.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_wuss.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_scorematrix.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_lognormal.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gencode.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_recorder.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sq.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sqio_ncbi.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_alphabet.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mixgev.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_ratematrix.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_arr2.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msa.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_matrixops.o build/temp.linux-armv7l-cpython-37/build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.o
2023-10-22T14:20:03,315   generating build/temp.linux-armv7l-cpython-37/libhmmer.a from vendor/hmmer/src/build.c, vendor/hmmer/src/cachedb.c, vendor/hmmer/src/cachedb_shard.c, vendor/hmmer/src/emit.c, vendor/hmmer/src/errors.c, vendor/hmmer/src/evalues.c, vendor/hmmer/src/eweight.c, vendor/hmmer/src/generic_decoding.c, vendor/hmmer/src/generic_fwdback.c, vendor/hmmer/src/generic_fwdback_chk.c, vendor/hmmer/src/generic_fwdback_banded.c, vendor/hmmer/src/generic_null2.c, vendor/hmmer/src/generic_msv.c, vendor/hmmer/src/generic_optacc.c, vendor/hmmer/src/generic_stotrace.c, vendor/hmmer/src/generic_viterbi.c, vendor/hmmer/src/generic_vtrace.c, vendor/hmmer/src/h2_io.c, vendor/hmmer/src/heatmap.c, vendor/hmmer/src/hmmlogo.c, vendor/hmmer/src/hmmdmstr.c, vendor/hmmer/src/hmmdmstr_shard.c, vendor/hmmer/src/hmmd_search_status.c, vendor/hmmer/src/hmmdwrkr.c, vendor/hmmer/src/hmmdwrkr_shard.c, vendor/hmmer/src/hmmdutils.c, vendor/hmmer/src/hmmer.c, vendor/hmmer/src/logsum.c, vendor/hmmer/src/modelconfig.c, vendor/hmmer/src/modelstats.c, vendor/hmmer/src/mpisupport.c, vendor/hmmer/src/seqmodel.c, vendor/hmmer/src/tracealign.c, vendor/hmmer/src/p7_alidisplay.c, vendor/hmmer/src/p7_bg.c, vendor/hmmer/src/p7_builder.c, vendor/hmmer/src/p7_domain.c, vendor/hmmer/src/p7_domaindef.c, vendor/hmmer/src/p7_gbands.c, vendor/hmmer/src/p7_gmx.c, vendor/hmmer/src/p7_gmxb.c, vendor/hmmer/src/p7_gmxchk.c, vendor/hmmer/src/p7_hit.c, vendor/hmmer/src/p7_hmm.c, vendor/hmmer/src/p7_hmmcache.c, vendor/hmmer/src/p7_hmmd_search_stats.c, vendor/hmmer/src/p7_hmmfile.c, vendor/hmmer/src/p7_hmmwindow.c, vendor/hmmer/src/p7_pipeline.c, vendor/hmmer/src/p7_prior.c, vendor/hmmer/src/p7_profile.c, vendor/hmmer/src/p7_spensemble.c, vendor/hmmer/src/p7_tophits.c, vendor/hmmer/src/p7_trace.c, vendor/hmmer/src/p7_scoredata.c, vendor/hmmer/src/hmmpgmd2msa.c, vendor/hmmer/src/fm_alphabet.c, vendor/hmmer/src/fm_general.c, vendor/hmmer/src/fm_sse.c, vendor/hmmer/src/fm_ssv.c
2023-10-22T14:20:03,316   generating build/temp.linux-armv7l-cpython-37/p7_hmmfile.c from vendor/hmmer/src/p7_hmmfile.c
2023-10-22T14:20:03,346   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/build.o from vendor/hmmer/src/build.c
2023-10-22T14:20:03,348   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_viterbi.o from vendor/hmmer/src/generic_viterbi.c
2023-10-22T14:20:03,350   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/evalues.o from vendor/hmmer/src/evalues.c
2023-10-22T14:20:03,350   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_fwdback_banded.o from vendor/hmmer/src/generic_fwdback_banded.c
2023-10-22T14:20:03,352   creating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src
2023-10-22T14:20:03,352   creating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src
2023-10-22T14:20:03,353   creating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src
2023-10-22T14:20:03,353   creating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src
2023-10-22T14:20:03,353   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/build.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/build.o
2023-10-22T14:20:03,355   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/generic_fwdback_banded.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_fwdback_banded.o
2023-10-22T14:20:03,377   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/generic_viterbi.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_viterbi.o
2023-10-22T14:20:03,380   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/evalues.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/evalues.o
2023-10-22T14:20:05,024   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_null2.o from vendor/hmmer/src/generic_null2.c
2023-10-22T14:20:05,026   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/generic_null2.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_null2.o
2023-10-22T14:20:05,552   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_vtrace.o from vendor/hmmer/src/generic_vtrace.c
2023-10-22T14:20:05,554   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/generic_vtrace.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_vtrace.o
2023-10-22T14:20:05,625   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/eweight.o from vendor/hmmer/src/eweight.c
2023-10-22T14:20:05,626   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/eweight.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/eweight.o
2023-10-22T14:20:05,803   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/cachedb.o from vendor/hmmer/src/cachedb.c
2023-10-22T14:20:05,805   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/cachedb.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/cachedb.o
2023-10-22T14:20:06,853   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_msv.o from vendor/hmmer/src/generic_msv.c
2023-10-22T14:20:06,855   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/generic_msv.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_msv.o
2023-10-22T14:20:06,936   vendor/hmmer/src/cachedb.c: In function ‘p7_seqcache_Open’:
2023-10-22T14:20:06,937   vendor/hmmer/src/cachedb.c:95:14: warning: comparison of integer expressions of different signedness: ‘int32_t’ {aka ‘int’} and ‘unsigned int’ [-Wsign-compare]
2023-10-22T14:20:06,938      if (db_cnt > (sizeof(db_inx)/sizeof(db_inx[0])))      return eslEFORMAT;
2023-10-22T14:20:06,938                 ^
2023-10-22T14:20:06,947   vendor/hmmer/src/cachedb.c:157:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:06,948        if (inx >= seq_cnt)       { printf("inx: %d\n", inx); return eslEFORMAT; }
2023-10-22T14:20:06,949                ^~
2023-10-22T14:20:06,950   vendor/hmmer/src/cachedb.c:158:19: warning: comparison of integer expressions of different signedness: ‘int64_t’ {aka ‘long long int’} and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:06,951        if (sq->n + 1 > res_size) { printf("inx: %d size %d %d\n", inx, (int)sq->n + 1, (int)res_size); return eslEFORMAT; }
2023-10-22T14:20:06,951                      ^
2023-10-22T14:20:06,953   vendor/hmmer/src/cachedb.c:179:16: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:06,954        if (db_key >= (1 << (db_cnt + 1))) { printf("inx: %d db %d %s\n", inx, db_key, sq->desc); return eslEFORMAT; }
2023-10-22T14:20:06,954                   ^~
2023-10-22T14:20:06,957   vendor/hmmer/src/cachedb.c:212:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:06,958      if (inx != seq_cnt) { printf("inx:: %d %" PRIu64 "\n", inx, seq_cnt);  return eslEFORMAT; }
2023-10-22T14:20:06,958              ^~
2023-10-22T14:20:06,960   vendor/hmmer/src/cachedb.c:222:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:06,961      for (i = 0 ; i < seq_cnt; ++i) {
2023-10-22T14:20:06,961                     ^
2023-10-22T14:20:06,962   vendor/hmmer/src/cachedb.c:230:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:06,963      for (i = 0 ; i < seq_cnt; ++i) {
2023-10-22T14:20:06,963                     ^
2023-10-22T14:20:06,965   vendor/hmmer/src/cachedb.c:236:25: warning: comparison of integer expressions of different signedness: ‘int32_t’ {aka ‘int’} and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:06,966            if (db_inx[inx] >= db->count) { printf("sort:: %d %d\n", db_inx[inx], db->count); return eslEFORMAT; }
2023-10-22T14:20:06,966                            ^~
2023-10-22T14:20:06,968   vendor/hmmer/src/cachedb.c:246:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:06,969      for (i = 0; i < cache->db_cnt; ++i) {
2023-10-22T14:20:06,969                    ^
2023-10-22T14:20:06,973   vendor/hmmer/src/cachedb.c: In function ‘p7_seqcache_Close’:
2023-10-22T14:20:06,974   vendor/hmmer/src/cachedb.c:284:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:06,974          for (i = 0; i < cache->db_cnt; ++i) {
2023-10-22T14:20:06,975                        ^
2023-10-22T14:20:07,151   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_decoding.o from vendor/hmmer/src/generic_decoding.c
2023-10-22T14:20:07,153   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/generic_decoding.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_decoding.o
2023-10-22T14:20:07,633   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/h2_io.o from vendor/hmmer/src/h2_io.c
2023-10-22T14:20:07,635   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/h2_io.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/h2_io.o
2023-10-22T14:20:08,387   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/cachedb_shard.o from vendor/hmmer/src/cachedb_shard.c
2023-10-22T14:20:08,389   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/cachedb_shard.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/cachedb_shard.o
2023-10-22T14:20:08,739   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_optacc.o from vendor/hmmer/src/generic_optacc.c
2023-10-22T14:20:08,741   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/generic_optacc.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_optacc.o
2023-10-22T14:20:08,846   vendor/hmmer/src/h2_io.c: In function ‘h2_multiline’:
2023-10-22T14:20:08,847   vendor/hmmer/src/h2_io.c:213:40: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:08,848     if (fwrite(sptr, sizeof(char), n, fp) != n) ESL_EXCEPTION_SYS(eslEWRITE, "h2 profile write failed");   /* using fwrite lets us write fixed # of chars   */
2023-10-22T14:20:08,849                                           ^~
2023-10-22T14:20:08,936   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_fwdback.o from vendor/hmmer/src/generic_fwdback.c
2023-10-22T14:20:08,937   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/generic_fwdback.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_fwdback.o
2023-10-22T14:20:09,539   vendor/hmmer/src/cachedb_shard.c: In function ‘p7_seqcache_Open_master’:
2023-10-22T14:20:09,540   vendor/hmmer/src/cachedb_shard.c:117:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:09,540      for (i = 0; i < db_cnt; ++i) {
2023-10-22T14:20:09,541                    ^
2023-10-22T14:20:09,544   vendor/hmmer/src/cachedb_shard.c:159:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:09,544      for (i = 0; i < db_cnt; ++i) db_inx[i] = 0;
2023-10-22T14:20:09,545                    ^
2023-10-22T14:20:09,546   vendor/hmmer/src/cachedb_shard.c:167:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:09,546        if (inx >= seq_cnt)       { printf("inx: %d\n", inx); return eslEFORMAT; }
2023-10-22T14:20:09,547                ^~
2023-10-22T14:20:09,547   vendor/hmmer/src/cachedb_shard.c:191:16: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:09,548        if (db_key >= (1 << (db_cnt + 1))) { printf("inx: %d db_cnt %d db %d %s\n", inx, db_cnt, db_key, sq->desc); return eslEFORMAT; }
2023-10-22T14:20:09,548                   ^~
2023-10-22T14:20:09,549   vendor/hmmer/src/cachedb_shard.c:225:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:09,550      if (inx != seq_cnt) { printf("inx:: %d %" PRIu64 "\n", inx, seq_cnt);  return eslEFORMAT; }
2023-10-22T14:20:09,550              ^~
2023-10-22T14:20:09,551   vendor/hmmer/src/cachedb_shard.c:235:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:09,551      for (i = 0 ; i < seq_cnt; ++i) {
2023-10-22T14:20:09,552                     ^
2023-10-22T14:20:09,552   vendor/hmmer/src/cachedb_shard.c:243:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:09,553      for (i = 0 ; i < seq_cnt; ++i) {
2023-10-22T14:20:09,553                     ^
2023-10-22T14:20:09,554   vendor/hmmer/src/cachedb_shard.c:259:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:09,554      for (i = 0; i < cache->db_cnt; ++i) {
2023-10-22T14:20:09,555                    ^
2023-10-22T14:20:09,555   vendor/hmmer/src/cachedb_shard.c:282:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:09,556      for (i = 0; i < db_cnt; ++i) {
2023-10-22T14:20:09,556                    ^
2023-10-22T14:20:09,567   vendor/hmmer/src/cachedb_shard.c: In function ‘p7_seqcache_Close_master’:
2023-10-22T14:20:09,567   vendor/hmmer/src/cachedb_shard.c:297:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:09,568          for (i = 0; i < cache->db_cnt; ++i) {
2023-10-22T14:20:09,569                        ^
2023-10-22T14:20:09,569   vendor/hmmer/src/cachedb_shard.c: In function ‘p7_seqcache_Open_shard’:
2023-10-22T14:20:09,570   vendor/hmmer/src/cachedb_shard.c:388:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:09,570      for (i = 0; i < db_cnt; ++i) {
2023-10-22T14:20:09,571                    ^
2023-10-22T14:20:09,571   vendor/hmmer/src/cachedb_shard.c:398:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:09,572      for (i = 0; i < db_cnt; i++){
2023-10-22T14:20:09,572                    ^
2023-10-22T14:20:09,573   vendor/hmmer/src/cachedb_shard.c:434:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:09,573      for (i = 0; i < db_cnt; ++i) db_inx[i] = 0;
2023-10-22T14:20:09,574                    ^
2023-10-22T14:20:09,574   vendor/hmmer/src/cachedb_shard.c:445:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:09,575        if (inx >= seq_cnt)       { printf("inx: %d\n", inx); return eslEFORMAT; }
2023-10-22T14:20:09,575                ^~
2023-10-22T14:20:09,576   vendor/hmmer/src/cachedb_shard.c:446:19: warning: comparison of integer expressions of different signedness: ‘int64_t’ {aka ‘long long int’} and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:09,587        if (sq->n + 1 > res_size) { printf("inx: %d size %d %d\n", inx, (int)sq->n + 1, (int)res_size); return eslEFORMAT; }
2023-10-22T14:20:09,588                      ^
2023-10-22T14:20:09,588   vendor/hmmer/src/cachedb_shard.c:463:41: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:09,589            if(db_seq_count[i] % num_shards == my_shard){ //this sequence is part of database i and belongs to this node's shard
2023-10-22T14:20:09,590                                            ^~
2023-10-22T14:20:09,591   vendor/hmmer/src/cachedb_shard.c:475:16: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:09,591        if (db_key >= (1 << (db_cnt + 1))) { printf("inx: %d db %d %s\n", inx, db_key, sq->desc); return eslEFORMAT; }
2023-10-22T14:20:09,592                   ^~
2023-10-22T14:20:09,592   vendor/hmmer/src/cachedb_shard.c:544:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:09,593      for(i = 0; i < db_cnt; i++){
2023-10-22T14:20:09,593                   ^
2023-10-22T14:20:09,594   vendor/hmmer/src/cachedb_shard.c:560:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:09,594      for (i = 0 ; i < seq_cnt; ++i) {
2023-10-22T14:20:09,595                     ^
2023-10-22T14:20:09,595   vendor/hmmer/src/cachedb_shard.c:568:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:09,596      for (i = 0 ; i < seq_cnt; ++i) {
2023-10-22T14:20:09,607                     ^
2023-10-22T14:20:09,607   vendor/hmmer/src/cachedb_shard.c:585:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:09,608      for (i = 0; i < cache->db_cnt; ++i) {
2023-10-22T14:20:09,608                    ^
2023-10-22T14:20:09,609   vendor/hmmer/src/cachedb_shard.c:615:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:09,609      for (i = 0; i < db_cnt; ++i) {
2023-10-22T14:20:09,610                    ^
2023-10-22T14:20:10,003   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/heatmap.o from vendor/hmmer/src/heatmap.c
2023-10-22T14:20:10,005   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/heatmap.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/heatmap.o
2023-10-22T14:20:10,641   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmlogo.o from vendor/hmmer/src/hmmlogo.c
2023-10-22T14:20:10,643   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/hmmlogo.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmlogo.o
2023-10-22T14:20:11,254   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_fwdback_chk.o from vendor/hmmer/src/generic_fwdback_chk.c
2023-10-22T14:20:11,256   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/generic_fwdback_chk.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_fwdback_chk.o
2023-10-22T14:20:11,568   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_stotrace.o from vendor/hmmer/src/generic_stotrace.c
2023-10-22T14:20:11,570   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/generic_stotrace.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_stotrace.o
2023-10-22T14:20:12,249   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/emit.o from vendor/hmmer/src/emit.c
2023-10-22T14:20:12,251   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/emit.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/emit.o
2023-10-22T14:20:12,988   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdmstr.o from vendor/hmmer/src/hmmdmstr.c
2023-10-22T14:20:12,990   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/hmmdmstr.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdmstr.o
2023-10-22T14:20:13,027   vendor/hmmer/src/generic_stotrace.c: In function ‘p7_GStochasticTrace’:
2023-10-22T14:20:13,028   vendor/hmmer/src/generic_stotrace.c:175:44: warning: ‘scur’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T14:20:13,029          if ( (scur == p7T_N || scur == p7T_J || scur == p7T_C) && scur == sprv) i--;
2023-10-22T14:20:13,029               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2023-10-22T14:20:13,179   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdmstr_shard.o from vendor/hmmer/src/hmmdmstr_shard.c
2023-10-22T14:20:13,181   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/hmmdmstr_shard.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdmstr_shard.o
2023-10-22T14:20:13,388   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmd_search_status.o from vendor/hmmer/src/hmmd_search_status.c
2023-10-22T14:20:13,390   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/hmmd_search_status.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmd_search_status.o
2023-10-22T14:20:13,571   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdutils.o from vendor/hmmer/src/hmmdutils.c
2023-10-22T14:20:13,573   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/hmmdutils.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdutils.o
2023-10-22T14:20:13,765   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmer.o from vendor/hmmer/src/hmmer.c
2023-10-22T14:20:13,768   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/hmmer.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmer.o
2023-10-22T14:20:14,999   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/errors.o from vendor/hmmer/src/errors.c
2023-10-22T14:20:15,001   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/errors.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/errors.o
2023-10-22T14:20:15,036   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdwrkr.o from vendor/hmmer/src/hmmdwrkr.c
2023-10-22T14:20:15,038   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/hmmdwrkr.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdwrkr.o
2023-10-22T14:20:15,254   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdwrkr_shard.o from vendor/hmmer/src/hmmdwrkr_shard.c
2023-10-22T14:20:15,256   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/hmmdwrkr_shard.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdwrkr_shard.o
2023-10-22T14:20:15,339   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/logsum.o from vendor/hmmer/src/logsum.c
2023-10-22T14:20:15,341   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/logsum.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/logsum.o
2023-10-22T14:20:15,477   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/mpisupport.o from vendor/hmmer/src/mpisupport.c
2023-10-22T14:20:15,479   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/mpisupport.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/mpisupport.o
2023-10-22T14:20:15,714   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/seqmodel.o from vendor/hmmer/src/seqmodel.c
2023-10-22T14:20:15,717   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/seqmodel.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/seqmodel.o
2023-10-22T14:20:16,322   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_builder.o from vendor/hmmer/src/p7_builder.c
2023-10-22T14:20:16,324   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_builder.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_builder.o
2023-10-22T14:20:16,457   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_gmxb.o from vendor/hmmer/src/p7_gmxb.c
2023-10-22T14:20:16,459   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_gmxb.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_gmxb.o
2023-10-22T14:20:16,701   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/modelconfig.o from vendor/hmmer/src/modelconfig.c
2023-10-22T14:20:16,704   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/modelconfig.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/modelconfig.o
2023-10-22T14:20:17,152   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/tracealign.o from vendor/hmmer/src/tracealign.c
2023-10-22T14:20:17,154   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/tracealign.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/tracealign.o
2023-10-22T14:20:18,463   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_gmxchk.o from vendor/hmmer/src/p7_gmxchk.c
2023-10-22T14:20:18,465   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_gmxchk.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_gmxchk.o
2023-10-22T14:20:18,836   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/modelstats.o from vendor/hmmer/src/modelstats.c
2023-10-22T14:20:18,838   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/modelstats.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/modelstats.o
2023-10-22T14:20:20,330   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hit.o from vendor/hmmer/src/p7_hit.c
2023-10-22T14:20:20,332   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_hit.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hit.o
2023-10-22T14:20:20,381   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_domain.o from vendor/hmmer/src/p7_domain.c
2023-10-22T14:20:20,384   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_domain.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_domain.o
2023-10-22T14:20:20,855   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hmmd_search_stats.o from vendor/hmmer/src/p7_hmmd_search_stats.c
2023-10-22T14:20:20,857   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_hmmd_search_stats.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hmmd_search_stats.o
2023-10-22T14:20:21,456   vendor/hmmer/src/p7_hit.c: In function ‘p7_hit_Serialize’:
2023-10-22T14:20:21,457   vendor/hmmer/src/p7_hit.c:287:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:21,458      network_64bit = esl_hton64(*((uint64_t *) &(obj->sortkey)));
2023-10-22T14:20:21,458                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:21,459   vendor/hmmer/src/p7_hit.c:292:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:21,460      network_32bit = esl_hton32(*((uint32_t *) &(obj->score)));
2023-10-22T14:20:21,460                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:21,460   vendor/hmmer/src/p7_hit.c:297:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:21,461      network_32bit = esl_hton32(*((uint32_t *) &(obj->pre_score)));
2023-10-22T14:20:21,461                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:21,462   vendor/hmmer/src/p7_hit.c:302:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:21,462      network_32bit = esl_hton32(*((uint32_t *) &(obj->sum_score)));
2023-10-22T14:20:21,463                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:21,463   vendor/hmmer/src/p7_hit.c:307:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:21,464      network_64bit = esl_hton64(*((uint64_t *) &(obj->lnP)));
2023-10-22T14:20:21,464                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:21,464   vendor/hmmer/src/p7_hit.c:312:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:21,465      network_64bit = esl_hton64(*((uint64_t *) &(obj->pre_lnP)));
2023-10-22T14:20:21,465                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:21,466   vendor/hmmer/src/p7_hit.c:317:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:21,476      network_64bit = esl_hton64(*((uint64_t *) &(obj->sum_lnP)));
2023-10-22T14:20:21,477                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:21,478   vendor/hmmer/src/p7_hit.c:322:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:21,478      network_32bit = esl_hton32(*((uint32_t *) &(obj->nexpected)));
2023-10-22T14:20:21,478                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:21,479   vendor/hmmer/src/p7_hit.c:403:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:21,479      if(ptr -(*buf + *n) != ser_size){
2023-10-22T14:20:21,480                          ^~
2023-10-22T14:20:21,480   vendor/hmmer/src/p7_hit.c: In function ‘p7_hit_Deserialize’:
2023-10-22T14:20:21,481   vendor/hmmer/src/p7_hit.c:471:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:21,481      ret_obj->sortkey = *((double *) &host_64bit);
2023-10-22T14:20:21,482                          ~^~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:21,482   vendor/hmmer/src/p7_hit.c:477:22: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:21,483      ret_obj->score = *((float *) &host_32bit);
2023-10-22T14:20:21,484                        ~^~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:21,485   vendor/hmmer/src/p7_hit.c:483:26: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:21,496      ret_obj->pre_score = *((float *) &host_32bit);
2023-10-22T14:20:21,497                            ~^~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:21,498   vendor/hmmer/src/p7_hit.c:489:26: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:21,498      ret_obj->sum_score = *((float *) &host_32bit);
2023-10-22T14:20:21,499                            ~^~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:21,499   vendor/hmmer/src/p7_hit.c:495:20: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:21,500      ret_obj->lnP = *((double *) &host_64bit);
2023-10-22T14:20:21,500                      ~^~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:21,500   vendor/hmmer/src/p7_hit.c:501:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:21,501      ret_obj->pre_lnP = *((double *) &host_64bit);
2023-10-22T14:20:21,501                          ~^~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:21,502   vendor/hmmer/src/p7_hit.c:507:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:21,502      ret_obj->sum_lnP = *((double *) &host_64bit);
2023-10-22T14:20:21,503                          ~^~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:21,503   vendor/hmmer/src/p7_hit.c:513:26: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:21,504      ret_obj->nexpected = *((float *) &host_32bit);
2023-10-22T14:20:21,504                            ~^~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:21,505   vendor/hmmer/src/p7_hit.c:621:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:21,505      if((ptr - (buf + *n)) !=obj_size){
2023-10-22T14:20:21,505                            ^~
2023-10-22T14:20:21,523   vendor/hmmer/src/p7_domain.c: In function ‘p7_domain_Serialize’:
2023-10-22T14:20:21,524   vendor/hmmer/src/p7_domain.c:228:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:21,525      network_32bit = esl_hton32(*((uint32_t *) &(obj->envsc)));  // ow, this hurts, but is probably the best way to get the
2023-10-22T14:20:21,525                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:21,526   vendor/hmmer/src/p7_domain.c:235:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:21,526      network_32bit = esl_hton32(*((uint32_t *) &(obj->domcorrection)));
2023-10-22T14:20:21,527                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:21,527   vendor/hmmer/src/p7_domain.c:240:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:21,528      network_32bit = esl_hton32(*((uint32_t *) &(obj->dombias)));
2023-10-22T14:20:21,528                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:21,529   vendor/hmmer/src/p7_domain.c:245:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:21,529      network_32bit = esl_hton32(*((uint32_t *) &(obj->oasc)));
2023-10-22T14:20:21,530                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:21,530   vendor/hmmer/src/p7_domain.c:250:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:21,531      network_32bit = esl_hton32(*((uint32_t *) &(obj->bitscore)));
2023-10-22T14:20:21,531                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:21,532   vendor/hmmer/src/p7_domain.c:255:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:21,532      network_64bit = esl_hton64(*((uint64_t *) &(obj->lnP)));
2023-10-22T14:20:21,533                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:21,533   vendor/hmmer/src/p7_domain.c:290:16: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:21,534      if (ser_size != ptr - (*buf + *n)){
2023-10-22T14:20:21,534                   ^~
2023-10-22T14:20:21,535   vendor/hmmer/src/p7_domain.c: In function ‘p7_domain_Deserialize’:
2023-10-22T14:20:21,535   vendor/hmmer/src/p7_domain.c:379:22: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:21,536      ret_obj->envsc = *((float *) &host_32bit);
2023-10-22T14:20:21,546                        ~^~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:21,547   vendor/hmmer/src/p7_domain.c:385:30: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:21,548      ret_obj->domcorrection = *((float *) &host_32bit);
2023-10-22T14:20:21,548                                ~^~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:21,549   vendor/hmmer/src/p7_domain.c:391:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:21,550      ret_obj->dombias = *((float *) &host_32bit);
2023-10-22T14:20:21,550                          ~^~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:21,551   vendor/hmmer/src/p7_domain.c:397:21: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:21,552      ret_obj->oasc = *((float *) &host_32bit);
2023-10-22T14:20:21,552                       ~^~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:21,553   vendor/hmmer/src/p7_domain.c:403:25: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:21,553      ret_obj->bitscore = *((float *) &host_32bit);
2023-10-22T14:20:21,554                           ~^~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:21,554   vendor/hmmer/src/p7_domain.c:409:20: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:21,555      ret_obj->lnP = *((double *) &host_64bit);
2023-10-22T14:20:21,555                      ~^~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:21,556   vendor/hmmer/src/p7_domain.c:436:38: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:21,567          ret_obj->scores_per_pos[i] = *((float *) &host_32bit);
2023-10-22T14:20:21,567                                        ~^~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:21,568   vendor/hmmer/src/p7_domain.c:442:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:21,569      if(ptr - (buf + *n) != obj_size){
2023-10-22T14:20:21,570                          ^~
2023-10-22T14:20:21,965   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_alidisplay.o from vendor/hmmer/src/p7_alidisplay.c
2023-10-22T14:20:21,967   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_alidisplay.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_alidisplay.o
2023-10-22T14:20:22,045   vendor/hmmer/src/p7_hmmd_search_stats.c: In function ‘p7_hmmd_search_stats_Serialize’:
2023-10-22T14:20:22,047   vendor/hmmer/src/p7_hmmd_search_stats.c:89:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:22,047      network_64bit = esl_hton64(*((uint64_t *) &(obj->elapsed)));  // ow, this hurts, but is probably the best way to get the
2023-10-22T14:20:22,048                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:22,049   vendor/hmmer/src/p7_hmmd_search_stats.c:97:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:22,049      network_64bit = esl_hton64(*((uint64_t *) &(obj->user)));
2023-10-22T14:20:22,050                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:22,050   vendor/hmmer/src/p7_hmmd_search_stats.c:103:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:22,051      network_64bit = esl_hton64(*((uint64_t *) &(obj->sys)));
2023-10-22T14:20:22,051                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:22,051   vendor/hmmer/src/p7_hmmd_search_stats.c:109:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:22,052      network_64bit = esl_hton64(*((uint64_t *) &(obj->Z)));
2023-10-22T14:20:22,052                                  ~^~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:22,053   vendor/hmmer/src/p7_hmmd_search_stats.c:115:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:22,053      network_64bit = esl_hton64(*((uint64_t *) &(obj->domZ)));
2023-10-22T14:20:22,054                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:22,054   vendor/hmmer/src/p7_hmmd_search_stats.c:205:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘const long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:22,055        for (i = 0; i < obj->nhits; i++)
2023-10-22T14:20:22,055                      ^
2023-10-22T14:20:22,056   vendor/hmmer/src/p7_hmmd_search_stats.c: In function ‘p7_hmmd_search_stats_Deserialize’:
2023-10-22T14:20:22,057   vendor/hmmer/src/p7_hmmd_search_stats.c:258:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:22,058      ret_obj->elapsed = *((double *) &host_64bit);
2023-10-22T14:20:22,059                          ~^~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:22,059   vendor/hmmer/src/p7_hmmd_search_stats.c:264:21: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:22,060      ret_obj->user = *((double *) &host_64bit);
2023-10-22T14:20:22,060                       ~^~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:22,061   vendor/hmmer/src/p7_hmmd_search_stats.c:270:20: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:22,061      ret_obj->sys = *((double *) &host_64bit);
2023-10-22T14:20:22,062                      ~^~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:22,064   vendor/hmmer/src/p7_hmmd_search_stats.c:276:18: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:22,065      ret_obj->Z = *((double *) &host_64bit);
2023-10-22T14:20:22,066                    ~^~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:22,086   vendor/hmmer/src/p7_hmmd_search_stats.c:282:21: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T14:20:22,087      ret_obj->domZ = *((double *) &host_64bit);
2023-10-22T14:20:22,088                       ~^~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:22,088   vendor/hmmer/src/p7_hmmd_search_stats.c:380:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:22,088        for (i = 1; i < ret_obj->nhits; i++)
2023-10-22T14:20:22,089                      ^
2023-10-22T14:20:22,693   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_domaindef.o from vendor/hmmer/src/p7_domaindef.c
2023-10-22T14:20:22,695   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_domaindef.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_domaindef.o
2023-10-22T14:20:22,924   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hmmwindow.o from vendor/hmmer/src/p7_hmmwindow.c
2023-10-22T14:20:22,926   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_hmmwindow.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hmmwindow.o
2023-10-22T14:20:23,142   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hmm.o from vendor/hmmer/src/p7_hmm.c
2023-10-22T14:20:23,143   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_hmm.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hmm.o
2023-10-22T14:20:23,231   vendor/hmmer/src/p7_alidisplay.c: In function ‘p7_alidisplay_Deserialize’:
2023-10-22T14:20:23,233   vendor/hmmer/src/p7_alidisplay.c:725:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:23,233      if(ret_obj->memsize < (obj_size - SER_BASE_SIZE)){  // ret_obj doesn't have enough space for this P7_ALIDISPLAY
2023-10-22T14:20:23,234                          ^
2023-10-22T14:20:23,241   vendor/hmmer/src/p7_alidisplay.c:885:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:23,242      if(mem_ptr - ret_obj->mem != (obj_size - SER_BASE_SIZE)){
2023-10-22T14:20:23,242                                ^~
2023-10-22T14:20:24,314   vendor/hmmer/src/p7_hmm.c: In function ‘p7_hmm_Validate’:
2023-10-22T14:20:24,314   vendor/hmmer/src/p7_hmm.c:1282:85: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:24,315      if (hmm->flags & p7H_RF)   { if (hmm->rf == NULL        || strlen(hmm->rf)        != hmm->M+1) ESL_XFAIL(eslFAIL, errbuf, "p7H_RF flag up, but rf string is invalid");            }
2023-10-22T14:20:24,315                                                                                        ^~
2023-10-22T14:20:24,316   vendor/hmmer/src/p7_hmm.c:1285:86: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:24,316      if (hmm->flags & p7H_MMASK) { if (hmm->mm == NULL        || strlen(hmm->mm)        != hmm->M+1) ESL_XFAIL(eslFAIL, errbuf, "p7H_MMASK flag up, but mm string is invalid");            }
2023-10-22T14:20:24,317                                                                                         ^~
2023-10-22T14:20:24,317   vendor/hmmer/src/p7_hmm.c:1288:85: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:24,318      if (hmm->flags & p7H_CONS) { if (hmm->consensus == NULL || strlen(hmm->consensus) != hmm->M+1) ESL_XFAIL(eslFAIL, errbuf, "p7H_CONS flag up, but consensus string is invalid");   }
2023-10-22T14:20:24,318                                                                                        ^~
2023-10-22T14:20:24,319   vendor/hmmer/src/p7_hmm.c:1291:85: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:24,320      if (hmm->flags & p7H_CS)   { if (hmm->cs == NULL        || strlen(hmm->cs)        != hmm->M+1) ESL_XFAIL(eslFAIL, errbuf, "p7H_CS flag up, but cs string is invalid");   }
2023-10-22T14:20:24,320                                                                                        ^~
2023-10-22T14:20:24,336   vendor/hmmer/src/p7_hmm.c:1294:85: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:24,337      if (hmm->flags & p7H_CA)   { if (hmm->ca == NULL        || strlen(hmm->ca)        != hmm->M+1) ESL_XFAIL(eslFAIL, errbuf, "p7H_CA flag up, but ca string is invalid");   }
2023-10-22T14:20:24,338                                                                                        ^~
2023-10-22T14:20:24,352   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_pipeline.o from vendor/hmmer/src/p7_pipeline.c
2023-10-22T14:20:24,352   vendor/hmmer/src/p7_domaindef.c: In function ‘rescore_isolated_domain.isra.0’:
2023-10-22T14:20:24,353   vendor/hmmer/src/p7_domaindef.c:932:5: warning: ‘orig_L’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T14:20:24,354        p7_oprofile_ReconfigRestLength(om, orig_L);
2023-10-22T14:20:24,354        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:24,355   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_pipeline.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_pipeline.o
2023-10-22T14:20:25,648   In file included from vendor/hmmer/src/p7_pipeline.c:15:
2023-10-22T14:20:25,649   vendor/hmmer/src/p7_pipeline.c: In function ‘p7_pli_postSSV_LongTarget’:
2023-10-22T14:20:25,649   vendor/easel/easel.h:431:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:25,650    #define ESL_MIN(a,b)          (((a)<(b))?(a):(b))
2023-10-22T14:20:25,650                                       ^
2023-10-22T14:20:25,651   vendor/hmmer/src/p7_pipeline.c:1407:61: note: in expansion of macro ‘ESL_MIN’
2023-10-22T14:20:25,651               p7_hmmwindow_new(vit_windowlist, 0, new_n, 0, 0, ESL_MIN(max_window_len,new_len), 0.0, p7_NOCOMPLEMENT, new_len );
2023-10-22T14:20:25,652                                                                ^~~~~~~
2023-10-22T14:20:25,652   vendor/easel/easel.h:431:42: warning: operand of ?: changes signedness from ‘int’ to ‘uint32_t’ {aka ‘unsigned int’} due to unsignedness of other operand [-Wsign-compare]
2023-10-22T14:20:25,653    #define ESL_MIN(a,b)          (((a)<(b))?(a):(b))
2023-10-22T14:20:25,653                                             ^~~
2023-10-22T14:20:25,654   vendor/hmmer/src/p7_pipeline.c:1407:61: note: in expansion of macro ‘ESL_MIN’
2023-10-22T14:20:25,654               p7_hmmwindow_new(vit_windowlist, 0, new_n, 0, 0, ESL_MIN(max_window_len,new_len), 0.0, p7_NOCOMPLEMENT, new_len );
2023-10-22T14:20:25,655                                                                ^~~~~~~
2023-10-22T14:20:25,655   vendor/hmmer/src/p7_pipeline.c:1408:27: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:25,656             } while (new_len > max_window_len);
2023-10-22T14:20:25,656                              ^
2023-10-22T14:20:25,666   vendor/hmmer/src/p7_pipeline.c: In function ‘p7_Pipeline_LongTarget’:
2023-10-22T14:20:25,667   vendor/hmmer/src/p7_pipeline.c:1655:46: warning: operand of ?: changes signedness from ‘int64_t’ {aka ‘const long long int’} to ‘uint64_t’ {aka ‘long long unsigned int’} due to unsignedness of other operand [-Wsign-compare]
2023-10-22T14:20:25,667                (fmf != NULL ? seq_start       : sq->start),
2023-10-22T14:20:25,668                                                 ^~~~~~~~~
2023-10-22T14:20:25,668   vendor/hmmer/src/p7_pipeline.c:1660:46: warning: operand of ?: changes signedness from ‘int’ to ‘uint32_t’ {aka ‘unsigned int’} due to unsignedness of other operand [-Wsign-compare]
2023-10-22T14:20:25,669                (fmf != NULL ? seq_data.length : -1),
2023-10-22T14:20:25,669                                                 ^~
2023-10-22T14:20:26,051   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_gbands.o from vendor/hmmer/src/p7_gbands.c
2023-10-22T14:20:26,053   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_gbands.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_gbands.o
2023-10-22T14:20:26,993   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_gmx.o from vendor/hmmer/src/p7_gmx.c
2023-10-22T14:20:26,995   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_gmx.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_gmx.o
2023-10-22T14:20:27,539   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hmmcache.o from vendor/hmmer/src/p7_hmmcache.c
2023-10-22T14:20:27,542   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_hmmcache.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hmmcache.o
2023-10-22T14:20:28,234   In file included from vendor/hmmer/src/hmmer.h:42,
2023-10-22T14:20:28,235                    from vendor/hmmer/src/p7_gmx.c:11:
2023-10-22T14:20:28,235   vendor/hmmer/src/p7_gmx.c: In function ‘p7_gmx_GrowTo’:
2023-10-22T14:20:28,236   vendor/easel/easel.h:431:36: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:28,236    #define ESL_MIN(a,b)          (((a)<(b))?(a):(b))
2023-10-22T14:20:28,237                                       ^
2023-10-22T14:20:28,237   vendor/hmmer/src/p7_gmx.c:144:20: note: in expansion of macro ‘ESL_MIN’
2023-10-22T14:20:28,238          gx->validR = ESL_MIN(gx->ncells / gx->allocW, gx->allocR);
2023-10-22T14:20:28,238                       ^~~~~~~
2023-10-22T14:20:28,239   vendor/easel/easel.h:431:46: warning: operand of ?: changes signedness from ‘int’ to ‘uint64_t’ {aka ‘long long unsigned int’} due to unsignedness of other operand [-Wsign-compare]
2023-10-22T14:20:28,239    #define ESL_MIN(a,b)          (((a)<(b))?(a):(b))
2023-10-22T14:20:28,240                                                 ^~~
2023-10-22T14:20:28,240   vendor/hmmer/src/p7_gmx.c:144:20: note: in expansion of macro ‘ESL_MIN’
2023-10-22T14:20:28,241          gx->validR = ESL_MIN(gx->ncells / gx->allocW, gx->allocR);
2023-10-22T14:20:28,241                       ^~~~~~~
2023-10-22T14:20:28,739   vendor/hmmer/src/p7_hmmcache.c: In function ‘p7_hmmcache_Sizeof’:
2023-10-22T14:20:28,740   vendor/hmmer/src/p7_hmmcache.c:111:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:28,741      for (i = 0; i < cache->n; i++)
2023-10-22T14:20:28,741                    ^
2023-10-22T14:20:28,743   vendor/hmmer/src/p7_hmmcache.c: In function ‘p7_hmmcache_SetNumericNames’:
2023-10-22T14:20:28,744   vendor/hmmer/src/p7_hmmcache.c:139:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:28,745      for (i = 0; i < cache->n; i++)
2023-10-22T14:20:28,745                    ^
2023-10-22T14:20:28,748   vendor/hmmer/src/p7_hmmcache.c: In function ‘p7_hmmcache_Close’:
2023-10-22T14:20:28,749   vendor/hmmer/src/p7_hmmcache.c:162:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:28,750          for (i = 0; i < cache->n; i++)
2023-10-22T14:20:28,750                        ^
2023-10-22T14:20:28,837   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_bg.o from vendor/hmmer/src/p7_bg.c
2023-10-22T14:20:28,837   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_bg.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_bg.o
2023-10-22T14:20:29,313   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_spensemble.o from vendor/hmmer/src/p7_spensemble.c
2023-10-22T14:20:29,315   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_spensemble.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_spensemble.o
2023-10-22T14:20:29,412   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/fm_alphabet.o from vendor/hmmer/src/fm_alphabet.c
2023-10-22T14:20:29,414   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/fm_alphabet.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/fm_alphabet.o
2023-10-22T14:20:30,875   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_prior.o from vendor/hmmer/src/p7_prior.c
2023-10-22T14:20:30,877   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_prior.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_prior.o
2023-10-22T14:20:31,010   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/null2.o from vendor/hmmer/src/impl_neon/null2.c
2023-10-22T14:20:31,011   creating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon
2023-10-22T14:20:31,017   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/impl_neon/null2.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/null2.o
2023-10-22T14:20:31,119   vendor/hmmer/src/p7_spensemble.c: In function ‘p7_spensemble_Cluster’:
2023-10-22T14:20:31,120   vendor/hmmer/src/p7_spensemble.c:294:25: warning: ‘mmax’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T14:20:31,120      int imax, jmax, kmax, mmax;
2023-10-22T14:20:31,121                            ^~~~
2023-10-22T14:20:31,122   vendor/hmmer/src/p7_spensemble.c:363:7: warning: ‘kmax’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T14:20:31,123          for (best_k = kmin; best_k <= kmax; best_k++) if (sp->epc[best_k-kmin] >= epc_threshold) break;
2023-10-22T14:20:31,125          ^~~
2023-10-22T14:20:31,125   vendor/hmmer/src/p7_spensemble.c:294:13: warning: ‘jmax’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T14:20:31,126      int imax, jmax, kmax, mmax;
2023-10-22T14:20:31,127                ^~~~
2023-10-22T14:20:31,127   vendor/hmmer/src/p7_spensemble.c:357:7: warning: ‘imax’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T14:20:31,127          for (best_i = imin; best_i <= imax; best_i++) if (sp->epc[best_i-imin] >= epc_threshold) break;
2023-10-22T14:20:31,128          ^~~
2023-10-22T14:20:31,128   vendor/hmmer/src/p7_spensemble.c:293:25: warning: ‘mmin’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T14:20:31,129      int imin, jmin, kmin, mmin;
2023-10-22T14:20:31,129                            ^~~~
2023-10-22T14:20:31,130   vendor/hmmer/src/p7_spensemble.c:362:82: warning: ‘kmin’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T14:20:31,130          for (h = 0; h < sp->n; h++) if (sp->assignment[h] == c) sp->epc[sp->sp[h].k-kmin]++;
2023-10-22T14:20:31,131                                                                          ~~~~~~~~~~~^~~~~
2023-10-22T14:20:31,131   vendor/hmmer/src/p7_spensemble.c:293:13: warning: ‘jmin’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T14:20:31,131      int imin, jmin, kmin, mmin;
2023-10-22T14:20:31,132                ^~~~
2023-10-22T14:20:31,135   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/fm_general.o from vendor/hmmer/src/fm_general.c
2023-10-22T14:20:31,138   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/fm_general.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/fm_general.o
2023-10-22T14:20:31,961   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_tophits.o from vendor/hmmer/src/p7_tophits.c
2023-10-22T14:20:31,963   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_tophits.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_tophits.o
2023-10-22T14:20:32,310   vendor/hmmer/src/fm_general.c: In function ‘fm_findOverlappingAmbiguityBlock’:
2023-10-22T14:20:32,310   vendor/hmmer/src/fm_general.c:292:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:32,311      if (ranges[lo].lower > end)     return -1;
2023-10-22T14:20:32,311                           ^
2023-10-22T14:20:32,312   vendor/hmmer/src/fm_general.c:293:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:32,312      if (ranges[hi].upper < start)   return -1;
2023-10-22T14:20:32,313                           ^
2023-10-22T14:20:32,313   vendor/hmmer/src/fm_general.c:297:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:32,314        if      (ranges[mid].lower   < start)  lo = mid + 1; // too far left
2023-10-22T14:20:32,314                                     ^
2023-10-22T14:20:32,315   vendor/hmmer/src/fm_general.c:302:42: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:32,315      if      (lo>0 &&  ranges[lo-1].upper   >= start && ranges[lo-1].lower <= end) return lo-1;
2023-10-22T14:20:32,316                                             ^~
2023-10-22T14:20:32,316   vendor/hmmer/src/fm_general.c:302:73: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:32,317      if      (lo>0 &&  ranges[lo-1].upper   >= start && ranges[lo-1].lower <= end) return lo-1;
2023-10-22T14:20:32,317                                                                            ^~
2023-10-22T14:20:32,317   vendor/hmmer/src/fm_general.c:303:42: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:32,318      else if (         ranges[lo].upper     >= start && ranges[lo].lower   <= end) return lo;
2023-10-22T14:20:32,318                                             ^~
2023-10-22T14:20:32,319   vendor/hmmer/src/fm_general.c:303:73: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:32,319      else if (         ranges[lo].upper     >= start && ranges[lo].lower   <= end) return lo;
2023-10-22T14:20:32,320                                                                            ^~
2023-10-22T14:20:32,320   vendor/hmmer/src/fm_general.c: In function ‘fm_convertRange2DSQ’:
2023-10-22T14:20:32,321   vendor/hmmer/src/fm_general.c:350:20: warning: comparison of integer expressions of different signedness: ‘int32_t’ {aka ‘int’} and ‘unsigned int’ [-Wsign-compare]
2023-10-22T14:20:32,321            while (pos <= fm->ambig_offset + fm->ambig_cnt -1 && meta->ambig_list->ranges[pos].lower <= first+length-1) {
2023-10-22T14:20:32,321                       ^~
2023-10-22T14:20:32,322   vendor/hmmer/src/fm_general.c:350:98: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:32,322            while (pos <= fm->ambig_offset + fm->ambig_cnt -1 && meta->ambig_list->ranges[pos].lower <= first+length-1) {
2023-10-22T14:20:32,323                                                                                                     ^~
2023-10-22T14:20:32,323   In file included from vendor/hmmer/src/fm_general.c:12:
2023-10-22T14:20:32,323   vendor/easel/easel.h:432:36: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:32,324    #define ESL_MAX(a,b)          (((a)>(b))?(a):(b))
2023-10-22T14:20:32,325                                       ^
2023-10-22T14:20:32,325   vendor/hmmer/src/fm_general.c:351:23: note: in expansion of macro ‘ESL_MAX’
2023-10-22T14:20:32,325              int start = ESL_MAX(first,          meta->ambig_list->ranges[pos].lower);
2023-10-22T14:20:32,326                          ^~~~~~~
2023-10-22T14:20:32,326   vendor/easel/easel.h:432:46: warning: operand of ?: changes signedness from ‘int’ to ‘uint64_t’ {aka ‘long long unsigned int’} due to unsignedness of other operand [-Wsign-compare]
2023-10-22T14:20:32,327    #define ESL_MAX(a,b)          (((a)>(b))?(a):(b))
2023-10-22T14:20:32,327                                                 ^~~
2023-10-22T14:20:32,328   vendor/hmmer/src/fm_general.c:351:23: note: in expansion of macro ‘ESL_MAX’
2023-10-22T14:20:32,328              int start = ESL_MAX(first,          meta->ambig_list->ranges[pos].lower);
2023-10-22T14:20:32,328                          ^~~~~~~
2023-10-22T14:20:32,329   vendor/easel/easel.h:431:36: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:32,329    #define ESL_MIN(a,b)          (((a)<(b))?(a):(b))
2023-10-22T14:20:32,330                                       ^
2023-10-22T14:20:32,330   vendor/hmmer/src/fm_general.c:352:23: note: in expansion of macro ‘ESL_MIN’
2023-10-22T14:20:32,330              int end =   ESL_MIN(first+length-1, meta->ambig_list->ranges[pos].upper);
2023-10-22T14:20:32,331                          ^~~~~~~
2023-10-22T14:20:32,331   vendor/easel/easel.h:431:46: warning: operand of ?: changes signedness from ‘int’ to ‘uint64_t’ {aka ‘long long unsigned int’} due to unsignedness of other operand [-Wsign-compare]
2023-10-22T14:20:32,332    #define ESL_MIN(a,b)          (((a)<(b))?(a):(b))
2023-10-22T14:20:32,332                                                 ^~~
2023-10-22T14:20:32,332   vendor/hmmer/src/fm_general.c:352:23: note: in expansion of macro ‘ESL_MIN’
2023-10-22T14:20:32,333              int end =   ESL_MIN(first+length-1, meta->ambig_list->ranges[pos].upper);
2023-10-22T14:20:32,333                          ^~~~~~~
2023-10-22T14:20:32,333   vendor/hmmer/src/fm_general.c:353:27: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:32,334              for (j= start; j<=end; j++)
2023-10-22T14:20:32,334                              ^~
2023-10-22T14:20:32,362   vendor/hmmer/src/fm_general.c: In function ‘fm_FM_read’:
2023-10-22T14:20:32,363   vendor/hmmer/src/fm_general.c:537:75: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int32_t’ {aka ‘int’} [-Wsign-compare]
2023-10-22T14:20:32,363         (getAll && fread(fm->T, sizeof(uint8_t), compressed_bytes, meta->fp) != compressed_bytes) ||
2023-10-22T14:20:32,364                                                                              ^~
2023-10-22T14:20:32,364   vendor/hmmer/src/fm_general.c:538:68: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int32_t’ {aka ‘int’} [-Wsign-compare]
2023-10-22T14:20:32,365         (fread(fm->BWT, sizeof(uint8_t), compressed_bytes, meta->fp)  != compressed_bytes) ||
2023-10-22T14:20:32,365                                                                       ^~
2023-10-22T14:20:32,368   vendor/hmmer/src/fm_general.c: In function ‘fm_readFMmeta’:
2023-10-22T14:20:32,368   vendor/hmmer/src/fm_general.c:620:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:32,369      for (i=0; i<meta->seq_count; i++) {
2023-10-22T14:20:32,369                 ^
2023-10-22T14:20:32,374   vendor/hmmer/src/fm_general.c:638:101: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:32,375            fread(meta->seq_data[i].name,   sizeof(char), meta->seq_data[i].name_length+1   , meta->fp) !=  meta->seq_data[i].name_length+1  ||
2023-10-22T14:20:32,375                                                                                                        ^~
2023-10-22T14:20:32,376   vendor/hmmer/src/fm_general.c:639:101: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:32,376            fread(meta->seq_data[i].acc,    sizeof(char), meta->seq_data[i].acc_length+1    , meta->fp) !=  meta->seq_data[i].acc_length+1  ||
2023-10-22T14:20:32,377                                                                                                        ^~
2023-10-22T14:20:32,377   vendor/hmmer/src/fm_general.c:640:101: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:32,378            fread(meta->seq_data[i].source, sizeof(char), meta->seq_data[i].source_length+1 , meta->fp) !=  meta->seq_data[i].source_length+1  ||
2023-10-22T14:20:32,378                                                                                                        ^~
2023-10-22T14:20:32,379   vendor/hmmer/src/fm_general.c:641:101: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:32,379            fread(meta->seq_data[i].desc,   sizeof(char), meta->seq_data[i].desc_length+1   , meta->fp) !=  meta->seq_data[i].desc_length+1
2023-10-22T14:20:32,380                                                                                                        ^~
2023-10-22T14:20:32,398   vendor/hmmer/src/fm_general.c:651:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:32,398      for (i=0; i<meta->ambig_list->count; i++) {
2023-10-22T14:20:32,399                 ^
2023-10-22T14:20:32,399   vendor/hmmer/src/fm_general.c:663:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:32,400        for (i=0; i<meta->seq_count; i++)
2023-10-22T14:20:32,400                   ^
2023-10-22T14:20:32,403   vendor/hmmer/src/fm_general.c: In function ‘fm_metaDestroy’:
2023-10-22T14:20:32,403   vendor/hmmer/src/fm_general.c:727:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:32,404        for (i=0; i<meta->seq_count; i++) {
2023-10-22T14:20:32,404                   ^
2023-10-22T14:20:32,878   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_profile.o from vendor/hmmer/src/p7_profile.c
2023-10-22T14:20:32,880   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_profile.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_profile.o
2023-10-22T14:20:32,945   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/msvfilter.o from vendor/hmmer/src/impl_neon/msvfilter.c
2023-10-22T14:20:32,947   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/impl_neon/msvfilter.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/msvfilter.o
2023-10-22T14:20:33,178   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_Clone’:
2023-10-22T14:20:33,181   vendor/hmmer/src/p7_tophits.c:92:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,181      for (i = 0; i < h2->N; i++) {
2023-10-22T14:20:33,182                    ^
2023-10-22T14:20:33,183   vendor/hmmer/src/p7_tophits.c:100:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,184      for (i = 0; i < h2->N; i++) {
2023-10-22T14:20:33,184                    ^
2023-10-22T14:20:33,188   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_Grow’:
2023-10-22T14:20:33,189   vendor/hmmer/src/p7_tophits.c:143:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,189          for (i = 0; i < h->N; i++)
2023-10-22T14:20:33,190                        ^
2023-10-22T14:20:33,200   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_SortBySortkey’:
2023-10-22T14:20:33,201   vendor/hmmer/src/p7_tophits.c:398:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,201      for (i = 0; i < h->N; i++) h->hit[i] = h->unsrt + i;
2023-10-22T14:20:33,202                    ^
2023-10-22T14:20:33,204   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_SortBySeqidxAndAlipos’:
2023-10-22T14:20:33,205   vendor/hmmer/src/p7_tophits.c:431:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,206      for (i = 0; i < h->N; i++) h->hit[i] = h->unsrt + i;
2023-10-22T14:20:33,206                    ^
2023-10-22T14:20:33,208   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_SortByModelnameAndAlipos’:
2023-10-22T14:20:33,209   vendor/hmmer/src/p7_tophits.c:452:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,210      for (i = 0; i < h->N; i++) h->hit[i] = h->unsrt + i;
2023-10-22T14:20:33,210                    ^
2023-10-22T14:20:33,214   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_Merge’:
2023-10-22T14:20:33,215   vendor/hmmer/src/p7_tophits.c:496:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,216      for (i = 0; i < h1->N; i++)
2023-10-22T14:20:33,217                    ^
2023-10-22T14:20:33,218   vendor/hmmer/src/p7_tophits.c:504:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,219      for (i=0,j=0,k=0; i < h1->N && j < h2->N ; k++)
2023-10-22T14:20:33,219                          ^
2023-10-22T14:20:33,220   vendor/hmmer/src/p7_tophits.c:504:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,221      for (i=0,j=0,k=0; i < h1->N && j < h2->N ; k++)
2023-10-22T14:20:33,222                                       ^
2023-10-22T14:20:33,223   vendor/hmmer/src/p7_tophits.c:506:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,224      while (i < h1->N) new_hit[k++] = h1->hit[i++];
2023-10-22T14:20:33,225               ^
2023-10-22T14:20:33,226   vendor/hmmer/src/p7_tophits.c:507:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,227      while (j < h2->N) new_hit[k++] = new2 + (h2->hit[j++] - h2->unsrt);
2023-10-22T14:20:33,227               ^
2023-10-22T14:20:33,236   vendor/hmmer/src/p7_tophits.c:511:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,237      for (i = 0; i < h2->N; i++)
2023-10-22T14:20:33,238                    ^
2023-10-22T14:20:33,238   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_GetMaxPositionLength’:
2023-10-22T14:20:33,239   vendor/hmmer/src/p7_tophits.c:559:17: warning: comparison of integer expressions of different signedness: ‘int64_t’ {aka ‘long long int’} and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,239      for (i = 0; i < h->N; i++) {
2023-10-22T14:20:33,240                    ^
2023-10-22T14:20:33,240   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_GetMaxNameLength’:
2023-10-22T14:20:33,241   vendor/hmmer/src/p7_tophits.c:589:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,241      for (max = 0, i = 0; i < h->N; i++)
2023-10-22T14:20:33,242                             ^
2023-10-22T14:20:33,242   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_GetMaxAccessionLength’:
2023-10-22T14:20:33,243   vendor/hmmer/src/p7_tophits.c:608:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,244      for (max = 0, i = 0; i < h->N; i++)
2023-10-22T14:20:33,244                             ^
2023-10-22T14:20:33,244   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_GetMaxShownLength’:
2023-10-22T14:20:33,245   vendor/hmmer/src/p7_tophits.c:630:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,245      for (max = 0, i = 0; i < h->N; i++)
2023-10-22T14:20:33,246                             ^
2023-10-22T14:20:33,257   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_Reuse’:
2023-10-22T14:20:33,257   vendor/hmmer/src/p7_tophits.c:663:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,258        for (i = 0; i < h->N; i++)
2023-10-22T14:20:33,258                      ^
2023-10-22T14:20:33,259   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_Destroy’:
2023-10-22T14:20:33,259   vendor/hmmer/src/p7_tophits.c:693:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,260        for (i = 0; i < h->N; i++)
2023-10-22T14:20:33,260                      ^
2023-10-22T14:20:33,261   vendor/hmmer/src/p7_tophits.c: In function ‘workaround_bug_h74’:
2023-10-22T14:20:33,261   vendor/hmmer/src/p7_tophits.c:762:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,261      for (h = 0; h < th->N; h++)
2023-10-22T14:20:33,262                    ^
2023-10-22T14:20:33,262   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_ComputeNhmmerEvalues’:
2023-10-22T14:20:33,263   vendor/hmmer/src/p7_tophits.c:800:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,263      for (i = 0; i < th->N ; i++)
2023-10-22T14:20:33,264                    ^
2023-10-22T14:20:33,266   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_RemoveDuplicates’:
2023-10-22T14:20:33,270   vendor/hmmer/src/p7_tophits.c:836:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,270      for (i = 1; i < th->N; i++)
2023-10-22T14:20:33,271                    ^
2023-10-22T14:20:33,274   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_Threshold’:
2023-10-22T14:20:33,275   vendor/hmmer/src/p7_tophits.c:935:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,275        for (h = 0; h < th->N; h++)
2023-10-22T14:20:33,276                      ^
2023-10-22T14:20:33,287   vendor/hmmer/src/p7_tophits.c:956:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,287      for (h = 0; h < th->N; h++)
2023-10-22T14:20:33,288                    ^
2023-10-22T14:20:33,289   vendor/hmmer/src/p7_tophits.c:974:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,289        for (h = 0; h < th->N; h++)
2023-10-22T14:20:33,290                      ^
2023-10-22T14:20:33,291   vendor/hmmer/src/p7_tophits.c:991:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,291      for (h = 0; h < th->N; h++) {
2023-10-22T14:20:33,292                    ^
2023-10-22T14:20:33,292   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_CompareRanking’:
2023-10-22T14:20:33,293   vendor/hmmer/src/p7_tophits.c:1069:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,293      for (h = 0; h < th->N; h++)
2023-10-22T14:20:33,294                    ^
2023-10-22T14:20:33,294   vendor/hmmer/src/p7_tophits.c:1085:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,295      for (h = 0; h < th->N; h++)
2023-10-22T14:20:33,295                    ^
2023-10-22T14:20:33,312   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_Targets’:
2023-10-22T14:20:33,313   vendor/hmmer/src/p7_tophits.c:1173:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,313      for (h = 0; h < th->N; h++)
2023-10-22T14:20:33,314                    ^
2023-10-22T14:20:33,341   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_Domains’:
2023-10-22T14:20:33,342   vendor/hmmer/src/p7_tophits.c:1289:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,342      for (h = 0; h < th->N; h++)
2023-10-22T14:20:33,343                    ^
2023-10-22T14:20:33,362   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_Alignment’:
2023-10-22T14:20:33,363   vendor/hmmer/src/p7_tophits.c:1528:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘const long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,364      for (h = 0; h < th->N; h++)
2023-10-22T14:20:33,364                    ^
2023-10-22T14:20:33,372   vendor/hmmer/src/p7_tophits.c:1554:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘const long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,373      for (h = 0; h < th->N; h++)
2023-10-22T14:20:33,373                    ^
2023-10-22T14:20:33,390   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_TabularTargets’:
2023-10-22T14:20:33,391   vendor/hmmer/src/p7_tophits.c:1643:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,392      for (h = 0; h < th->N; h++)
2023-10-22T14:20:33,392                    ^
2023-10-22T14:20:33,404   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_TabularDomains’:
2023-10-22T14:20:33,405   vendor/hmmer/src/p7_tophits.c:1736:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,406      for (h = 0; h < th->N; h++)
2023-10-22T14:20:33,406                    ^
2023-10-22T14:20:33,416   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_TabularXfam’:
2023-10-22T14:20:33,417   vendor/hmmer/src/p7_tophits.c:1838:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,418        for (h = 0; h < th->N; h++)
2023-10-22T14:20:33,419                      ^
2023-10-22T14:20:33,425   vendor/hmmer/src/p7_tophits.c:1872:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,425          for (h = 0; h < th->N; h++)
2023-10-22T14:20:33,426                        ^
2023-10-22T14:20:33,440   vendor/hmmer/src/p7_tophits.c:1893:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,440          for (h = 0; h < th->N; h++)
2023-10-22T14:20:33,441                        ^
2023-10-22T14:20:33,444   vendor/hmmer/src/p7_tophits.c:1927:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,445          for (h = 0; h < domHitlist->N; h++)
2023-10-22T14:20:33,445                        ^
2023-10-22T14:20:33,446   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_AliScores’:
2023-10-22T14:20:33,457   vendor/hmmer/src/p7_tophits.c:1980:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:33,458      for (h = 0; h < th->N; h++) {
2023-10-22T14:20:33,458                    ^
2023-10-22T14:20:34,484   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/fm_sse.o from vendor/hmmer/src/fm_sse.c
2023-10-22T14:20:34,486   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/fm_sse.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/fm_sse.o
2023-10-22T14:20:35,115   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/optacc.o from vendor/hmmer/src/impl_neon/optacc.c
2023-10-22T14:20:35,116   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/impl_neon/optacc.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/optacc.o
2023-10-22T14:20:35,573   vendor/hmmer/src/fm_sse.c: In function ‘fm_getOccCount’:
2023-10-22T14:20:35,575   vendor/hmmer/src/fm_sse.c:201:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘const long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:35,576      if (landmark >= fm->N) { // special case: for a count in the final block, just count from the bottom
2023-10-22T14:20:35,576                   ^~
2023-10-22T14:20:35,579   vendor/hmmer/src/fm_sse.c: In function ‘fm_getOccCountLT’:
2023-10-22T14:20:35,580   vendor/hmmer/src/fm_sse.c:389:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘const long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:35,580      if (landmark >= fm->N) { // special case: for a count in the final block, just count from the bottom
2023-10-22T14:20:35,581                   ^~
2023-10-22T14:20:35,583   vendor/hmmer/src/fm_sse.c:404:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:20:35,584      } else if ( b_pos !=  sb_pos * (meta->freq_cnt_sb / meta->freq_cnt_b))  {
2023-10-22T14:20:35,584                        ^~
2023-10-22T14:20:35,631   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/vitfilter.o from vendor/hmmer/src/impl_neon/vitfilter.c
2023-10-22T14:20:35,633   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/impl_neon/vitfilter.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/vitfilter.o
2023-10-22T14:20:35,936   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/fm_ssv.o from vendor/hmmer/src/fm_ssv.c
2023-10-22T14:20:35,937   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/fm_ssv.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/fm_ssv.o
2023-10-22T14:20:36,450   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_Targets’:
2023-10-22T14:20:36,451   vendor/hmmer/src/p7_tophits.c:1200:12: warning: ‘posw’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T14:20:36,452           if (fprintf(ofp, "%c %9.2g %6.1f %5.1f  %-*s %*" PRId64 " %*" PRId64 "",
2023-10-22T14:20:36,453               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:36,453         newness,
2023-10-22T14:20:36,454         ~~~~~~~~
2023-10-22T14:20:36,454         exp(th->hit[h]->lnP), // * pli->Z,
2023-10-22T14:20:36,454         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:36,455         th->hit[h]->score,
2023-10-22T14:20:36,455         ~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:36,456         eslCONST_LOG2R * th->hit[h]->dcl[d].dombias, // an nhmmer hit is really a domain, so this is the hit's bias correction
2023-10-22T14:20:36,456         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:36,456         namew, showname,
2023-10-22T14:20:36,457         ~~~~~~~~~~~~~~~~
2023-10-22T14:20:36,457         posw, th->hit[h]->dcl[d].iali,
2023-10-22T14:20:36,458         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:36,458         posw, th->hit[h]->dcl[d].jali) < 0)
2023-10-22T14:20:36,459         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T14:20:37,059   vendor/hmmer/src/fm_ssv.c: In function ‘FM_mergeSeeds’:
2023-10-22T14:20:37,060   vendor/hmmer/src/fm_ssv.c:70:33: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:37,060              && ( next.n - next.k) == curr_diagval                 //overlapping diagonals will share the same value of (n - k)
2023-10-22T14:20:37,061                                    ^~
2023-10-22T14:20:37,062   vendor/hmmer/src/fm_ssv.c:71:35: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:37,062              && next.n + next.length < curr_n + curr_len + ssv_length       //overlapping, or close to it
2023-10-22T14:20:37,063                                      ^
2023-10-22T14:20:37,065   vendor/hmmer/src/fm_ssv.c: In function ‘FM_backtrackSeed’:
2023-10-22T14:20:37,066   vendor/hmmer/src/fm_ssv.c:134:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘const unsigned int’} [-Wsign-compare]
2023-10-22T14:20:37,067      while ( j != fmf->term_loc && (j % fm_cfg->meta->freq_SA)) { //go until we hit a position in the full SA that was sampled during FM index construction
2023-10-22T14:20:37,067                ^~
2023-10-22T14:20:37,069   vendor/hmmer/src/fm_ssv.c:141:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘const unsigned int’} [-Wsign-compare]
2023-10-22T14:20:37,069      return len + (j==fmf->term_loc ? 0 : fmf->SA[ j / fm_cfg->meta->freq_SA ]) ; // len is how many backward steps we had to take to find a sampled SA position
2023-10-22T14:20:37,070                     ^~
2023-10-22T14:20:37,090   vendor/hmmer/src/fm_ssv.c: In function ‘FM_extendSeed’:
2023-10-22T14:20:37,091   vendor/hmmer/src/fm_ssv.c:664:18: warning: comparison of integer expressions of different signedness: ‘int64_t’ {aka ‘long long int’} and ‘long long unsigned int’ [-Wsign-compare]
2023-10-22T14:20:37,091      if (target_end > fm->N-2) {
2023-10-22T14:20:37,092                     ^
2023-10-22T14:20:37,093   vendor/hmmer/src/fm_ssv.c:678:14: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int32_t’ {aka ‘int’} [-Wsign-compare]
2023-10-22T14:20:37,094      for (  ; k <= model_end; k++, n++) {
2023-10-22T14:20:37,095                 ^~
2023-10-22T14:20:37,292   vendor/hmmer/src/impl_neon/optacc.c: In function ‘p7_OATrace’:
2023-10-22T14:20:37,294   vendor/hmmer/src/impl_neon/optacc.c:268:21: warning: ‘kmax’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T14:20:37,294      int     q     = (k-1) % Q;  /* (q,r) is position of the current DP cell M(i,k) */
2023-10-22T14:20:37,295                      ~~^~~
2023-10-22T14:20:37,296   vendor/hmmer/src/impl_neon/optacc.c:397:16: note: ‘kmax’ was declared here
2023-10-22T14:20:37,296      int    smax, kmax;
2023-10-22T14:20:37,297                   ^~~~
2023-10-22T14:20:37,299   vendor/hmmer/src/impl_neon/optacc.c:272:3: warning: ‘smax’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T14:20:37,299      switch (scur) {
2023-10-22T14:20:37,300      ^~~~~~
2023-10-22T14:20:37,301   vendor/hmmer/src/impl_neon/optacc.c:397:10: note: ‘smax’ was declared here
2023-10-22T14:20:37,301      int    smax, kmax;
2023-10-22T14:20:37,302             ^~~~
2023-10-22T14:20:38,167   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/p7_omx.o from vendor/hmmer/src/impl_neon/p7_omx.c
2023-10-22T14:20:38,167   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/impl_neon/p7_omx.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/p7_omx.o
2023-10-22T14:20:38,236   vendor/hmmer/src/fm_ssv.c: In function ‘p7_SSVFM_longlarget’:
2023-10-22T14:20:38,237   vendor/hmmer/src/fm_ssv.c:696:31: warning: ‘max_hit_end’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T14:20:38,238      diag->length  = max_hit_end - max_hit_start + 1;
2023-10-22T14:20:38,238                      ~~~~~~~~~~~~^~~~~~~~~~~~~~~
2023-10-22T14:20:38,239   vendor/hmmer/src/fm_ssv.c:647:37: note: ‘max_hit_end’ was declared here
2023-10-22T14:20:38,240      int64_t hit_start, max_hit_start, max_hit_end;
2023-10-22T14:20:38,240                                        ^~~~~~~~~~~
2023-10-22T14:20:38,241   vendor/hmmer/src/fm_ssv.c:695:32: warning: ‘max_hit_start’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T14:20:38,242      diag->k       = model_start  + max_hit_start - 1;
2023-10-22T14:20:38,242                      ~~~~~~~~~~~~~^~~~~~~~~~~~~~~
2023-10-22T14:20:38,243   vendor/hmmer/src/fm_ssv.c:647:22: note: ‘max_hit_start’ was declared here
2023-10-22T14:20:38,244      int64_t hit_start, max_hit_start, max_hit_end;
2023-10-22T14:20:38,244                         ^~~~~~~~~~~~~
2023-10-22T14:20:38,355   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/mpi.o from vendor/hmmer/src/impl_neon/mpi.c
2023-10-22T14:20:38,358   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/impl_neon/mpi.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/mpi.o
2023-10-22T14:20:38,586   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/decoding.o from vendor/hmmer/src/impl_neon/decoding.c
2023-10-22T14:20:38,587   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/impl_neon/decoding.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/decoding.o
2023-10-22T14:20:39,149   generating build/temp.linux-armv7l-cpython-37/build/temp.linux-armv7l-cpython-37/p7_hmmfile.o from build/temp.linux-armv7l-cpython-37/p7_hmmfile.c
2023-10-22T14:20:39,152   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c build/temp.linux-armv7l-cpython-37/p7_hmmfile.c -o build/temp.linux-armv7l-cpython-37/build/temp.linux-armv7l-cpython-37/p7_hmmfile.o
2023-10-22T14:20:40,086   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_trace.o from vendor/hmmer/src/p7_trace.c
2023-10-22T14:20:40,087   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_trace.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_trace.o
2023-10-22T14:20:40,297   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/ssvfilter.o from vendor/hmmer/src/impl_neon/ssvfilter.c
2023-10-22T14:20:40,300   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/impl_neon/ssvfilter.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/ssvfilter.o
2023-10-22T14:20:40,463   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c: In function ‘p7_hmmfile_WriteBinary’:
2023-10-22T14:20:40,464   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1026:70: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:40,465        if (fwrite((char *) hmm->mat[k], sizeof(float), hmm->abc->K, fp) != hmm->abc->K) ESL_EXCEPTION_SYS(eslEWRITE, "hmm binary write failed");
2023-10-22T14:20:40,465                                                                         ^~
2023-10-22T14:20:40,468   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1028:70: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:40,469        if (fwrite((char *) hmm->ins[k], sizeof(float), hmm->abc->K, fp) != hmm->abc->K) ESL_EXCEPTION_SYS(eslEWRITE, "hmm binary write failed");
2023-10-22T14:20:40,469                                                                         ^~
2023-10-22T14:20:40,474   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1037:95: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:40,475      if ((hmm->flags & p7H_RF)   && (fwrite((char *) hmm->rf,        sizeof(char), hmm->M+2, fp) != hmm->M+2)) ESL_EXCEPTION_SYS(eslEWRITE, "hmm binary write failed"); /* +2: 1..M and trailing \0 */
2023-10-22T14:20:40,475                                                                                                  ^~
2023-10-22T14:20:40,477   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1038:95: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:40,478      if ((hmm->flags & p7H_MMASK)&& (fwrite((char *) hmm->mm,        sizeof(char), hmm->M+2, fp) != hmm->M+2)) ESL_EXCEPTION_SYS(eslEWRITE, "hmm binary write failed"); /* +2: 1..M and trailing \0 */
2023-10-22T14:20:40,479                                                                                                  ^~
2023-10-22T14:20:40,481   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1039:95: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:40,481      if ((hmm->flags & p7H_CONS) && (fwrite((char *) hmm->consensus, sizeof(char), hmm->M+2, fp) != hmm->M+2)) ESL_EXCEPTION_SYS(eslEWRITE, "hmm binary write failed"); /* don't need to test for >=3e format; p7H_CONS flag suffices (didn't exist pre-3e) */
2023-10-22T14:20:40,482                                                                                                  ^~
2023-10-22T14:20:40,483   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1040:95: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:40,484      if ((hmm->flags & p7H_CS)   && (fwrite((char *) hmm->cs,        sizeof(char), hmm->M+2, fp) != hmm->M+2)) ESL_EXCEPTION_SYS(eslEWRITE, "hmm binary write failed");
2023-10-22T14:20:40,485                                                                                                  ^~
2023-10-22T14:20:40,486   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1041:95: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:40,487      if ((hmm->flags & p7H_CA)   && (fwrite((char *) hmm->ca,        sizeof(char), hmm->M+2, fp) != hmm->M+2)) ESL_EXCEPTION_SYS(eslEWRITE, "hmm binary write failed");
2023-10-22T14:20:40,488                                                                                                  ^~
2023-10-22T14:20:40,492   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1047:95: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:40,492      if ((hmm->flags & p7H_MAP)  && (fwrite((char *) hmm->map,       sizeof(int),  hmm->M+1, fp) != hmm->M+1)) ESL_EXCEPTION_SYS(eslEWRITE, "hmm binary write failed");
2023-10-22T14:20:40,493                                                                                                  ^~
2023-10-22T14:20:40,496   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1064:96: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:40,497      if ((hmm->flags & p7H_COMPO) && (fwrite((char *) hmm->compo, sizeof(float), hmm->abc->K, fp) != hmm->abc->K)) ESL_EXCEPTION_SYS(eslEWRITE, "hmm binary write failed");
2023-10-22T14:20:40,497                                                                                                   ^~
2023-10-22T14:20:40,616   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c: In function ‘multiline’:
2023-10-22T14:20:40,627   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:2022:44: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:40,628      if (fwrite(sptr, sizeof(char), n, fp)    != n) ESL_EXCEPTION_SYS(eslEWRITE, "hmm write failed");  /* using fwrite lets us write fixed # of chars   */
2023-10-22T14:20:40,628                                               ^~
2023-10-22T14:20:40,640   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c: In function ‘write_bin_string’:
2023-10-22T14:20:40,642   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:2145:56: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:20:40,643          if (fwrite((char *) s,    sizeof(char), len, fp) != len) ESL_EXCEPTION_SYS(eslEWRITE, "hmm binary write failed");
2023-10-22T14:20:40,643                                                           ^~
2023-10-22T14:20:41,723   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/stotrace.o from vendor/hmmer/src/impl_neon/stotrace.c
2023-10-22T14:20:41,725   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/impl_neon/stotrace.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/stotrace.o
2023-10-22T14:20:43,946   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/fwdback.o from vendor/hmmer/src/impl_neon/fwdback.c
2023-10-22T14:20:43,947   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/impl_neon/fwdback.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/fwdback.o
2023-10-22T14:20:45,323   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_scoredata.o from vendor/hmmer/src/p7_scoredata.c
2023-10-22T14:20:45,327   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_scoredata.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_scoredata.o
2023-10-22T14:20:47,286   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/p7_oprofile.o from vendor/hmmer/src/impl_neon/p7_oprofile.c
2023-10-22T14:20:47,287   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/impl_neon/p7_oprofile.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/p7_oprofile.o
2023-10-22T14:20:48,044   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmpgmd2msa.o from vendor/hmmer/src/hmmpgmd2msa.c
2023-10-22T14:20:48,047   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/hmmpgmd2msa.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmpgmd2msa.o
2023-10-22T14:20:49,284   vendor/hmmer/src/hmmpgmd2msa.c: In function ‘hmmpgmd2msa’:
2023-10-22T14:20:49,286   vendor/hmmer/src/hmmpgmd2msa.c:131:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:49,286      for (i = 0; i < stats->nhits; ++i) {
2023-10-22T14:20:49,287                    ^
2023-10-22T14:20:49,298   vendor/hmmer/src/hmmpgmd2msa.c:144:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:49,299      for (i=0; i<stats->nhits; i++) {
2023-10-22T14:20:49,299                 ^
2023-10-22T14:20:49,301   vendor/hmmer/src/hmmpgmd2msa.c:163:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:49,302        for (i = 0; i < th->N; i++) {
2023-10-22T14:20:49,303                      ^
2023-10-22T14:20:49,304   vendor/hmmer/src/hmmpgmd2msa.c:172:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:49,305      for (i = 0; i < th->N; i++) {
2023-10-22T14:20:49,306                    ^
2023-10-22T14:20:49,316   vendor/hmmer/src/hmmpgmd2msa.c: In function ‘hmmpgmd2stats_old’:
2023-10-22T14:20:49,317   vendor/hmmer/src/hmmpgmd2msa.c:311:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:49,318      for (i=0; i<stats->nhits; i++) {
2023-10-22T14:20:49,318                 ^
2023-10-22T14:20:49,320   vendor/hmmer/src/hmmpgmd2msa.c:327:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:49,321      for (i = 0; i < th.N; i++)
2023-10-22T14:20:49,321                    ^
2023-10-22T14:20:49,331   vendor/hmmer/src/hmmpgmd2msa.c:450:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:49,332      for (i = 0; i < th.N; i++) {
2023-10-22T14:20:49,332                    ^
2023-10-22T14:20:49,336   vendor/hmmer/src/hmmpgmd2msa.c:473:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T14:20:49,336      for (i = 0; i < th.N; i++) {
2023-10-22T14:20:49,337                    ^
2023-10-22T14:22:27,519   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/io.o from vendor/hmmer/src/impl_neon/io.c
2023-10-22T14:22:27,520   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/impl_neon/io.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/io.o
2023-10-22T14:22:28,472   vendor/hmmer/src/impl_neon/io.c: In function ‘p7_oprofile_Write’:
2023-10-22T14:22:28,473   vendor/hmmer/src/impl_neon/io.c:100:77: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:22:28,474      if (fwrite((char *) om->name,         sizeof(char),     n+1,         ffp) != n+1)         ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-10-22T14:22:28,474                                                                                ^~
2023-10-22T14:22:28,477   vendor/hmmer/src/impl_neon/io.c:110:80: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:22:28,478        if (fwrite( (char *) om->sbv[x],    sizeof(uint8x16_t),  Q16x,        ffp) != Q16x)        ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-10-22T14:22:28,478                                                                                   ^~
2023-10-22T14:22:28,479   vendor/hmmer/src/impl_neon/io.c:113:80: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:22:28,480        if (fwrite( (char *) om->rbv[x],    sizeof(uint8x16_t),  Q16,         ffp) != Q16)         ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-10-22T14:22:28,480                                                                                   ^~
2023-10-22T14:22:28,483   vendor/hmmer/src/impl_neon/io.c:125:77: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:22:28,484      if (fwrite((char *) om->name,         sizeof(char),     n+1,         pfp) != n+1)         ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-10-22T14:22:28,484                                                                                ^~
2023-10-22T14:22:28,486   vendor/hmmer/src/impl_neon/io.c:133:77: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:22:28,486        if (fwrite((char *) om->acc,        sizeof(char),     n+1,         pfp) != n+1)         ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-10-22T14:22:28,487                                                                                ^~
2023-10-22T14:22:28,488   vendor/hmmer/src/impl_neon/io.c:142:77: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:22:28,488        if (fwrite((char *) om->desc,       sizeof(char),     n+1,         pfp) != n+1)         ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-10-22T14:22:28,489                                                                                ^~
2023-10-22T14:22:28,490   vendor/hmmer/src/impl_neon/io.c:145:77: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:22:28,490      if (fwrite((char *) om->rf,           sizeof(char),     om->M+2,     pfp) != om->M+2)     ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-10-22T14:22:28,490                                                                                ^~
2023-10-22T14:22:28,491   vendor/hmmer/src/impl_neon/io.c:146:77: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:22:28,492      if (fwrite((char *) om->mm,           sizeof(char),     om->M+2,     pfp) != om->M+2)     ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-10-22T14:22:28,492                                                                                ^~
2023-10-22T14:22:28,493   vendor/hmmer/src/impl_neon/io.c:147:77: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:22:28,494      if (fwrite((char *) om->cs,           sizeof(char),     om->M+2,     pfp) != om->M+2)     ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-10-22T14:22:28,494                                                                                ^~
2023-10-22T14:22:28,495   vendor/hmmer/src/impl_neon/io.c:148:77: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:22:28,495      if (fwrite((char *) om->consensus,    sizeof(char),     om->M+2,     pfp) != om->M+2)     ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-10-22T14:22:28,496                                                                                ^~
2023-10-22T14:22:28,497   vendor/hmmer/src/impl_neon/io.c:151:82: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:22:28,497      if (fwrite((char *) om->twv,             sizeof(int16x8_t),  8*Q8,        pfp) != 8*Q8)        ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-10-22T14:22:28,497                                                                                     ^~
2023-10-22T14:22:28,498   vendor/hmmer/src/impl_neon/io.c:153:82: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:22:28,499        if (fwrite( (char *) om->rwv[x],       sizeof(int16x8_t),  Q8,          pfp) != Q8)          ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-10-22T14:22:28,499                                                                                     ^~
2023-10-22T14:22:28,502   vendor/hmmer/src/impl_neon/io.c:162:82: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:22:28,503      if (fwrite((char *) om->tfv,          sizeof(float32x4_t),   8*Q4,        pfp) != 8*Q4)        ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-10-22T14:22:28,503                                                                                     ^~
2023-10-22T14:22:28,504   vendor/hmmer/src/impl_neon/io.c:164:82: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T14:22:28,505        if (fwrite( (char *) om->rfv[x],    sizeof(float32x4_t),   Q4,          pfp) != Q4)          ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-10-22T14:22:28,505                                                                                     ^~
2023-10-22T14:22:30,780   arm-linux-gnueabihf-gcc-ar rcs build/temp.linux-armv7l-cpython-37/libhmmer.a build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/build.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/cachedb.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/cachedb_shard.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/emit.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/errors.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/evalues.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/eweight.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_decoding.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_fwdback.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_fwdback_chk.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_fwdback_banded.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_null2.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_msv.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_optacc.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_stotrace.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_viterbi.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_vtrace.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/h2_io.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/heatmap.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmlogo.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdmstr.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdmstr_shard.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmd_search_status.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdwrkr.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdwrkr_shard.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdutils.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmer.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/logsum.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/modelconfig.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/modelstats.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/mpisupport.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/seqmodel.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/tracealign.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_alidisplay.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_bg.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_builder.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_domain.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_domaindef.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_gbands.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_gmx.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_gmxb.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_gmxchk.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hit.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hmm.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hmmcache.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hmmd_search_stats.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hmmwindow.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_pipeline.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_prior.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_profile.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_spensemble.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_tophits.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_trace.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_scoredata.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmpgmd2msa.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/fm_alphabet.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/fm_general.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/fm_sse.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/fm_ssv.o build/temp.linux-armv7l-cpython-37/build/temp.linux-armv7l-cpython-37/p7_hmmfile.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/null2.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/msvfilter.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/optacc.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/mpi.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/decoding.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/vitfilter.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/p7_omx.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/stotrace.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/fwdback.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/p7_oprofile.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/ssvfilter.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/io.o
2023-10-22T14:22:31,397   running build_ext
2023-10-22T14:23:53,707   Compiling pyhmmer/errors.pyx because it changed.
2023-10-22T14:23:53,708   Compiling pyhmmer/easel.pyx because it changed.
2023-10-22T14:23:53,708   Compiling pyhmmer/plan7.pyx because it changed.
2023-10-22T14:23:53,709   Compiling pyhmmer/daemon.pyx because it changed.
2023-10-22T14:23:53,709   [1/4] Cythonizing pyhmmer/daemon.pyx
2023-10-22T14:23:53,709   [2/4] Cythonizing pyhmmer/easel.pyx
2023-10-22T14:23:53,709   [3/4] Cythonizing pyhmmer/errors.pyx
2023-10-22T14:23:53,710   [4/4] Cythonizing pyhmmer/plan7.pyx
2023-10-22T14:23:53,715   creating tmp
2023-10-22T14:23:53,717   creating tmp/pip-wheel-1us7h8ol
2023-10-22T14:23:53,720   creating tmp/pip-wheel-1us7h8ol/pyhmmer_5b60b33fc77d466c88bb3ac5ae961139
2023-10-22T14:23:53,723   creating tmp/pip-wheel-1us7h8ol/pyhmmer_5b60b33fc77d466c88bb3ac5ae961139/build
2023-10-22T14:23:53,725   creating tmp/pip-wheel-1us7h8ol/pyhmmer_5b60b33fc77d466c88bb3ac5ae961139/build/temp.linux-armv7l-cpython-37
2023-10-22T14:23:53,728   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -I/usr/include/python3.7m -c /tmp/pip-wheel-1us7h8ol/pyhmmer_5b60b33fc77d466c88bb3ac5ae961139/build/temp.linux-armv7l-cpython-37/have_getidmcodbt9s.c -o tmp/pip-wheel-1us7h8ol/pyhmmer_5b60b33fc77d466c88bb3ac5ae961139/build/temp.linux-armv7l-cpython-37/have_getidmcodbt9s.o -Werror=implicit-function-declaration
2023-10-22T14:23:54,540   building 'pyhmmer.errors' extension
2023-10-22T14:23:54,542   creating build/temp.linux-armv7l-cpython-37/pyhmmer
2023-10-22T14:23:54,545   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -DHAS_PYINTERPRETERSTATE_GETID=1 -DeslENABLE_NEON=1 -DCYTHON_WITHOUT_ASSERTIONS=1 -Ibuild/temp.linux-armv7l-cpython-37 -Ivendor/easel -I/usr/include/python3.7m -c pyhmmer/errors.c -o build/temp.linux-armv7l-cpython-37/pyhmmer/errors.o -mfpu=neon -Wno-unused-variable
2023-10-22T14:24:30,023   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro build/temp.linux-armv7l-cpython-37/pyhmmer/errors.o build/temp.linux-armv7l-cpython-37/libeasel.a -Lbuild/temp.linux-armv7l-cpython-37 -L/usr/lib -Lbuild/temp.linux-armv7l-cpython-37 -leasel -ldivsufsort -leasel -lhmmer -o build/lib.linux-armv7l-cpython-37/pyhmmer/errors.cpython-37m-arm-linux-gnueabihf.so -mfpu=neon
2023-10-22T14:24:56,677   building 'pyhmmer.easel' extension
2023-10-22T14:24:56,680   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -DHAS_PYINTERPRETERSTATE_GETID=1 -DeslENABLE_NEON=1 -DCYTHON_WITHOUT_ASSERTIONS=1 -Ibuild/temp.linux-armv7l-cpython-37 -Ivendor/easel -I/usr/include/python3.7m -c pyhmmer/easel.c -o build/temp.linux-armv7l-cpython-37/pyhmmer/easel.o -mfpu=neon -Wno-unused-variable
2023-10-22T14:24:57,530   In file included from pyhmmer/easel.c:1236:
2023-10-22T14:24:57,531   pyhmmer/fileobj/linux.h: In function ‘fileobj_linux_read’:
2023-10-22T14:24:57,531   pyhmmer/fileobj/linux.h:48:13: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:24:57,532        if (len > size) {
2023-10-22T14:24:57,532                ^
2023-10-22T14:33:45,102   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro build/temp.linux-armv7l-cpython-37/pyhmmer/easel.o build/temp.linux-armv7l-cpython-37/libeasel.a -Lbuild/temp.linux-armv7l-cpython-37 -L/usr/lib -Lbuild/temp.linux-armv7l-cpython-37 -leasel -ldivsufsort -leasel -lhmmer -o build/lib.linux-armv7l-cpython-37/pyhmmer/easel.cpython-37m-arm-linux-gnueabihf.so -mfpu=neon
2023-10-22T14:42:03,492   vendor/easel/esl_sqio.h:124:13: warning: type of ‘esl_sqfile_Open’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,493    extern int  esl_sqfile_Open(const char *seqfile, int fmt, const char *env, ESL_SQFILE **ret_sqfp);
2023-10-22T14:42:03,493                ^
2023-10-22T14:42:03,493   vendor/easel/esl_sqio.c:85:1: note: ‘esl_sqfile_Open’ was previously declared here
2023-10-22T14:42:03,494    esl_sqfile_Open(const char *filename, int format, const char *env, ESL_SQFILE **ret_sqfp)
2023-10-22T14:42:03,494    ^
2023-10-22T14:42:03,494   vendor/easel/esl_sqio.c:85:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,495   vendor/easel/esl_sqio.h:128:13: warning: type of ‘esl_sqfile_SetDigital’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,495    extern int  esl_sqfile_SetDigital(ESL_SQFILE *sqfp, const ESL_ALPHABET *abc);
2023-10-22T14:42:03,495                ^
2023-10-22T14:42:03,495   vendor/easel/esl_sqio.c:286:1: note: ‘esl_sqfile_SetDigital’ was previously declared here
2023-10-22T14:42:03,496    esl_sqfile_SetDigital(ESL_SQFILE *sqfp, const ESL_ALPHABET *abc)
2023-10-22T14:42:03,496    ^
2023-10-22T14:42:03,496   vendor/easel/esl_sqio.c:286:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,497   vendor/easel/esl_sq.h:164:16: warning: type of ‘esl_sq_IsDigital’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,497    extern int     esl_sq_IsDigital(const ESL_SQ *sq);
2023-10-22T14:42:03,497                   ^
2023-10-22T14:42:03,498   vendor/easel/esl_sq.c:492:1: note: ‘esl_sq_IsDigital’ was previously declared here
2023-10-22T14:42:03,498    esl_sq_IsDigital(const ESL_SQ *sq)
2023-10-22T14:42:03,498    ^
2023-10-22T14:42:03,499   vendor/easel/esl_sq.c:492:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,499   pyhmmer/reexports/esl_sqio_ascii.h:18:7: warning: type of ‘sqascii_GuessFileFormat’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,499    int   sqascii_GuessFileFormat(ESL_SQFILE *sqfp, int *ret_fmt);
2023-10-22T14:42:03,500          ^
2023-10-22T14:42:03,500   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:373:1: note: ‘sqascii_GuessFileFormat’ was previously declared here
2023-10-22T14:42:03,500    sqascii_GuessFileFormat(ESL_SQFILE *sqfp, int *ret_fmt)
2023-10-22T14:42:03,500    ^
2023-10-22T14:42:03,501   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:373:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,501   pyhmmer/reexports/esl_sqio_ascii.h:51:6: warning: type of ‘config_embl’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,501    void config_embl(ESL_SQFILE *sqfp);
2023-10-22T14:42:03,502         ^
2023-10-22T14:42:03,502   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:2531:1: note: ‘config_embl’ was previously declared here
2023-10-22T14:42:03,502    config_embl(ESL_SQFILE *sqfp)
2023-10-22T14:42:03,502    ^
2023-10-22T14:42:03,503   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:2531:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,503   pyhmmer/reexports/esl_sqio_ascii.h:52:6: warning: type of ‘inmap_embl’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,503    void inmap_embl (ESL_SQFILE *sqfp, const ESL_DSQ *abc_inmap);
2023-10-22T14:42:03,504         ^
2023-10-22T14:42:03,504   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:2543:1: note: ‘inmap_embl’ was previously declared here
2023-10-22T14:42:03,504    inmap_embl(ESL_SQFILE *sqfp, const ESL_DSQ *abc_inmap)
2023-10-22T14:42:03,505    ^
2023-10-22T14:42:03,505   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:2543:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,505   pyhmmer/reexports/esl_sqio_ascii.h:58:6: warning: type of ‘config_genbank’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,505    void config_genbank(ESL_SQFILE *sqfp);
2023-10-22T14:42:03,506         ^
2023-10-22T14:42:03,506   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:2780:1: note: ‘config_genbank’ was previously declared here
2023-10-22T14:42:03,506    config_genbank(ESL_SQFILE *sqfp)
2023-10-22T14:42:03,507    ^
2023-10-22T14:42:03,507   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:2780:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,507   pyhmmer/reexports/esl_sqio_ascii.h:59:6: warning: type of ‘inmap_genbank’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,508    void inmap_genbank (ESL_SQFILE *sqfp, const ESL_DSQ *abc_inmap);
2023-10-22T14:42:03,508         ^
2023-10-22T14:42:03,508   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:2792:1: note: ‘inmap_genbank’ was previously declared here
2023-10-22T14:42:03,508    inmap_genbank(ESL_SQFILE *sqfp, const ESL_DSQ *abc_inmap)
2023-10-22T14:42:03,509    ^
2023-10-22T14:42:03,509   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:2792:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,509   pyhmmer/reexports/esl_sqio_ascii.h:65:6: warning: type of ‘config_fasta’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,509    void config_fasta(ESL_SQFILE *sqfp);
2023-10-22T14:42:03,510         ^
2023-10-22T14:42:03,510   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:2954:1: note: ‘config_fasta’ was previously declared here
2023-10-22T14:42:03,510    config_fasta(ESL_SQFILE *sqfp)
2023-10-22T14:42:03,511    ^
2023-10-22T14:42:03,511   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:2954:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,511   pyhmmer/reexports/esl_sqio_ascii.h:66:6: warning: type of ‘inmap_fasta’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,512    void inmap_fasta (ESL_SQFILE *sqfp, const ESL_DSQ *abc_inmap);
2023-10-22T14:42:03,512         ^
2023-10-22T14:42:03,512   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:2966:1: note: ‘inmap_fasta’ was previously declared here
2023-10-22T14:42:03,512    inmap_fasta(ESL_SQFILE *sqfp, const ESL_DSQ *abc_inmap)
2023-10-22T14:42:03,513    ^
2023-10-22T14:42:03,513   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:2966:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,513   pyhmmer/reexports/esl_sqio_ascii.h:72:6: warning: type of ‘config_daemon’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,514    void config_daemon(ESL_SQFILE *sqfp);
2023-10-22T14:42:03,514         ^
2023-10-22T14:42:03,514   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:3198:1: note: ‘config_daemon’ was previously declared here
2023-10-22T14:42:03,514    config_daemon(ESL_SQFILE *sqfp)
2023-10-22T14:42:03,515    ^
2023-10-22T14:42:03,515   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:3198:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,515   pyhmmer/reexports/esl_sqio_ascii.h:73:6: warning: type of ‘inmap_daemon’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,516    void inmap_daemon (ESL_SQFILE *sqfp, const ESL_DSQ *abc_inmap);
2023-10-22T14:42:03,516         ^
2023-10-22T14:42:03,517   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:3210:1: note: ‘inmap_daemon’ was previously declared here
2023-10-22T14:42:03,517    inmap_daemon(ESL_SQFILE *sqfp, const ESL_DSQ *abc_inmap)
2023-10-22T14:42:03,518    ^
2023-10-22T14:42:03,518   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:3210:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,518   pyhmmer/reexports/esl_sqio_ascii.h:42:6: warning: type of ‘loadbuf’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,519    int  loadbuf  (ESL_SQFILE *sqfp);
2023-10-22T14:42:03,519         ^
2023-10-22T14:42:03,519   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:2117:1: note: ‘loadbuf’ was previously declared here
2023-10-22T14:42:03,519    loadbuf(ESL_SQFILE *sqfp)
2023-10-22T14:42:03,520    ^
2023-10-22T14:42:03,520   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:2117:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,520   pyhmmer/reexports/esl_sqio_ascii.h:77:6: warning: type of ‘fileheader_hmmpgmd’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,520    int  fileheader_hmmpgmd(ESL_SQFILE *sqfp);
2023-10-22T14:42:03,521         ^
2023-10-22T14:42:03,521   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:3379:1: note: ‘fileheader_hmmpgmd’ was previously declared here
2023-10-22T14:42:03,521    fileheader_hmmpgmd(ESL_SQFILE *sqfp)
2023-10-22T14:42:03,522    ^
2023-10-22T14:42:03,522   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:3379:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,522   vendor/easel/esl_sqio_ascii.h:81:13: warning: type of ‘esl_sqascii_WriteFasta’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,522    extern int  esl_sqascii_WriteFasta(FILE *fp, ESL_SQ *s, int update);
2023-10-22T14:42:03,523                ^
2023-10-22T14:42:03,523   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:3159:1: note: ‘esl_sqascii_WriteFasta’ was previously declared here
2023-10-22T14:42:03,523    esl_sqascii_WriteFasta(FILE *fp, ESL_SQ *sq, int save_offsets)
2023-10-22T14:42:03,524    ^
2023-10-22T14:42:03,524   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:3159:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,524   vendor/easel/esl_msafile.h:123:12: warning: type of ‘esl_msafile_Write’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,525    extern int esl_msafile_Write(FILE *fp, ESL_MSA *msa, int fmt);
2023-10-22T14:42:03,525               ^
2023-10-22T14:42:03,525   vendor/easel/esl_msafile.c:1100:1: note: ‘esl_msafile_Write’ was previously declared here
2023-10-22T14:42:03,525    esl_msafile_Write(FILE *fp, ESL_MSA *msa, int fmt)
2023-10-22T14:42:03,526    ^
2023-10-22T14:42:03,526   vendor/easel/esl_msafile.c:1100:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,526   vendor/easel/esl_msa.h:198:17: warning: type of ‘esl_msa_Compare’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,527    extern int      esl_msa_Compare         (ESL_MSA *a1, ESL_MSA *a2);
2023-10-22T14:42:03,527                    ^
2023-10-22T14:42:03,527   vendor/easel/esl_msa.c:3204:1: note: ‘esl_msa_Compare’ was previously declared here
2023-10-22T14:42:03,527    esl_msa_Compare(ESL_MSA *a1, ESL_MSA *a2)
2023-10-22T14:42:03,528    ^
2023-10-22T14:42:03,528   vendor/easel/esl_msa.c:3204:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,528   vendor/easel/esl_msa.h:152:12: warning: type of ‘esl_msa_SetAccession’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,529    extern int esl_msa_SetAccession     (ESL_MSA *msa, const char *s, esl_pos_t n);
2023-10-22T14:42:03,529               ^
2023-10-22T14:42:03,529   vendor/easel/esl_msa.c:1090:1: note: ‘esl_msa_SetAccession’ was previously declared here
2023-10-22T14:42:03,529    esl_msa_SetAccession(ESL_MSA *msa, const char *s, esl_pos_t n)
2023-10-22T14:42:03,530    ^
2023-10-22T14:42:03,530   vendor/easel/esl_msa.c:1090:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,530   vendor/easel/esl_msa.h:153:12: warning: type of ‘esl_msa_SetAuthor’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,531    extern int esl_msa_SetAuthor        (ESL_MSA *msa, const char *s, esl_pos_t n);
2023-10-22T14:42:03,531               ^
2023-10-22T14:42:03,531   vendor/easel/esl_msa.c:1118:1: note: ‘esl_msa_SetAuthor’ was previously declared here
2023-10-22T14:42:03,531    esl_msa_SetAuthor(ESL_MSA *msa, const char *s, esl_pos_t n)
2023-10-22T14:42:03,532    ^
2023-10-22T14:42:03,532   vendor/easel/esl_msa.c:1118:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,532   vendor/easel/esl_msa.h:150:12: warning: type of ‘esl_msa_SetName’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,532    extern int esl_msa_SetName          (ESL_MSA *msa, const char *s, esl_pos_t n);
2023-10-22T14:42:03,533               ^
2023-10-22T14:42:03,533   vendor/easel/esl_msa.c:1035:1: note: ‘esl_msa_SetName’ was previously declared here
2023-10-22T14:42:03,533    esl_msa_SetName(ESL_MSA *msa, const char *s, esl_pos_t n)
2023-10-22T14:42:03,534    ^
2023-10-22T14:42:03,534   vendor/easel/esl_msa.c:1035:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,534   vendor/easel/esl_msa.h:151:12: warning: type of ‘esl_msa_SetDesc’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,534    extern int esl_msa_SetDesc          (ESL_MSA *msa, const char *s, esl_pos_t n);
2023-10-22T14:42:03,535               ^
2023-10-22T14:42:03,535   vendor/easel/esl_msa.c:1063:1: note: ‘esl_msa_SetDesc’ was previously declared here
2023-10-22T14:42:03,535    esl_msa_SetDesc(ESL_MSA *msa, const char *s, esl_pos_t n)
2023-10-22T14:42:03,536    ^
2023-10-22T14:42:03,536   vendor/easel/esl_msa.c:1063:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,536   vendor/easel/esl_sq.h:193:16: warning: type of ‘esl_sq_FetchFromMSA’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,536    extern int     esl_sq_FetchFromMSA(const ESL_MSA *msa, int which, ESL_SQ **ret_sq);
2023-10-22T14:42:03,537                   ^
2023-10-22T14:42:03,537   vendor/easel/esl_sq.c:1884:1: note: ‘esl_sq_FetchFromMSA’ was previously declared here
2023-10-22T14:42:03,537    esl_sq_FetchFromMSA(const ESL_MSA *msa, int which, ESL_SQ **ret_sq)
2023-10-22T14:42:03,538    ^
2023-10-22T14:42:03,538   vendor/easel/esl_sq.c:1884:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,538   vendor/easel/esl_msa.h:140:17: warning: type of ‘esl_msa_Destroy’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,538    extern void     esl_msa_Destroy(ESL_MSA *msa);
2023-10-22T14:42:03,539                    ^
2023-10-22T14:42:03,539   vendor/easel/esl_msa.c:505:1: note: ‘esl_msa_Destroy’ was previously declared here
2023-10-22T14:42:03,539    esl_msa_Destroy(ESL_MSA *msa)
2023-10-22T14:42:03,540    ^
2023-10-22T14:42:03,540   vendor/easel/esl_msa.c:505:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,540   vendor/easel/esl_sq.h:169:16: warning: type of ‘esl_sq_SetAccession’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,540    extern int     esl_sq_SetAccession   (ESL_SQ *sq, const char *acc);
2023-10-22T14:42:03,541                   ^
2023-10-22T14:42:03,541   vendor/easel/esl_sq.c:1087:1: note: ‘esl_sq_SetAccession’ was previously declared here
2023-10-22T14:42:03,541    esl_sq_SetAccession(ESL_SQ *sq, const char *acc)
2023-10-22T14:42:03,541    ^
2023-10-22T14:42:03,542   vendor/easel/esl_sq.c:1087:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,542   vendor/easel/esl_sq.h:168:16: warning: type of ‘esl_sq_SetName’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,543    extern int     esl_sq_SetName        (ESL_SQ *sq, const char *name);
2023-10-22T14:42:03,543                   ^
2023-10-22T14:42:03,543   vendor/easel/esl_sq.c:1049:1: note: ‘esl_sq_SetName’ was previously declared here
2023-10-22T14:42:03,543    esl_sq_SetName(ESL_SQ *sq, const char *name)
2023-10-22T14:42:03,544    ^
2023-10-22T14:42:03,544   vendor/easel/esl_sq.c:1049:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,544   vendor/easel/esl_sq.h:170:16: warning: type of ‘esl_sq_SetDesc’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,545    extern int     esl_sq_SetDesc        (ESL_SQ *sq, const char *desc);
2023-10-22T14:42:03,545                   ^
2023-10-22T14:42:03,545   vendor/easel/esl_sq.c:1127:1: note: ‘esl_sq_SetDesc’ was previously declared here
2023-10-22T14:42:03,545    esl_sq_SetDesc(ESL_SQ *sq, const char *desc)
2023-10-22T14:42:03,546    ^
2023-10-22T14:42:03,546   vendor/easel/esl_sq.c:1127:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,547   vendor/easel/esl_sq.h:171:16: warning: type of ‘esl_sq_SetSource’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,547    extern int     esl_sq_SetSource      (ESL_SQ *sq, const char *source);
2023-10-22T14:42:03,547                   ^
2023-10-22T14:42:03,547   vendor/easel/esl_sq.c:1165:1: note: ‘esl_sq_SetSource’ was previously declared here
2023-10-22T14:42:03,548    esl_sq_SetSource(ESL_SQ *sq, const char *source)
2023-10-22T14:42:03,548    ^
2023-10-22T14:42:03,548   vendor/easel/esl_sq.c:1165:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,549   vendor/easel/esl_sq.h:165:16: warning: type of ‘esl_sq_IsText’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,549    extern int     esl_sq_IsText   (const ESL_SQ *sq);
2023-10-22T14:42:03,549                   ^
2023-10-22T14:42:03,549   vendor/easel/esl_sq.c:506:1: note: ‘esl_sq_IsText’ was previously declared here
2023-10-22T14:42:03,550    esl_sq_IsText(const ESL_SQ *sq)
2023-10-22T14:42:03,550    ^
2023-10-22T14:42:03,550   vendor/easel/esl_sq.c:506:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,550   vendor/easel/esl_sq.h:166:16: warning: type of ‘esl_sq_Destroy’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,551    extern void    esl_sq_Destroy  (ESL_SQ *sq);
2023-10-22T14:42:03,551                   ^
2023-10-22T14:42:03,551   vendor/easel/esl_sq.c:550:1: note: ‘esl_sq_Destroy’ was previously declared here
2023-10-22T14:42:03,552    esl_sq_Destroy(ESL_SQ *sq)
2023-10-22T14:42:03,552    ^
2023-10-22T14:42:03,552   vendor/easel/esl_sq.c:550:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,552   vendor/easel/esl_msa.h:136:17: warning: type of ‘esl_msa_Create’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,553    extern ESL_MSA *esl_msa_Create(int nseq, int64_t alen);
2023-10-22T14:42:03,553                    ^
2023-10-22T14:42:03,553   vendor/easel/esl_msa.c:86:1: note: ‘esl_msa_Create’ was previously declared here
2023-10-22T14:42:03,554    esl_msa_Create(int nseq, int64_t alen)
2023-10-22T14:42:03,554    ^
2023-10-22T14:42:03,554   vendor/easel/esl_msa.c:86:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,554   vendor/easel/esl_sqio.h:136:14: warning: type of ‘esl_sqio_Parse’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,555    extern int   esl_sqio_Parse       (char *buffer, int size, ESL_SQ *s, int format);
2023-10-22T14:42:03,555                 ^
2023-10-22T14:42:03,555   vendor/easel/esl_sqio.c:543:1: note: ‘esl_sqio_Parse’ was previously declared here
2023-10-22T14:42:03,555    esl_sqio_Parse(char *buf, int size, ESL_SQ *s, int format)
2023-10-22T14:42:03,556    ^
2023-10-22T14:42:03,556   vendor/easel/esl_sqio.c:543:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,556   vendor/easel/esl_sqio.h:131:14: warning: type of ‘esl_sqio_Read’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,557    extern int   esl_sqio_Read        (ESL_SQFILE *sqfp, ESL_SQ *sq);
2023-10-22T14:42:03,557                 ^
2023-10-22T14:42:03,557   vendor/easel/esl_sqio.c:356:1: note: ‘esl_sqio_Read’ was previously declared here
2023-10-22T14:42:03,557    esl_sqio_Read(ESL_SQFILE *sqfp, ESL_SQ *sq)
2023-10-22T14:42:03,558    ^
2023-10-22T14:42:03,558   vendor/easel/esl_sqio.c:356:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,558   vendor/easel/esl_sqio.h:132:14: warning: type of ‘esl_sqio_ReadInfo’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,559    extern int   esl_sqio_ReadInfo    (ESL_SQFILE *sqfp, ESL_SQ *sq);
2023-10-22T14:42:03,559                 ^
2023-10-22T14:42:03,559   vendor/easel/esl_sqio.c:378:1: note: ‘esl_sqio_ReadInfo’ was previously declared here
2023-10-22T14:42:03,559    esl_sqio_ReadInfo(ESL_SQFILE *sqfp, ESL_SQ *sq)
2023-10-22T14:42:03,560    ^
2023-10-22T14:42:03,560   vendor/easel/esl_sqio.c:378:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,560   vendor/easel/esl_sqio.h:134:14: warning: type of ‘esl_sqio_ReadSequence’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,561    extern int   esl_sqio_ReadSequence(ESL_SQFILE *sqfp, ESL_SQ *sq);
2023-10-22T14:42:03,561                 ^
2023-10-22T14:42:03,561   vendor/easel/esl_sqio.c:399:1: note: ‘esl_sqio_ReadSequence’ was previously declared here
2023-10-22T14:42:03,561    esl_sqio_ReadSequence(ESL_SQFILE *sqfp, ESL_SQ *sq)
2023-10-22T14:42:03,562    ^
2023-10-22T14:42:03,562   vendor/easel/esl_sqio.c:399:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,562   vendor/easel/esl_msa.h:145:17: warning: type of ‘esl_msa_Digitize’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,562    extern int      esl_msa_Digitize(const ESL_ALPHABET *abc, ESL_MSA *msa, char *errmsg);
2023-10-22T14:42:03,563                    ^
2023-10-22T14:42:03,563   vendor/easel/esl_msa.c:875:1: note: ‘esl_msa_Digitize’ was previously declared here
2023-10-22T14:42:03,563    esl_msa_Digitize(const ESL_ALPHABET *abc, ESL_MSA *msa, char *errbuf)
2023-10-22T14:42:03,564    ^
2023-10-22T14:42:03,564   vendor/easel/esl_msa.c:875:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,564   vendor/easel/esl_msafile.h:119:13: warning: type of ‘esl_msafile_Read’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,564    extern int  esl_msafile_Read(ESL_MSAFILE *afp, ESL_MSA **ret_msa);
2023-10-22T14:42:03,565                ^
2023-10-22T14:42:03,565   vendor/easel/esl_msafile.c:997:1: note: ‘esl_msafile_Read’ was previously declared here
2023-10-22T14:42:03,565    esl_msafile_Read(ESL_MSAFILE *afp, ESL_MSA **ret_msa)
2023-10-22T14:42:03,565    ^
2023-10-22T14:42:03,566   vendor/easel/esl_msafile.c:997:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,566   vendor/easel/esl_sqio.h:129:13: warning: type of ‘esl_sqfile_GuessAlphabet’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,566    extern int  esl_sqfile_GuessAlphabet(ESL_SQFILE *sqfp, int *ret_type);
2023-10-22T14:42:03,567                ^
2023-10-22T14:42:03,567   vendor/easel/esl_sqio.c:322:1: note: ‘esl_sqfile_GuessAlphabet’ was previously declared here
2023-10-22T14:42:03,567    esl_sqfile_GuessAlphabet(ESL_SQFILE *sqfp, int *ret_type)
2023-10-22T14:42:03,568    ^
2023-10-22T14:42:03,568   vendor/easel/esl_sqio.c:322:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,568   vendor/easel/esl_sqio.h:141:14: warning: type of ‘esl_sqfile_GetErrorBuf’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,568    const char  *esl_sqfile_GetErrorBuf(const ESL_SQFILE *sqfp);
2023-10-22T14:42:03,569                 ^
2023-10-22T14:42:03,569   vendor/easel/esl_sqio.c:660:1: note: ‘esl_sqfile_GetErrorBuf’ was previously declared here
2023-10-22T14:42:03,569    esl_sqfile_GetErrorBuf(const ESL_SQFILE *sqfp)
2023-10-22T14:42:03,570    ^
2023-10-22T14:42:03,570   vendor/easel/esl_sqio.c:660:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,570   vendor/easel/esl_msa.h:186:12: warning: type of ‘esl_msa_Checksum’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,570    extern int esl_msa_Checksum(const ESL_MSA *msa, uint32_t *ret_checksum);
2023-10-22T14:42:03,571               ^
2023-10-22T14:42:03,571   vendor/easel/esl_msa.c:2802:1: note: ‘esl_msa_Checksum’ was previously declared here
2023-10-22T14:42:03,571    esl_msa_Checksum(const ESL_MSA *msa, uint32_t *ret_checksum)
2023-10-22T14:42:03,571    ^
2023-10-22T14:42:03,572   vendor/easel/esl_msa.c:2802:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,572   vendor/easel/esl_sq.h:180:16: warning: type of ‘esl_sq_Checksum’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,572    extern int     esl_sq_Checksum(const ESL_SQ *sq, uint32_t *ret_checksum);
2023-10-22T14:42:03,573                   ^
2023-10-22T14:42:03,573   vendor/easel/esl_sq.c:1631:1: note: ‘esl_sq_Checksum’ was previously declared here
2023-10-22T14:42:03,573    esl_sq_Checksum(const ESL_SQ *sq, uint32_t *ret_checksum)
2023-10-22T14:42:03,573    ^
2023-10-22T14:42:03,574   vendor/easel/esl_sq.c:1631:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,574   vendor/easel/esl_msa.h:146:17: warning: type of ‘esl_msa_Textize’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,574    extern int      esl_msa_Textize(ESL_MSA *msa);
2023-10-22T14:42:03,575                    ^
2023-10-22T14:42:03,575   vendor/easel/esl_msa.c:935:1: note: ‘esl_msa_Textize’ was previously declared here
2023-10-22T14:42:03,575    esl_msa_Textize(ESL_MSA *msa)
2023-10-22T14:42:03,575    ^
2023-10-22T14:42:03,576   vendor/easel/esl_msa.c:935:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,576   vendor/easel/esl_msa.h:139:17: warning: type of ‘esl_msa_Clone’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,576    extern ESL_MSA *esl_msa_Clone(const ESL_MSA *msa);
2023-10-22T14:42:03,577                    ^
2023-10-22T14:42:03,577   vendor/easel/esl_msa.c:407:1: note: ‘esl_msa_Clone’ was previously declared here
2023-10-22T14:42:03,577    esl_msa_Clone(const ESL_MSA *msa)
2023-10-22T14:42:03,577    ^
2023-10-22T14:42:03,578   vendor/easel/esl_msa.c:407:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,578   vendor/easel/esl_sq.h:183:16: warning: type of ‘esl_sq_CreateDigital’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,578    extern ESL_SQ *esl_sq_CreateDigital(const ESL_ALPHABET *abc);
2023-10-22T14:42:03,579                   ^
2023-10-22T14:42:03,579   vendor/easel/esl_sq.c:730:1: note: ‘esl_sq_CreateDigital’ was previously declared here
2023-10-22T14:42:03,579    esl_sq_CreateDigital(const ESL_ALPHABET *abc)
2023-10-22T14:42:03,579    ^
2023-10-22T14:42:03,580   vendor/easel/esl_sq.c:730:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,580   vendor/easel/esl_msa.h:192:12: warning: type of ‘esl_msa_Hash’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,580    extern int esl_msa_Hash(ESL_MSA *msa);
2023-10-22T14:42:03,580               ^
2023-10-22T14:42:03,581   vendor/easel/esl_msa.c:3050:1: note: ‘esl_msa_Hash’ was previously declared here
2023-10-22T14:42:03,581    esl_msa_Hash(ESL_MSA *msa)
2023-10-22T14:42:03,582    ^
2023-10-22T14:42:03,582   vendor/easel/esl_msa.c:3050:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,582   vendor/easel/esl_msa.h:154:12: warning: type of ‘esl_msa_SetSeqName’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,582    extern int esl_msa_SetSeqName       (ESL_MSA *msa, int idx, const char *s, esl_pos_t n);
2023-10-22T14:42:03,583               ^
2023-10-22T14:42:03,583   vendor/easel/esl_msa.c:1147:1: note: ‘esl_msa_SetSeqName’ was previously declared here
2023-10-22T14:42:03,583    esl_msa_SetSeqName(ESL_MSA *msa, int idx, const char *s, esl_pos_t n)
2023-10-22T14:42:03,584    ^
2023-10-22T14:42:03,584   vendor/easel/esl_msa.c:1147:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,584   vendor/easel/esl_msa.h:155:12: warning: type of ‘esl_msa_SetSeqAccession’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,584    extern int esl_msa_SetSeqAccession  (ESL_MSA *msa, int idx, const char *s, esl_pos_t n);
2023-10-22T14:42:03,585               ^
2023-10-22T14:42:03,585   vendor/easel/esl_msa.c:1178:1: note: ‘esl_msa_SetSeqAccession’ was previously declared here
2023-10-22T14:42:03,585    esl_msa_SetSeqAccession(ESL_MSA *msa, int idx, const char *s, esl_pos_t n)
2023-10-22T14:42:03,585    ^
2023-10-22T14:42:03,586   vendor/easel/esl_msa.c:1178:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,586   vendor/easel/esl_msa.h:156:12: warning: type of ‘esl_msa_SetSeqDescription’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,586    extern int esl_msa_SetSeqDescription(ESL_MSA *msa, int idx, const char *s, esl_pos_t n);
2023-10-22T14:42:03,587               ^
2023-10-22T14:42:03,587   vendor/easel/esl_msa.c:1230:1: note: ‘esl_msa_SetSeqDescription’ was previously declared here
2023-10-22T14:42:03,587    esl_msa_SetSeqDescription(ESL_MSA *msa, int idx, const char *s, esl_pos_t n)
2023-10-22T14:42:03,587    ^
2023-10-22T14:42:03,588   vendor/easel/esl_msa.c:1230:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,588   vendor/easel/esl_msa.h:144:17: warning: type of ‘esl_msa_CreateDigital’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,588    extern ESL_MSA *esl_msa_CreateDigital(const ESL_ALPHABET *abc, int nseq, int64_t alen);
2023-10-22T14:42:03,589                    ^
2023-10-22T14:42:03,589   vendor/easel/esl_msa.c:811:1: note: ‘esl_msa_CreateDigital’ was previously declared here
2023-10-22T14:42:03,589    esl_msa_CreateDigital(const ESL_ALPHABET *abc, int nseq, int64_t alen)
2023-10-22T14:42:03,589    ^
2023-10-22T14:42:03,590   vendor/easel/esl_msa.c:811:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,590   vendor/easel/esl_sq.h:157:16: warning: type of ‘esl_sq_CreateFrom’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,590    extern ESL_SQ *esl_sq_CreateFrom(const char *name, const char *seq,
2023-10-22T14:42:03,591                   ^
2023-10-22T14:42:03,591   vendor/easel/esl_sq.c:93:1: note: ‘esl_sq_CreateFrom’ was previously declared here
2023-10-22T14:42:03,591    esl_sq_CreateFrom(const char *name, const char *seq, const char *desc, const char *acc, const char *ss)
2023-10-22T14:42:03,591    ^
2023-10-22T14:42:03,592   vendor/easel/esl_sq.c:93:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,592   vendor/easel/esl_sq.h:156:16: warning: type of ‘esl_sq_Create’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,592    extern ESL_SQ *esl_sq_Create(void);
2023-10-22T14:42:03,593                   ^
2023-10-22T14:42:03,593   vendor/easel/esl_sq.c:58:1: note: ‘esl_sq_Create’ was previously declared here
2023-10-22T14:42:03,593    esl_sq_Create(void)
2023-10-22T14:42:03,594    ^
2023-10-22T14:42:03,594   vendor/easel/esl_sq.c:58:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,594   vendor/easel/esl_sq.h:179:16: warning: type of ‘esl_sq_ReverseComplement’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,595    extern int     esl_sq_ReverseComplement(ESL_SQ *sq);
2023-10-22T14:42:03,595                   ^
2023-10-22T14:42:03,595   vendor/easel/esl_sq.c:1536:1: note: ‘esl_sq_ReverseComplement’ was previously declared here
2023-10-22T14:42:03,596    esl_sq_ReverseComplement(ESL_SQ *sq)
2023-10-22T14:42:03,596    ^
2023-10-22T14:42:03,596   vendor/easel/esl_sq.c:1536:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,597   vendor/easel/esl_sq.h:162:16: warning: type of ‘esl_sq_Compare’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,597    extern int     esl_sq_Compare  (ESL_SQ *sq1, ESL_SQ *sq2);
2023-10-22T14:42:03,597                   ^
2023-10-22T14:42:03,597   vendor/easel/esl_sq.c:373:1: note: ‘esl_sq_Compare’ was previously declared here
2023-10-22T14:42:03,598    esl_sq_Compare(ESL_SQ *sq1, ESL_SQ *sq2)
2023-10-22T14:42:03,598    ^
2023-10-22T14:42:03,598   vendor/easel/esl_sq.c:373:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,599   vendor/easel/esl_sq.h:160:16: warning: type of ‘esl_sq_GrowTo’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,599    extern int     esl_sq_GrowTo(ESL_SQ *sq, int64_t  n);
2023-10-22T14:42:03,599                   ^
2023-10-22T14:42:03,600   vendor/easel/esl_sq.c:209:1: note: ‘esl_sq_GrowTo’ was previously declared here
2023-10-22T14:42:03,600    esl_sq_GrowTo(ESL_SQ *sq, int64_t n)
2023-10-22T14:42:03,600    ^
2023-10-22T14:42:03,601   vendor/easel/esl_sq.c:209:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,601   vendor/easel/esl_ssi.h:111:13: warning: type of ‘esl_ssi_Open’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,601    extern int  esl_ssi_Open(const char *filename, ESL_SSI **ret_ssi);
2023-10-22T14:42:03,601                ^
2023-10-22T14:42:03,602   vendor/easel/esl_ssi.c:51:1: note: ‘esl_ssi_Open’ was previously declared here
2023-10-22T14:42:03,602    esl_ssi_Open(const char *filename, ESL_SSI **ret_ssi)
2023-10-22T14:42:03,602    ^
2023-10-22T14:42:03,603   vendor/easel/esl_ssi.c:51:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,603   vendor/easel/esl_ssi.h:127:13: warning: type of ‘esl_newssi_AddKey’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,603    extern int  esl_newssi_AddKey   (ESL_NEWSSI *ns, const char *key, uint16_t fh, off_t r_off, off_t d_off, int64_t L);
2023-10-22T14:42:03,604                ^
2023-10-22T14:42:03,604   vendor/easel/esl_ssi.c:843:1: note: type mismatch in parameter 4
2023-10-22T14:42:03,604    esl_newssi_AddKey(ESL_NEWSSI *ns, const char *key, uint16_t fh,
2023-10-22T14:42:03,604    ^
2023-10-22T14:42:03,605   vendor/easel/esl_ssi.c:843:1: note: ‘esl_newssi_AddKey’ was previously declared here
2023-10-22T14:42:03,605   vendor/easel/esl_ssi.c:843:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,605   vendor/easel/esl_sq.h:163:16: warning: type of ‘esl_sq_Reuse’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,606    extern int     esl_sq_Reuse    (ESL_SQ *sq);
2023-10-22T14:42:03,606                   ^
2023-10-22T14:42:03,606   vendor/easel/esl_sq.c:443:1: note: ‘esl_sq_Reuse’ was previously declared here
2023-10-22T14:42:03,607    esl_sq_Reuse(ESL_SQ *sq)
2023-10-22T14:42:03,607    ^
2023-10-22T14:42:03,607   vendor/easel/esl_sq.c:443:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,607   vendor/easel/esl_sqio.h:146:14: warning: type of ‘esl_sqfile_Position’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,608    extern int   esl_sqfile_Position(ESL_SQFILE *sqfp, off_t offset);
2023-10-22T14:42:03,608                 ^
2023-10-22T14:42:03,608   vendor/easel/esl_sqio.c:787:1: note: type mismatch in parameter 2
2023-10-22T14:42:03,609    esl_sqfile_Position(ESL_SQFILE *sqfp, off_t offset)
2023-10-22T14:42:03,609    ^
2023-10-22T14:42:03,609   vendor/easel/esl_sqio.c:787:1: note: ‘esl_sqfile_Position’ was previously declared here
2023-10-22T14:42:03,610   vendor/easel/esl_sqio.c:787:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,610   vendor/easel/esl_ssi.h:119:13: warning: type of ‘esl_ssi_FileInfo’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,610    extern int  esl_ssi_FileInfo(ESL_SSI *ssi, uint16_t fh, char **ret_filename, int *ret_format);
2023-10-22T14:42:03,611                ^
2023-10-22T14:42:03,611   vendor/easel/esl_ssi.c:486:1: note: ‘esl_ssi_FileInfo’ was previously declared here
2023-10-22T14:42:03,611    esl_ssi_FileInfo(ESL_SSI *ssi, uint16_t fh, char **ret_filename, int *ret_format)
2023-10-22T14:42:03,611    ^
2023-10-22T14:42:03,612   vendor/easel/esl_ssi.c:486:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,612   vendor/easel/esl_ssi.h:113:13: warning: type of ‘esl_ssi_FindName’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,612    extern int  esl_ssi_FindName(ESL_SSI *ssi, const char *key,
2023-10-22T14:42:03,613                ^
2023-10-22T14:42:03,613   vendor/easel/esl_ssi.c:172:1: note: ‘esl_ssi_FindName’ was previously declared here
2023-10-22T14:42:03,613    esl_ssi_FindName(ESL_SSI *ssi, const char *key, uint16_t *ret_fh, off_t *ret_roff, off_t *opt_doff, int64_t *opt_L)
2023-10-22T14:42:03,614    ^
2023-10-22T14:42:03,614   vendor/easel/esl_ssi.c:172:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,614   vendor/easel/esl_sq.h:161:16: warning: type of ‘esl_sq_Copy’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,614    extern int     esl_sq_Copy(const ESL_SQ *src, ESL_SQ *dst);
2023-10-22T14:42:03,615                   ^
2023-10-22T14:42:03,615   vendor/easel/esl_sq.c:265:1: note: ‘esl_sq_Copy’ was previously declared here
2023-10-22T14:42:03,615    esl_sq_Copy(const ESL_SQ *src, ESL_SQ *dst)
2023-10-22T14:42:03,616    ^
2023-10-22T14:42:03,616   vendor/easel/esl_sq.c:265:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,616   vendor/easel/esl_sqio.h:125:13: warning: type of ‘esl_sqfile_Close’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,617    extern void esl_sqfile_Close(ESL_SQFILE *sqfp);
2023-10-22T14:42:03,617                ^
2023-10-22T14:42:03,617   vendor/easel/esl_sqio.c:99:1: note: ‘esl_sqfile_Close’ was previously declared here
2023-10-22T14:42:03,617    esl_sqfile_Close(ESL_SQFILE *sqfp)
2023-10-22T14:42:03,618    ^
2023-10-22T14:42:03,618   vendor/easel/esl_sqio.c:99:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,619   vendor/easel/esl_ssi.h:112:13: warning: type of ‘esl_ssi_Close’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,619    extern void esl_ssi_Close(ESL_SSI *ssi);
2023-10-22T14:42:03,619                ^
2023-10-22T14:42:03,619   vendor/easel/esl_ssi.c:510:1: note: ‘esl_ssi_Close’ was previously declared here
2023-10-22T14:42:03,620    esl_ssi_Close(ESL_SSI *ssi)
2023-10-22T14:42:03,620    ^
2023-10-22T14:42:03,620   vendor/easel/esl_ssi.c:510:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,621   pyhmmer/reexports/esl_sqio_ascii.h:31:13: warning: type of ‘sqascii_GetError’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,621    const char *sqascii_GetError (const ESL_SQFILE *sqfp);
2023-10-22T14:42:03,621                ^
2023-10-22T14:42:03,622   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:712:1: note: ‘sqascii_GetError’ was previously declared here
2023-10-22T14:42:03,622    sqascii_GetError(const ESL_SQFILE *sqfp)
2023-10-22T14:42:03,622    ^
2023-10-22T14:42:03,622   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:712:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,623   pyhmmer/reexports/esl_sqio_ascii.h:38:7: warning: type of ‘sqascii_FetchSubseq’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,623    int   sqascii_FetchSubseq     (ESL_SQFILE *sqfp, const char *source, int64_t start, int64_t end, ESL_SQ *sq);
2023-10-22T14:42:03,624          ^
2023-10-22T14:42:03,624   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1949:1: note: ‘sqascii_FetchSubseq’ was previously declared here
2023-10-22T14:42:03,624    sqascii_FetchSubseq(ESL_SQFILE *sqfp, const char *source, int64_t start, int64_t end, ESL_SQ *sq)
2023-10-22T14:42:03,625    ^
2023-10-22T14:42:03,625   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1949:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,625   pyhmmer/reexports/esl_sqio_ascii.h:37:7: warning: type of ‘sqascii_FetchInfo’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,626    int   sqascii_FetchInfo       (ESL_SQFILE *sqfp, const char *key, ESL_SQ *sq);
2023-10-22T14:42:03,626          ^
2023-10-22T14:42:03,626   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1905:1: note: ‘sqascii_FetchInfo’ was previously declared here
2023-10-22T14:42:03,627    sqascii_FetchInfo(ESL_SQFILE *sqfp, const char *key, ESL_SQ *sq)
2023-10-22T14:42:03,627    ^
2023-10-22T14:42:03,627   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1905:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,628   pyhmmer/reexports/esl_sqio_ascii.h:36:7: warning: type of ‘sqascii_Fetch’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,628    int   sqascii_Fetch           (ESL_SQFILE *sqfp, const char *key, ESL_SQ *sq);
2023-10-22T14:42:03,628          ^
2023-10-22T14:42:03,629   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1874:1: note: ‘sqascii_Fetch’ was previously declared here
2023-10-22T14:42:03,629    sqascii_Fetch(ESL_SQFILE *sqfp, const char *key, ESL_SQ *sq)
2023-10-22T14:42:03,629    ^
2023-10-22T14:42:03,630   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1874:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,630   pyhmmer/reexports/esl_sqio_ascii.h:35:7: warning: type of ‘sqascii_PositionByNumber’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,630    int   sqascii_PositionByNumber(ESL_SQFILE *sqfp, int which);
2023-10-22T14:42:03,630          ^
2023-10-22T14:42:03,631   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1842:1: note: ‘sqascii_PositionByNumber’ was previously declared here
2023-10-22T14:42:03,631    sqascii_PositionByNumber(ESL_SQFILE *sqfp, int which)
2023-10-22T14:42:03,631    ^
2023-10-22T14:42:03,632   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1842:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,632   pyhmmer/reexports/esl_sqio_ascii.h:34:7: warning: type of ‘sqascii_PositionByKey’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,632    int   sqascii_PositionByKey   (ESL_SQFILE *sqfp, const char *key);
2023-10-22T14:42:03,633          ^
2023-10-22T14:42:03,633   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1794:1: note: ‘sqascii_PositionByKey’ was previously declared here
2023-10-22T14:42:03,634    sqascii_PositionByKey(ESL_SQFILE *sqfp, const char *key)
2023-10-22T14:42:03,634    ^
2023-10-22T14:42:03,634   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1794:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,635   pyhmmer/reexports/esl_sqio_ascii.h:33:7: warning: type of ‘sqascii_OpenSSI’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,635    int   sqascii_OpenSSI         (ESL_SQFILE *sqfp, const char *ssifile_hint);
2023-10-22T14:42:03,635          ^
2023-10-22T14:42:03,636   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1737:1: note: ‘sqascii_OpenSSI’ was previously declared here
2023-10-22T14:42:03,636    sqascii_OpenSSI(ESL_SQFILE *sqfp, const char *ssifile_hint)
2023-10-22T14:42:03,636    ^
2023-10-22T14:42:03,637   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1737:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,637   pyhmmer/reexports/esl_sqio_ascii.h:27:7: warning: type of ‘sqascii_ReadBlock’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,637    int   sqascii_ReadBlock      (ESL_SQFILE *sqfp, ESL_SQ_BLOCK *sqBlock, int max_residues, int max_sequences, int max_init_window, int long_target);
2023-10-22T14:42:03,638          ^
2023-10-22T14:42:03,638   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1456:1: note: ‘sqascii_ReadBlock’ was previously declared here
2023-10-22T14:42:03,638    sqascii_ReadBlock(ESL_SQFILE *sqfp, ESL_SQ_BLOCK *sqBlock, int max_residues, int max_sequences, int max_init_window, int long_target)
2023-10-22T14:42:03,639    ^
2023-10-22T14:42:03,639   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1456:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,640   pyhmmer/reexports/esl_sqio_ascii.h:28:7: warning: type of ‘sqascii_Echo’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,640    int   sqascii_Echo           (ESL_SQFILE *sqfp, const ESL_SQ *sq, FILE *ofp);
2023-10-22T14:42:03,640          ^
2023-10-22T14:42:03,640   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1639:1: note: ‘sqascii_Echo’ was previously declared here
2023-10-22T14:42:03,641    sqascii_Echo(ESL_SQFILE *sqfp, const ESL_SQ *sq, FILE *ofp)
2023-10-22T14:42:03,641    ^
2023-10-22T14:42:03,641   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1639:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,642   pyhmmer/reexports/esl_sqio_ascii.h:26:7: warning: type of ‘sqascii_ReadWindow’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,642    int   sqascii_ReadWindow     (ESL_SQFILE *sqfp, int C, int W, ESL_SQ *sq);
2023-10-22T14:42:03,642          ^
2023-10-22T14:42:03,643   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1115:1: note: ‘sqascii_ReadWindow’ was previously declared here
2023-10-22T14:42:03,643    sqascii_ReadWindow(ESL_SQFILE *sqfp, int C, int W, ESL_SQ *sq)
2023-10-22T14:42:03,643    ^
2023-10-22T14:42:03,643   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1115:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,644   pyhmmer/reexports/esl_sqio_ascii.h:25:7: warning: type of ‘sqascii_ReadSequence’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,644    int   sqascii_ReadSequence   (ESL_SQFILE *sqfp, ESL_SQ *sq);
2023-10-22T14:42:03,644          ^
2023-10-22T14:42:03,645   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:942:1: note: ‘sqascii_ReadSequence’ was previously declared here
2023-10-22T14:42:03,645    sqascii_ReadSequence(ESL_SQFILE *sqfp, ESL_SQ *sq)
2023-10-22T14:42:03,645    ^
2023-10-22T14:42:03,646   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:942:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,646   pyhmmer/reexports/esl_sqio_ascii.h:24:7: warning: type of ‘sqascii_ReadInfo’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,646    int   sqascii_ReadInfo       (ESL_SQFILE *sqfp, ESL_SQ *sq);
2023-10-22T14:42:03,647          ^
2023-10-22T14:42:03,647   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:838:1: note: ‘sqascii_ReadInfo’ was previously declared here
2023-10-22T14:42:03,647    sqascii_ReadInfo(ESL_SQFILE *sqfp, ESL_SQ *sq)
2023-10-22T14:42:03,648    ^
2023-10-22T14:42:03,648   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:838:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,648   pyhmmer/reexports/esl_sqio_ascii.h:23:7: warning: type of ‘sqascii_Read’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,648    int   sqascii_Read           (ESL_SQFILE *sqfp, ESL_SQ *sq);
2023-10-22T14:42:03,649          ^
2023-10-22T14:42:03,649   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:743:1: note: ‘sqascii_Read’ was previously declared here
2023-10-22T14:42:03,649    sqascii_Read(ESL_SQFILE *sqfp, ESL_SQ *sq)
2023-10-22T14:42:03,650    ^
2023-10-22T14:42:03,650   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:743:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,650   pyhmmer/reexports/esl_sqio_ascii.h:30:7: warning: type of ‘sqascii_IsRewindable’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,651    int   sqascii_IsRewindable   (const ESL_SQFILE *sqfp);
2023-10-22T14:42:03,651          ^
2023-10-22T14:42:03,651   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:697:1: note: ‘sqascii_IsRewindable’ was previously declared here
2023-10-22T14:42:03,652    sqascii_IsRewindable(const ESL_SQFILE *sqfp)
2023-10-22T14:42:03,652    ^
2023-10-22T14:42:03,652   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:697:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,652   pyhmmer/reexports/esl_sqio_ascii.h:22:7: warning: type of ‘sqascii_GuessAlphabet’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,653    int   sqascii_GuessAlphabet  (ESL_SQFILE *sqfp, int *ret_type);
2023-10-22T14:42:03,653          ^
2023-10-22T14:42:03,653   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:646:1: note: ‘sqascii_GuessAlphabet’ was previously declared here
2023-10-22T14:42:03,654    sqascii_GuessAlphabet(ESL_SQFILE *sqfp, int *ret_type)
2023-10-22T14:42:03,654    ^
2023-10-22T14:42:03,654   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:646:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,655   pyhmmer/reexports/esl_sqio_ascii.h:21:7: warning: type of ‘sqascii_SetDigital’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,655    int   sqascii_SetDigital     (ESL_SQFILE *sqfp, const ESL_ALPHABET *abc);
2023-10-22T14:42:03,655          ^
2023-10-22T14:42:03,656   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:591:1: note: ‘sqascii_SetDigital’ was previously declared here
2023-10-22T14:42:03,656    sqascii_SetDigital(ESL_SQFILE *sqfp, const ESL_ALPHABET *abc)
2023-10-22T14:42:03,656    ^
2023-10-22T14:42:03,657   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:591:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,657   pyhmmer/reexports/esl_sqio_ascii.h:20:7: warning: type of ‘sqascii_Close’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,657    void  sqascii_Close          (ESL_SQFILE *sqfp);
2023-10-22T14:42:03,658          ^
2023-10-22T14:42:03,658   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:531:1: note: ‘sqascii_Close’ was previously declared here
2023-10-22T14:42:03,658    sqascii_Close(ESL_SQFILE *sqfp)
2023-10-22T14:42:03,659    ^
2023-10-22T14:42:03,659   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:531:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,659   pyhmmer/reexports/esl_sqio_ascii.h:19:7: warning: type of ‘sqascii_Position’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T14:42:03,660    int   sqascii_Position       (ESL_SQFILE *sqfp, off_t offset);
2023-10-22T14:42:03,660          ^
2023-10-22T14:42:03,660   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:475:1: note: type mismatch in parameter 2
2023-10-22T14:42:03,661    sqascii_Position(ESL_SQFILE *sqfp, off_t offset)
2023-10-22T14:42:03,661    ^
2023-10-22T14:42:03,662   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:475:1: note: ‘sqascii_Position’ was previously declared here
2023-10-22T14:42:03,662   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:475:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T14:42:03,662   building 'pyhmmer.plan7' extension
2023-10-22T14:42:03,663   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -DHAS_PYINTERPRETERSTATE_GETID=1 -DeslENABLE_NEON=1 -DCYTHON_WITHOUT_ASSERTIONS=1 -Ibuild/temp.linux-armv7l-cpython-37 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ivendor/easel -I/usr/include/python3.7m -c pyhmmer/plan7.c -o build/temp.linux-armv7l-cpython-37/pyhmmer/plan7.o -mfpu=neon -Wno-unused-variable
2023-10-22T14:42:05,081   In file included from pyhmmer/plan7.c:1235:
2023-10-22T14:42:05,082   pyhmmer/fileobj/linux.h: In function ‘fileobj_linux_read’:
2023-10-22T14:42:05,082   pyhmmer/fileobj/linux.h:48:13: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:42:05,083        if (len > size) {
2023-10-22T14:42:05,083                ^
2023-10-22T14:42:11,417   pyhmmer/plan7.c: In function ‘__pyx_f_7pyhmmer_5plan7_21OptimizedProfileBlock__allocate’:
2023-10-22T14:42:11,431   pyhmmer/plan7.c:61465:66: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:42:11,432        for (__pyx_t_10 = __pyx_v_self->_block->listSize; __pyx_t_10 < __pyx_t_9; __pyx_t_10+=1) {
2023-10-22T14:42:11,432                                                                     ^
2023-10-22T14:42:12,803   pyhmmer/plan7.c: In function ‘__pyx_fuse_1__pyx_f_7pyhmmer_5plan7_8Pipeline_search_hmm’:
2023-10-22T14:42:12,819   pyhmmer/plan7.c:70883:27: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T14:42:12,820      __pyx_t_6 = (__pyx_t_10 > __pyx_v_7pyhmmer_5plan7_HMMER_TARGET_LIMIT);
2023-10-22T14:42:12,820                              ^
2023-10-22T14:53:32,600   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro build/temp.linux-armv7l-cpython-37/pyhmmer/plan7.o build/temp.linux-armv7l-cpython-37/libhmmer.a build/temp.linux-armv7l-cpython-37/libeasel.a build/temp.linux-armv7l-cpython-37/libdivsufsort.a -Lbuild/temp.linux-armv7l-cpython-37 -L/usr/lib -Lbuild/temp.linux-armv7l-cpython-37 -lhmmer -leasel -ldivsufsort -ldivsufsort -leasel -lhmmer -o build/lib.linux-armv7l-cpython-37/pyhmmer/plan7.cpython-37m-arm-linux-gnueabihf.so -mfpu=neon
2023-10-22T15:06:31,516   vendor/hmmer/src/hmmer.h:1590:16: warning: type of ‘p7_hmm_Compare’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,517    extern int     p7_hmm_Compare(P7_HMM *h1, P7_HMM *h2, float tol);
2023-10-22T15:06:31,518                   ^
2023-10-22T15:06:31,518   vendor/hmmer/src/p7_hmm.c:1184:1: note: ‘p7_hmm_Compare’ was previously declared here
2023-10-22T15:06:31,518    p7_hmm_Compare(P7_HMM *h1, P7_HMM *h2, float tol)
2023-10-22T15:06:31,519    ^
2023-10-22T15:06:31,519   vendor/hmmer/src/p7_hmm.c:1184:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,519   vendor/hmmer/src/hmmer.h:1572:16: warning: type of ‘p7_hmm_SetName’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,520    extern int     p7_hmm_SetName       (P7_HMM *hmm, char *name);
2023-10-22T15:06:31,520                   ^
2023-10-22T15:06:31,520   vendor/hmmer/src/p7_hmm.c:404:1: note: ‘p7_hmm_SetName’ was previously declared here
2023-10-22T15:06:31,520    p7_hmm_SetName(P7_HMM *hmm, char *name)
2023-10-22T15:06:31,521    ^
2023-10-22T15:06:31,521   vendor/hmmer/src/p7_hmm.c:404:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,521   vendor/hmmer/src/hmmer.h:1573:16: warning: type of ‘p7_hmm_SetAccession’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,522    extern int     p7_hmm_SetAccession  (P7_HMM *hmm, char *acc);
2023-10-22T15:06:31,522                   ^
2023-10-22T15:06:31,522   vendor/hmmer/src/p7_hmm.c:441:1: note: ‘p7_hmm_SetAccession’ was previously declared here
2023-10-22T15:06:31,523    p7_hmm_SetAccession(P7_HMM *hmm, char *acc)
2023-10-22T15:06:31,523    ^
2023-10-22T15:06:31,523   vendor/hmmer/src/p7_hmm.c:441:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,523   vendor/hmmer/src/hmmer.h:1574:16: warning: type of ‘p7_hmm_SetDescription’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,524    extern int     p7_hmm_SetDescription(P7_HMM *hmm, char *desc);
2023-10-22T15:06:31,524                   ^
2023-10-22T15:06:31,524   vendor/hmmer/src/p7_hmm.c:471:1: note: ‘p7_hmm_SetDescription’ was previously declared here
2023-10-22T15:06:31,525    p7_hmm_SetDescription(P7_HMM *hmm, char *desc)
2023-10-22T15:06:31,525    ^
2023-10-22T15:06:31,525   vendor/hmmer/src/p7_hmm.c:471:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,525   vendor/hmmer/src/impl_neon/impl_neon.h:290:21: warning: type of ‘p7_oprofile_Compare’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,526    extern int          p7_oprofile_Compare(const P7_OPROFILE *om1, const P7_OPROFILE *om2, float tol, char *errmsg);
2023-10-22T15:06:31,526                        ^
2023-10-22T15:06:31,526   vendor/hmmer/src/impl_neon/p7_oprofile.c:1806:1: note: ‘p7_oprofile_Compare’ was previously declared here
2023-10-22T15:06:31,527    p7_oprofile_Compare(const P7_OPROFILE *om1, const P7_OPROFILE *om2, float tol, char *errmsg)
2023-10-22T15:06:31,527    ^
2023-10-22T15:06:31,527   vendor/hmmer/src/impl_neon/p7_oprofile.c:1806:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,527   vendor/hmmer/src/impl_neon/impl_neon.h:270:21: warning: type of ‘p7_oprofile_IsLocal’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,528    extern int          p7_oprofile_IsLocal(const P7_OPROFILE *om);
2023-10-22T15:06:31,528                        ^
2023-10-22T15:06:31,528   vendor/hmmer/src/impl_neon/p7_oprofile.c:161:1: note: ‘p7_oprofile_IsLocal’ was previously declared here
2023-10-22T15:06:31,529    p7_oprofile_IsLocal(const P7_OPROFILE *om)
2023-10-22T15:06:31,529    ^
2023-10-22T15:06:31,529   vendor/hmmer/src/impl_neon/p7_oprofile.c:161:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,529   vendor/hmmer/src/hmmer.h:1681:20: warning: type of ‘p7_profile_Compare’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,530    extern int         p7_profile_Compare(P7_PROFILE *gm1, P7_PROFILE *gm2, float tol);
2023-10-22T15:06:31,530                       ^
2023-10-22T15:06:31,530   vendor/hmmer/src/p7_profile.c:552:1: note: ‘p7_profile_Compare’ was previously declared here
2023-10-22T15:06:31,531    p7_profile_Compare(P7_PROFILE *gm1, P7_PROFILE *gm2, float tol)
2023-10-22T15:06:31,531    ^
2023-10-22T15:06:31,531   vendor/hmmer/src/p7_profile.c:552:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,532   vendor/hmmer/src/hmmer.h:1426:12: warning: type of ‘p7_ReconfigLength’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,532    extern int p7_ReconfigLength  (P7_PROFILE *gm, int L);
2023-10-22T15:06:31,532               ^
2023-10-22T15:06:31,532   vendor/hmmer/src/modelconfig.c:221:1: note: ‘p7_ReconfigLength’ was previously declared here
2023-10-22T15:06:31,533    p7_ReconfigLength(P7_PROFILE *gm, int L)
2023-10-22T15:06:31,533    ^
2023-10-22T15:06:31,533   vendor/hmmer/src/modelconfig.c:221:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,534   vendor/hmmer/src/hmmer.h:1676:20: warning: type of ‘p7_profile_IsLocal’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,534    extern int         p7_profile_IsLocal(const P7_PROFILE *gm);
2023-10-22T15:06:31,534                       ^
2023-10-22T15:06:31,534   vendor/hmmer/src/p7_profile.c:335:1: note: ‘p7_profile_IsLocal’ was previously declared here
2023-10-22T15:06:31,535    p7_profile_IsLocal(const P7_PROFILE *gm)
2023-10-22T15:06:31,535    ^
2023-10-22T15:06:31,535   vendor/hmmer/src/p7_profile.c:335:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,536   vendor/hmmer/src/hmmer.h:1677:20: warning: type of ‘p7_profile_IsMultihit’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,536    extern int         p7_profile_IsMultihit(const P7_PROFILE *gm);
2023-10-22T15:06:31,536                       ^
2023-10-22T15:06:31,536   vendor/hmmer/src/p7_profile.c:347:1: note: ‘p7_profile_IsMultihit’ was previously declared here
2023-10-22T15:06:31,537    p7_profile_IsMultihit(const P7_PROFILE *gm)
2023-10-22T15:06:31,537    ^
2023-10-22T15:06:31,537   vendor/hmmer/src/p7_profile.c:347:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,538   vendor/hmmer/src/hmmer.h:1587:16: warning: type of ‘p7_hmm_SampleEnumerable’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,538    extern int     p7_hmm_SampleEnumerable(ESL_RANDOMNESS *r, int M, const ESL_ALPHABET *abc, P7_HMM **ret_hmm);
2023-10-22T15:06:31,538                   ^
2023-10-22T15:06:31,538   vendor/hmmer/src/p7_hmm.c:1051:1: note: ‘p7_hmm_SampleEnumerable’ was previously declared here
2023-10-22T15:06:31,539    p7_hmm_SampleEnumerable(ESL_RANDOMNESS *r, int M, const ESL_ALPHABET *abc, P7_HMM **ret_hmm)
2023-10-22T15:06:31,539    ^
2023-10-22T15:06:31,539   vendor/hmmer/src/p7_hmm.c:1051:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,540   vendor/hmmer/src/hmmer.h:1586:16: warning: type of ‘p7_hmm_SampleUngapped’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,540    extern int     p7_hmm_SampleUngapped  (ESL_RANDOMNESS *r, int M, const ESL_ALPHABET *abc, P7_HMM **ret_hmm);
2023-10-22T15:06:31,540                   ^
2023-10-22T15:06:31,541   vendor/hmmer/src/p7_hmm.c:1004:1: note: ‘p7_hmm_SampleUngapped’ was previously declared here
2023-10-22T15:06:31,541    p7_hmm_SampleUngapped(ESL_RANDOMNESS *r, int M, const ESL_ALPHABET *abc, P7_HMM **ret_hmm)
2023-10-22T15:06:31,541    ^
2023-10-22T15:06:31,541   vendor/hmmer/src/p7_hmm.c:1004:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,542   vendor/hmmer/src/hmmer.h:1585:16: warning: type of ‘p7_hmm_Sample’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,542    extern int     p7_hmm_Sample          (ESL_RANDOMNESS *r, int M, const ESL_ALPHABET *abc, P7_HMM **ret_hmm);
2023-10-22T15:06:31,542                   ^
2023-10-22T15:06:31,543   vendor/hmmer/src/p7_hmm.c:944:1: note: ‘p7_hmm_Sample’ was previously declared here
2023-10-22T15:06:31,543    p7_hmm_Sample(ESL_RANDOMNESS *r, int M, const ESL_ALPHABET *abc, P7_HMM **ret_hmm)
2023-10-22T15:06:31,543    ^
2023-10-22T15:06:31,543   vendor/hmmer/src/p7_hmm.c:944:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,544   vendor/hmmer/src/impl_neon/impl_neon.h:272:21: warning: type of ‘p7_oprofile_Sizeof’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,544    extern size_t       p7_oprofile_Sizeof(P7_OPROFILE *om);
2023-10-22T15:06:31,544                        ^
2023-10-22T15:06:31,545   vendor/hmmer/src/impl_neon/p7_oprofile.c:208:1: note: ‘p7_oprofile_Sizeof’ was previously declared here
2023-10-22T15:06:31,545    p7_oprofile_Sizeof(P7_OPROFILE *om)
2023-10-22T15:06:31,545    ^
2023-10-22T15:06:31,545   vendor/hmmer/src/impl_neon/p7_oprofile.c:208:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,546   vendor/hmmer/src/hmmer.h:1674:20: warning: type of ‘p7_profile_Sizeof’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,546    extern size_t      p7_profile_Sizeof(P7_PROFILE *gm);
2023-10-22T15:06:31,546                       ^
2023-10-22T15:06:31,547   vendor/hmmer/src/p7_profile.c:277:1: note: ‘p7_profile_Sizeof’ was previously declared here
2023-10-22T15:06:31,547    p7_profile_Sizeof(P7_PROFILE *gm)
2023-10-22T15:06:31,547    ^
2023-10-22T15:06:31,547   vendor/hmmer/src/p7_profile.c:277:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,548   vendor/hmmer/src/hmmer.h:1565:16: warning: type of ‘p7_hmm_Destroy’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,548    extern void    p7_hmm_Destroy(P7_HMM *hmm);
2023-10-22T15:06:31,548                   ^
2023-10-22T15:06:31,549   vendor/hmmer/src/p7_hmm.c:191:1: note: ‘p7_hmm_Destroy’ was previously declared here
2023-10-22T15:06:31,549    p7_hmm_Destroy(P7_HMM *hmm)
2023-10-22T15:06:31,549    ^
2023-10-22T15:06:31,549   vendor/hmmer/src/p7_hmm.c:191:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,550   vendor/hmmer/src/hmmer.h:1671:20: warning: type of ‘p7_profile_Copy’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,550    extern int         p7_profile_Copy(const P7_PROFILE *src, P7_PROFILE *dst);
2023-10-22T15:06:31,550                       ^
2023-10-22T15:06:31,551   vendor/hmmer/src/p7_profile.c:146:1: note: ‘p7_profile_Copy’ was previously declared here
2023-10-22T15:06:31,551    p7_profile_Copy(const P7_PROFILE *src, P7_PROFILE *dst)
2023-10-22T15:06:31,551    ^
2023-10-22T15:06:31,551   vendor/hmmer/src/p7_profile.c:146:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,552   vendor/hmmer/src/hmmer.h:1620:24: warning: type of ‘p7_hmm_ScoreDataCreate’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,552    extern P7_SCOREDATA   *p7_hmm_ScoreDataCreate(P7_OPROFILE *om, P7_PROFILE *gm );
2023-10-22T15:06:31,552                           ^
2023-10-22T15:06:31,553   vendor/hmmer/src/p7_scoredata.c:175:1: note: ‘p7_hmm_ScoreDataCreate’ was previously declared here
2023-10-22T15:06:31,553    p7_hmm_ScoreDataCreate(P7_OPROFILE *om, P7_PROFILE *gm )
2023-10-22T15:06:31,553    ^
2023-10-22T15:06:31,553   vendor/hmmer/src/p7_scoredata.c:175:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,554   vendor/hmmer/src/impl_neon/impl_neon.h:310:12: warning: type of ‘p7_oprofile_Write’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,554    extern int p7_oprofile_Write(FILE *ffp, FILE *pfp, P7_OPROFILE *om);
2023-10-22T15:06:31,554               ^
2023-10-22T15:06:31,555   vendor/hmmer/src/impl_neon/io.c:86:1: note: ‘p7_oprofile_Write’ was previously declared here
2023-10-22T15:06:31,555    p7_oprofile_Write(FILE *ffp, FILE *pfp, P7_OPROFILE *om)
2023-10-22T15:06:31,555    ^
2023-10-22T15:06:31,555   vendor/hmmer/src/impl_neon/io.c:86:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,556   vendor/hmmer/src/impl_neon/impl_neon.h:273:21: warning: type of ‘p7_oprofile_Copy’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,556    extern P7_OPROFILE *p7_oprofile_Copy(P7_OPROFILE *om);
2023-10-22T15:06:31,556                        ^
2023-10-22T15:06:31,557   vendor/hmmer/src/impl_neon/p7_oprofile.c:255:1: note: ‘p7_oprofile_Copy’ was previously declared here
2023-10-22T15:06:31,557    p7_oprofile_Copy(P7_OPROFILE *om1)
2023-10-22T15:06:31,557    ^
2023-10-22T15:06:31,558   vendor/hmmer/src/impl_neon/p7_oprofile.c:255:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,558   vendor/hmmer/src/hmmer.h:1608:13: warning: type of ‘p7_hmmfile_Read’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,558    extern int  p7_hmmfile_Read(P7_HMMFILE *hfp, ESL_ALPHABET **ret_abc,  P7_HMM **opt_hmm);
2023-10-22T15:06:31,558                ^
2023-10-22T15:06:31,559   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1131:1: note: ‘p7_hmmfile_Read’ was previously declared here
2023-10-22T15:06:31,559    p7_hmmfile_Read(P7_HMMFILE *hfp, ESL_ALPHABET **ret_abc,  P7_HMM **opt_hmm)
2023-10-22T15:06:31,559    ^
2023-10-22T15:06:31,559   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1131:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,560   vendor/hmmer/src/hmmer.h:1605:13: warning: type of ‘p7_hmmfile_WriteBinary’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,560    extern int  p7_hmmfile_WriteBinary(FILE *fp, int format, P7_HMM *hmm);
2023-10-22T15:06:31,560                ^
2023-10-22T15:06:31,561   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:981:1: note: ‘p7_hmmfile_WriteBinary’ was previously declared here
2023-10-22T15:06:31,561    p7_hmmfile_WriteBinary(FILE *fp, int format, P7_HMM *hmm)
2023-10-22T15:06:31,561    ^
2023-10-22T15:06:31,561   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:981:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,562   vendor/hmmer/src/hmmer.h:1606:13: warning: type of ‘p7_hmmfile_WriteASCII’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,562    extern int  p7_hmmfile_WriteASCII (FILE *fp, int format, P7_HMM *hmm);
2023-10-22T15:06:31,562                ^
2023-10-22T15:06:31,562   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:513:1: note: ‘p7_hmmfile_WriteASCII’ was previously declared here
2023-10-22T15:06:31,563    p7_hmmfile_WriteASCII(FILE *fp, int format, P7_HMM *hmm)
2023-10-22T15:06:31,563    ^
2023-10-22T15:06:31,563   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:513:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,564   vendor/hmmer/src/hmmer.h:1567:16: warning: type of ‘p7_hmm_Clone’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,564    extern P7_HMM *p7_hmm_Clone(const P7_HMM *hmm);
2023-10-22T15:06:31,564                   ^
2023-10-22T15:06:31,564   vendor/hmmer/src/p7_hmm.c:259:1: note: ‘p7_hmm_Clone’ was previously declared here
2023-10-22T15:06:31,565    p7_hmm_Clone(const P7_HMM *hmm)
2023-10-22T15:06:31,565    ^
2023-10-22T15:06:31,565   vendor/hmmer/src/p7_hmm.c:259:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,565   vendor/hmmer/src/hmmer.h:1514:12: warning: type of ‘p7_Builder’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,566    extern int p7_Builder      (P7_BUILDER *bld, ESL_MSA *msa, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE ***opt_trarr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om, ESL_MSA **opt_postmsa);
2023-10-22T15:06:31,566               ^
2023-10-22T15:06:31,567   vendor/hmmer/src/p7_builder.c:415:1: note: ‘p7_Builder’ was previously declared here
2023-10-22T15:06:31,567    p7_Builder(P7_BUILDER *bld, ESL_MSA *msa, P7_BG *bg,
2023-10-22T15:06:31,567    ^
2023-10-22T15:06:31,567   vendor/hmmer/src/p7_builder.c:415:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,568   vendor/hmmer/src/hmmer.h:1515:12: warning: type of ‘p7_SingleBuilder’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,568    extern int p7_SingleBuilder(P7_BUILDER *bld, ESL_SQ *sq,   P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE  **opt_tr,    P7_PROFILE **opt_gm, P7_OPROFILE **opt_om);
2023-10-22T15:06:31,568               ^
2023-10-22T15:06:31,569   vendor/hmmer/src/p7_builder.c:496:1: note: ‘p7_SingleBuilder’ was previously declared here
2023-10-22T15:06:31,569    p7_SingleBuilder(P7_BUILDER *bld, ESL_SQ *sq, P7_BG *bg, P7_HMM **opt_hmm,
2023-10-22T15:06:31,569    ^
2023-10-22T15:06:31,569   vendor/hmmer/src/p7_builder.c:496:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,570   vendor/hmmer/src/hmmer.h:1568:16: warning: type of ‘p7_hmm_Zero’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,570    extern int     p7_hmm_Zero(P7_HMM *hmm);
2023-10-22T15:06:31,570                   ^
2023-10-22T15:06:31,570   vendor/hmmer/src/p7_hmm.c:313:1: note: ‘p7_hmm_Zero’ was previously declared here
2023-10-22T15:06:31,571    p7_hmm_Zero(P7_HMM *hmm)
2023-10-22T15:06:31,571    ^
2023-10-22T15:06:31,571   vendor/hmmer/src/p7_hmm.c:313:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,572   vendor/hmmer/src/hmmer.h:1591:16: warning: type of ‘p7_hmm_Validate’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,572    extern int     p7_hmm_Validate(P7_HMM *hmm, char *errbuf, float tol);
2023-10-22T15:06:31,572                   ^
2023-10-22T15:06:31,572   vendor/hmmer/src/p7_hmm.c:1253:1: note: ‘p7_hmm_Validate’ was previously declared here
2023-10-22T15:06:31,573    p7_hmm_Validate(P7_HMM *hmm, char *errbuf, float tol)
2023-10-22T15:06:31,573    ^
2023-10-22T15:06:31,573   vendor/hmmer/src/p7_hmm.c:1253:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,574   vendor/hmmer/src/hmmer.h:1728:12: warning: type of ‘p7_tophits_Alignment’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,574    extern int p7_tophits_Alignment(const P7_TOPHITS *th, const ESL_ALPHABET *abc,
2023-10-22T15:06:31,574               ^
2023-10-22T15:06:31,575   vendor/hmmer/src/p7_tophits.c:1509:1: note: ‘p7_tophits_Alignment’ was previously declared here
2023-10-22T15:06:31,575    p7_tophits_Alignment(const P7_TOPHITS *th, const ESL_ALPHABET *abc,
2023-10-22T15:06:31,575    ^
2023-10-22T15:06:31,575   vendor/hmmer/src/p7_tophits.c:1509:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,576   vendor/hmmer/src/hmmer.h:1581:16: warning: type of ‘p7_hmm_ScaleExponential’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,576    extern int     p7_hmm_ScaleExponential(P7_HMM *hmm, double exp);
2023-10-22T15:06:31,576                   ^
2023-10-22T15:06:31,577   vendor/hmmer/src/p7_hmm.c:821:1: note: ‘p7_hmm_ScaleExponential’ was previously declared here
2023-10-22T15:06:31,577    p7_hmm_ScaleExponential(P7_HMM *hmm, double exp)
2023-10-22T15:06:31,577    ^
2023-10-22T15:06:31,577   vendor/hmmer/src/p7_hmm.c:821:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,578   vendor/hmmer/src/hmmer.h:1580:16: warning: type of ‘p7_hmm_Scale’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,578    extern int     p7_hmm_Scale      (P7_HMM *hmm, double scale);
2023-10-22T15:06:31,578                   ^
2023-10-22T15:06:31,579   vendor/hmmer/src/p7_hmm.c:757:1: note: ‘p7_hmm_Scale’ was previously declared here
2023-10-22T15:06:31,579    p7_hmm_Scale(P7_HMM *hmm, double scale)
2023-10-22T15:06:31,579    ^
2023-10-22T15:06:31,579   vendor/hmmer/src/p7_hmm.c:757:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,580   vendor/hmmer/src/hmmer.h:1578:16: warning: type of ‘p7_hmm_SetConsensus’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,580    extern int     p7_hmm_SetConsensus  (P7_HMM *hmm, ESL_SQ *sq);
2023-10-22T15:06:31,580                   ^
2023-10-22T15:06:31,581   vendor/hmmer/src/p7_hmm.c:702:1: note: ‘p7_hmm_SetConsensus’ was previously declared here
2023-10-22T15:06:31,581    p7_hmm_SetConsensus(P7_HMM *hmm, ESL_SQ *sq)
2023-10-22T15:06:31,581    ^
2023-10-22T15:06:31,581   vendor/hmmer/src/p7_hmm.c:702:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,582   vendor/hmmer/src/hmmer.h:1562:16: warning: type of ‘p7_hmm_Create’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,582    extern P7_HMM *p7_hmm_Create(int M, const ESL_ALPHABET *abc);
2023-10-22T15:06:31,582                   ^
2023-10-22T15:06:31,583   vendor/hmmer/src/p7_hmm.c:50:1: note: ‘p7_hmm_Create’ was previously declared here
2023-10-22T15:06:31,583    p7_hmm_Create(int M, const ESL_ALPHABET *abc)
2023-10-22T15:06:31,583    ^
2023-10-22T15:06:31,583   vendor/hmmer/src/p7_hmm.c:50:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,584   vendor/hmmer/src/hmmer.h:1675:20: warning: type of ‘p7_profile_Destroy’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,584    extern void        p7_profile_Destroy(P7_PROFILE *gm);
2023-10-22T15:06:31,584                       ^
2023-10-22T15:06:31,584   vendor/hmmer/src/p7_profile.c:306:1: note: ‘p7_profile_Destroy’ was previously declared here
2023-10-22T15:06:31,585    p7_profile_Destroy(P7_PROFILE *gm)
2023-10-22T15:06:31,585    ^
2023-10-22T15:06:31,585   vendor/hmmer/src/p7_profile.c:306:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,586   vendor/hmmer/src/hmmer.h:1669:20: warning: type of ‘p7_profile_Create’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,586    extern P7_PROFILE *p7_profile_Create(int M, const ESL_ALPHABET *abc);
2023-10-22T15:06:31,586                       ^
2023-10-22T15:06:31,586   vendor/hmmer/src/p7_profile.c:52:1: note: ‘p7_profile_Create’ was previously declared here
2023-10-22T15:06:31,587    p7_profile_Create(int allocM, const ESL_ALPHABET *abc)
2023-10-22T15:06:31,587    ^
2023-10-22T15:06:31,587   vendor/hmmer/src/p7_profile.c:52:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,588   vendor/hmmer/src/impl_neon/impl_neon.h:269:21: warning: type of ‘p7_oprofile_Create’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,588    extern P7_OPROFILE *p7_oprofile_Create(int M, const ESL_ALPHABET *abc);
2023-10-22T15:06:31,588                        ^
2023-10-22T15:06:31,588   vendor/hmmer/src/impl_neon/p7_oprofile.c:48:1: note: ‘p7_oprofile_Create’ was previously declared here
2023-10-22T15:06:31,589    p7_oprofile_Create(int allocM, const ESL_ALPHABET *abc)
2023-10-22T15:06:31,589    ^
2023-10-22T15:06:31,589   vendor/hmmer/src/impl_neon/p7_oprofile.c:48:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,589   vendor/hmmer/src/hmmer.h:1425:12: warning: type of ‘p7_ProfileConfig’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,590    extern int p7_ProfileConfig(const P7_HMM *hmm, const P7_BG *bg, P7_PROFILE *gm, int L, int mode);
2023-10-22T15:06:31,590               ^
2023-10-22T15:06:31,590   vendor/hmmer/src/modelconfig.c:48:1: note: ‘p7_ProfileConfig’ was previously declared here
2023-10-22T15:06:31,591    p7_ProfileConfig(const P7_HMM *hmm, const P7_BG *bg, P7_PROFILE *gm, int L, int mode)
2023-10-22T15:06:31,591    ^
2023-10-22T15:06:31,591   vendor/hmmer/src/modelconfig.c:48:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,591   vendor/hmmer/src/hmmer.h:1465:12: warning: type of ‘p7_tracealign_Seqs’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,592    extern int p7_tracealign_Seqs(ESL_SQ **sq,           P7_TRACE **tr, int nseq, int M,  int optflags, P7_HMM *hmm, ESL_MSA **ret_msa);
2023-10-22T15:06:31,592               ^
2023-10-22T15:06:31,592   vendor/hmmer/src/tracealign.c:97:1: note: ‘p7_tracealign_Seqs’ was previously declared here
2023-10-22T15:06:31,593    p7_tracealign_Seqs(ESL_SQ **sq, P7_TRACE **tr, int nseq, int M, int optflags, P7_HMM *hmm, ESL_MSA **ret_msa)
2023-10-22T15:06:31,593    ^
2023-10-22T15:06:31,593   vendor/hmmer/src/tracealign.c:97:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,593   vendor/hmmer/src/hmmer.h:1593:16: warning: type of ‘p7_hmm_CalculateOccupancy’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,594    extern int     p7_hmm_CalculateOccupancy(const P7_HMM *hmm, float *mocc, float *iocc);
2023-10-22T15:06:31,594                   ^
2023-10-22T15:06:31,594   vendor/hmmer/src/p7_hmm.c:1338:1: note: ‘p7_hmm_CalculateOccupancy’ was previously declared here
2023-10-22T15:06:31,595    p7_hmm_CalculateOccupancy(const P7_HMM *hmm, float *mocc, float *iocc)
2023-10-22T15:06:31,595    ^
2023-10-22T15:06:31,595   vendor/hmmer/src/p7_hmm.c:1338:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,595   vendor/hmmer/src/hmmer.h:1582:16: warning: type of ‘p7_hmm_Renormalize’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,596    extern int     p7_hmm_Renormalize(P7_HMM *hmm);
2023-10-22T15:06:31,596                   ^
2023-10-22T15:06:31,596   vendor/hmmer/src/p7_hmm.c:856:1: note: ‘p7_hmm_Renormalize’ was previously declared here
2023-10-22T15:06:31,597    p7_hmm_Renormalize(P7_HMM *hmm)
2023-10-22T15:06:31,597    ^
2023-10-22T15:06:31,597   vendor/hmmer/src/p7_hmm.c:856:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,597   vendor/hmmer/src/hmmer.h:1577:16: warning: type of ‘p7_hmm_SetComposition’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,598    extern int     p7_hmm_SetComposition(P7_HMM *hmm);
2023-10-22T15:06:31,598                   ^
2023-10-22T15:06:31,598   vendor/hmmer/src/p7_hmm.c:625:1: note: ‘p7_hmm_SetComposition’ was previously declared here
2023-10-22T15:06:31,598    p7_hmm_SetComposition(P7_HMM *hmm)
2023-10-22T15:06:31,599    ^
2023-10-22T15:06:31,599   vendor/hmmer/src/p7_hmm.c:625:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,599   vendor/hmmer/src/hmmer.h:1610:13: warning: type of ‘p7_hmmfile_Position’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,600    extern int  p7_hmmfile_Position(P7_HMMFILE *hfp, const off_t offset);
2023-10-22T15:06:31,600                ^
2023-10-22T15:06:31,600   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1191:1: note: type mismatch in parameter 2
2023-10-22T15:06:31,600    p7_hmmfile_Position(P7_HMMFILE *hfp, const off_t offset)
2023-10-22T15:06:31,601    ^
2023-10-22T15:06:31,601   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1191:1: note: ‘p7_hmmfile_Position’ was previously declared here
2023-10-22T15:06:31,601   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1191:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,601   vendor/hmmer/src/impl_neon/impl_neon.h:280:21: warning: type of ‘p7_oprofile_Convert’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,602    extern int          p7_oprofile_Convert(const P7_PROFILE *gm, P7_OPROFILE *om);
2023-10-22T15:06:31,602                        ^
2023-10-22T15:06:31,602   vendor/hmmer/src/impl_neon/p7_oprofile.c:1020:2: note: ‘p7_oprofile_Convert’ was previously declared here
2023-10-22T15:06:31,603     p7_oprofile_Convert(const P7_PROFILE *gm, P7_OPROFILE *om)
2023-10-22T15:06:31,603     ^
2023-10-22T15:06:31,603   vendor/hmmer/src/impl_neon/p7_oprofile.c:1020:2: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,604   vendor/easel/esl_sqio.h:131:14: warning: type of ‘esl_sqio_Read’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,604    extern int   esl_sqio_Read        (ESL_SQFILE *sqfp, ESL_SQ *sq);
2023-10-22T15:06:31,604                 ^
2023-10-22T15:06:31,604   vendor/easel/esl_sqio.c:356:1: note: ‘esl_sqio_Read’ was previously declared here
2023-10-22T15:06:31,605    esl_sqio_Read(ESL_SQFILE *sqfp, ESL_SQ *sq)
2023-10-22T15:06:31,605    ^
2023-10-22T15:06:31,605   vendor/easel/esl_sqio.c:356:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,606   vendor/hmmer/src/impl_neon/impl_neon.h:311:12: warning: type of ‘p7_oprofile_ReadMSV’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,606    extern int p7_oprofile_ReadMSV (P7_HMMFILE *hfp, ESL_ALPHABET **byp_abc, P7_OPROFILE **ret_om);
2023-10-22T15:06:31,606               ^
2023-10-22T15:06:31,606   vendor/hmmer/src/impl_neon/io.c:230:1: note: ‘p7_oprofile_ReadMSV’ was previously declared here
2023-10-22T15:06:31,607    p7_oprofile_ReadMSV(P7_HMMFILE *hfp, ESL_ALPHABET **byp_abc, P7_OPROFILE **ret_om)
2023-10-22T15:06:31,607    ^
2023-10-22T15:06:31,607   vendor/hmmer/src/impl_neon/io.c:230:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,608   vendor/hmmer/src/impl_neon/impl_neon.h:314:12: warning: type of ‘p7_oprofile_ReadRest’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,608    extern int p7_oprofile_ReadRest(P7_HMMFILE *hfp, P7_OPROFILE *om);
2023-10-22T15:06:31,608               ^
2023-10-22T15:06:31,608   vendor/hmmer/src/impl_neon/io.c:488:1: note: ‘p7_oprofile_ReadRest’ was previously declared here
2023-10-22T15:06:31,609    p7_oprofile_ReadRest(P7_HMMFILE *hfp, P7_OPROFILE *om)
2023-10-22T15:06:31,609    ^
2023-10-22T15:06:31,609   vendor/hmmer/src/impl_neon/io.c:488:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,610   vendor/hmmer/src/impl_neon/impl_neon.h:271:21: warning: type of ‘p7_oprofile_Destroy’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,610    extern void         p7_oprofile_Destroy(P7_OPROFILE *om);
2023-10-22T15:06:31,610                        ^
2023-10-22T15:06:31,610   vendor/hmmer/src/impl_neon/p7_oprofile.c:172:1: note: ‘p7_oprofile_Destroy’ was previously declared here
2023-10-22T15:06:31,611    p7_oprofile_Destroy(P7_OPROFILE *om)
2023-10-22T15:06:31,611    ^
2023-10-22T15:06:31,611   vendor/hmmer/src/impl_neon/p7_oprofile.c:172:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,611   vendor/hmmer/src/impl_neon/impl_neon.h:281:21: warning: type of ‘p7_oprofile_ReconfigLength’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,612    extern int          p7_oprofile_ReconfigLength    (P7_OPROFILE *om, int L);
2023-10-22T15:06:31,612                        ^
2023-10-22T15:06:31,612   vendor/hmmer/src/impl_neon/p7_oprofile.c:1077:1: note: ‘p7_oprofile_ReconfigLength’ was previously declared here
2023-10-22T15:06:31,613    p7_oprofile_ReconfigLength(P7_OPROFILE *om, int L)
2023-10-22T15:06:31,613    ^
2023-10-22T15:06:31,613   vendor/hmmer/src/impl_neon/p7_oprofile.c:1077:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,613   vendor/hmmer/src/hmmer.h:1648:12: warning: type of ‘p7_Pipeline’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,614    extern int p7_Pipeline              (P7_PIPELINE *pli, P7_OPROFILE *om, P7_BG *bg, const ESL_SQ *sq, const ESL_SQ *ntsq, P7_TOPHITS *th);
2023-10-22T15:06:31,614               ^
2023-10-22T15:06:31,614   vendor/hmmer/src/p7_pipeline.c:697:1: note: ‘p7_Pipeline’ was previously declared here
2023-10-22T15:06:31,615    p7_Pipeline(P7_PIPELINE *pli, P7_OPROFILE *om, P7_BG *bg, const ESL_SQ *sq, const ESL_SQ *ntsq, P7_TOPHITS *hitlist)
2023-10-22T15:06:31,615    ^
2023-10-22T15:06:31,615   vendor/hmmer/src/p7_pipeline.c:697:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,615   vendor/easel/esl_sq.h:161:16: warning: type of ‘esl_sq_Copy’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,616    extern int     esl_sq_Copy(const ESL_SQ *src, ESL_SQ *dst);
2023-10-22T15:06:31,616                   ^
2023-10-22T15:06:31,617   vendor/easel/esl_sq.c:265:1: note: ‘esl_sq_Copy’ was previously declared here
2023-10-22T15:06:31,618    esl_sq_Copy(const ESL_SQ *src, ESL_SQ *dst)
2023-10-22T15:06:31,618    ^
2023-10-22T15:06:31,619   vendor/easel/esl_sq.c:265:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,619   vendor/easel/esl_sqio.h:133:14: warning: type of ‘esl_sqio_ReadWindow’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,619    extern int   esl_sqio_ReadWindow  (ESL_SQFILE *sqfp, int C, int W, ESL_SQ *sq);
2023-10-22T15:06:31,620                 ^
2023-10-22T15:06:31,620   vendor/easel/esl_sqio.c:500:1: note: ‘esl_sqio_ReadWindow’ was previously declared here
2023-10-22T15:06:31,621    esl_sqio_ReadWindow(ESL_SQFILE *sqfp, int C, int W, ESL_SQ *sq)
2023-10-22T15:06:31,621    ^
2023-10-22T15:06:31,621   vendor/easel/esl_sqio.c:500:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,621   vendor/hmmer/src/hmmer.h:1645:12: warning: type of ‘p7_pli_NewModel’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,626    extern int p7_pli_NewModel          (P7_PIPELINE *pli, const P7_OPROFILE *om, P7_BG *bg);
2023-10-22T15:06:31,626               ^
2023-10-22T15:06:31,627   vendor/hmmer/src/p7_pipeline.c:492:1: note: ‘p7_pli_NewModel’ was previously declared here
2023-10-22T15:06:31,627    p7_pli_NewModel(P7_PIPELINE *pli, const P7_OPROFILE *om, P7_BG *bg)
2023-10-22T15:06:31,627    ^
2023-10-22T15:06:31,628   vendor/hmmer/src/p7_pipeline.c:492:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,628   vendor/easel/esl_sq.h:183:16: warning: type of ‘esl_sq_CreateDigital’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,628    extern ESL_SQ *esl_sq_CreateDigital(const ESL_ALPHABET *abc);
2023-10-22T15:06:31,628                   ^
2023-10-22T15:06:31,629   vendor/easel/esl_sq.c:730:1: note: ‘esl_sq_CreateDigital’ was previously declared here
2023-10-22T15:06:31,629    esl_sq_CreateDigital(const ESL_ALPHABET *abc)
2023-10-22T15:06:31,629    ^
2023-10-22T15:06:31,630   vendor/easel/esl_sq.c:730:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,630   vendor/easel/esl_sq.h:169:16: warning: type of ‘esl_sq_SetAccession’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,630    extern int     esl_sq_SetAccession   (ESL_SQ *sq, const char *acc);
2023-10-22T15:06:31,631                   ^
2023-10-22T15:06:31,631   vendor/easel/esl_sq.c:1087:1: note: ‘esl_sq_SetAccession’ was previously declared here
2023-10-22T15:06:31,631    esl_sq_SetAccession(ESL_SQ *sq, const char *acc)
2023-10-22T15:06:31,632    ^
2023-10-22T15:06:31,632   vendor/easel/esl_sq.c:1087:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,632   vendor/easel/esl_sq.h:168:16: warning: type of ‘esl_sq_SetName’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,632    extern int     esl_sq_SetName        (ESL_SQ *sq, const char *name);
2023-10-22T15:06:31,633                   ^
2023-10-22T15:06:31,633   vendor/easel/esl_sq.c:1049:1: note: ‘esl_sq_SetName’ was previously declared here
2023-10-22T15:06:31,633    esl_sq_SetName(ESL_SQ *sq, const char *name)
2023-10-22T15:06:31,634    ^
2023-10-22T15:06:31,634   vendor/easel/esl_sq.c:1049:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,634   vendor/easel/esl_sq.h:170:16: warning: type of ‘esl_sq_SetDesc’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,635    extern int     esl_sq_SetDesc        (ESL_SQ *sq, const char *desc);
2023-10-22T15:06:31,635                   ^
2023-10-22T15:06:31,635   vendor/easel/esl_sq.c:1127:1: note: ‘esl_sq_SetDesc’ was previously declared here
2023-10-22T15:06:31,636    esl_sq_SetDesc(ESL_SQ *sq, const char *desc)
2023-10-22T15:06:31,636    ^
2023-10-22T15:06:31,636   vendor/easel/esl_sq.c:1127:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,637   vendor/easel/esl_sq.h:171:16: warning: type of ‘esl_sq_SetSource’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,637    extern int     esl_sq_SetSource      (ESL_SQ *sq, const char *source);
2023-10-22T15:06:31,637                   ^
2023-10-22T15:06:31,638   vendor/easel/esl_sq.c:1165:1: note: ‘esl_sq_SetSource’ was previously declared here
2023-10-22T15:06:31,638    esl_sq_SetSource(ESL_SQ *sq, const char *source)
2023-10-22T15:06:31,638    ^
2023-10-22T15:06:31,639   vendor/easel/esl_sq.c:1165:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,639   vendor/easel/esl_sq.h:160:16: warning: type of ‘esl_sq_GrowTo’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,639    extern int     esl_sq_GrowTo(ESL_SQ *sq, int64_t  n);
2023-10-22T15:06:31,639                   ^
2023-10-22T15:06:31,640   vendor/easel/esl_sq.c:209:1: note: ‘esl_sq_GrowTo’ was previously declared here
2023-10-22T15:06:31,640    esl_sq_GrowTo(ESL_SQ *sq, int64_t n)
2023-10-22T15:06:31,640    ^
2023-10-22T15:06:31,641   vendor/easel/esl_sq.c:209:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,641   vendor/hmmer/src/hmmer.h:1647:12: warning: type of ‘p7_pli_NewSeq’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,641    extern int p7_pli_NewSeq            (P7_PIPELINE *pli, const ESL_SQ *sq);
2023-10-22T15:06:31,642               ^
2023-10-22T15:06:31,642   vendor/hmmer/src/p7_pipeline.c:576:1: note: ‘p7_pli_NewSeq’ was previously declared here
2023-10-22T15:06:31,642    p7_pli_NewSeq(P7_PIPELINE *pli, const ESL_SQ *sq)
2023-10-22T15:06:31,642    ^
2023-10-22T15:06:31,643   vendor/hmmer/src/p7_pipeline.c:576:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,643   vendor/easel/esl_sq.h:179:16: warning: type of ‘esl_sq_ReverseComplement’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,643    extern int     esl_sq_ReverseComplement(ESL_SQ *sq);
2023-10-22T15:06:31,644                   ^
2023-10-22T15:06:31,644   vendor/easel/esl_sq.c:1536:1: note: ‘esl_sq_ReverseComplement’ was previously declared here
2023-10-22T15:06:31,644    esl_sq_ReverseComplement(ESL_SQ *sq)
2023-10-22T15:06:31,644    ^
2023-10-22T15:06:31,645   vendor/easel/esl_sq.c:1536:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,645   vendor/hmmer/src/hmmer.h:1649:12: warning: type of ‘p7_Pipeline_LongTarget’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,646    extern int p7_Pipeline_LongTarget   (P7_PIPELINE *pli, P7_OPROFILE *om, P7_SCOREDATA *data,
2023-10-22T15:06:31,646               ^
2023-10-22T15:06:31,646   vendor/hmmer/src/p7_pipeline.c:1496:1: note: ‘p7_Pipeline_LongTarget’ was previously declared here
2023-10-22T15:06:31,647    p7_Pipeline_LongTarget(P7_PIPELINE *pli, P7_OPROFILE *om, P7_SCOREDATA *data,
2023-10-22T15:06:31,647    ^
2023-10-22T15:06:31,647   vendor/hmmer/src/p7_pipeline.c:1496:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,647   vendor/easel/esl_sq.h:163:16: warning: type of ‘esl_sq_Reuse’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,648    extern int     esl_sq_Reuse    (ESL_SQ *sq);
2023-10-22T15:06:31,648                   ^
2023-10-22T15:06:31,648   vendor/easel/esl_sq.c:443:1: note: ‘esl_sq_Reuse’ was previously declared here
2023-10-22T15:06:31,649    esl_sq_Reuse(ESL_SQ *sq)
2023-10-22T15:06:31,649    ^
2023-10-22T15:06:31,649   vendor/easel/esl_sq.c:443:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,650   vendor/easel/esl_sq.h:166:16: warning: type of ‘esl_sq_Destroy’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,650    extern void    esl_sq_Destroy  (ESL_SQ *sq);
2023-10-22T15:06:31,650                   ^
2023-10-22T15:06:31,650   vendor/easel/esl_sq.c:550:1: note: ‘esl_sq_Destroy’ was previously declared here
2023-10-22T15:06:31,651    esl_sq_Destroy(ESL_SQ *sq)
2023-10-22T15:06:31,651    ^
2023-10-22T15:06:31,651   vendor/easel/esl_sq.c:550:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,652   vendor/hmmer/src/hmmer.h:1673:20: warning: type of ‘p7_profile_Reuse’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,652    extern int         p7_profile_Reuse(P7_PROFILE *gm);
2023-10-22T15:06:31,652                       ^
2023-10-22T15:06:31,653   vendor/hmmer/src/p7_profile.c:242:1: note: ‘p7_profile_Reuse’ was previously declared here
2023-10-22T15:06:31,653    p7_profile_Reuse(P7_PROFILE *gm)
2023-10-22T15:06:31,653    ^
2023-10-22T15:06:31,653   vendor/hmmer/src/p7_profile.c:242:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,654   vendor/hmmer/src/hmmer.h:1467:12: warning: type of ‘p7_tracealign_computeTraces’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,654    extern int p7_tracealign_computeTraces(P7_HMM *hmm, ESL_SQ  **sq, int offset, int N, P7_TRACE  **tr);
2023-10-22T15:06:31,654               ^
2023-10-22T15:06:31,655   vendor/hmmer/src/tracealign.c:236:1: note: ‘p7_tracealign_computeTraces’ was previously declared here
2023-10-22T15:06:31,655    p7_tracealign_computeTraces(P7_HMM *hmm, ESL_SQ  **sq, int offset, int N, P7_TRACE  **tr)
2023-10-22T15:06:31,655    ^
2023-10-22T15:06:31,656   vendor/hmmer/src/tracealign.c:236:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,656   vendor/hmmer/src/impl_neon/impl_neon.h:284:21: warning: type of ‘p7_oprofile_ReconfigMultihit’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,657    extern int          p7_oprofile_ReconfigMultihit  (P7_OPROFILE *om, int L);
2023-10-22T15:06:31,657                        ^
2023-10-22T15:06:31,658   vendor/hmmer/src/impl_neon/p7_oprofile.c:1166:1: note: ‘p7_oprofile_ReconfigMultihit’ was previously declared here
2023-10-22T15:06:31,658    p7_oprofile_ReconfigMultihit(P7_OPROFILE *om, int L)
2023-10-22T15:06:31,658    ^
2023-10-22T15:06:31,658   vendor/hmmer/src/impl_neon/p7_oprofile.c:1166:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,659   vendor/hmmer/src/impl_neon/impl_neon.h:285:21: warning: type of ‘p7_oprofile_ReconfigUnihit’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,659    extern int          p7_oprofile_ReconfigUnihit    (P7_OPROFILE *om, int L);
2023-10-22T15:06:31,659                        ^
2023-10-22T15:06:31,660   vendor/hmmer/src/impl_neon/p7_oprofile.c:1191:1: note: ‘p7_oprofile_ReconfigUnihit’ was previously declared here
2023-10-22T15:06:31,660    p7_oprofile_ReconfigUnihit(P7_OPROFILE *om, int L)
2023-10-22T15:06:31,660    ^
2023-10-22T15:06:31,660   vendor/hmmer/src/impl_neon/p7_oprofile.c:1191:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,661   vendor/hmmer/src/hmmer.h:1427:12: warning: type of ‘p7_ReconfigMultihit’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,661    extern int p7_ReconfigMultihit(P7_PROFILE *gm, int L);
2023-10-22T15:06:31,661               ^
2023-10-22T15:06:31,662   vendor/hmmer/src/modelconfig.c:256:1: note: ‘p7_ReconfigMultihit’ was previously declared here
2023-10-22T15:06:31,662    p7_ReconfigMultihit(P7_PROFILE *gm, int L)
2023-10-22T15:06:31,662    ^
2023-10-22T15:06:31,663   vendor/hmmer/src/modelconfig.c:256:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,663   vendor/hmmer/src/hmmer.h:1428:12: warning: type of ‘p7_ReconfigUnihit’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,663    extern int p7_ReconfigUnihit  (P7_PROFILE *gm, int L);
2023-10-22T15:06:31,664               ^
2023-10-22T15:06:31,664   vendor/hmmer/src/modelconfig.c:276:1: note: ‘p7_ReconfigUnihit’ was previously declared here
2023-10-22T15:06:31,664    p7_ReconfigUnihit(P7_PROFILE *gm, int L)
2023-10-22T15:06:31,665    ^
2023-10-22T15:06:31,665   vendor/hmmer/src/modelconfig.c:276:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,665   vendor/hmmer/src/hmmer.h:1432:15: warning: type of ‘p7_MeanMatchEntropy’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,666    extern double p7_MeanMatchEntropy        (const P7_HMM *hmm);
2023-10-22T15:06:31,666                  ^
2023-10-22T15:06:31,666   vendor/hmmer/src/modelstats.c:53:1: note: ‘p7_MeanMatchEntropy’ was previously declared here
2023-10-22T15:06:31,667    p7_MeanMatchEntropy(const P7_HMM *hmm)
2023-10-22T15:06:31,667    ^
2023-10-22T15:06:31,667   vendor/hmmer/src/modelstats.c:53:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,667   vendor/hmmer/src/hmmer.h:1431:15: warning: type of ‘p7_MeanMatchInfo’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,668    extern double p7_MeanMatchInfo           (const P7_HMM *hmm, const P7_BG *bg);
2023-10-22T15:06:31,668                  ^
2023-10-22T15:06:31,668   vendor/hmmer/src/modelstats.c:34:1: note: ‘p7_MeanMatchInfo’ was previously declared here
2023-10-22T15:06:31,669    p7_MeanMatchInfo(const P7_HMM *hmm, const P7_BG *bg)
2023-10-22T15:06:31,669    ^
2023-10-22T15:06:31,669   vendor/hmmer/src/modelstats.c:34:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,670   vendor/hmmer/src/hmmer.h:1433:15: warning: type of ‘p7_MeanMatchRelativeEntropy’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,670    extern double p7_MeanMatchRelativeEntropy(const P7_HMM *hmm, const P7_BG *bg);
2023-10-22T15:06:31,670                  ^
2023-10-22T15:06:31,670   vendor/hmmer/src/modelstats.c:80:1: note: ‘p7_MeanMatchRelativeEntropy’ was previously declared here
2023-10-22T15:06:31,671    p7_MeanMatchRelativeEntropy(const P7_HMM *hmm, const P7_BG *bg)
2023-10-22T15:06:31,671    ^
2023-10-22T15:06:31,671   vendor/hmmer/src/modelstats.c:80:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,672   pyhmmer/reexports/p7_hmmfile.h:10:12: warning: type of ‘read_asc20hmm’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,672    extern int read_asc20hmm(P7_HMMFILE* hfp, ESL_ALPHABET** ret_abc, P7_HMM** opt_hmm);
2023-10-22T15:06:31,672               ^
2023-10-22T15:06:31,673   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1707:1: note: ‘read_asc20hmm’ was previously declared here
2023-10-22T15:06:31,673    read_asc20hmm(P7_HMMFILE *hfp, ESL_ALPHABET **ret_abc, P7_HMM **opt_hmm)
2023-10-22T15:06:31,673    ^
2023-10-22T15:06:31,673   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1707:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,674   pyhmmer/reexports/p7_hmmfile.h:11:12: warning: type of ‘read_asc30hmm’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,674    extern int read_asc30hmm(P7_HMMFILE* hfp, ESL_ALPHABET** ret_abc, P7_HMM** opt_hmm);
2023-10-22T15:06:31,674               ^
2023-10-22T15:06:31,675   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1245:1: note: ‘read_asc30hmm’ was previously declared here
2023-10-22T15:06:31,675    read_asc30hmm(P7_HMMFILE *hfp, ESL_ALPHABET **ret_abc, P7_HMM **opt_hmm)
2023-10-22T15:06:31,675    ^
2023-10-22T15:06:31,676   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1245:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,676   pyhmmer/reexports/p7_hmmfile.h:12:12: warning: type of ‘read_bin30hmm’ does not match original declaration [-Wlto-type-mismatch]
2023-10-22T15:06:31,677    extern int read_bin30hmm(P7_HMMFILE* hfp, ESL_ALPHABET** ret_abc, P7_HMM** opt_hmm);
2023-10-22T15:06:31,677               ^
2023-10-22T15:06:31,677   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1585:1: note: ‘read_bin30hmm’ was previously declared here
2023-10-22T15:06:31,677    read_bin30hmm(P7_HMMFILE *hfp, ESL_ALPHABET **ret_abc, P7_HMM **opt_hmm)
2023-10-22T15:06:31,678    ^
2023-10-22T15:06:31,678   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1585:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-10-22T15:06:31,678   building 'pyhmmer.daemon' extension
2023-10-22T15:06:31,679   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -DHAS_PYINTERPRETERSTATE_GETID=1 -DeslENABLE_NEON=1 -DCYTHON_WITHOUT_ASSERTIONS=1 -Ibuild/temp.linux-armv7l-cpython-37 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ivendor/easel -I/usr/include/python3.7m -c pyhmmer/daemon.c -o build/temp.linux-armv7l-cpython-37/pyhmmer/daemon.o -mfpu=neon -Wno-unused-variable
2023-10-22T15:08:07,270   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro build/temp.linux-armv7l-cpython-37/pyhmmer/daemon.o build/temp.linux-armv7l-cpython-37/libhmmer.a build/temp.linux-armv7l-cpython-37/libeasel.a build/temp.linux-armv7l-cpython-37/libdivsufsort.a -Lbuild/temp.linux-armv7l-cpython-37 -L/usr/lib -Lbuild/temp.linux-armv7l-cpython-37 -lhmmer -leasel -ldivsufsort -ldivsufsort -leasel -lhmmer -o build/lib.linux-armv7l-cpython-37/pyhmmer/daemon.cpython-37m-arm-linux-gnueabihf.so -mfpu=neon
2023-10-22T15:10:00,087   installing to build/bdist.linux-armv7l/wheel
2023-10-22T15:10:00,088   running install
2023-10-22T15:10:00,152   running install_lib
2023-10-22T15:10:00,169   creating build/bdist.linux-armv7l
2023-10-22T15:10:00,170   creating build/bdist.linux-armv7l/wheel
2023-10-22T15:10:00,174   creating build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:10:00,177   copying build/lib.linux-armv7l-cpython-37/pyhmmer/hmmer.py -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:10:00,184   copying build/lib.linux-armv7l-cpython-37/pyhmmer/errors.pyi -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:10:00,188   copying build/lib.linux-armv7l-cpython-37/pyhmmer/plan7.pyi -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:10:00,195   creating build/bdist.linux-armv7l/wheel/pyhmmer/fileobj
2023-10-22T15:10:00,196   copying build/lib.linux-armv7l-cpython-37/pyhmmer/fileobj/__init__.pxd -> build/bdist.linux-armv7l/wheel/pyhmmer/fileobj
2023-10-22T15:10:00,200   copying build/lib.linux-armv7l-cpython-37/pyhmmer/fileobj/linux.h -> build/bdist.linux-armv7l/wheel/pyhmmer/fileobj
2023-10-22T15:10:00,204   copying build/lib.linux-armv7l-cpython-37/pyhmmer/fileobj/bsd.h -> build/bdist.linux-armv7l/wheel/pyhmmer/fileobj
2023-10-22T15:10:00,208   copying build/lib.linux-armv7l-cpython-37/pyhmmer/fileobj/bsd.pxd -> build/bdist.linux-armv7l/wheel/pyhmmer/fileobj
2023-10-22T15:10:00,212   copying build/lib.linux-armv7l-cpython-37/pyhmmer/fileobj/util.h -> build/bdist.linux-armv7l/wheel/pyhmmer/fileobj
2023-10-22T15:10:00,216   copying build/lib.linux-armv7l-cpython-37/pyhmmer/fileobj/linux.pxd -> build/bdist.linux-armv7l/wheel/pyhmmer/fileobj
2023-10-22T15:10:00,221   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests
2023-10-22T15:10:00,223   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_hmmer.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests
2023-10-22T15:10:00,230   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/data
2023-10-22T15:10:00,233   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms
2023-10-22T15:10:00,236   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/bin
2023-10-22T15:10:00,238   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/bin/PF02826.h3m -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/bin
2023-10-22T15:10:00,246   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/bin/PKSI-AT.h3m -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/bin
2023-10-22T15:10:00,255   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/bin/t2pks.h3m -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/bin
2023-10-22T15:10:00,387   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/bin/Thioesterase.h3m -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/bin
2023-10-22T15:10:00,395   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:10:00,397   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/PF02826.hmm.h3f -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:10:00,402   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3m -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:10:00,408   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3p -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:10:00,416   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3i -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:10:00,420   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3p -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:10:00,426   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3m -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:10:00,434   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3f -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:10:00,439   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3i -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:10:00,443   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/PKSI-AT.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:10:00,455   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/PF02826.hmm.h3i -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:10:00,459   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/PF02826.hmm.h3m -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:10:00,465   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/t2pks.hmm.h3m -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:10:00,592   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3f -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:10:00,597   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/t2pks.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:10:00,813   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/Thioesterase.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:10:00,824   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/t2pks.hmm.h3p -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:10:00,952   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/PF02826.hmm.h3p -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:10:00,958   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/PF02826.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:10:00,967   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/t2pks.hmm.h3i -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:10:00,970   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/t2pks.hmm.h3f -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:10:01,028   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/make.sh -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms
2023-10-22T15:10:01,033   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt2
2023-10-22T15:10:01,035   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt2/PF02826.hmm2 -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt2
2023-10-22T15:10:01,044   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt2/Thioesterase.hmm2 -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt2
2023-10-22T15:10:01,056   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt2/PKSI-AT.hmm2 -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt2
2023-10-22T15:10:01,066   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt2/t2pks.hmm2 -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt2
2023-10-22T15:10:01,306   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt
2023-10-22T15:10:01,308   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt/LuxC.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt
2023-10-22T15:10:01,321   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt/bmyD.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt
2023-10-22T15:10:01,337   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt/PKSI-AT.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt
2023-10-22T15:10:01,349   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt/laccase.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt
2023-10-22T15:10:01,370   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt/t2pks.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt
2023-10-22T15:10:01,617   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt/Thioesterase.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt
2023-10-22T15:10:01,628   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt/PF02826.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt
2023-10-22T15:10:01,638   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/tables
2023-10-22T15:10:01,640   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables/bmyD3.tbl -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/tables
2023-10-22T15:10:01,645   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables/t2pks.tbl -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/tables
2023-10-22T15:10:01,651   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables/PF02826.tbl -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/tables
2023-10-22T15:10:01,656   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables/PF02826.domtbl -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/tables
2023-10-22T15:10:01,661   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables/t2pks.scan.tbl -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/tables
2023-10-22T15:10:01,666   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables/bmyD2.tbl -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/tables
2023-10-22T15:10:01,670   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables/t2pks.domtbl -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/tables
2023-10-22T15:10:01,676   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables/bmyD1.tbl -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/tables
2023-10-22T15:10:01,679   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables/A0A089QRB9.domtbl -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/tables
2023-10-22T15:10:01,685   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/seqs
2023-10-22T15:10:01,686   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs/LuxC.faa -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/seqs
2023-10-22T15:10:01,691   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs/PKSI.faa -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/seqs
2023-10-22T15:10:01,696   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs/bmyD.fna -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/seqs
2023-10-22T15:10:01,699   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs/BGC0001090.gbk -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/seqs
2023-10-22T15:10:01,713   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs/CP040672.1.genes_100.fna -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/seqs
2023-10-22T15:10:01,723   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs/938293.PRJEB85.HG003687.faa -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/seqs
2023-10-22T15:10:01,779   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs/CP000560.2.fna -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/seqs
2023-10-22T15:10:01,977   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/msa
2023-10-22T15:10:01,978   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/msa/LuxC.hmmalign.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/msa
2023-10-22T15:10:01,983   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/msa/LuxC.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/msa
2023-10-22T15:10:01,988   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/msa/LuxC.faa -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/msa
2023-10-22T15:10:01,992   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/msa/laccase.clw -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/msa
2023-10-22T15:10:01,998   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-10-22T15:10:01,999   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer/KR-3.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-10-22T15:10:02,004   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer/KR-6.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-10-22T15:10:02,009   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer/KR-4.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-10-22T15:10:02,014   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer/p12748-2.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-10-22T15:10:02,019   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer/p12748-3.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-10-22T15:10:02,023   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer/KR-1_bkup.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-10-22T15:10:02,027   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer/KR-2.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-10-22T15:10:02,032   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer/KR-1.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-10-22T15:10:02,036   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer/p12748-1.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-10-22T15:10:02,039   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer/KR-5.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-10-22T15:10:02,044   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/README.md -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data
2023-10-22T15:10:02,048   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/requirements.txt -> build/bdist.linux-armv7l/wheel/pyhmmer/tests
2023-10-22T15:10:02,053   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-10-22T15:10:02,054   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel/test_matrix.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-10-22T15:10:02,059   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel/test_msa.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-10-22T15:10:02,063   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel/test_sequence.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-10-22T15:10:02,068   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel/test_sequencefile.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-10-22T15:10:02,072   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel/test_gencode.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-10-22T15:10:02,076   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel/test_vector.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-10-22T15:10:02,080   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel/__init__.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-10-22T15:10:02,083   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel/test_alphabet.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-10-22T15:10:02,087   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel/test_bitfield.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-10-22T15:10:02,090   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel/test_keyhash.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-10-22T15:10:02,094   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel/test_msafile.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-10-22T15:10:02,099   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel/test_block.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-10-22T15:10:02,103   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel/test_ssi.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-10-22T15:10:02,106   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel/test_randomness.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-10-22T15:10:02,110   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_errors.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests
2023-10-22T15:10:02,113   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/utils.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests
2023-10-22T15:10:02,116   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/__init__.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests
2023-10-22T15:10:02,121   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-10-22T15:10:02,123   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7/test_background.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-10-22T15:10:02,127   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7/test_hit.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-10-22T15:10:02,131   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7/test_hmm.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-10-22T15:10:02,135   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7/test_traces.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-10-22T15:10:02,138   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7/test_builder.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-10-22T15:10:02,143   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7/test_optimizedprofile.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-10-22T15:10:02,146   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7/test_tophits.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-10-22T15:10:02,151   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7/test_pipeline.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-10-22T15:10:02,155   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7/test_tracealigner.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-10-22T15:10:02,159   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7/__init__.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-10-22T15:10:02,162   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7/test_profile.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-10-22T15:10:02,166   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7/test_hmmfile.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-10-22T15:10:02,169   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7/test_block.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-10-22T15:10:02,174   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_doctest.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests
2023-10-22T15:10:02,179   creating build/bdist.linux-armv7l/wheel/pyhmmer/reexports
2023-10-22T15:10:02,180   copying build/lib.linux-armv7l-cpython-37/pyhmmer/reexports/p7_tophits.h -> build/bdist.linux-armv7l/wheel/pyhmmer/reexports
2023-10-22T15:10:02,184   copying build/lib.linux-armv7l-cpython-37/pyhmmer/reexports/__init__.pxd -> build/bdist.linux-armv7l/wheel/pyhmmer/reexports
2023-10-22T15:10:02,187   copying build/lib.linux-armv7l-cpython-37/pyhmmer/reexports/p7_hmmfile.pxd -> build/bdist.linux-armv7l/wheel/pyhmmer/reexports
2023-10-22T15:10:02,190   copying build/lib.linux-armv7l-cpython-37/pyhmmer/reexports/p7_tophits.pxd -> build/bdist.linux-armv7l/wheel/pyhmmer/reexports
2023-10-22T15:10:02,194   copying build/lib.linux-armv7l-cpython-37/pyhmmer/reexports/esl_sqio_ascii.h -> build/bdist.linux-armv7l/wheel/pyhmmer/reexports
2023-10-22T15:10:02,197   copying build/lib.linux-armv7l-cpython-37/pyhmmer/reexports/p7_hmmfile.h -> build/bdist.linux-armv7l/wheel/pyhmmer/reexports
2023-10-22T15:10:02,201   copying build/lib.linux-armv7l-cpython-37/pyhmmer/reexports/esl_sqio_ascii.pxd -> build/bdist.linux-armv7l/wheel/pyhmmer/reexports
2023-10-22T15:10:02,204   copying build/lib.linux-armv7l-cpython-37/pyhmmer/daemon.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:10:02,258   copying build/lib.linux-armv7l-cpython-37/pyhmmer/plan7.pxd -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:10:02,263   copying build/lib.linux-armv7l-cpython-37/pyhmmer/easel.pyx -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:10:02,280   copying build/lib.linux-armv7l-cpython-37/pyhmmer/plan7.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:10:02,517   copying build/lib.linux-armv7l-cpython-37/pyhmmer/utils.py -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:10:02,521   copying build/lib.linux-armv7l-cpython-37/pyhmmer/errors.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:10:02,539   copying build/lib.linux-armv7l-cpython-37/pyhmmer/__init__.py -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:10:02,543   copying build/lib.linux-armv7l-cpython-37/pyhmmer/_getid.pxi -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:10:02,547   copying build/lib.linux-armv7l-cpython-37/pyhmmer/easel.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:10:02,661   copying build/lib.linux-armv7l-cpython-37/pyhmmer/daemon.pyx -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:10:02,666   copying build/lib.linux-armv7l-cpython-37/pyhmmer/daemon.pyi -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:10:02,670   copying build/lib.linux-armv7l-cpython-37/pyhmmer/plan7.pyx -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:10:02,692   copying build/lib.linux-armv7l-cpython-37/pyhmmer/easel.pyi -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:10:02,697   copying build/lib.linux-armv7l-cpython-37/pyhmmer/daemon.pxd -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:10:02,700   copying build/lib.linux-armv7l-cpython-37/pyhmmer/exceptions.pxi -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:10:02,704   copying build/lib.linux-armv7l-cpython-37/pyhmmer/easel.pxd -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:10:02,708   copying build/lib.linux-armv7l-cpython-37/pyhmmer/py.typed -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:10:02,711   copying build/lib.linux-armv7l-cpython-37/pyhmmer/errors.pyx -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:10:02,715   running install_egg_info
2023-10-22T15:10:02,742   Copying pyhmmer.egg-info to build/bdist.linux-armv7l/wheel/pyhmmer-0.10.3-py3.7.egg-info
2023-10-22T15:10:02,770   running install_scripts
2023-10-22T15:10:02,896   creating build/bdist.linux-armv7l/wheel/pyhmmer-0.10.3.dist-info/WHEEL
2023-10-22T15:10:02,902   creating '/tmp/pip-wheel-nmacn_y3/.tmp-30od_6ss/pyhmmer-0.10.3-cp37-cp37m-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-10-22T15:10:02,908   adding 'pyhmmer/__init__.py'
2023-10-22T15:10:02,911   adding 'pyhmmer/_getid.pxi'
2023-10-22T15:10:03,395   adding 'pyhmmer/daemon.cpython-37m-arm-linux-gnueabihf.so'
2023-10-22T15:10:03,417   adding 'pyhmmer/daemon.pxd'
2023-10-22T15:10:03,421   adding 'pyhmmer/daemon.pyi'
2023-10-22T15:10:03,430   adding 'pyhmmer/daemon.pyx'
2023-10-22T15:10:04,838   adding 'pyhmmer/easel.cpython-37m-arm-linux-gnueabihf.so'
2023-10-22T15:10:04,904   adding 'pyhmmer/easel.pxd'
2023-10-22T15:10:04,910   adding 'pyhmmer/easel.pyi'
2023-10-22T15:10:04,965   adding 'pyhmmer/easel.pyx'
2023-10-22T15:10:05,075   adding 'pyhmmer/errors.cpython-37m-arm-linux-gnueabihf.so'
2023-10-22T15:10:05,083   adding 'pyhmmer/errors.pyi'
2023-10-22T15:10:05,087   adding 'pyhmmer/errors.pyx'
2023-10-22T15:10:05,091   adding 'pyhmmer/exceptions.pxi'
2023-10-22T15:10:05,107   adding 'pyhmmer/hmmer.py'
2023-10-22T15:10:07,208   adding 'pyhmmer/plan7.cpython-37m-arm-linux-gnueabihf.so'
2023-10-22T15:10:07,307   adding 'pyhmmer/plan7.pxd'
2023-10-22T15:10:07,315   adding 'pyhmmer/plan7.pyi'
2023-10-22T15:10:07,390   adding 'pyhmmer/plan7.pyx'
2023-10-22T15:10:07,400   adding 'pyhmmer/py.typed'
2023-10-22T15:10:07,404   adding 'pyhmmer/utils.py'
2023-10-22T15:10:07,408   adding 'pyhmmer/fileobj/__init__.pxd'
2023-10-22T15:10:07,412   adding 'pyhmmer/fileobj/bsd.h'
2023-10-22T15:10:07,415   adding 'pyhmmer/fileobj/bsd.pxd'
2023-10-22T15:10:07,419   adding 'pyhmmer/fileobj/linux.h'
2023-10-22T15:10:07,422   adding 'pyhmmer/fileobj/linux.pxd'
2023-10-22T15:10:07,425   adding 'pyhmmer/fileobj/util.h'
2023-10-22T15:10:07,429   adding 'pyhmmer/reexports/__init__.pxd'
2023-10-22T15:10:07,433   adding 'pyhmmer/reexports/esl_sqio_ascii.h'
2023-10-22T15:10:07,436   adding 'pyhmmer/reexports/esl_sqio_ascii.pxd'
2023-10-22T15:10:07,440   adding 'pyhmmer/reexports/p7_hmmfile.h'
2023-10-22T15:10:07,442   adding 'pyhmmer/reexports/p7_hmmfile.pxd'
2023-10-22T15:10:07,445   adding 'pyhmmer/reexports/p7_tophits.h'
2023-10-22T15:10:07,447   adding 'pyhmmer/reexports/p7_tophits.pxd'
2023-10-22T15:10:07,451   adding 'pyhmmer/tests/__init__.py'
2023-10-22T15:10:07,454   adding 'pyhmmer/tests/requirements.txt'
2023-10-22T15:10:07,457   adding 'pyhmmer/tests/test_doctest.py'
2023-10-22T15:10:07,460   adding 'pyhmmer/tests/test_errors.py'
2023-10-22T15:10:07,467   adding 'pyhmmer/tests/test_hmmer.py'
2023-10-22T15:10:07,470   adding 'pyhmmer/tests/utils.py'
2023-10-22T15:10:07,474   adding 'pyhmmer/tests/data/README.md'
2023-10-22T15:10:07,478   adding 'pyhmmer/tests/data/hmms/make.sh'
2023-10-22T15:10:07,486   adding 'pyhmmer/tests/data/hmms/bin/PF02826.h3m'
2023-10-22T15:10:07,498   adding 'pyhmmer/tests/data/hmms/bin/PKSI-AT.h3m'
2023-10-22T15:10:07,508   adding 'pyhmmer/tests/data/hmms/bin/Thioesterase.h3m'
2023-10-22T15:10:07,922   adding 'pyhmmer/tests/data/hmms/bin/t2pks.h3m'
2023-10-22T15:10:08,007   adding 'pyhmmer/tests/data/hmms/db/PF02826.hmm'
2023-10-22T15:10:08,013   adding 'pyhmmer/tests/data/hmms/db/PF02826.hmm.h3f'
2023-10-22T15:10:08,016   adding 'pyhmmer/tests/data/hmms/db/PF02826.hmm.h3i'
2023-10-22T15:10:08,026   adding 'pyhmmer/tests/data/hmms/db/PF02826.hmm.h3m'
2023-10-22T15:10:08,038   adding 'pyhmmer/tests/data/hmms/db/PF02826.hmm.h3p'
2023-10-22T15:10:08,101   adding 'pyhmmer/tests/data/hmms/db/PKSI-AT.hmm'
2023-10-22T15:10:08,110   adding 'pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3f'
2023-10-22T15:10:08,113   adding 'pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3i'
2023-10-22T15:10:08,124   adding 'pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3m'
2023-10-22T15:10:08,144   adding 'pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3p'
2023-10-22T15:10:08,196   adding 'pyhmmer/tests/data/hmms/db/Thioesterase.hmm'
2023-10-22T15:10:08,204   adding 'pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3f'
2023-10-22T15:10:08,207   adding 'pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3i'
2023-10-22T15:10:08,217   adding 'pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3m'
2023-10-22T15:10:08,236   adding 'pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3p'
2023-10-22T15:10:10,415   adding 'pyhmmer/tests/data/hmms/db/t2pks.hmm'
2023-10-22T15:10:10,835   adding 'pyhmmer/tests/data/hmms/db/t2pks.hmm.h3f'
2023-10-22T15:10:10,860   adding 'pyhmmer/tests/data/hmms/db/t2pks.hmm.h3i'
2023-10-22T15:10:11,271   adding 'pyhmmer/tests/data/hmms/db/t2pks.hmm.h3m'
2023-10-22T15:10:12,092   adding 'pyhmmer/tests/data/hmms/db/t2pks.hmm.h3p'
2023-10-22T15:10:12,227   adding 'pyhmmer/tests/data/hmms/txt/LuxC.hmm'
2023-10-22T15:10:12,265   adding 'pyhmmer/tests/data/hmms/txt/PF02826.hmm'
2023-10-22T15:10:12,328   adding 'pyhmmer/tests/data/hmms/txt/PKSI-AT.hmm'
2023-10-22T15:10:12,381   adding 'pyhmmer/tests/data/hmms/txt/Thioesterase.hmm'
2023-10-22T15:10:12,405   adding 'pyhmmer/tests/data/hmms/txt/bmyD.hmm'
2023-10-22T15:10:12,496   adding 'pyhmmer/tests/data/hmms/txt/laccase.hmm'
2023-10-22T15:10:14,667   adding 'pyhmmer/tests/data/hmms/txt/t2pks.hmm'
2023-10-22T15:10:14,810   adding 'pyhmmer/tests/data/hmms/txt2/PF02826.hmm2'
2023-10-22T15:10:14,849   adding 'pyhmmer/tests/data/hmms/txt2/PKSI-AT.hmm2'
2023-10-22T15:10:14,883   adding 'pyhmmer/tests/data/hmms/txt2/Thioesterase.hmm2'
2023-10-22T15:10:16,475   adding 'pyhmmer/tests/data/hmms/txt2/t2pks.hmm2'
2023-10-22T15:10:16,575   adding 'pyhmmer/tests/data/jackhmmer/KR-1.sto'
2023-10-22T15:10:16,579   adding 'pyhmmer/tests/data/jackhmmer/KR-1_bkup.sto'
2023-10-22T15:10:16,583   adding 'pyhmmer/tests/data/jackhmmer/KR-2.sto'
2023-10-22T15:10:16,588   adding 'pyhmmer/tests/data/jackhmmer/KR-3.sto'
2023-10-22T15:10:16,593   adding 'pyhmmer/tests/data/jackhmmer/KR-4.sto'
2023-10-22T15:10:16,599   adding 'pyhmmer/tests/data/jackhmmer/KR-5.sto'
2023-10-22T15:10:16,604   adding 'pyhmmer/tests/data/jackhmmer/KR-6.sto'
2023-10-22T15:10:16,608   adding 'pyhmmer/tests/data/jackhmmer/p12748-1.sto'
2023-10-22T15:10:16,611   adding 'pyhmmer/tests/data/jackhmmer/p12748-2.sto'
2023-10-22T15:10:16,614   adding 'pyhmmer/tests/data/jackhmmer/p12748-3.sto'
2023-10-22T15:10:16,619   adding 'pyhmmer/tests/data/msa/LuxC.faa'
2023-10-22T15:10:16,623   adding 'pyhmmer/tests/data/msa/LuxC.hmmalign.sto'
2023-10-22T15:10:16,628   adding 'pyhmmer/tests/data/msa/LuxC.sto'
2023-10-22T15:10:16,632   adding 'pyhmmer/tests/data/msa/laccase.clw'
2023-10-22T15:10:16,951   adding 'pyhmmer/tests/data/seqs/938293.PRJEB85.HG003687.faa'
2023-10-22T15:10:17,063   adding 'pyhmmer/tests/data/seqs/BGC0001090.gbk'
2023-10-22T15:10:22,296   adding 'pyhmmer/tests/data/seqs/CP000560.2.fna'
2023-10-22T15:10:22,494   adding 'pyhmmer/tests/data/seqs/CP040672.1.genes_100.fna'
2023-10-22T15:10:22,500   adding 'pyhmmer/tests/data/seqs/LuxC.faa'
2023-10-22T15:10:22,507   adding 'pyhmmer/tests/data/seqs/PKSI.faa'
2023-10-22T15:10:22,510   adding 'pyhmmer/tests/data/seqs/bmyD.fna'
2023-10-22T15:10:22,515   adding 'pyhmmer/tests/data/tables/A0A089QRB9.domtbl'
2023-10-22T15:10:22,520   adding 'pyhmmer/tests/data/tables/PF02826.domtbl'
2023-10-22T15:10:22,523   adding 'pyhmmer/tests/data/tables/PF02826.tbl'
2023-10-22T15:10:22,526   adding 'pyhmmer/tests/data/tables/bmyD1.tbl'
2023-10-22T15:10:22,529   adding 'pyhmmer/tests/data/tables/bmyD2.tbl'
2023-10-22T15:10:22,532   adding 'pyhmmer/tests/data/tables/bmyD3.tbl'
2023-10-22T15:10:22,545   adding 'pyhmmer/tests/data/tables/t2pks.domtbl'
2023-10-22T15:10:22,550   adding 'pyhmmer/tests/data/tables/t2pks.scan.tbl'
2023-10-22T15:10:22,557   adding 'pyhmmer/tests/data/tables/t2pks.tbl'
2023-10-22T15:10:22,562   adding 'pyhmmer/tests/test_easel/__init__.py'
2023-10-22T15:10:22,565   adding 'pyhmmer/tests/test_easel/test_alphabet.py'
2023-10-22T15:10:22,567   adding 'pyhmmer/tests/test_easel/test_bitfield.py'
2023-10-22T15:10:22,571   adding 'pyhmmer/tests/test_easel/test_block.py'
2023-10-22T15:10:22,574   adding 'pyhmmer/tests/test_easel/test_gencode.py'
2023-10-22T15:10:22,577   adding 'pyhmmer/tests/test_easel/test_keyhash.py'
2023-10-22T15:10:22,580   adding 'pyhmmer/tests/test_easel/test_matrix.py'
2023-10-22T15:10:22,584   adding 'pyhmmer/tests/test_easel/test_msa.py'
2023-10-22T15:10:22,588   adding 'pyhmmer/tests/test_easel/test_msafile.py'
2023-10-22T15:10:22,591   adding 'pyhmmer/tests/test_easel/test_randomness.py'
2023-10-22T15:10:22,594   adding 'pyhmmer/tests/test_easel/test_sequence.py'
2023-10-22T15:10:22,599   adding 'pyhmmer/tests/test_easel/test_sequencefile.py'
2023-10-22T15:10:22,602   adding 'pyhmmer/tests/test_easel/test_ssi.py'
2023-10-22T15:10:22,606   adding 'pyhmmer/tests/test_easel/test_vector.py'
2023-10-22T15:10:22,610   adding 'pyhmmer/tests/test_plan7/__init__.py'
2023-10-22T15:10:22,613   adding 'pyhmmer/tests/test_plan7/test_background.py'
2023-10-22T15:10:22,616   adding 'pyhmmer/tests/test_plan7/test_block.py'
2023-10-22T15:10:22,620   adding 'pyhmmer/tests/test_plan7/test_builder.py'
2023-10-22T15:10:22,623   adding 'pyhmmer/tests/test_plan7/test_hit.py'
2023-10-22T15:10:22,627   adding 'pyhmmer/tests/test_plan7/test_hmm.py'
2023-10-22T15:10:22,630   adding 'pyhmmer/tests/test_plan7/test_hmmfile.py'
2023-10-22T15:10:22,633   adding 'pyhmmer/tests/test_plan7/test_optimizedprofile.py'
2023-10-22T15:10:22,638   adding 'pyhmmer/tests/test_plan7/test_pipeline.py'
2023-10-22T15:10:22,641   adding 'pyhmmer/tests/test_plan7/test_profile.py'
2023-10-22T15:10:22,645   adding 'pyhmmer/tests/test_plan7/test_tophits.py'
2023-10-22T15:10:22,649   adding 'pyhmmer/tests/test_plan7/test_tracealigner.py'
2023-10-22T15:10:22,652   adding 'pyhmmer/tests/test_plan7/test_traces.py'
2023-10-22T15:10:22,656   adding 'pyhmmer-0.10.3.dist-info/COPYING'
2023-10-22T15:10:22,661   adding 'pyhmmer-0.10.3.dist-info/METADATA'
2023-10-22T15:10:22,663   adding 'pyhmmer-0.10.3.dist-info/WHEEL'
2023-10-22T15:10:22,665   adding 'pyhmmer-0.10.3.dist-info/top_level.txt'
2023-10-22T15:10:22,671   adding 'pyhmmer-0.10.3.dist-info/RECORD'
2023-10-22T15:10:22,981   removing build/bdist.linux-armv7l/wheel
2023-10-22T15:10:23,090   checking whether compiler can build NEON code... yes, with -mfpu=neon
2023-10-22T15:10:23,091   checking whether <stdio.h> can be included... yes
2023-10-22T15:10:23,091   checking whether <stdlib.h> can be included... yes
2023-10-22T15:10:23,091   checking whether <string.h> can be included... yes
2023-10-22T15:10:23,092   checking whether <inttypes.h> can be included... yes
2023-10-22T15:10:23,092   checking whether <stdint.h> can be included... yes
2023-10-22T15:10:23,092   checking whether <strings.h> can be included... yes
2023-10-22T15:10:23,093   checking whether <sys/stat.h> can be included... yes
2023-10-22T15:10:23,093   checking whether <sys/types.h> can be included... yes
2023-10-22T15:10:23,093   checking whether <unistd.h> can be included... yes
2023-10-22T15:10:23,094   checking whether <endian.h> can be included... yes
2023-10-22T15:10:23,094   checking whether <netinet/in.h> can be included... yes
2023-10-22T15:10:23,094   checking whether <sys/param.h> can be included... yes
2023-10-22T15:10:23,095   checking whether <sys/sysctl.h> can be included... yes
2023-10-22T15:10:23,095   checking whether function 'aligned_alloc' is available... yes
2023-10-22T15:10:23,095   checking whether function 'erfc' is available... yes
2023-10-22T15:10:23,096   checking whether function 'getpid' is available... yes
2023-10-22T15:10:23,096   checking whether function '_mm_malloc' is available... no
2023-10-22T15:10:23,096   checking whether function 'popen' is available... yes
2023-10-22T15:10:23,097   checking whether function 'posix_memalign' is available... yes
2023-10-22T15:10:23,097   checking whether function 'strcasecmp' is available... yes
2023-10-22T15:10:23,097   checking whether function 'strsep' is available... yes
2023-10-22T15:10:23,098   checking whether function 'sysconf' is available... yes
2023-10-22T15:10:23,098   checking whether function 'sysctl' is available... yes
2023-10-22T15:10:23,098   checking whether function 'times' is available... yes
2023-10-22T15:10:23,099   checking whether function 'fseeko' is available... yes
2023-10-22T15:10:23,099   checking whether compiler can build NEON code... yes, with -mfpu=neon
2023-10-22T15:10:23,099   checking whether <endian.h> can be included... yes
2023-10-22T15:10:23,100   checking whether <inttypes.h> can be included... yes
2023-10-22T15:10:23,100   checking whether <stdint.h> can be included... yes
2023-10-22T15:10:23,100   checking whether <unistd.h> can be included... yes
2023-10-22T15:10:23,101   checking whether <sys/types.h> can be included... yes
2023-10-22T15:10:23,101   checking whether <netinet/in.h> can be included... yes
2023-10-22T15:10:23,101   checking whether <sys/param.h> can be included... yes
2023-10-22T15:10:23,101   checking whether <sys/sysctl.h> can be included... yes
2023-10-22T15:10:23,102   checking whether function 'mkstemp' is available... yes
2023-10-22T15:10:23,102   checking whether function 'popen' is available... yes
2023-10-22T15:10:23,102   checking whether function 'putenv' is available... yes
2023-10-22T15:10:23,103   checking whether function 'strcasecmp' is available... yes
2023-10-22T15:10:23,103   checking whether function 'strsep' is available... yes
2023-10-22T15:10:23,103   checking whether function 'times' is available... yes
2023-10-22T15:10:23,103   checking whether function 'getpid' is available... yes
2023-10-22T15:10:23,104   checking whether function 'sysctl' is available... yes
2023-10-22T15:10:23,104   checking whether function 'sysconf' is available... yes
2023-10-22T15:10:23,104   checking whether function 'getcwd' is available... yes
2023-10-22T15:10:23,105   checking whether function 'chmod' is available... yes
2023-10-22T15:10:23,105   checking whether function 'stat' is available... yes
2023-10-22T15:10:23,105   checking whether function 'fstat' is available... yes
2023-10-22T15:10:23,105   checking whether function 'erfc' is available... yes
2023-10-22T15:10:23,106   Building HMMER with NEON for CPU architecture: 'armv7l'
2023-10-22T15:10:23,106   performance hint: pyhmmer/exceptions.pxi:27:5: Exception check on 'py_handler' will always require the GIL to be acquired.
2023-10-22T15:10:23,106   Possible solutions:
2023-10-22T15:10:23,107   	1. Declare the function as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2023-10-22T15:10:23,107   	2. Use an 'int' return type on the function to allow an error code to be returned.
2023-10-22T15:10:23,107   performance hint: pyhmmer/easel.pyx:605:31: Exception check will always require the GIL to be acquired.
2023-10-22T15:10:23,108   Possible solutions:
2023-10-22T15:10:23,108   	1. Declare the function as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2023-10-22T15:10:23,108   	2. Use an 'int' return type on the function to allow an error code to be returned.
2023-10-22T15:10:23,108   performance hint: pyhmmer/easel.pyx:5125:35: Exception check will always require the GIL to be acquired.
2023-10-22T15:10:23,109   Possible solutions:
2023-10-22T15:10:23,109   	1. Declare the function as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2023-10-22T15:10:23,109   	2. Use an 'int' return type on the function to allow an error code to be returned.
2023-10-22T15:10:23,110   performance hint: pyhmmer/easel.pyx:5752:39: Exception check will always require the GIL to be acquired.
2023-10-22T15:10:23,110   Possible solutions:
2023-10-22T15:10:23,110   	1. Declare the function as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2023-10-22T15:10:23,111   	2. Use an 'int' return type on the function to allow an error code to be returned.
2023-10-22T15:10:23,111   performance hint: pyhmmer/exceptions.pxi:27:5: Exception check on 'py_handler' will always require the GIL to be acquired.
2023-10-22T15:10:23,111   Possible solutions:
2023-10-22T15:10:23,112   	1. Declare the function as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2023-10-22T15:10:23,112   	2. Use an 'int' return type on the function to allow an error code to be returned.
2023-10-22T15:10:23,112   performance hint: pyhmmer/plan7.pyx:2262:28: Exception check will always require the GIL to be acquired.
2023-10-22T15:10:23,112   Possible solutions:
2023-10-22T15:10:23,113   	1. Declare the function as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2023-10-22T15:10:23,113   	2. Use an 'int' return type on the function to allow an error code to be returned.
2023-10-22T15:10:23,113   performance hint: pyhmmer/plan7.pyx:6076:52: Exception check will always require the GIL to be acquired. Declare the function as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2023-10-22T15:10:23,114   performance hint: pyhmmer/plan7.pyx:7184:54: Exception check will always require the GIL to be acquired. Declare the function as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2023-10-22T15:10:23,114   performance hint: pyhmmer/plan7.pyx:7209:58: Exception check will always require the GIL to be acquired. Declare the function as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2023-10-22T15:10:23,114   performance hint: pyhmmer/plan7.pyx:7214:62: Exception check will always require the GIL to be acquired. Declare the function as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2023-10-22T15:10:23,114   checking whether `PyInterpreterState_GetID` is available
2023-10-22T15:10:23,115   yes
2023-10-22T15:10:23,115   building pyhmmer.errors for linux-armv7l with unix compiler
2023-10-22T15:10:23,115   building pyhmmer.easel for linux-armv7l with unix compiler
2023-10-22T15:10:23,116   building pyhmmer.plan7 for linux-armv7l with unix compiler
2023-10-22T15:10:23,116   building pyhmmer.daemon for linux-armv7l with unix compiler
2023-10-22T15:10:25,694   Building wheel for pyhmmer (pyproject.toml): finished with status 'done'
2023-10-22T15:10:26,415   Created wheel for pyhmmer: filename=pyhmmer-0.10.3-cp37-cp37m-linux_armv7l.whl size=12393373 sha256=83efaf8033673d2132fd21661c812feabbf20c97964ecc102eeeffe22d163da5
2023-10-22T15:10:26,417   Stored in directory: /tmp/pip-ephem-wheel-cache-jr56qi8p/wheels/d6/44/f0/3da6cca8e127185a2774572fcde201b20b7d3398b66bf3f4af
2023-10-22T15:10:26,472 Successfully built pyhmmer
2023-10-22T15:10:27,252 Removed build tracker: '/tmp/pip-build-tracker-picegkmz'