2023-10-22T15:27:57,241 Created temporary directory: /tmp/pip-build-tracker-m4n8uq9p
2023-10-22T15:27:57,243 Initialized build tracking at /tmp/pip-build-tracker-m4n8uq9p
2023-10-22T15:27:57,244 Created build tracker: /tmp/pip-build-tracker-m4n8uq9p
2023-10-22T15:27:57,244 Entered build tracker: /tmp/pip-build-tracker-m4n8uq9p
2023-10-22T15:27:57,244 Created temporary directory: /tmp/pip-wheel-d82tfrzg
2023-10-22T15:27:57,249 Created temporary directory: /tmp/pip-ephem-wheel-cache-1vfpkq37
2023-10-22T15:27:57,273 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-10-22T15:27:57,276 2 location(s) to search for versions of pyhmmer:
2023-10-22T15:27:57,276 * https://pypi.org/simple/pyhmmer/
2023-10-22T15:27:57,276 * https://www.piwheels.org/simple/pyhmmer/
2023-10-22T15:27:57,277 Fetching project page and analyzing links: https://pypi.org/simple/pyhmmer/
2023-10-22T15:27:57,277 Getting page https://pypi.org/simple/pyhmmer/
2023-10-22T15:27:57,279 Found index url https://pypi.org/simple/
2023-10-22T15:27:57,349 Fetched page https://pypi.org/simple/pyhmmer/ as application/vnd.pypi.simple.v1+json
2023-10-22T15:27:57,495   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/79/24/b9adc93653b83e3aa333588f8fe80cf6a058b97497a1a722e7a2cf5bc5b3/pyhmmer-0.1.0a1-cp35-cp35m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-10-22T15:27:57,495   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/41/5a/594c4415860394f14b94137e10f3b6264fbd452a9ed00371fef870bdd68e/pyhmmer-0.1.0a1-cp35-cp35m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-10-22T15:27:57,496   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2f/fe/4cf2fc8c5eb288fc72cbbc151d6da1b6f6e73fcba66842ed40532069902d/pyhmmer-0.1.0a1-cp36-cp36m-macosx_10_13_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-10-22T15:27:57,496   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/dd/c9/3f46d702c63e188539c28555af361e58ead4bff416799042c5ecf97805cb/pyhmmer-0.1.0a1-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-10-22T15:27:57,496   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/76/12/f5d1ef8114cc5e0ab890d562768e9a6eb253b3e3bf258f8105c1d1841c73/pyhmmer-0.1.0a1-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-10-22T15:27:57,496   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/95/b6/b92f44fcc712bc3dd621eccefe34d569a17f0ae73133f352a47fb2029c44/pyhmmer-0.1.0a1-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-10-22T15:27:57,497   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c1/b6/0ca49ee6803d761eefc93528e9e8106151e06acf77ba9f669275c01863ac/pyhmmer-0.1.0a1-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-10-22T15:27:57,497   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/be/0d/e2e21b3925af6887baf35a3e8993b5fe4863d93638138e7d5f236bcf2197/pyhmmer-0.1.0a1-cp38-cp38-macosx_10_13_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-10-22T15:27:57,497   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/56/3d/aac55b3f74ecd81ff3f619083c277ba40df45d8e6b8fc19d58eb74fab09b/pyhmmer-0.1.0a1-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-10-22T15:27:57,497   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/56/cc/11cb714fad98ed3c1689ce83a31a29d744ed34c822af3ae63b2450e6b159/pyhmmer-0.1.0a1-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-10-22T15:27:57,497   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c5/39/ca6e515c639a28632e52579a75aabe22d6bf2fe2a66cb2bd407fea81a1fe/pyhmmer-0.1.0a1-pp36-pypy3_72-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-10-22T15:27:57,498   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/92/21/bb677b42abb107adf96a8e305659779332f1faece8c3c8b8227d6c447714/pyhmmer-0.1.0a1-pp36-pypy3_72-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-10-22T15:27:57,498   Found link https://files.pythonhosted.org/packages/9d/52/5dfdc7b0b49d72f6975c789255f785fb5adaed4d316dea2c1fd5752e3671/pyhmmer-0.1.0a1.tar.gz (from https://pypi.org/simple/pyhmmer/), version: 0.1.0a1
2023-10-22T15:27:57,498   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/fb/5a/94c8ad40e16bd1b238703a8815bd68d90b0559ac8cbaa7a027d2a886978b/pyhmmer-0.1.0a2-cp35-cp35m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,498   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0d/a8/b31471655d0f09813748c9d8888587e3a1e1573f0c01c748676d03cc3c51/pyhmmer-0.1.0a2-cp35-cp35m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,499   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/da/1f/4b3aef73b2a9d4e07d56700a1a11794e6c92dd9018c1008b53e6c0e903ca/pyhmmer-0.1.0a2-cp36-cp36m-macosx_10_11_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,499   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cf/83/a386d9e2350ec96fe9d0c6d8c274c72afda82745e5586926966b0c8e678f/pyhmmer-0.1.0a2-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,499   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d0/24/aaa2a74692ac30b32f7da206479021eb206ea6e7dbb7023ad8bae97db1a4/pyhmmer-0.1.0a2-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,499   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5a/4a/d1cba5443443544a77b200f47f2ba3ab679ef974bbf51dbfefde401902f0/pyhmmer-0.1.0a2-cp37-cp37m-macosx_10_11_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,499   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d2/bf/a7d9c65a9c2660474ad72338ca47427f6f78e6ad378026edf2fdce3019f2/pyhmmer-0.1.0a2-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,500   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a8/f7/10d886b6e03cdf16a6123dc48687cf1aaa025ac2b17d902bce75d4785ea4/pyhmmer-0.1.0a2-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,500   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0c/54/8b3c37d0732fedc623776c24f703a10b069436039abc2cbbed14eff2d665/pyhmmer-0.1.0a2-cp38-cp38-macosx_10_11_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,500   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ef/4d/86ff1e09e523b7d38d5d88d507f4131d4e20348855bb73603693355baf99/pyhmmer-0.1.0a2-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,500   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/14/d7/a10594b0c3bac79e2526c5659789b38cd98675cf8bc600c7c386482f40ad/pyhmmer-0.1.0a2-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,500   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/92/f8/e76e388294f53736440bf078f3e6d407625ab53077c8da0a80c776aaf5de/pyhmmer-0.1.0a2-pp36-pypy3_72-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,501   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b0/94/945c8e50db0e658ccbda8abb26a0becd29e414bbfc9a2aa0a07329ac86b4/pyhmmer-0.1.0a2-pp36-pypy3_72-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,501   Found link https://files.pythonhosted.org/packages/a9/d8/7d1a3e189d29f5f57cfc2b5706e46d9c593228316d88d9791e4b6deaf818/pyhmmer-0.1.0a2.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5), version: 0.1.0a2
2023-10-22T15:27:57,501   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/67/dd/ffe938b4db1f8230060a11a725500da00678d2431552685541e49f56a1cd/pyhmmer-0.1.0a3-cp35-cp35m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,502   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a9/0e/8634c98e9bb007edb4d9b0504cd2325f0db0303124c2285405f422d48d60/pyhmmer-0.1.0a3-cp35-cp35m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,502   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ac/a6/5d0240be2817e6b3c876493903fdf300a05a4d27ab4ce3e71a86bb4e6e47/pyhmmer-0.1.0a3-cp36-cp36m-macosx_10_11_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,502   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5d/05/76e3a2a9e1a8d8f2cc41a56712b6f44d518d44e697d8cf4dd501540233bb/pyhmmer-0.1.0a3-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,502   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e6/0a/6f7079e3579f2729c0bd8d504f321336e981bb7e6d39cd17ec3077a5fff4/pyhmmer-0.1.0a3-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,502   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/82/43/7dd16f4ba5889baf5948f420bfb0333b10f00b247b7dc346eb1f564951e9/pyhmmer-0.1.0a3-cp37-cp37m-macosx_10_11_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,503   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/42/e3/1ae53fd316b2f4d952c9cc566068781a0e0bd676e741f328ae2c902d1490/pyhmmer-0.1.0a3-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,503   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/14/ee/8fa3f99cb062863c91e73654f21024373cae0187e5e3476275c1cf9d06f5/pyhmmer-0.1.0a3-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,503   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8c/67/4cb6f3ff89e47e060598f940d771799fdd7b1427544cd8da94ce895e9e4f/pyhmmer-0.1.0a3-cp38-cp38-macosx_10_11_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,503   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9a/61/e5f4b60a3ea29110b78672a95dac9bc165727c96732e34868f249e3422e1/pyhmmer-0.1.0a3-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,503   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/37/df/8c9ccb8baeec522b05e956beaf899596ada02a3b383dc7a8d259b69e825b/pyhmmer-0.1.0a3-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,504   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5f/78/7cd9016de0f1aa1ee2da0200224cb886959e62cb97c933553cdc7fd2560f/pyhmmer-0.1.0a3-pp36-pypy3_72-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,504   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8f/2a/abf43d38a2414b719e57bf5c5edb0803179f6d0e6a16fc2eed28cc77b6f5/pyhmmer-0.1.0a3-pp36-pypy3_72-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,504   Found link https://files.pythonhosted.org/packages/54/29/75df6ece9030041c44fff57220bf48950d4c653ddca7e02a54d4d5fc21cc/pyhmmer-0.1.0a3.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5), version: 0.1.0a3
2023-10-22T15:27:57,505   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/59/0b/15f39d875ef0cbadfd3b069916f632409989918429ec2604eec53cd7e448/pyhmmer-0.1.0a4-cp35-cp35m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,505   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/48/3c/336700ba033d737f5e839fd63e3f0aa4946a66870f7d54f3825ac34c1a95/pyhmmer-0.1.0a4-cp35-cp35m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,505   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e2/af/ed96bc98aa7c04aa0c1ecdc7bc2ff90a6fde3d4f323c23509e56a205d93d/pyhmmer-0.1.0a4-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,505   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5d/6e/4829b621577195c923ae8bf3efa95925bcb93478bee8938818043597c926/pyhmmer-0.1.0a4-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,506   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/67/90/3f2cc3b8d0d2400b4cb21655f124b1704f0b71b05a0680f6671b19ec566c/pyhmmer-0.1.0a4-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,506   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c2/da/bc625da5fac25a825470749a1a0465f15cceb4c702cb9efd8b69e76de5e7/pyhmmer-0.1.0a4-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,506   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/4c/35/22c6cb71edfcb82ef9d649d3adb11574f1f1ec930491242295c3916e7572/pyhmmer-0.1.0a4-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,506   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a0/c7/3366cd7f01c8a50a9952c1d876141630de3d6b68d4bd2067b17b121921af/pyhmmer-0.1.0a4-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,506   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/96/ab/547d16b731200d26c3295f6ae6192d6d6115d613dd3787ea0f8978478bde/pyhmmer-0.1.0a4-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,506   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/73/e4/2e4a8bc0edf07188d51fcd3b1ff17cce3efa831f76e6e16b84df1cfd3cde/pyhmmer-0.1.0a4-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,507   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8f/64/14e6ba3b80de2a4bcbfff2f876cc9b04151570d88e91d5a6496052e33072/pyhmmer-0.1.0a4-pp36-pypy3_72-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,507   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1b/9a/288358a8964913e26cc5d10e5e5a4ec01b72a33d1072d8f4c1423d24e643/pyhmmer-0.1.0a4-pp36-pypy3_72-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-10-22T15:27:57,507   Found link https://files.pythonhosted.org/packages/b6/28/6bbe80cb3e3fcf41e368bd852dcbd88914534b2bae2722a958b8bd4accfb/pyhmmer-0.1.0a4.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5), version: 0.1.0a4
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2023-10-22T15:27:57,534   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/72/56/bd664da15d6eff0e57163598b18bcb66db853fbb80da61d41a74ddba33fb/pyhmmer-0.3.0-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,534   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b4/ab/0d6313332333d9104d39748c1fbdbb312fd3a3cc9f871b4f7bbea4dc5eb8/pyhmmer-0.3.0-pp36-pypy36_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,535   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1a/84/801ca5f828500d3825b066c8006d6b501d67d57d43f1c8d95c62fb72ed21/pyhmmer-0.3.0-pp36-pypy36_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,535   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8f/e9/35bc8f987689ae229a69375d849818e3e444970e5c0a506c2ae4a9b67b37/pyhmmer-0.3.0-pp37-pypy37_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,537   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5b/ec/8fc61155ad090117ec91574677ffe7be2540b8ac1eda05aac39b04b2baf7/pyhmmer-0.3.1-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,537   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b6/2f/ed4c88a0ff74bce8781ecc75dd6d34d6d6c4f7dbb6f8fc7538812fb1bcb8/pyhmmer-0.3.1-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,537   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e3/1c/ac254f0a00b9739d4587df65f030cd15783f57feb996470cd4664e24e8b2/pyhmmer-0.3.1-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,538   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8d/fb/d87f9c26a4b58ea330e7936c4f59f0d8ecfdbc1e76aed60eaf5dd29f04ba/pyhmmer-0.3.1-pp36-pypy36_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,538   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/57/15/82f4a4b0da12cdf0d044b6624cefa7cf563a60666a81196050b9f098df71/pyhmmer-0.3.1-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,538   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f9/c6/3990e6ea23334f641730885bcdd1a2f304a2149d9f4f6f64654de88a4693/pyhmmer-0.3.1-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,538   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e3/8e/9bb0b9dc14993637bf411158a8a74498ab297d9207b27163b88025846d10/pyhmmer-0.3.1-pp37-pypy37_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,540   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e6/4c/1d63e605113d666e52d17d7e73201b3313640577f5bef5207a6bab7b06df/pyhmmer-0.4.0-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,540   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/83/55/929caad4036f3d97abd41694b19b773313afa4fe6bece2619bcd6cf81917/pyhmmer-0.4.0-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,541   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9f/f8/5d58d4f3f80c970010aea222b958c3f2e04a970c0573aa675fa805394f5a/pyhmmer-0.4.0-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,541   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5f/f9/99d353372602557b78b6aa0ca04ae84b09cf38e1ae17a8458efc9167c571/pyhmmer-0.4.0-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,546   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d6/21/3a09a81de850eb81ab720eb05bb1d1362070b1cbbc6a6b7b1edf701920d4/pyhmmer-0.4.2-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,546   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/15/c9/ffa040555c4ae3673221436506c8c272c22a53bd9e6a54efe0157d9c2972/pyhmmer-0.4.2-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,547   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/05/dc/0ed9ba672cc508bc15b4faf62a6444434e824ded77cfaf60662d90cb9601/pyhmmer-0.4.2-pp36-pypy36_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,547   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/53/9e/486d5da6d404842d00eabfbb1d7a25ffc0c49503dd7d267f1a6a701840e5/pyhmmer-0.4.2-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,547   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/68/88/b8bb0c20875f4638bb7d600c4c3dc65eb742b3a9833c730aa4915e94aa9a/pyhmmer-0.4.2-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,548   Found link https://files.pythonhosted.org/packages/2f/93/fa15885ede25f87ac2fa5e2cef12831bb8747b7e8455982ca2942ba61c7b/pyhmmer-0.4.2.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.4.2
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2023-10-22T15:27:57,548   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c9/50/caff34277134400d58687859f224f34e88a6aa7abc6b3371150c3997f7a1/pyhmmer-0.4.3-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,548   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c6/43/726fc37dd0ece9c81780c9e29b90be4493693f4c6e8edde68b3cf8189125/pyhmmer-0.4.3-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,549   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b5/6c/ec2ff99e8dc22520805ecf43ff22369a1ca0228cbd6fabfc3de0d7695481/pyhmmer-0.4.3-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,549   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f6/9a/8df126ab5ccf2278e9b3414c26f53bf01b480164abcc11c9d2d56d9f67f4/pyhmmer-0.4.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,549   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2d/63/9e0ac76ca6baae6f288983a7af56de078773b5c0d61004419d1319197f61/pyhmmer-0.4.3-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,549   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c2/30/05d945cce1855035b4bb78996bac7ce0e371e2dc82b186147e36d551e1d0/pyhmmer-0.4.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,549   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/95/94/cacfb35c7ee944e9b9dac2ba8ef20cc192958cdbf1e4e223783152251a7b/pyhmmer-0.4.3-pp36-pypy36_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,550   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ff/ba/e2347228e6bc83d22820f46bf33ed8558ce1128a60128edd2b9bd770078e/pyhmmer-0.4.3-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,550   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c5/9a/d5447b14a91a994bd2ec38a1a4880c29c93bce74e1aa7a328a794901a870/pyhmmer-0.4.3-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,550   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/eb/87/8074c4e8896b87ef161b2490f525315f70c4783e567cfc15679bdab1f059/pyhmmer-0.4.3-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,551   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/07/f0/066382b4d9e67ee4df32b0ea99a0d499739b31375505b28d87efbef0d7ce/pyhmmer-0.4.4-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,551   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ba/aa/2be9a4c359b3cde19a49800e85813b5f18f1116c5f7fb828f12f2b3d6102/pyhmmer-0.4.4-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,552   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6e/c7/d1adec561776afaf05b52a9316b4cf7922497052c82042d4c7ec790c7c96/pyhmmer-0.4.4-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,552   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b9/b0/666d105f9f9ab1881952962ae9e84beb7f4537b00deed7fda9b8ec268715/pyhmmer-0.4.4-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,552   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/82/a1/4daf57b4a7e354dfb8ce1a4083926a7383e056d295fad8a1cfbf53a2ad0a/pyhmmer-0.4.4-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,552   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6f/02/c2ac022076a9b264f91a0f7e6b08a89934d5e1435943cb8b39304cdb7447/pyhmmer-0.4.4-pp36-pypy36_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,553   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/91/78/eefaf55976164ad3550c2f76c6e9c732d79b7c68e1abbbfa98646d756a86/pyhmmer-0.4.4-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,558   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6e/bc/1a349bbc9da921811a3c5f385dcb25819223672145a033539eb8acfa762e/pyhmmer-0.4.6-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,558   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8f/b6/432a099063555660c698ddf22c27a9f0e253ea7bf0b357dbcf9deb53f552/pyhmmer-0.4.6-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,558   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/61/57/9941d06a569a34685928406e5b5d47819417a2379a26233437ca53a3484e/pyhmmer-0.4.6-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,558   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/3f/87/171796b7139a8a44ba960344487f474d65bb5f16c21a088bede3d3cdec33/pyhmmer-0.4.6-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,558   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d0/b0/5d0f1b002f50fc531485e8691224de277d329d293bde922a35f4659e73b8/pyhmmer-0.4.6-pp36-pypy36_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,559   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5e/44/cc860850904897b27fcb884a05986159a1ea08e238150aedba27f5c2a8ab/pyhmmer-0.4.6-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,559   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ce/14/ced57dff0f434c8fe2d84ed1f74b33d0dcc8b8dfd3b3a9ae9aa59f3d601f/pyhmmer-0.4.6-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,559   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/41/80/ef4da6ee20a7937f2a3e3c58bf45519a91890feda2461bc18f353ce70fee/pyhmmer-0.4.6-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,559   Found link https://files.pythonhosted.org/packages/bd/5f/6e0db077ed2e1073b9fe7c4b18df5774bb86c2aa27f191713cd3f3aab53c/pyhmmer-0.4.6.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.4.6
2023-10-22T15:27:57,560   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/26/20/dc39dffff630017b87930177ac6c5e7d8621d57feca523d60c631609cb49/pyhmmer-0.4.7-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,560   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/fa/f4/eccba2715b5b099cee52cddda59b3e5f8344071045f7c0c4567d3a3e32d7/pyhmmer-0.4.7-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,560   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f6/fc/d9b9efcc7b21381a3fa0c4b83e083c9d0b406868846054b989d105c301c8/pyhmmer-0.4.7-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,560   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d8/6f/d70ebea12581688dbcf180b983186e3d3a8ad2325cc8691c837276bb3e67/pyhmmer-0.4.7-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,560   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/46/35/0c72fb32b8c75526ca61e74b835254a36a377ca9f7d53f33c607f7fb27a6/pyhmmer-0.4.7-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,561   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a0/c1/9f98c0bc9356578c3c4b14fd45a738acae7f7940a8ddc8342a8632734a3f/pyhmmer-0.4.7-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,561   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2e/1a/9605d23785ef8dbed1109f79c3797d2e417bda20e9207a4c8156609c808c/pyhmmer-0.4.7-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,561   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/46/28/1373677589c6dff86a9c29c5340ce8f17fea4163530ad63d8c2a4a54141f/pyhmmer-0.4.7-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,561   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/20/89/62ec67b2d2c1b17a61c6ac8458eb95c31f28da3c69920fece52325ce6a6f/pyhmmer-0.4.7-pp36-pypy36_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,561   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/bd/1e/dedaa65e0af9d9e0e2e3524fed5730187f0241d75ae14a30c537aa0b06fc/pyhmmer-0.4.7-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,562   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ed/45/d5bc13839408fcd2026afeef68619db2ea343d3a9add651214c37fde69b4/pyhmmer-0.4.7-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,562   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d9/04/036c8ea00e8388dba6b116f4914df1065d7856f786d5c6458a1bd1ec6576/pyhmmer-0.4.7-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,562   Found link https://files.pythonhosted.org/packages/f1/eb/1328eb9c4ca58a684b9b210a51636a5294e6f6019675b0181c8a9c567ea3/pyhmmer-0.4.7.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.4.7
2023-10-22T15:27:57,563   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/53/60/97c5cfc22bf1d26475087e45455641599ca1e2910e670d9c72604508aee2/pyhmmer-0.4.8-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,563   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5c/35/02845b5af76b67f8a7d0703f049793aba99d5323cc05851c7dfd32e59145/pyhmmer-0.4.8-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,563   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d2/5d/bd3895ebf5d0c21e5576e046cb295b3832174b93cdd7affa2c965eb72002/pyhmmer-0.4.8-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,563   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a9/2f/2ffaf5d537ff04d90b69c779d2e4d060630f29b25fbedb95a76e6a0ca195/pyhmmer-0.4.8-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,563   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/87/e9/d607ccdc5e57e8bfdaf1eec1fe51bd434eb57fe61fb80d60236519ee4162/pyhmmer-0.4.8-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,564   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/29/de/6af96c7b795c643e27fdb6518e64c74b7c1c6cdb7624e15c040bce58f9d6/pyhmmer-0.4.8-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,564   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/62/ec/918058530f70ad9b58ec9dc1638115362f59cfb9f5ad584732fe290b8dbb/pyhmmer-0.4.8-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,564   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5b/42/4a8ec9fdb0e57cddff194646e62360e73f6a57a3d339095df6572af0f935/pyhmmer-0.4.8-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,564   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e6/68/8c577f9574bed3ac3017a76bf487b76b80c784163a9ddf15e14db3a84adc/pyhmmer-0.4.8-pp36-pypy36_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,564   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/95/57/b2ed0c64308941872e2535eceeafb737b4871e507d54b5d68b6ffc02f8cd/pyhmmer-0.4.8-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,565   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/40/22/099da301d77a3f512bde56a54fa5272e937818843f8be96aa46089071f4f/pyhmmer-0.4.8-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,565   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/be/76/477e37aee671104bb5d1022eb0ff641ce700d639a36961694ba9710af8b9/pyhmmer-0.4.8-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,566   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/50/0d/6a818b85e852443ac1fa4ede30e18d5d4a4b3c04616f84a48f5cb5d2f664/pyhmmer-0.4.9-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,566   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9a/07/442980e0fc7b4d336157fd80d843b3ad0b71709087b0daf910f2beee93cd/pyhmmer-0.4.9-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,566   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1a/41/f5b4ffcedcf3116573ff5740de4877723f0d69b7527ece4a794069de2235/pyhmmer-0.4.9-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,567   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/78/a6/d21ba62d70e38f7b3829c69be9179cea416599a8ee952c8f4ac5503bfd04/pyhmmer-0.4.9-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,567   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/49/53/6428ce4322f6af35747f3f7c3829ebaeb05bab2eae6d5ff39c46cb1455e2/pyhmmer-0.4.9-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,569   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/05/87/24601e2b81fedba09b3a003fd1e4fe78c8cd252767663acd9dbc63d1784d/pyhmmer-0.4.10-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,570   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cd/6e/9ab04139587efaeeceefb0a5e10178b14c61abdf67a854fc0430b6c8af80/pyhmmer-0.4.10-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,570   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0d/63/e4a944ac648642739f5dd85127803e47939202e025e0a9ca9fccc100eba1/pyhmmer-0.4.10-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,570   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9d/b8/b5c116cef579c924383e595072bfea9c24a894ef916eaecb139cf3e274dc/pyhmmer-0.4.10-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,570   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/33/90/566f66a4ca8bbba8d364b5d123399c5ca76ea8050d829a397d65eabaf3ed/pyhmmer-0.4.10-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,570   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9d/46/ae84e7ae14e9b3e8026b796471844959fbb6f4043c1af329dee1e9f702c5/pyhmmer-0.4.10-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,571   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f1/6d/ef6e6e92eb4925da759c64c881ff811f5ea4073b826b2466fe08a4ef1698/pyhmmer-0.4.10-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,571   Found link https://files.pythonhosted.org/packages/41/d9/e68b956d0a82e66223ad23fd46e15bcfe535809fe2c7fe38dc4f324c066c/pyhmmer-0.4.10.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.4.10
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2023-10-22T15:27:57,572   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/4a/fc/4919fc4e0f15c48c060ef04908af7e4576aff4a5aef06a7fe8876496716e/pyhmmer-0.4.11-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,572   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/76/76/0ae3492a40179ac43d453b37b8a3d19bd58c3ca762013eca94aeb9592873/pyhmmer-0.4.11-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,572   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b4/dd/1f02cbf6cda0a82564cab00b63fba1904fc98be1db7c09e8eb2084b322d6/pyhmmer-0.4.11-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,572   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c0/3d/c2ca1d16803049f2917027ff4b05dc7b635757829f9c7288114edd73516a/pyhmmer-0.4.11-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,572   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/62/30/178be3d6c5dffe69cf886beff8302927e15d5ae2b92e9cef7f2f3fd0f43b/pyhmmer-0.4.11-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,573   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/63/9b/dc1fc0f379310382669aad49b6281cf3703f46662fc8d968b0b9ca0d7e8c/pyhmmer-0.4.11-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,573   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5c/54/4cba0bf00660fb32bc4e76006a76b20eaa4f694f49f37994995c6b0a4e1e/pyhmmer-0.4.11-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,573   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f9/71/f2d8518120e117fdb842d13e7714678c40692bf60bce01e54c883625a1f1/pyhmmer-0.4.11-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,573   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a3/91/02307afd6d26f1423cfd8f46dd4b070a7e4c84ad6d00524e5f86f22e5fab/pyhmmer-0.4.11-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,573   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a0/87/c0e6ce633d6649cae526c23260219fb911e2c3da891eb2485a5b6b8e6cb7/pyhmmer-0.4.11-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,574   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/61/d7/a415042ae43b7a13fbcd1a3295a8b8189029e7baeede92ab82ce597db36e/pyhmmer-0.4.11-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,574   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9f/5f/1fd5587437c9e6331fe7a1d85d11d1e7d71fd21e068d1f0800c30bd2d0ec/pyhmmer-0.4.11-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,575   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/97/5a/9983f2ef20d457d0065c12d96103c9ff25581089fc29478f2d387ede8007/pyhmmer-0.5.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,575   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/18/55/361aa005346f7810a9d2daf9a25eb8bc4cc5352bd8ff0cb9e25caee1c3f4/pyhmmer-0.5.0-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,575   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a9/ab/d4ac37a66e6344b641cc4f5bf6a99f55a9a4f1424a63a214a7862086628e/pyhmmer-0.5.0-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,575   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/27/57/1488737434a2bb61340ad3c0fc732fedef52718dca20931ed2617e66bd07/pyhmmer-0.5.0-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,576   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d3/d4/231efd3e3d8130f57875939fa9cb21160b8edc51f1749eb989673c9921b4/pyhmmer-0.5.0-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,576   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/95/1c/5118252d96ee71ccad56ad081fcff29e7af31ea85b9e94b97911df3db5e3/pyhmmer-0.5.0-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,576   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/fb/15/f3b826ba98bfbc9386e628d9b6fa5237a0e761274a1e84a6e1042fa55784/pyhmmer-0.5.0-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,577   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/66/e6/77a0ac512c431181dcb2ea9d41912a09518dd4514689bcf035a31576e479/pyhmmer-0.5.0-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,577   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b7/8e/3030e8640238fe995a33b34bbcf073e3c37859cb8cddab5badde1c9f698d/pyhmmer-0.5.0-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,577   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f7/37/f35d1b12f6758bcee4c013957c23e7719e1db5795f37bf64e4367b9992b8/pyhmmer-0.5.0-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,581   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/7b/72/119583107572a60f86e0f8578a7bf5d03928eeb3107d3e469336c5c41245/pyhmmer-0.6.0-pp37-pypy37_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,581   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5e/8d/2743d1944b793b1182955de2143776ec786c239e6c69fb8da18fb4db17ed/pyhmmer-0.6.0-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,581   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5b/e5/7dae65e0e3f3724535d49307db46975b4eb1bc62cc77a1b2dd26ddc308a9/pyhmmer-0.6.0-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,581   Found link https://files.pythonhosted.org/packages/66/34/775e5243113c2d97ae0ed9e6a39f145549bf85c6215840b728fa9a3f6b89/pyhmmer-0.6.0.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.6.0
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2023-10-22T15:27:57,582   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/89/73/9dcef15dba0a3d194c2efd78a64478d9fe368745a5f76b4d7c321da3929f/pyhmmer-0.6.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,582   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/79/34/aaa3d15ef7bd33ef7e8eb8a92ac49e975355f708448e88fe4af98909e4fc/pyhmmer-0.6.1-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,582   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/11/2e/dfd760137a8b144e2341a07ca54ce170a83bd4982641ea31ee90fdfd0837/pyhmmer-0.6.1-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,583   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2f/63/7c21fe2dfe3cf76c8696fd612327733e3d985161cf70f255937433c3f6aa/pyhmmer-0.6.1-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,583   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e2/64/f3503102d6a0127a703b6730c8c6512dd0a1b2f4616453194ec3e6552797/pyhmmer-0.6.1-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,583   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/61/46/4fa17c338e3db5820ca0c98ffe41c69dae85eb96372e333504b9d780bd70/pyhmmer-0.6.1-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,584   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/27/82/c9dbdf556c27204f3c7452f3dc6360b3d6a5a7a9d139a6dab992a0a33af6/pyhmmer-0.6.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,584   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/00/ba/e4a5a835581363c1a6809656518b2b5bf2b668d0cc8bba6a91aaab864023/pyhmmer-0.6.1-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,584   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/46/60/bd4cf94201733ee99960638e205d34547e1814a7fb95d2d5fc84df6c6423/pyhmmer-0.6.1-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,584   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c9/53/f6a6fd098e6ac64f2c0060e2e8696e573197898751b42fde2887ab62fe73/pyhmmer-0.6.1-pp37-pypy37_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,584   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a7/09/be194e9996ce5b9b250af009792194de38d5f38537a07b787d77bd7c2020/pyhmmer-0.6.1-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,585   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/7d/6b/d6adf535b346904db4dad94b57101d495fcb2a1ba2b0cb9a2b9b5c11aee4/pyhmmer-0.6.1-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,585   Found link https://files.pythonhosted.org/packages/cd/14/0c156809b9f92d3b0e7af334b0978392f15b2247c4bbb12c16d8f09a05f9/pyhmmer-0.6.1.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.6.1
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2023-10-22T15:27:57,586   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5a/7e/0ae123e0917f504cd5a286eef569469a4da0bdcd9c8dd2472c95b9cd52d0/pyhmmer-0.6.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,586   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a8/f9/72faeef1934a86623f8720070d2bfcd4518492e95d6afedf7cb093f06b9c/pyhmmer-0.6.2-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,586   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/95/f2/bd50114e9224a290b2a68c9651b9e35a950656a6829307a1a4a432fd45be/pyhmmer-0.6.2-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,586   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/74/c9/2ffa4ca300bc0effd026daaca1db9ccd718551439b73f4a792ef57ec38fe/pyhmmer-0.6.2-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,586   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/66/b1/957e1be040cd2b5778941c9a4b8caf283e328dc4608c61b54dc4f44dd677/pyhmmer-0.6.2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,587   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/25/4a/2db5464d2bb8e41bb346060fd9c3ceae2043c60af6621f04c8e49dbecae9/pyhmmer-0.6.2-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,587   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/60/a0/4d7a8f68dc85cd4cf70a39afc592ab67a2e703149887dc78f4d2031a3d1c/pyhmmer-0.6.2-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,587   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2e/b8/a5edf3701cb051f9b8f397cc0ad5312bad4eb6eb761c99ec294b21c922f7/pyhmmer-0.6.2-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,587   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/bb/a1/103087f3aba399a852295b2865a66357570a2c0a5c1c98ae1cce916ab468/pyhmmer-0.6.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,587   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d6/e1/4d9ff4eeaef082868cd75110599e2b123191d2d28570b52f837c7b4e8c31/pyhmmer-0.6.2-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,588   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/7c/ae/0b5f48c0b450b59edc60b80673c1c1d3a476fd0e1a67227c98bc24f5e119/pyhmmer-0.6.2-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,588   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a7/42/f72235b8fff6279f6f597c4766b42e5bf4d5f99b8952aad09262c191cb0d/pyhmmer-0.6.2-pp37-pypy37_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,588   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e8/42/0642f761e61259b3c5263fe33ff1b94fa5db04f416c2bde2b620daca9b59/pyhmmer-0.6.2-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,589   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/47/80/ca9f919c80b20030c3f65ef28bfa53c95453b69e7a24ac429964df65c7d0/pyhmmer-0.6.3-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,592   Found link https://files.pythonhosted.org/packages/97/96/56a83e026412eb4714f313c444393453ef203e4ca1189de2c9907a9654f2/pyhmmer-0.6.3.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.6.3
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2023-10-22T15:27:57,593   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/49/f6/375ea7dec9ec46fe919687f992bf2f8326a7f08449a94b3fa316a02d67de/pyhmmer-0.7.0rc1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,593   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1f/aa/9f76d8281d452ce142cc95cbfaeac15c76b2960949b2f5c9e12695e53cbe/pyhmmer-0.7.0rc1-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,593   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0f/68/dd15664d24aceaef5e94f961bffa45d9095d8f8499d64e78eddddd1ef7a9/pyhmmer-0.7.0rc1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,593   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e5/01/cb2f9126a8cc8a16f12651d80cad00f1c285451ba20ead2b461bb86ff5a7/pyhmmer-0.7.0rc1-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,593   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/7f/16/5269fa02ad5001fe304296e4de68cc3b316981363a07e0f620d034520e33/pyhmmer-0.7.0rc1-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,594   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8f/6c/66722b1c98eb72b6f2264cda1392461ba1a7beefcca6e6d56edb7a58baab/pyhmmer-0.7.0rc1-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,594   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/88/b3/1c509150cabbc5829c99e24bb0d27102407421be6eca4f93696a9e3c6c6c/pyhmmer-0.7.0rc1-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,594   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9d/f3/d93ce4c8096abe40f469514dd94fec0c6c7e7b687f2cdd00c40960b17262/pyhmmer-0.7.0rc1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,594   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5d/b7/2c01ce15f1931c19f141bcc471ae8aec3238ee6b7ff32e62b0c6488dcf5a/pyhmmer-0.7.0rc1-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,594   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ef/dc/176eed80e4ead0ffc4fb150c48e98bba98063ad079df4dac8435448ce05b/pyhmmer-0.7.0rc1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,595   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/25/4d/ae2e1c934c3e4fc67f8869b12b1333cfe908b99299aed8ee7dc8f7eca7a2/pyhmmer-0.7.0rc1-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,595   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b2/97/755b4f2c2b09ad2266fc38914be01645b96d771c6e3351ea9ff82b2e7310/pyhmmer-0.7.0rc1-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,595   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/be/36/dac07936503be8a2b9461b4e55b2434d5d2cc6b2c385a2ffd0c2c80bb347/pyhmmer-0.7.0rc1-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,595   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6b/34/545b15abe131691ba9c0445567481c2a08eb5cb2e82ea81f687ed9ace9b8/pyhmmer-0.7.0rc1-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,595   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/09/2e/a4931aa6ee3a39b72d650c44fef2282256cbae34f401d00e78c95169918e/pyhmmer-0.7.0rc1-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,596   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e7/66/7146d3ffbb6917adcb31600e6b5037ecaafdf2198efaabe8b26519d3aad1/pyhmmer-0.7.0rc1-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,596   Found link https://files.pythonhosted.org/packages/07/f9/aa30f9a062a03215706fd914a193d012c869409f0883406963f5097ec7f1/pyhmmer-0.7.0rc1.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.7.0rc1
2023-10-22T15:27:57,596   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5d/64/27ba87f3a6b5bd028bde8e63579e4fc7729abb207b6e9e700cbf51dc7b30/pyhmmer-0.7.0rc2-cp310-cp310-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,597   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/57/5c/c79dfa8fbd70302047cd5af55d5a5634ddce263c160cf0bbc298817b28a9/pyhmmer-0.7.0rc2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,597   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cb/8d/c56e4948c9a2d712e48ef730fa4a9689625d68fc056bbef60ffc0ddb06f4/pyhmmer-0.7.0rc2-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,597   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/19/9f/c9bd67b4506ea74c87aa2170245f52a7ef31d9ab0091c1f341c6cf76fa9b/pyhmmer-0.7.0rc2-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,597   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8a/03/ee7fbc006cfd40bacc68f90e34ae6c0648eeb66e63f1702c57a595f23beb/pyhmmer-0.7.0rc2-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,598   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/47/f6/b77002e48c526bdb1ec0bee0697ee021f31702ff7618adc1f7c8458638d8/pyhmmer-0.7.0rc2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,598   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c1/56/143d6ec67af6539abafac7d5ed7eda2f7dc4a22dc7ebeeb491a808a923a7/pyhmmer-0.7.0rc2-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,598   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c8/35/66d385727a9178511182bfe841a12d45f7f64425fdfdd9ed0d93e6a74bb8/pyhmmer-0.7.0rc2-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,598   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e4/d8/d5d5bec33f7ef7e4162e43e846cec992055d17864c098a1e55b96a34050f/pyhmmer-0.7.0rc2-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,598   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/39/c0/6a46e969f7c1f77f5cc19011827469176b0569cbee1f2ec80f5865f49ad6/pyhmmer-0.7.0rc2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,599   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1c/92/5602f15a7bbb92b08e92e4636813015754067aa97c0511ea1801852c1e66/pyhmmer-0.7.0rc2-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,599   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5a/ff/ece5bd11cf4cc3ec6f664f0e3a111ad6dcf207d3f6ec2ad96165259a412b/pyhmmer-0.7.0rc2-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,599   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2e/d2/b4d94b6921db1e4c69e9f41bb559d66fe18a2a098cde1e6434706e1eabc6/pyhmmer-0.7.0rc2-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,599   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e1/55/c39dc94317204fd84d5d8bbb6aed951be0706970eb5e3998aa0a4a35f46b/pyhmmer-0.7.0rc2-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,599   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f2/b9/46f7e47792b6dcd5d3330313efceea13105448ae6f6cb13af72cb60427d1/pyhmmer-0.7.0rc2-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,601   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cf/8b/45d7eb18b457d0a36bacee35ad14a52af74c6ad5eab2901492996e9aa4b7/pyhmmer-0.7.0rc3-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,603   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/90/e1/dcccd398039ac13a2a23114fe29ba40a1270c0498b9c7d15dccf098d02db/pyhmmer-0.7.0rc3-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,603   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ab/22/86eaea1f4be5e5dd587f216169ba9f7a445b166b719c4fb364df45cf5eb8/pyhmmer-0.7.0rc3-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,604   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b2/50/e377323457ca4ac99d9a374e5a2d23cefc1007eedd186a1e33a4ed5531fd/pyhmmer-0.7.0rc3-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,604   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5e/99/f426e48fd4c851ff69b0d669d9c7f782c7c8c0a4b753dd93d7dcdc18a91f/pyhmmer-0.7.0rc3-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,604   Found link https://files.pythonhosted.org/packages/cb/78/d51baf5d1a2bd5040c253ca8a847b92f6a361d08ed6e108ae8ff10fae578/pyhmmer-0.7.0rc3.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.7.0rc3
2023-10-22T15:27:57,605   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/70/8c/41e7a4d44918a08c02a8b529d11d45180fc640cf2d21cc83427f0e5cfe06/pyhmmer-0.7.0rc4-cp310-cp310-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,605   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0e/48/b2724ab2e2b17767c9c89ead899fb8e16378228c2c5e7b596861eb8e6c59/pyhmmer-0.7.0rc4-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,605   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/41/05/5e72907607e3cf2d51cee789ad84fbf627d638f4e7c437c0978fc4e3d29b/pyhmmer-0.7.0rc4-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,605   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f1/a3/11d657ea4e443f0ae4f94545f9da7998c043b7d7e8a1757b7d08c30aee5f/pyhmmer-0.7.0rc4-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,605   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f9/2c/3eca6732d620870523194f097bd4648d7a6bd7f85aadc50c0dea34488e4e/pyhmmer-0.7.0rc4-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,606   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a5/f8/6cf5263d5644cf1c80d6bead0aad5b66ca9ec122e2c534f1cbf83dcac95e/pyhmmer-0.7.0rc4-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,606   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e4/df/15cc4cfe21d13fea3111c44ac170b354bd372bd75894b716e6d4ca211ee7/pyhmmer-0.7.0rc4-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,606   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/32/be/325c4598931621a786765a05aa3feda8c618cd7c7441d374844ce56fb0ae/pyhmmer-0.7.0rc4-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,606   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/bd/b9/97c2389cec088ae3cd65d945ccd7fda99140a831b290cc1938708188af48/pyhmmer-0.7.0rc4-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,606   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e8/27/a5f9c4c906b5e2047bfa71709d96c26944508615dbe08f4b2fafd952564f/pyhmmer-0.7.0rc4-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,607   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ab/c0/3ef8ced20ac64ab83d16d855b23540751c1626d1d5b8e8cee4440bcabfb3/pyhmmer-0.7.0rc4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,607   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2a/df/a287f8b111ba8688c5c58e772e6d276fb3c14515249e39a50515160a85d2/pyhmmer-0.7.0rc4-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,607   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/71/e5/96ce896b08d17b9114817c947683e144e760f58bd9f48f53f5436ef25079/pyhmmer-0.7.0rc4-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,607   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5d/a5/aa8fc0a41d66c95b60097ed9aa5d11cd9b1be853c1ffafeca1e42f1095b6/pyhmmer-0.7.0rc4-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,607   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ba/7d/284867ffb3cd7eac7de62716e1dbb495331004766acf8f49419f0d04e103/pyhmmer-0.7.0rc4-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,608   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a9/0f/e0fdfe3a3872753e8205280a83f8bfb09cdd56050bfb84137627c905bdc0/pyhmmer-0.7.0rc4-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,608   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0d/c4/049d1b55164a4593e7d7ef55b6f0364b03a7c863f7f9d6a4730c5995dc20/pyhmmer-0.7.0rc4-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,608   Found link https://files.pythonhosted.org/packages/64/87/65526708ee20e910b253cd36a32d655e4f4ae5efa92817b9d45f6e80a5f5/pyhmmer-0.7.0rc4.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.7.0rc4
2023-10-22T15:27:57,609   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/db/a8/5302df454773f5b6a9dc9c29d540b3195f8d10ea47773bf5ba2fe934c065/pyhmmer-0.7.0-cp310-cp310-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,609   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/3c/74/ee460564fd2c0d9404e75649c4a5e476d962c37b018de89592f7960d1325/pyhmmer-0.7.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,609   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/36/e9/3d4b55e50c0815ec25f18e367982e588bc84033e6b8d5417671210214dc5/pyhmmer-0.7.0-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,609   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/7d/64/775e2adae614da4f3481e035153058f95338913b433d82a2b295e672c753/pyhmmer-0.7.0-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,609   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e5/f9/c669b9adabe8996277e8a2bb6f08568509ea95cadfcb76121150d24b5f93/pyhmmer-0.7.0-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,610   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/4f/54/985dcf1e22569b0904bd17b1f17e713dc94a7ab13b767c9f5d90f54daba1/pyhmmer-0.7.0-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,610   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d7/04/5277c738b8789802cf308662e7eb69535a5dc04d77088937cf749173c7e2/pyhmmer-0.7.0-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,610   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/46/cd/2ae79c367d9ac8df13d62cd7a7c33f8ae37c4b7084886825e616862fc7c3/pyhmmer-0.7.0-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,610   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/12/df/5d0e476aab5fa0fa99313e9f2c1d641690381724e8d691a4fe42b7734b6e/pyhmmer-0.7.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,610   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f7/af/dc4680fa932f2bf899f08438eb08bd271f2602454a0a0a8a2fede8bd2abe/pyhmmer-0.7.0-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,611   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/51/03/a89c205cef3d63d140049a204977c5903adbcc2fffcd37f903a155fa5cc8/pyhmmer-0.7.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,611   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/81/47/eeb9204615d3acf39fe7ba1f5d0209d263c747eac405ea97e3ac6428c7a9/pyhmmer-0.7.0-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,611   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/be/c8/273b776dc57d54b80741592ca6aee62fb31982f4ead0bbc1510a3d89f95e/pyhmmer-0.7.0-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,611   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/dd/15/3005213eddd959f34442df93ebc4e44c28bb223ad9a7fa407ecc8b788e92/pyhmmer-0.7.0-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,612   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9e/17/03f003657c307cd45ab90e60c6ac65a72b895610952fcc41bcbb16c20013/pyhmmer-0.7.0-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,612   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1e/d8/f7b849eb87315778cc9a4295372bb3c5680616558edd48b4cb48a2cc1eb4/pyhmmer-0.7.0-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,612   Found link https://files.pythonhosted.org/packages/b4/aa/5f50a6780689a7372c851c8474fd5487b65d3df53f2a434bc5a99bc01cee/pyhmmer-0.7.0.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.7.0
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2023-10-22T15:27:57,613   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b5/0d/38ef5d23d1a5cb2a9fa802be2e3e5515584db19a9e4b571fd287c7ea3bf5/pyhmmer-0.7.1rc1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,613   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d9/de/81f869083b51909d42e48df30c28685c811f59c21f8ca42a4bc565ede604/pyhmmer-0.7.1rc1-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,613   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/4a/6a/b83eeb054f43e80c0cbe6877314d2a581b51252436da6a0b91fed65482d3/pyhmmer-0.7.1rc1-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,614   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/3a/cb/fcf2cdb81b840f0d81299dad023301851aa18832f2dfd9f35a6b502f4ccd/pyhmmer-0.7.1rc1-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,614   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1e/24/b5fd39220f4a8837de8dd1608eb53b724b123d57901c25517ea6f51f0924/pyhmmer-0.7.1rc1-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,614   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ab/95/0c6493ed1170c5cf11fcfbcbcb0272117d9b7d9c6810604ee0b54d809d19/pyhmmer-0.7.1rc1-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,615   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5a/3c/4417c019a459d64aeb93b5583c5318d5dbbcceca09122c7b2dd70ecfea9f/pyhmmer-0.7.1rc1-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,615   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/21/17/c60036e61557900aacc140b1203dd88269f9f4c74619b1d93338cbb0f3aa/pyhmmer-0.7.1rc1-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,615   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/17/be/1f0953d157c07307f3223edc3f7cb55a2f56965a9f7c864f0bf8e0dbff95/pyhmmer-0.7.1rc1-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,615   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/da/d6/3f260928c49eb449d5917cb1820f54826544cb5d5073591b6595b20926bc/pyhmmer-0.7.1rc1-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,616   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/01/af/43f2bf25a61767df0fac21c668656715d45ce051363d1ee7f897a11baad9/pyhmmer-0.7.1rc1-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,616   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8d/5b/99159669ed9c78d16ad48eb9cfe9125b1de55b89c6896113db6d7db01281/pyhmmer-0.7.1rc1-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,616   Found link https://files.pythonhosted.org/packages/ba/63/dbf48469522286800379be94c0aac9ca387e8b55dd2aa3631d25aa6b3670/pyhmmer-0.7.1rc1.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.7.1rc1
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2023-10-22T15:27:57,617   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c7/1f/314985aa53011a9b7a217f92cba4448c77c535c55b48308def97d4ab40ab/pyhmmer-0.7.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,617   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/95/63/3843021512df961cac8ea24e3796995ea0206a35709bb019adc471c5e115/pyhmmer-0.7.1-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,617   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2b/62/e270b0e792b85332ebbaccf137a9b3c33ff035c4be12ec3760aed67dd5da/pyhmmer-0.7.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,617   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ae/0d/f38735e35b50b639b70c9a74b58ea25614a81b0a188d89b692139001bca0/pyhmmer-0.7.1-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,618   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2e/49/2363ee3fe7995921638cfa8f2df825168c47e0bd05f24374319e6bc8fa5e/pyhmmer-0.7.1-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,618   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9f/b1/88afa91956eb78f5b19f3e44fabef47e0bc8bd2028c33c2f1740a2ddf406/pyhmmer-0.7.1-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,618   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/29/a9/acec031f4435e796440521c54f78f978cf91203615c29b07c7c9697840e7/pyhmmer-0.7.1-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,618   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/65/16/57009ec67d1b33dc1bddfd40c054d0fa2ed0970c357249b81ca9b2c80ac4/pyhmmer-0.7.1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,618   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/65/61/e5d74affedd6c3ff3d2c17e8dd278921194411035ff093dbb17a8f3e4525/pyhmmer-0.7.1-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,619   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/93/f3/b3f6892b4bb54f3e74c255b7e977acb1b0149601197c40d0e388c481897c/pyhmmer-0.7.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,619   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f5/95/fb8f90d881b6253d0ca29b0fd714b2237733721aa108b20272801822d7dc/pyhmmer-0.7.1-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,619   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5e/77/bde94d470ac47242abc0754a02a21311339c2d4fc367631d91a940946ab1/pyhmmer-0.7.1-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,619   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/83/d3/462aea5aca8f8169bee7b77b380d0221bb8b452e07b54967b352fc9383bd/pyhmmer-0.7.1-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,619   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/95/a2/173fe1c90b803e6bfef9190ece6e479552be0f8afdb606e8639d543a35df/pyhmmer-0.7.1-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,619   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/45/64/476e25cf2eb37d76881022a6c42c8da9e06a93b1af51fc596ede5c6d68ce/pyhmmer-0.7.1-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,620   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/22/b0/978fe1e68b3bdcfb1662358de0b11229dcb0af7b04fec6efdabe0270389a/pyhmmer-0.7.1-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,620   Found link https://files.pythonhosted.org/packages/08/b9/653e773ff15145759bf2b8365c88e2f5aad1f30addbb1eddbde05bde02d9/pyhmmer-0.7.1.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.7.1
2023-10-22T15:27:57,620   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/23/3a/5cfa3d249b3b2d9a15efefe9fe084d3cdb02f42a986f923165ed04d0d9c3/pyhmmer-0.7.2-cp310-cp310-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,621   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ee/77/b3e1ed830c69047796d6368d0e4e56280e3962650af7a7aa90fd5fada9fe/pyhmmer-0.7.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,621   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d0/09/566484b8473a0216d855221e6b21b3ed6a7c8ec31bb08966cf5ce6dbe5b7/pyhmmer-0.7.2-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,621   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/53/8f/886997e0b208edbab94576eb4dbfcd56dcac054700f7246a15300098e210/pyhmmer-0.7.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,621   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ab/20/82e0a7504688cabb764417b4d141b0bb96f86632b8e499773e0dd391c9e3/pyhmmer-0.7.2-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,621   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8d/d5/e46bec7d9e8c5e242f7f6c3286f8af3bc2ae4bf9ea42d91e1f8d426b7561/pyhmmer-0.7.2-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,622   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c8/dc/9356b86de2f272c8e0cc4f577c72d3ae4e86727e26491f80cd8dc8063a9a/pyhmmer-0.7.2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,622   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8c/36/5fda154acd4dbde82c5f8ef5d4bb2532707c8b6b1138645673773ac139f8/pyhmmer-0.7.2-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,622   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0e/e2/f830bf6972a294569182d6ea4026af2a902fd6cdd6f06dd0ed62bce231e5/pyhmmer-0.7.2-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,622   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a9/39/0098a2887eb2db25c5cd259dc8635beca3b1aebb18d56b95fad851592223/pyhmmer-0.7.2-cp39-cp39-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,622   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ad/cf/b678ce405273a64b4295f73a3357e988b2bce163862a9730a4b81650c626/pyhmmer-0.7.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,623   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/81/27/44ffc8ed4f96c4c5cc2fef672cfb66c9d84f1f26bc903c812b0b4fa4d673/pyhmmer-0.7.2-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,623   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b5/c6/c57c9f59c6d5c6e177aee95307f863bd058585dd0b0bfca4c34f7f13cd42/pyhmmer-0.7.2-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,623   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/71/db/4f93af5a00686347346a325ac84cae95fe6af81681c3489c83ac27629862/pyhmmer-0.7.2-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,623   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d1/f7/4bbda84916bb53d5427da8950d2c057db73fccdc33c632c941c524cdb53d/pyhmmer-0.7.2-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,623   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/81/03/cad0781ef73c4f4f52937840947c8d49cf2b2cbbd070c44b59e31d263a69/pyhmmer-0.7.2-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,625   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c2/da/81f51877f44a77d141dea4b76937158affd960ef965ebfe0b5c13402a8f9/pyhmmer-0.7.3-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,626   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/62/49/d59f2cc10afaf02538988eae5d76975a0d402a2b641fe161d46a5a3a5b62/pyhmmer-0.7.3-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,626   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/04/8a/c3403218b9a93886aa949854a90b7ccf6beff39c85a0f4f722f31811202b/pyhmmer-0.7.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,626   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a7/33/b93f0ad31578f0c73948c8db6cec68f6af01df5a4df1da0727c9201487dc/pyhmmer-0.7.3-cp39-cp39-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,626   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/be/4f/70cf9da314d59163bd93c4a3cd8a4d0c6caa53937cdd6464c54d6a0268f4/pyhmmer-0.7.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,627   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5b/82/773159b8884f7a385e53499c92514ab66d3acf4f486a476675e2543d4c53/pyhmmer-0.7.3-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,627   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/70/a0/f5001efc6131cccf6e8e8f53026e28aba2e5effb3a04f131ded183390062/pyhmmer-0.7.3-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,627   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/23/1d/3f8ce18fe6ecd457a3692c313ebbc956f3ff2f0264383e4a5ef8073c20e1/pyhmmer-0.7.3-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,627   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9b/58/1a70407899294d0acabfefb2ee95027aef14b03fe0501cc5e0673c3896fa/pyhmmer-0.7.3-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,627   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e2/db/62121a05d99bb99e7f14f0fddb97e82ae2bca48c891dd16d09f99b3eceab/pyhmmer-0.7.3-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,628   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b3/56/a1d60989df6dd057fca1566c4ba98373572236c886241e68e96af82fe92b/pyhmmer-0.7.3-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,628   Found link https://files.pythonhosted.org/packages/63/6c/9ba4ec4440099d30c4821e8740edb2340e6192b934e81057f7921666c1db/pyhmmer-0.7.3.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.7.3
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2023-10-22T15:27:57,629   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f4/fe/23f9ad6e15feb0605df76f7585d681d79675982bf34ce4767f9ad08a79d3/pyhmmer-0.7.4-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,629   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e6/c8/64e1960c86439c6002664077b2c25dd6543d65b0dd204c2e4c064fa0bb6a/pyhmmer-0.7.4-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,629   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/4a/3c/13929dd0c58c62b1513bdfe818969e6f2ec4da023527b38565af60b91b8b/pyhmmer-0.7.4-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,629   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a7/44/2ca763c3a425e922554b8eb10113ceb8c195639c6fccea846da2551cd923/pyhmmer-0.7.4-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,629   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/68/40/7dc955411414cee0db769d602cb2e8d593707786c9572bec05721491c5a9/pyhmmer-0.7.4-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,629   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/56/26/b8f4f0f8c71bf51d30885978636e4281ce8130bf57136d2d048da93ae2a9/pyhmmer-0.7.4-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,630   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/3e/63/5219330ab124df581bc1d23046ff5b43534e606e9bdcf2abfc10a50b62f9/pyhmmer-0.7.4-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,630   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a7/7a/7e3d72b99ff0cede0022113042bc09f911041437a8f80827103b660bcecf/pyhmmer-0.7.4-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,630   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b2/16/e251dd701b9f1d6a63e3cca421108fc6cebb8538a9f6869296c6644a0c2c/pyhmmer-0.7.4-cp39-cp39-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,630   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/52/de/a269128e8891b97841930cd8addac3595dff08c1f90028619f7c73359cc1/pyhmmer-0.7.4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,630   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6e/f6/44c176d316f9becce866f4536f026e433df3939052b5ad922013e324c400/pyhmmer-0.7.4-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,631   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0c/2f/8b471542f68ccfd607cbd8edd5416bb054c454349f72d1ec1aca4546ab64/pyhmmer-0.7.4-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,631   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5f/5b/56febea19382034f45f8efd31e4cc025e88d47fcbf3b8a702e67daca65d2/pyhmmer-0.7.4-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,631   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/3f/4b/b94e77c892e9b6c656e753fe00a2e244dd63ceb1114004d3ab4c66940fc3/pyhmmer-0.7.4-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,631   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/df/9b/9dd24babb7f1ef8a2fc26e39684ecc85193685b14cac93b1ab3821eada03/pyhmmer-0.7.4-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,631   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a0/0f/687049e993619cf051ce153f9f5d195290f9df872a46ef5ed55f168cb073/pyhmmer-0.7.4-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,632   Found link https://files.pythonhosted.org/packages/d4/83/1abac79f144f82424fc1e3959db6fda4d5cedc251d804b0bedbfca9b90b0/pyhmmer-0.7.4.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.7.4
2023-10-22T15:27:57,632   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e0/76/9d254f4f85a2b15718dca73e2091837e359b3b19eb30d47ae15fc236c088/pyhmmer-0.8.0-cp310-cp310-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,632   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/da/4e/6698347f2848bf6e953daee133c6cc27fb7f340a1946815cc9566a3a3539/pyhmmer-0.8.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,633   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e1/72/99abe4102e7994572f8d786abaaa8974352e917a690e888c2becc89f93b6/pyhmmer-0.8.0-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,633   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c4/a6/2560bcdda70fda6cb767272851a84c700ab754bb3193ab4e7a077d10cf3d/pyhmmer-0.8.0-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,633   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/54/80/54e8e341dd4dbe26f6421db55e52a5381403c5a7fdb505b6348dc9661e07/pyhmmer-0.8.0-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,633   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ff/c5/7fd7e8f5418e609b6d6b12c5a24439943d85600a98ca94a248cfcf5aa1dd/pyhmmer-0.8.0-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,633   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9a/d4/0d65fae4b288faaec2eb9cc27db600a01dcf50be1ad4961904340e1b74f6/pyhmmer-0.8.0-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,634   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cc/73/fe5f2fab87655bb9eb30f9b6177b1d4b1593873d12960a5e4fee74d9c9f2/pyhmmer-0.8.0-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,634   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/17/8e/1161db151a5638878ffa1de64d6af0133a3a24400cd02ae6967aef498c4d/pyhmmer-0.8.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,634   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/71/2d/6d020e9303d2422ed199d3181a96117b25366bef87fd4e1d49f964644a72/pyhmmer-0.8.0-cp39-cp39-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,634   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/bb/d6/df65848b5f3c3ea24a7a1a19fee4fd559377953d62e048bec4eba7b68043/pyhmmer-0.8.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,634   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/88/90/0f0af36b0861b542292872bf99696eb852bb2ffdae35e02532b924a91736/pyhmmer-0.8.0-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,635   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e6/29/5a7a4bd1ada554e49d34d8050ae571e5679f80fcae115ae2e4794cfac402/pyhmmer-0.8.0-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,635   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cd/2e/5a9fdfa2fa8e7896954ae2bdceea262ed56668704d442e7b4a8f2cfca534/pyhmmer-0.8.0-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,635   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cd/5e/537eab68a1a757accf9bf36fb86913427225f548bc5b721852024f0c49ab/pyhmmer-0.8.0-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,635   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/74/63/648053f4d3cc6fe8f86473265e709fbdac17700a2618706e2eb83d219716/pyhmmer-0.8.0-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,636   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8c/c5/01ab9a15c9263612433b128d1e65c0ee1f3cb18b9503c8ddcacf38837914/pyhmmer-0.8.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,637   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c9/4f/9013da7fe5689a83b3200fafe885b1bed7832a93160c7f53d4851d5914eb/pyhmmer-0.8.1-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,637   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/28/46/5e13639f2d28bc37119046ddc63b6aa1b2ecc1cd911cd03c6de1bcaa2a13/pyhmmer-0.8.1-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,637   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/75/ed/e314f33388b55a21b4e2ddee8b3df2a38ff806af6428dcba40415b04b997/pyhmmer-0.8.1-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,637   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/36/e0/8f7d67c887b2acbed5d598e1a8a130b627e72eaafa483bc6314061ec8e53/pyhmmer-0.8.1-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,638   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1f/27/350d8e7551a1df76c4a4c21b2194f52f442fd6da03b1a7058c8a3dfe6c38/pyhmmer-0.8.1-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,638   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c2/93/4bc40a01c44326555939dffa0cf4c8124f62a68e6ebb55342b7b8f9d5e70/pyhmmer-0.8.1-cp39-cp39-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,638   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ac/34/f2758c62dc6bab178927c1677f19aabdff0fc663981fdeac3e6d4b75baff/pyhmmer-0.8.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,638   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9a/ea/326a14e08d354de541be7be649f769db590a1f3b536494b0dfe98ceafe60/pyhmmer-0.8.1-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,638   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f7/a5/2ab50f4c09e8d03b588bb8ffc474ba51320af2f54e08a0a8093ab4eb7778/pyhmmer-0.8.1-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,639   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/04/73/14e48a4ec9ebb3988168ba0763e8982bd7f5d6abcf375858883700e00010/pyhmmer-0.8.1-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,639   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d5/30/2299b81eecc97296c8ebddc568823dea1272ae076726fc1d32f4f74a6218/pyhmmer-0.8.1-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,639   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f2/1a/daef14e72d7b7115c814a9fcc2ff6c34cd79b777221d9b374e0452724a03/pyhmmer-0.8.1-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,639   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f6/fe/6568f474e66ade3d023fd9c1a9d3e9c0d612eebb13fd2abbcaa32e0c07d5/pyhmmer-0.8.1-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,640   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8b/7f/11a8225560199c6b92c062668c24691cfdf4d6803930ea51578c0ae0f2c6/pyhmmer-0.8.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,640   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1d/34/b23cdbe9358907f35c6cbf7af8fd223ba982372fa67842540d2a453bb6bb/pyhmmer-0.8.2-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,641   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/35/62/2dd4b543a1be28c87b20c0176c7f6c9793fec2f948c67dc4d9e15e920d74/pyhmmer-0.8.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,641   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0a/b4/d6842c31ab612714e693d13852d0b8e30877583e2c1e4c7a54e5072cf6e3/pyhmmer-0.8.2-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,641   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/38/04/689d911435b871b9f9beeed09997002bd8869a80efb217cd4dc12fa3be0c/pyhmmer-0.8.2-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,641   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5d/f2/5bf9ca5b718e665b613914fa33b5299040268e289c8bd0b0794c5429981d/pyhmmer-0.8.2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,641   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/19/cc/dd603f6c31b90171f2a74e8bc83cd981e3e5c9275035127f32b2e709e0c1/pyhmmer-0.8.2-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,642   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/3b/96/a3db6773bdb59ce89c4b5806de0ea3d37b07c4bf930fab20dbc60873c737/pyhmmer-0.8.2-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,642   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/48/aa/173348482e94cb75d7ca8140cb644583294a51c947263b075ae98d7d451c/pyhmmer-0.8.2-cp39-cp39-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,642   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/db/d7/8cbf5c5a3b14fa0ffcbf08c862f2f9e2ac6753be228af04e8feaf724b4da/pyhmmer-0.8.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,642   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1a/ee/d6c8985da391696aaa09eb694172201c1eead5f366a8e61790c735c525e9/pyhmmer-0.8.2-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,642   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/47/d9/4e2212224e53a8b9373c0831a3c16d115dce9c6e2c847c867a1f1b8284fd/pyhmmer-0.8.2-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,643   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c0/f4/28ed40514d1f483669b4f80de51a7c1770ebd84255890ea468f641ef17c4/pyhmmer-0.8.2-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,643   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/7f/64/845f17d9680d7703d8deaa729141dd33da734b9602cebc224a7533c0f239/pyhmmer-0.8.2-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,643   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f6/7c/17274676ff47462404c50fd7d03eb2793ab33d0405fb8830c674f29cd7e0/pyhmmer-0.8.2-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,643   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/81/6d/1fd4669db2d3a14e80bdb59377b0a537b26fb98798cbce9a4ccc2943d5b1/pyhmmer-0.8.2-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,644   Found link https://files.pythonhosted.org/packages/f1/c9/c047535dbe805d92a3d6fb8b602f19728c4c91d897a4da2f8d46f5f83cc6/pyhmmer-0.8.2.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.8.2
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2023-10-22T15:27:57,644   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/01/8f/cd5c956a65373f873d4bcebd59546abf2103f3845b81da10d7897a9cfddc/pyhmmer-0.9.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,644   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/02/99/8e05a5b9a8664b7cf8a2c59f0b7f05ada19b30354fafcf0a240bff65fd79/pyhmmer-0.9.0-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,645   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ec/3c/64df043166c02805c895acd8b1843d5a0d4f76ef923600cb4043441daa59/pyhmmer-0.9.0-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,645   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/30/13/127d07fb43f4b3b2889d73a77c0181a92a278ea6aefce0f8eb0811e73c15/pyhmmer-0.9.0-cp37-cp37m-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,645   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5f/aa/914bfceac46ff2285edbb90bd21e9cfd87440cc01832d83c788c079f87f1/pyhmmer-0.9.0-cp38-cp38-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,646   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0f/14/50cdde7eaae89d46288e2000cfbf79c84f882a7671cf5d7b3a7f9b3a425c/pyhmmer-0.9.0-cp39-cp39-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,647   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/47/e3/e830f6d54ae9dd2e07c6e399d18f335749bda3e2eb608682494a447c8988/pyhmmer-0.9.0-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,651   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b3/e0/61f95ef5e5ad45640c867726515d8c8e9ce17dd77282d278754fc016f032/pyhmmer-0.10.0-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,653   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1d/b1/787f5bd85324529f3116daab59e36f76b8bf0162645881cf8b6b16c95d10/pyhmmer-0.10.0-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,654   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/43/b5/8372c730e4acddd8124e905723ce50964c92326f8410c46d6a6890d7df34/pyhmmer-0.10.0-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,659   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/55/1b/163e73faa37158549bf83aa67245475c6f81f18b95c5b1396c78015f66c5/pyhmmer-0.10.1-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,660   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ec/54/36c70e77e6413e19ad6d05970b487b0c0a0ebf1a4d8490faad6be41ac854/pyhmmer-0.10.1-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,660   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e8/c3/e0edff10b341aac101ef983908d2f8bb869c9be676679ea8f59815882bac/pyhmmer-0.10.1-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,661   Found link https://files.pythonhosted.org/packages/95/c6/12ae4d6960a04324826ca90ee7b6d880572e3591d5de09f2f68ba019fa17/pyhmmer-0.10.1.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.10.1
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2023-10-22T15:27:57,662   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0f/e4/459d0124030c15a82159194edb62f5f6a010b10032235e3ffee709baa1fc/pyhmmer-0.10.2-cp311-cp311-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,662   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5a/87/b36fa0648ded05391f83634af6213c14ff17f939a0771a6dfd83782c8eb2/pyhmmer-0.10.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,663   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d5/1e/662c9f9261b81cd19c79536f5e5a9cde1ccc44e084b831b5924ecd06da4b/pyhmmer-0.10.2-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,663   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/14/c2/fd23b275a58eb1c78715d35c91d99299ed5cca478ccea797fc225ec2d13f/pyhmmer-0.10.2-cp36-cp36m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,663   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e3/c4/075f1471df9a308e71eb47d9b67eb906765cfc31613de910fd5a7729f6fc/pyhmmer-0.10.2-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,663   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9c/ac/e52c9389b4c55232e21c2a780dff1b7f015d55e44f52b20cf9c3750af94f/pyhmmer-0.10.2-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,663   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/57/4c/cd94d4d44ac7bcaa0441c43b497a12e245bc193bdd7e147c1052cd41f72e/pyhmmer-0.10.2-cp37-cp37m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,663   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/da/0c/c9f8d62fe5bda81f38b0c72d84086b40be4b0a136a40add396a0973392d0/pyhmmer-0.10.2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,664   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ed/b9/d79db5cf812844b04d98038e6810d093280a46a1f77e75499110374b2923/pyhmmer-0.10.2-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,664   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9b/e2/3a3a4592324e1a19b8cdecf975205d4349d59a4bf46919cb088ee289ac40/pyhmmer-0.10.2-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,664   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/76/e2/4dee973513424feec48066ef207ae699509f234e0399c6a7cf706fa41245/pyhmmer-0.10.2-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,665   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/fa/5f/076e18530a98a4794d72f061f09aeec598a29fc265316e99d62f0d1f604e/pyhmmer-0.10.2-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,665   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/36/25/6915d1f146edf0ff74781d3bb8c1647cb94985028a6748cf24f46715a89e/pyhmmer-0.10.2-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,665   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/24/da/62855a8422e98a83d3c1dbc04413826424e8e423f91265260fa56020f5b7/pyhmmer-0.10.2-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,666   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/47/a3/7f05801ed46cbcf805ae42a2a55d98b64fdd8295ebacbcbb3b1a7c8d35db/pyhmmer-0.10.2-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,666   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/83/a9/b9749543dd1845839f3aa1cacac9ff19eac8636c7c8411242631afa1d5f6/pyhmmer-0.10.2-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,666   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/43/63/073760d0690bddaf5503fa4da4fd2584572b316553f7933ac5aaf5c3ddf5/pyhmmer-0.10.2-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-10-22T15:27:57,670   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/dc/fd/d396b227d97583d0907be13e38996d59c6e201273a5a8e59dcf26792ef44/pyhmmer-0.10.3-cp36-cp36m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,670   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/61/ec/b9970ac5fb5a8107ec0ff2b1f26967a9f38a619644b2d4d1f55d09594be6/pyhmmer-0.10.3-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,670   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a6/a2/3d77d36f78245b10175df5b33d4b1d37193dbbb98cf8e7ecc87d35c232a1/pyhmmer-0.10.3-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,671   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/94/65/e16e47a9bd69a6064172dc6d4297fe893dd062ae9a405a6a912b1f9500f1/pyhmmer-0.10.3-cp37-cp37m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,671   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/49/be/cc28eee47deca0e42809024092b8166160b592d3a1c3e2047845ef750ad4/pyhmmer-0.10.3-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,671   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6c/55/509cc9eee61d9b081347489ba5989134b51e4d3b572b5ac98d4874100928/pyhmmer-0.10.3-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,671   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b9/2f/474e98ad103b5df87bcbb02cd0197b40526053030ad81dc945678e5f2662/pyhmmer-0.10.3-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,671   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/55/8a/297998af3106823ae51b80a4775bb2da00f40d9218d416c758bfe25fcc23/pyhmmer-0.10.3-cp38-cp38-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,671   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/06/e7/2e9c37e221655241dbf29c3c9efc5062de2fea8d7b2e133839ef65a57540/pyhmmer-0.10.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,672   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d2/07/2df2c12929b741102ff50f05ac5ae4470ff36b7d142f9107820e2b9a96fa/pyhmmer-0.10.3-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,672   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/03/de/56efb8c0397dc57ef895ea7c02926bd52edeb17a2c9941a64f0aae822ebb/pyhmmer-0.10.3-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,672   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5a/a7/e3dbd35c934d5f0cc4d951cef4bc602cdd60c68ae9acb5d370123f98f06c/pyhmmer-0.10.3-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,672   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ec/47/ea515d92e2a3ff4f0b30b811374670af18f5c31a533e1a0152b2bb18f2ad/pyhmmer-0.10.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,672   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/73/da/46bb8ae6e94a0137f4811c2ca9dd8e98873c3b2ff45987e694a9ce56f6db/pyhmmer-0.10.3-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,673   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f4/10/f9cfdcdab0c8e558d12ca5538a529feb94fd84d4f49901ff2a34058e1257/pyhmmer-0.10.3-pp37-pypy37_pp73-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,673   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/51/0f/bcabc95f2d8610a874efd5682bd2c0beeae94f32b56ba61ce6aff84dd732/pyhmmer-0.10.3-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,673   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f0/79/7b10875f3d8b19091bd539c8c55d9ec2141b9d5a32e68e34911d71a65c4a/pyhmmer-0.10.3-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,673   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/4d/eb/d3797944a040927ea33d75f42cf8f2a88d85351c8cebdc1b276865456778/pyhmmer-0.10.3-pp38-pypy38_pp73-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,673   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c0/b8/53ff2ce13b4ec50f3d4e2bbc58a146aeac2ea16941eece5bd7d2191e8c07/pyhmmer-0.10.3-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,674   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0a/cc/c4f857cb6337eeb61def8264147637b3a60c12d9c1514fc5b8326d680a66/pyhmmer-0.10.3-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,674   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6d/79/0a0836573fa481bd0c611b2a05203ccf999046ed91441189b26d0390595c/pyhmmer-0.10.3-pp39-pypy39_pp73-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,674   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/fb/1d/e14a5d828378f9ada935608e47836a2b58c08d5f52dc92a1fac3da135c0d/pyhmmer-0.10.3-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,675   Found link https://files.pythonhosted.org/packages/ff/a7/21a20c1297f7d6975092aa13024cf349f44c83b266ad4965e4e34cbc8166/pyhmmer-0.10.3.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.10.3
2023-10-22T15:27:57,675 Fetching project page and analyzing links: https://www.piwheels.org/simple/pyhmmer/
2023-10-22T15:27:57,675 Getting page https://www.piwheels.org/simple/pyhmmer/
2023-10-22T15:27:57,676 Found index url https://www.piwheels.org/simple/
2023-10-22T15:27:57,739 Fetched page https://www.piwheels.org/simple/pyhmmer/ as text/html
2023-10-22T15:27:57,746   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.3-cp37-cp37m-linux_armv7l.whl#sha256=83efaf8033673d2132fd21661c812feabbf20c97964ecc102eeeffe22d163da5 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,746   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.3-cp37-cp37m-linux_armv6l.whl#sha256=83efaf8033673d2132fd21661c812feabbf20c97964ecc102eeeffe22d163da5 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,746   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.3-cp311-cp311-linux_armv7l.whl#sha256=b9211b42cab8b22f0db51d215afc34ee1dc797a653ca5862d538c9f28819f3a6 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,747   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.3-cp311-cp311-linux_armv6l.whl#sha256=b9211b42cab8b22f0db51d215afc34ee1dc797a653ca5862d538c9f28819f3a6 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,747   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.2-cp311-cp311-linux_armv7l.whl#sha256=d6c200cdc4dc44ba61ccf8cc8776efc2824df2e7f6752b5d3ea0112ef9ef3580 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,747   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.2-cp311-cp311-linux_armv6l.whl#sha256=d6c200cdc4dc44ba61ccf8cc8776efc2824df2e7f6752b5d3ea0112ef9ef3580 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,747   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.2-cp39-cp39-linux_armv7l.whl#sha256=5b5677b3de58a0cf905f4362f89271ca9ffe6d827c6566a31d43fb1f9954d89b (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,747   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.2-cp39-cp39-linux_armv6l.whl#sha256=5b5677b3de58a0cf905f4362f89271ca9ffe6d827c6566a31d43fb1f9954d89b (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,748   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.2-cp37-cp37m-linux_armv7l.whl#sha256=fc130f57db7a3d251396d47c0b65f851a8649efe849c1b5fe6edf1d7584fe510 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,748   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.2-cp37-cp37m-linux_armv6l.whl#sha256=fc130f57db7a3d251396d47c0b65f851a8649efe849c1b5fe6edf1d7584fe510 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,748   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.1-cp311-cp311-linux_armv7l.whl#sha256=21f20a59454f3af348f77dfae127be4dc4659d89fb2a5b8d215d0800401baab9 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,748   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.1-cp311-cp311-linux_armv6l.whl#sha256=21f20a59454f3af348f77dfae127be4dc4659d89fb2a5b8d215d0800401baab9 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,748   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.1-cp39-cp39-linux_armv7l.whl#sha256=080392c3128396a3e3807316deb771622a30cfd15912daa4618ccc307f573060 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,749   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.1-cp39-cp39-linux_armv6l.whl#sha256=080392c3128396a3e3807316deb771622a30cfd15912daa4618ccc307f573060 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,749   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.1-cp37-cp37m-linux_armv7l.whl#sha256=f16771752520e098668f0a316f854c36ed2b95b151235a95bda0c510b2925627 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,749   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.1-cp37-cp37m-linux_armv6l.whl#sha256=f16771752520e098668f0a316f854c36ed2b95b151235a95bda0c510b2925627 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,749   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.0-cp311-cp311-linux_armv7l.whl#sha256=3edd051ab8fc4d4193e94ec5c7ed0aa67ab70b021d3941112113fed2e5b9d771 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,749   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.0-cp311-cp311-linux_armv6l.whl#sha256=3edd051ab8fc4d4193e94ec5c7ed0aa67ab70b021d3941112113fed2e5b9d771 (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,750   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.0-cp39-cp39-linux_armv7l.whl#sha256=bc599f2682ac5c067c98071ddc2b813b7f322ee725995f783a9fa338baf42fca (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,750   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.0-cp39-cp39-linux_armv6l.whl#sha256=bc599f2682ac5c067c98071ddc2b813b7f322ee725995f783a9fa338baf42fca (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,750   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.0-cp37-cp37m-linux_armv7l.whl#sha256=d3dccbcc605d6187a81a48ed89b005185e14e946e16b01cc495a93a4a4e4893d (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,750   Skipping link: No binaries permitted for pyhmmer: https://www.piwheels.org/simple/pyhmmer/pyhmmer-0.10.0-cp37-cp37m-linux_armv6l.whl#sha256=d3dccbcc605d6187a81a48ed89b005185e14e946e16b01cc495a93a4a4e4893d (from https://www.piwheels.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-10-22T15:27:57,751 Skipping link: not a file: https://www.piwheels.org/simple/pyhmmer/
2023-10-22T15:27:57,751 Skipping link: not a file: https://pypi.org/simple/pyhmmer/
2023-10-22T15:27:57,774 Given no hashes to check 1 links for project 'pyhmmer': discarding no candidates
2023-10-22T15:27:57,791 Collecting pyhmmer==0.10.3
2023-10-22T15:27:57,794   Created temporary directory: /tmp/pip-unpack-6kw38ddx
2023-10-22T15:27:57,841   Downloading pyhmmer-0.10.3.tar.gz (11.1 MB)
2023-10-22T15:28:02,356   Added pyhmmer==0.10.3 from https://files.pythonhosted.org/packages/ff/a7/21a20c1297f7d6975092aa13024cf349f44c83b266ad4965e4e34cbc8166/pyhmmer-0.10.3.tar.gz to build tracker '/tmp/pip-build-tracker-m4n8uq9p'
2023-10-22T15:28:02,360   Created temporary directory: /tmp/pip-build-env-7q49dd8s
2023-10-22T15:28:02,370   Installing build dependencies: started
2023-10-22T15:28:02,371   Running command pip subprocess to install build dependencies
2023-10-22T15:28:03,554   Using pip 23.2.1 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9)
2023-10-22T15:28:04,087   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-10-22T15:28:05,681   Collecting setuptools>=46.4
2023-10-22T15:28:05,748     Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.2.2-py3-none-any.whl (807 kB)
2023-10-22T15:28:07,448   Collecting cython~=3.0
2023-10-22T15:28:08,278     Using cached https://www.piwheels.org/simple/cython/Cython-3.0.4-cp39-cp39-linux_armv7l.whl (10.7 MB)
2023-10-22T15:28:10,463   Installing collected packages: setuptools, cython
2023-10-22T15:28:16,596     Creating /tmp/pip-build-env-7q49dd8s/overlay/bin
2023-10-22T15:28:16,598     changing mode of /tmp/pip-build-env-7q49dd8s/overlay/bin/cygdb to 755
2023-10-22T15:28:16,600     changing mode of /tmp/pip-build-env-7q49dd8s/overlay/bin/cython to 755
2023-10-22T15:28:16,603     changing mode of /tmp/pip-build-env-7q49dd8s/overlay/bin/cythonize to 755
2023-10-22T15:28:16,623   Successfully installed cython-3.0.4 setuptools-68.2.2

2023-10-22T15:28:16,820   [notice] A new release of pip is available: 23.2.1 -> 23.3
2023-10-22T15:28:16,820   [notice] To update, run: python3 -m pip install --upgrade pip
2023-10-22T15:28:17,159   Installing build dependencies: finished with status 'done'
2023-10-22T15:28:17,165   Getting requirements to build wheel: started
2023-10-22T15:28:17,166   Running command Getting requirements to build wheel
2023-10-22T15:28:18,080   Getting requirements to build wheel: finished with status 'done'
2023-10-22T15:28:18,095   Installing backend dependencies: started
2023-10-22T15:28:18,096   Running command pip subprocess to install backend dependencies
2023-10-22T15:28:19,255   Using pip 23.2.1 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9)
2023-10-22T15:28:19,792   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-10-22T15:28:20,137   Collecting wheel
2023-10-22T15:28:20,156     Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB)
2023-10-22T15:28:21,755   Installing collected packages: wheel
2023-10-22T15:28:21,983     Creating /tmp/pip-build-env-7q49dd8s/normal/bin
2023-10-22T15:28:21,985     changing mode of /tmp/pip-build-env-7q49dd8s/normal/bin/wheel to 755
2023-10-22T15:28:21,999   Successfully installed wheel-0.41.2

2023-10-22T15:28:22,192   [notice] A new release of pip is available: 23.2.1 -> 23.3
2023-10-22T15:28:22,192   [notice] To update, run: python3 -m pip install --upgrade pip
2023-10-22T15:28:22,409   Installing backend dependencies: finished with status 'done'
2023-10-22T15:28:22,411   Created temporary directory: /tmp/pip-modern-metadata-hgodq7ql
2023-10-22T15:28:22,416   Preparing metadata (pyproject.toml): started
2023-10-22T15:28:22,417   Running command Preparing metadata (pyproject.toml)
2023-10-22T15:28:23,232   running dist_info
2023-10-22T15:28:23,245   creating /tmp/pip-modern-metadata-hgodq7ql/pyhmmer.egg-info
2023-10-22T15:28:23,250   writing /tmp/pip-modern-metadata-hgodq7ql/pyhmmer.egg-info/PKG-INFO
2023-10-22T15:28:23,255   writing dependency_links to /tmp/pip-modern-metadata-hgodq7ql/pyhmmer.egg-info/dependency_links.txt
2023-10-22T15:28:23,257   writing requirements to /tmp/pip-modern-metadata-hgodq7ql/pyhmmer.egg-info/requires.txt
2023-10-22T15:28:23,258   writing top-level names to /tmp/pip-modern-metadata-hgodq7ql/pyhmmer.egg-info/top_level.txt
2023-10-22T15:28:23,259   writing manifest file '/tmp/pip-modern-metadata-hgodq7ql/pyhmmer.egg-info/SOURCES.txt'
2023-10-22T15:28:23,294   reading manifest file '/tmp/pip-modern-metadata-hgodq7ql/pyhmmer.egg-info/SOURCES.txt'
2023-10-22T15:28:23,296   reading manifest template 'MANIFEST.in'
2023-10-22T15:28:23,865   warning: no previously-included files matching '*.ai' found under directory 'vendor/hmmer'
2023-10-22T15:28:23,867   warning: no previously-included files matching '*.pl' found under directory 'vendor'
2023-10-22T15:28:23,868   no previously-included directories found matching 'vendor/easel/demotic'
2023-10-22T15:28:23,869   no previously-included directories found matching 'vendor/easel/documentation'
2023-10-22T15:28:23,871   no previously-included directories found matching 'vendor/easel/esl_msa_testfiles'
2023-10-22T15:28:23,872   no previously-included directories found matching 'vendor/easel/miniapps'
2023-10-22T15:28:23,874   no previously-included directories found matching 'vendor/easel/testsuite'
2023-10-22T15:28:23,875   no previously-included directories found matching 'vendor/hmmer/autobuild'
2023-10-22T15:28:23,876   no previously-included directories found matching 'vendor/hmmer/documentation'
2023-10-22T15:28:23,878   no previously-included directories found matching 'vendor/hmmer/contrib'
2023-10-22T15:28:23,879   no previously-included directories found matching 'vendor/hmmer/profmark'
2023-10-22T15:28:23,880   no previously-included directories found matching 'vendor/hmmer/testsuite'
2023-10-22T15:28:23,882   no previously-included directories found matching 'vendor/hmmer/test-speed'
2023-10-22T15:28:23,883   no previously-included directories found matching 'vendor/hmmer/tutorial'
2023-10-22T15:28:23,883   adding license file 'COPYING'
2023-10-22T15:28:23,912   writing manifest file '/tmp/pip-modern-metadata-hgodq7ql/pyhmmer.egg-info/SOURCES.txt'
2023-10-22T15:28:23,914   creating '/tmp/pip-modern-metadata-hgodq7ql/pyhmmer-0.10.3.dist-info'
2023-10-22T15:28:24,086   Preparing metadata (pyproject.toml): finished with status 'done'
2023-10-22T15:28:24,094   Source in /tmp/pip-wheel-d82tfrzg/pyhmmer_fbc32e4d68984d8abeda4e36e31a8b14 has version 0.10.3, which satisfies requirement pyhmmer==0.10.3 from https://files.pythonhosted.org/packages/ff/a7/21a20c1297f7d6975092aa13024cf349f44c83b266ad4965e4e34cbc8166/pyhmmer-0.10.3.tar.gz
2023-10-22T15:28:24,095   Removed pyhmmer==0.10.3 from https://files.pythonhosted.org/packages/ff/a7/21a20c1297f7d6975092aa13024cf349f44c83b266ad4965e4e34cbc8166/pyhmmer-0.10.3.tar.gz from build tracker '/tmp/pip-build-tracker-m4n8uq9p'
2023-10-22T15:28:24,102 Created temporary directory: /tmp/pip-unpack-9xa86mtr
2023-10-22T15:28:24,103 Created temporary directory: /tmp/pip-unpack-oe2ywg9_
2023-10-22T15:28:24,107 Building wheels for collected packages: pyhmmer
2023-10-22T15:28:24,112   Created temporary directory: /tmp/pip-wheel-7qos5xff
2023-10-22T15:28:24,112   Destination directory: /tmp/pip-wheel-7qos5xff
2023-10-22T15:28:24,114   Building wheel for pyhmmer (pyproject.toml): started
2023-10-22T15:28:24,115   Running command Building wheel for pyhmmer (pyproject.toml)
2023-10-22T15:28:24,970   running bdist_wheel
2023-10-22T15:28:24,997   running build
2023-10-22T15:28:24,997   running build_py
2023-10-22T15:28:25,005   creating build
2023-10-22T15:28:25,006   creating build/lib.linux-armv7l-cpython-39
2023-10-22T15:28:25,006   creating build/lib.linux-armv7l-cpython-39/pyhmmer
2023-10-22T15:28:25,008   copying pyhmmer/utils.py -> build/lib.linux-armv7l-cpython-39/pyhmmer
2023-10-22T15:28:25,009   copying pyhmmer/__init__.py -> build/lib.linux-armv7l-cpython-39/pyhmmer
2023-10-22T15:28:25,011   copying pyhmmer/hmmer.py -> build/lib.linux-armv7l-cpython-39/pyhmmer
2023-10-22T15:28:25,015   creating build/lib.linux-armv7l-cpython-39/pyhmmer/tests
2023-10-22T15:28:25,015   copying pyhmmer/tests/utils.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests
2023-10-22T15:28:25,017   copying pyhmmer/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests
2023-10-22T15:28:25,019   copying pyhmmer/tests/test_errors.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests
2023-10-22T15:28:25,020   copying pyhmmer/tests/test_doctest.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests
2023-10-22T15:28:25,022   copying pyhmmer/tests/test_hmmer.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests
2023-10-22T15:28:25,026   creating build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_easel
2023-10-22T15:28:25,027   copying pyhmmer/tests/test_easel/test_sequence.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_easel
2023-10-22T15:28:25,029   copying pyhmmer/tests/test_easel/test_bitfield.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_easel
2023-10-22T15:28:25,031   copying pyhmmer/tests/test_easel/test_alphabet.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_easel
2023-10-22T15:28:25,032   copying pyhmmer/tests/test_easel/test_ssi.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_easel
2023-10-22T15:28:25,034   copying pyhmmer/tests/test_easel/test_randomness.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_easel
2023-10-22T15:28:25,036   copying pyhmmer/tests/test_easel/test_keyhash.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_easel
2023-10-22T15:28:25,037   copying pyhmmer/tests/test_easel/__init__.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_easel
2023-10-22T15:28:25,039   copying pyhmmer/tests/test_easel/test_vector.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_easel
2023-10-22T15:28:25,041   copying pyhmmer/tests/test_easel/test_gencode.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_easel
2023-10-22T15:28:25,043   copying pyhmmer/tests/test_easel/test_msa.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_easel
2023-10-22T15:28:25,045   copying pyhmmer/tests/test_easel/test_block.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_easel
2023-10-22T15:28:25,047   copying pyhmmer/tests/test_easel/test_matrix.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_easel
2023-10-22T15:28:25,049   copying pyhmmer/tests/test_easel/test_sequencefile.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_easel
2023-10-22T15:28:25,052   copying pyhmmer/tests/test_easel/test_msafile.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_easel
2023-10-22T15:28:25,055   creating build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_plan7
2023-10-22T15:28:25,056   copying pyhmmer/tests/test_plan7/test_background.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_plan7
2023-10-22T15:28:25,057   copying pyhmmer/tests/test_plan7/test_pipeline.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_plan7
2023-10-22T15:28:25,060   copying pyhmmer/tests/test_plan7/test_tophits.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_plan7
2023-10-22T15:28:25,062   copying pyhmmer/tests/test_plan7/test_hmmfile.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_plan7
2023-10-22T15:28:25,064   copying pyhmmer/tests/test_plan7/test_hit.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_plan7
2023-10-22T15:28:25,066   copying pyhmmer/tests/test_plan7/test_tracealigner.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_plan7
2023-10-22T15:28:25,068   copying pyhmmer/tests/test_plan7/test_optimizedprofile.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_plan7
2023-10-22T15:28:25,070   copying pyhmmer/tests/test_plan7/__init__.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_plan7
2023-10-22T15:28:25,071   copying pyhmmer/tests/test_plan7/test_profile.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_plan7
2023-10-22T15:28:25,073   copying pyhmmer/tests/test_plan7/test_builder.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_plan7
2023-10-22T15:28:25,075   copying pyhmmer/tests/test_plan7/test_traces.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_plan7
2023-10-22T15:28:25,077   copying pyhmmer/tests/test_plan7/test_block.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_plan7
2023-10-22T15:28:25,079   copying pyhmmer/tests/test_plan7/test_hmm.py -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_plan7
2023-10-22T15:28:25,081   running egg_info
2023-10-22T15:28:25,085   writing pyhmmer.egg-info/PKG-INFO
2023-10-22T15:28:25,089   writing dependency_links to pyhmmer.egg-info/dependency_links.txt
2023-10-22T15:28:25,091   writing requirements to pyhmmer.egg-info/requires.txt
2023-10-22T15:28:25,093   writing top-level names to pyhmmer.egg-info/top_level.txt
2023-10-22T15:28:25,110   reading manifest file 'pyhmmer.egg-info/SOURCES.txt'
2023-10-22T15:28:25,128   reading manifest template 'MANIFEST.in'
2023-10-22T15:28:25,686   warning: no previously-included files matching '*.ai' found under directory 'vendor/hmmer'
2023-10-22T15:28:25,689   warning: no previously-included files matching '*.pl' found under directory 'vendor'
2023-10-22T15:28:25,691   no previously-included directories found matching 'vendor/easel/demotic'
2023-10-22T15:28:25,693   no previously-included directories found matching 'vendor/easel/documentation'
2023-10-22T15:28:25,695   no previously-included directories found matching 'vendor/easel/esl_msa_testfiles'
2023-10-22T15:28:25,697   no previously-included directories found matching 'vendor/easel/miniapps'
2023-10-22T15:28:25,699   no previously-included directories found matching 'vendor/easel/testsuite'
2023-10-22T15:28:25,701   no previously-included directories found matching 'vendor/hmmer/autobuild'
2023-10-22T15:28:25,703   no previously-included directories found matching 'vendor/hmmer/documentation'
2023-10-22T15:28:25,705   no previously-included directories found matching 'vendor/hmmer/contrib'
2023-10-22T15:28:25,707   no previously-included directories found matching 'vendor/hmmer/profmark'
2023-10-22T15:28:25,709   no previously-included directories found matching 'vendor/hmmer/testsuite'
2023-10-22T15:28:25,711   no previously-included directories found matching 'vendor/hmmer/test-speed'
2023-10-22T15:28:25,713   no previously-included directories found matching 'vendor/hmmer/tutorial'
2023-10-22T15:28:25,713   adding license file 'COPYING'
2023-10-22T15:28:25,751   writing manifest file 'pyhmmer.egg-info/SOURCES.txt'
2023-10-22T15:28:25,758   /tmp/pip-build-env-7q49dd8s/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'pyhmmer.fileobj' is absent from the `packages` configuration.
2023-10-22T15:28:25,758   !!

2023-10-22T15:28:25,759           ********************************************************************************
2023-10-22T15:28:25,759           ############################
2023-10-22T15:28:25,759           # Package would be ignored #
2023-10-22T15:28:25,759           ############################
2023-10-22T15:28:25,759           Python recognizes 'pyhmmer.fileobj' as an importable package[^1],
2023-10-22T15:28:25,759           but it is absent from setuptools' `packages` configuration.

2023-10-22T15:28:25,760           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-22T15:28:25,760           package, please make sure that 'pyhmmer.fileobj' is explicitly added
2023-10-22T15:28:25,760           to the `packages` configuration field.

2023-10-22T15:28:25,760           Alternatively, you can also rely on setuptools' discovery methods
2023-10-22T15:28:25,760           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-22T15:28:25,760           instead of `find_packages(...)`/`find:`).

2023-10-22T15:28:25,761           You can read more about "package discovery" on setuptools documentation page:

2023-10-22T15:28:25,761           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-22T15:28:25,761           If you don't want 'pyhmmer.fileobj' to be distributed and are
2023-10-22T15:28:25,761           already explicitly excluding 'pyhmmer.fileobj' via
2023-10-22T15:28:25,761           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-22T15:28:25,761           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-22T15:28:25,762           combination with a more fine grained `package-data` configuration.

2023-10-22T15:28:25,762           You can read more about "package data files" on setuptools documentation page:

2023-10-22T15:28:25,762           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-22T15:28:25,762           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-22T15:28:25,762                 even if it does not contain any `.py` files.
2023-10-22T15:28:25,763                 On the other hand, currently there is no concept of package data
2023-10-22T15:28:25,763                 directory, all directories are treated like packages.
2023-10-22T15:28:25,763           ********************************************************************************

2023-10-22T15:28:25,763   !!
2023-10-22T15:28:25,763     check.warn(importable)
2023-10-22T15:28:25,763   /tmp/pip-build-env-7q49dd8s/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'pyhmmer.reexports' is absent from the `packages` configuration.
2023-10-22T15:28:25,764   !!

2023-10-22T15:28:25,764           ********************************************************************************
2023-10-22T15:28:25,764           ############################
2023-10-22T15:28:25,764           # Package would be ignored #
2023-10-22T15:28:25,764           ############################
2023-10-22T15:28:25,764           Python recognizes 'pyhmmer.reexports' as an importable package[^1],
2023-10-22T15:28:25,764           but it is absent from setuptools' `packages` configuration.

2023-10-22T15:28:25,765           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-22T15:28:25,765           package, please make sure that 'pyhmmer.reexports' is explicitly added
2023-10-22T15:28:25,765           to the `packages` configuration field.

2023-10-22T15:28:25,765           Alternatively, you can also rely on setuptools' discovery methods
2023-10-22T15:28:25,765           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-22T15:28:25,765           instead of `find_packages(...)`/`find:`).

2023-10-22T15:28:25,766           You can read more about "package discovery" on setuptools documentation page:

2023-10-22T15:28:25,766           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-22T15:28:25,766           If you don't want 'pyhmmer.reexports' to be distributed and are
2023-10-22T15:28:25,766           already explicitly excluding 'pyhmmer.reexports' via
2023-10-22T15:28:25,766           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-22T15:28:25,766           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-22T15:28:25,766           combination with a more fine grained `package-data` configuration.

2023-10-22T15:28:25,767           You can read more about "package data files" on setuptools documentation page:

2023-10-22T15:28:25,767           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-22T15:28:25,767           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-22T15:28:25,767                 even if it does not contain any `.py` files.
2023-10-22T15:28:25,768                 On the other hand, currently there is no concept of package data
2023-10-22T15:28:25,768                 directory, all directories are treated like packages.
2023-10-22T15:28:25,768           ********************************************************************************

2023-10-22T15:28:25,768   !!
2023-10-22T15:28:25,768     check.warn(importable)
2023-10-22T15:28:25,768   /tmp/pip-build-env-7q49dd8s/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'pyhmmer.tests.data' is absent from the `packages` configuration.
2023-10-22T15:28:25,768   !!

2023-10-22T15:28:25,769           ********************************************************************************
2023-10-22T15:28:25,769           ############################
2023-10-22T15:28:25,769           # Package would be ignored #
2023-10-22T15:28:25,769           ############################
2023-10-22T15:28:25,769           Python recognizes 'pyhmmer.tests.data' as an importable package[^1],
2023-10-22T15:28:25,769           but it is absent from setuptools' `packages` configuration.

2023-10-22T15:28:25,769           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-22T15:28:25,769           package, please make sure that 'pyhmmer.tests.data' is explicitly added
2023-10-22T15:28:25,770           to the `packages` configuration field.

2023-10-22T15:28:25,770           Alternatively, you can also rely on setuptools' discovery methods
2023-10-22T15:28:25,770           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-22T15:28:25,770           instead of `find_packages(...)`/`find:`).

2023-10-22T15:28:25,770           You can read more about "package discovery" on setuptools documentation page:

2023-10-22T15:28:25,770           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-22T15:28:25,771           If you don't want 'pyhmmer.tests.data' to be distributed and are
2023-10-22T15:28:25,771           already explicitly excluding 'pyhmmer.tests.data' via
2023-10-22T15:28:25,771           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-22T15:28:25,771           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-22T15:28:25,771           combination with a more fine grained `package-data` configuration.

2023-10-22T15:28:25,771           You can read more about "package data files" on setuptools documentation page:

2023-10-22T15:28:25,772           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-22T15:28:25,772           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-22T15:28:25,772                 even if it does not contain any `.py` files.
2023-10-22T15:28:25,772                 On the other hand, currently there is no concept of package data
2023-10-22T15:28:25,772                 directory, all directories are treated like packages.
2023-10-22T15:28:25,772           ********************************************************************************

2023-10-22T15:28:25,773   !!
2023-10-22T15:28:25,773     check.warn(importable)
2023-10-22T15:28:25,773   /tmp/pip-build-env-7q49dd8s/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'pyhmmer.tests.data.hmms' is absent from the `packages` configuration.
2023-10-22T15:28:25,773   !!

2023-10-22T15:28:25,773           ********************************************************************************
2023-10-22T15:28:25,773           ############################
2023-10-22T15:28:25,773           # Package would be ignored #
2023-10-22T15:28:25,773           ############################
2023-10-22T15:28:25,774           Python recognizes 'pyhmmer.tests.data.hmms' as an importable package[^1],
2023-10-22T15:28:25,774           but it is absent from setuptools' `packages` configuration.

2023-10-22T15:28:25,774           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-22T15:28:25,774           package, please make sure that 'pyhmmer.tests.data.hmms' is explicitly added
2023-10-22T15:28:25,774           to the `packages` configuration field.

2023-10-22T15:28:25,774           Alternatively, you can also rely on setuptools' discovery methods
2023-10-22T15:28:25,774           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-22T15:28:25,774           instead of `find_packages(...)`/`find:`).

2023-10-22T15:28:25,775           You can read more about "package discovery" on setuptools documentation page:

2023-10-22T15:28:25,775           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-22T15:28:25,775           If you don't want 'pyhmmer.tests.data.hmms' to be distributed and are
2023-10-22T15:28:25,775           already explicitly excluding 'pyhmmer.tests.data.hmms' via
2023-10-22T15:28:25,775           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-22T15:28:25,775           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-22T15:28:25,776           combination with a more fine grained `package-data` configuration.

2023-10-22T15:28:25,776           You can read more about "package data files" on setuptools documentation page:

2023-10-22T15:28:25,776           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-22T15:28:25,776           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-22T15:28:25,776                 even if it does not contain any `.py` files.
2023-10-22T15:28:25,777                 On the other hand, currently there is no concept of package data
2023-10-22T15:28:25,777                 directory, all directories are treated like packages.
2023-10-22T15:28:25,777           ********************************************************************************

2023-10-22T15:28:25,777   !!
2023-10-22T15:28:25,777     check.warn(importable)
2023-10-22T15:28:25,777   /tmp/pip-build-env-7q49dd8s/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'pyhmmer.tests.data.hmms.bin' is absent from the `packages` configuration.
2023-10-22T15:28:25,777   !!

2023-10-22T15:28:25,778           ********************************************************************************
2023-10-22T15:28:25,778           ############################
2023-10-22T15:28:25,778           # Package would be ignored #
2023-10-22T15:28:25,778           ############################
2023-10-22T15:28:25,778           Python recognizes 'pyhmmer.tests.data.hmms.bin' as an importable package[^1],
2023-10-22T15:28:25,778           but it is absent from setuptools' `packages` configuration.

2023-10-22T15:28:25,778           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-22T15:28:25,778           package, please make sure that 'pyhmmer.tests.data.hmms.bin' is explicitly added
2023-10-22T15:28:25,778           to the `packages` configuration field.

2023-10-22T15:28:25,779           Alternatively, you can also rely on setuptools' discovery methods
2023-10-22T15:28:25,779           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-22T15:28:25,779           instead of `find_packages(...)`/`find:`).

2023-10-22T15:28:25,779           You can read more about "package discovery" on setuptools documentation page:

2023-10-22T15:28:25,779           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-22T15:28:25,780           If you don't want 'pyhmmer.tests.data.hmms.bin' to be distributed and are
2023-10-22T15:28:25,780           already explicitly excluding 'pyhmmer.tests.data.hmms.bin' via
2023-10-22T15:28:25,780           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-22T15:28:25,780           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-22T15:28:25,780           combination with a more fine grained `package-data` configuration.

2023-10-22T15:28:25,780           You can read more about "package data files" on setuptools documentation page:

2023-10-22T15:28:25,780           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-22T15:28:25,781           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-22T15:28:25,781                 even if it does not contain any `.py` files.
2023-10-22T15:28:25,781                 On the other hand, currently there is no concept of package data
2023-10-22T15:28:25,781                 directory, all directories are treated like packages.
2023-10-22T15:28:25,781           ********************************************************************************

2023-10-22T15:28:25,781   !!
2023-10-22T15:28:25,782     check.warn(importable)
2023-10-22T15:28:25,782   /tmp/pip-build-env-7q49dd8s/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'pyhmmer.tests.data.hmms.db' is absent from the `packages` configuration.
2023-10-22T15:28:25,782   !!

2023-10-22T15:28:25,782           ********************************************************************************
2023-10-22T15:28:25,782           ############################
2023-10-22T15:28:25,782           # Package would be ignored #
2023-10-22T15:28:25,782           ############################
2023-10-22T15:28:25,782           Python recognizes 'pyhmmer.tests.data.hmms.db' as an importable package[^1],
2023-10-22T15:28:25,783           but it is absent from setuptools' `packages` configuration.

2023-10-22T15:28:25,783           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-22T15:28:25,783           package, please make sure that 'pyhmmer.tests.data.hmms.db' is explicitly added
2023-10-22T15:28:25,783           to the `packages` configuration field.

2023-10-22T15:28:25,783           Alternatively, you can also rely on setuptools' discovery methods
2023-10-22T15:28:25,783           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-22T15:28:25,783           instead of `find_packages(...)`/`find:`).

2023-10-22T15:28:25,784           You can read more about "package discovery" on setuptools documentation page:

2023-10-22T15:28:25,784           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-22T15:28:25,784           If you don't want 'pyhmmer.tests.data.hmms.db' to be distributed and are
2023-10-22T15:28:25,784           already explicitly excluding 'pyhmmer.tests.data.hmms.db' via
2023-10-22T15:28:25,784           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-22T15:28:25,784           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-22T15:28:25,785           combination with a more fine grained `package-data` configuration.

2023-10-22T15:28:25,785           You can read more about "package data files" on setuptools documentation page:

2023-10-22T15:28:25,785           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-22T15:28:25,785           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-22T15:28:25,785                 even if it does not contain any `.py` files.
2023-10-22T15:28:25,786                 On the other hand, currently there is no concept of package data
2023-10-22T15:28:25,786                 directory, all directories are treated like packages.
2023-10-22T15:28:25,786           ********************************************************************************

2023-10-22T15:28:25,786   !!
2023-10-22T15:28:25,786     check.warn(importable)
2023-10-22T15:28:25,786   /tmp/pip-build-env-7q49dd8s/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'pyhmmer.tests.data.hmms.txt' is absent from the `packages` configuration.
2023-10-22T15:28:25,786   !!

2023-10-22T15:28:25,786           ********************************************************************************
2023-10-22T15:28:25,787           ############################
2023-10-22T15:28:25,787           # Package would be ignored #
2023-10-22T15:28:25,787           ############################
2023-10-22T15:28:25,787           Python recognizes 'pyhmmer.tests.data.hmms.txt' as an importable package[^1],
2023-10-22T15:28:25,787           but it is absent from setuptools' `packages` configuration.

2023-10-22T15:28:25,787           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-22T15:28:25,787           package, please make sure that 'pyhmmer.tests.data.hmms.txt' is explicitly added
2023-10-22T15:28:25,787           to the `packages` configuration field.

2023-10-22T15:28:25,788           Alternatively, you can also rely on setuptools' discovery methods
2023-10-22T15:28:25,788           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-22T15:28:25,788           instead of `find_packages(...)`/`find:`).

2023-10-22T15:28:25,788           You can read more about "package discovery" on setuptools documentation page:

2023-10-22T15:28:25,788           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-22T15:28:25,789           If you don't want 'pyhmmer.tests.data.hmms.txt' to be distributed and are
2023-10-22T15:28:25,789           already explicitly excluding 'pyhmmer.tests.data.hmms.txt' via
2023-10-22T15:28:25,789           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-22T15:28:25,789           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-22T15:28:25,789           combination with a more fine grained `package-data` configuration.

2023-10-22T15:28:25,789           You can read more about "package data files" on setuptools documentation page:

2023-10-22T15:28:25,790           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-22T15:28:25,790           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-22T15:28:25,790                 even if it does not contain any `.py` files.
2023-10-22T15:28:25,790                 On the other hand, currently there is no concept of package data
2023-10-22T15:28:25,790                 directory, all directories are treated like packages.
2023-10-22T15:28:25,790           ********************************************************************************

2023-10-22T15:28:25,791   !!
2023-10-22T15:28:25,791     check.warn(importable)
2023-10-22T15:28:25,791   /tmp/pip-build-env-7q49dd8s/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'pyhmmer.tests.data.hmms.txt2' is absent from the `packages` configuration.
2023-10-22T15:28:25,791   !!

2023-10-22T15:28:25,791           ********************************************************************************
2023-10-22T15:28:25,791           ############################
2023-10-22T15:28:25,791           # Package would be ignored #
2023-10-22T15:28:25,791           ############################
2023-10-22T15:28:25,792           Python recognizes 'pyhmmer.tests.data.hmms.txt2' as an importable package[^1],
2023-10-22T15:28:25,792           but it is absent from setuptools' `packages` configuration.

2023-10-22T15:28:25,792           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-22T15:28:25,792           package, please make sure that 'pyhmmer.tests.data.hmms.txt2' is explicitly added
2023-10-22T15:28:25,792           to the `packages` configuration field.

2023-10-22T15:28:25,792           Alternatively, you can also rely on setuptools' discovery methods
2023-10-22T15:28:25,793           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-22T15:28:25,793           instead of `find_packages(...)`/`find:`).

2023-10-22T15:28:25,793           You can read more about "package discovery" on setuptools documentation page:

2023-10-22T15:28:25,793           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-22T15:28:25,793           If you don't want 'pyhmmer.tests.data.hmms.txt2' to be distributed and are
2023-10-22T15:28:25,793           already explicitly excluding 'pyhmmer.tests.data.hmms.txt2' via
2023-10-22T15:28:25,793           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-22T15:28:25,794           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-22T15:28:25,794           combination with a more fine grained `package-data` configuration.

2023-10-22T15:28:25,794           You can read more about "package data files" on setuptools documentation page:

2023-10-22T15:28:25,794           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-22T15:28:25,794           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-22T15:28:25,795                 even if it does not contain any `.py` files.
2023-10-22T15:28:25,795                 On the other hand, currently there is no concept of package data
2023-10-22T15:28:25,795                 directory, all directories are treated like packages.
2023-10-22T15:28:25,795           ********************************************************************************

2023-10-22T15:28:25,795   !!
2023-10-22T15:28:25,795     check.warn(importable)
2023-10-22T15:28:25,795   /tmp/pip-build-env-7q49dd8s/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'pyhmmer.tests.data.jackhmmer' is absent from the `packages` configuration.
2023-10-22T15:28:25,795   !!

2023-10-22T15:28:25,796           ********************************************************************************
2023-10-22T15:28:25,796           ############################
2023-10-22T15:28:25,796           # Package would be ignored #
2023-10-22T15:28:25,796           ############################
2023-10-22T15:28:25,796           Python recognizes 'pyhmmer.tests.data.jackhmmer' as an importable package[^1],
2023-10-22T15:28:25,796           but it is absent from setuptools' `packages` configuration.

2023-10-22T15:28:25,797           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-22T15:28:25,797           package, please make sure that 'pyhmmer.tests.data.jackhmmer' is explicitly added
2023-10-22T15:28:25,797           to the `packages` configuration field.

2023-10-22T15:28:25,797           Alternatively, you can also rely on setuptools' discovery methods
2023-10-22T15:28:25,797           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-22T15:28:25,798           instead of `find_packages(...)`/`find:`).

2023-10-22T15:28:25,798           You can read more about "package discovery" on setuptools documentation page:

2023-10-22T15:28:25,798           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-22T15:28:25,799           If you don't want 'pyhmmer.tests.data.jackhmmer' to be distributed and are
2023-10-22T15:28:25,799           already explicitly excluding 'pyhmmer.tests.data.jackhmmer' via
2023-10-22T15:28:25,799           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-22T15:28:25,799           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-22T15:28:25,799           combination with a more fine grained `package-data` configuration.

2023-10-22T15:28:25,800           You can read more about "package data files" on setuptools documentation page:

2023-10-22T15:28:25,800           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-22T15:28:25,800           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-22T15:28:25,801                 even if it does not contain any `.py` files.
2023-10-22T15:28:25,801                 On the other hand, currently there is no concept of package data
2023-10-22T15:28:25,801                 directory, all directories are treated like packages.
2023-10-22T15:28:25,801           ********************************************************************************

2023-10-22T15:28:25,801   !!
2023-10-22T15:28:25,802     check.warn(importable)
2023-10-22T15:28:25,802   /tmp/pip-build-env-7q49dd8s/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'pyhmmer.tests.data.msa' is absent from the `packages` configuration.
2023-10-22T15:28:25,802   !!

2023-10-22T15:28:25,802           ********************************************************************************
2023-10-22T15:28:25,802           ############################
2023-10-22T15:28:25,803           # Package would be ignored #
2023-10-22T15:28:25,803           ############################
2023-10-22T15:28:25,803           Python recognizes 'pyhmmer.tests.data.msa' as an importable package[^1],
2023-10-22T15:28:25,803           but it is absent from setuptools' `packages` configuration.

2023-10-22T15:28:25,803           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-22T15:28:25,803           package, please make sure that 'pyhmmer.tests.data.msa' is explicitly added
2023-10-22T15:28:25,804           to the `packages` configuration field.

2023-10-22T15:28:25,804           Alternatively, you can also rely on setuptools' discovery methods
2023-10-22T15:28:25,804           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-22T15:28:25,804           instead of `find_packages(...)`/`find:`).

2023-10-22T15:28:25,805           You can read more about "package discovery" on setuptools documentation page:

2023-10-22T15:28:25,805           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-22T15:28:25,805           If you don't want 'pyhmmer.tests.data.msa' to be distributed and are
2023-10-22T15:28:25,806           already explicitly excluding 'pyhmmer.tests.data.msa' via
2023-10-22T15:28:25,806           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-22T15:28:25,806           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-22T15:28:25,806           combination with a more fine grained `package-data` configuration.

2023-10-22T15:28:25,806           You can read more about "package data files" on setuptools documentation page:

2023-10-22T15:28:25,807           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-22T15:28:25,807           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-22T15:28:25,807                 even if it does not contain any `.py` files.
2023-10-22T15:28:25,807                 On the other hand, currently there is no concept of package data
2023-10-22T15:28:25,808                 directory, all directories are treated like packages.
2023-10-22T15:28:25,808           ********************************************************************************

2023-10-22T15:28:25,808   !!
2023-10-22T15:28:25,808     check.warn(importable)
2023-10-22T15:28:25,808   /tmp/pip-build-env-7q49dd8s/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'pyhmmer.tests.data.seqs' is absent from the `packages` configuration.
2023-10-22T15:28:25,809   !!

2023-10-22T15:28:25,809           ********************************************************************************
2023-10-22T15:28:25,809           ############################
2023-10-22T15:28:25,809           # Package would be ignored #
2023-10-22T15:28:25,809           ############################
2023-10-22T15:28:25,810           Python recognizes 'pyhmmer.tests.data.seqs' as an importable package[^1],
2023-10-22T15:28:25,810           but it is absent from setuptools' `packages` configuration.

2023-10-22T15:28:25,810           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-22T15:28:25,810           package, please make sure that 'pyhmmer.tests.data.seqs' is explicitly added
2023-10-22T15:28:25,810           to the `packages` configuration field.

2023-10-22T15:28:25,811           Alternatively, you can also rely on setuptools' discovery methods
2023-10-22T15:28:25,811           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-22T15:28:25,811           instead of `find_packages(...)`/`find:`).

2023-10-22T15:28:25,812           You can read more about "package discovery" on setuptools documentation page:

2023-10-22T15:28:25,812           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-22T15:28:25,812           If you don't want 'pyhmmer.tests.data.seqs' to be distributed and are
2023-10-22T15:28:25,812           already explicitly excluding 'pyhmmer.tests.data.seqs' via
2023-10-22T15:28:25,812           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-22T15:28:25,813           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-22T15:28:25,813           combination with a more fine grained `package-data` configuration.

2023-10-22T15:28:25,813           You can read more about "package data files" on setuptools documentation page:

2023-10-22T15:28:25,813           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-22T15:28:25,814           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-22T15:28:25,814                 even if it does not contain any `.py` files.
2023-10-22T15:28:25,814                 On the other hand, currently there is no concept of package data
2023-10-22T15:28:25,814                 directory, all directories are treated like packages.
2023-10-22T15:28:25,814           ********************************************************************************

2023-10-22T15:28:25,815   !!
2023-10-22T15:28:25,816     check.warn(importable)
2023-10-22T15:28:25,816   /tmp/pip-build-env-7q49dd8s/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'pyhmmer.tests.data.tables' is absent from the `packages` configuration.
2023-10-22T15:28:25,817   !!

2023-10-22T15:28:25,817           ********************************************************************************
2023-10-22T15:28:25,818           ############################
2023-10-22T15:28:25,818           # Package would be ignored #
2023-10-22T15:28:25,818           ############################
2023-10-22T15:28:25,818           Python recognizes 'pyhmmer.tests.data.tables' as an importable package[^1],
2023-10-22T15:28:25,818           but it is absent from setuptools' `packages` configuration.

2023-10-22T15:28:25,819           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-22T15:28:25,819           package, please make sure that 'pyhmmer.tests.data.tables' is explicitly added
2023-10-22T15:28:25,819           to the `packages` configuration field.

2023-10-22T15:28:25,819           Alternatively, you can also rely on setuptools' discovery methods
2023-10-22T15:28:25,819           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-22T15:28:25,820           instead of `find_packages(...)`/`find:`).

2023-10-22T15:28:25,820           You can read more about "package discovery" on setuptools documentation page:

2023-10-22T15:28:25,820           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-22T15:28:25,821           If you don't want 'pyhmmer.tests.data.tables' to be distributed and are
2023-10-22T15:28:25,821           already explicitly excluding 'pyhmmer.tests.data.tables' via
2023-10-22T15:28:25,821           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-22T15:28:25,821           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-22T15:28:25,821           combination with a more fine grained `package-data` configuration.

2023-10-22T15:28:25,821           You can read more about "package data files" on setuptools documentation page:

2023-10-22T15:28:25,822           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-22T15:28:25,822           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-22T15:28:25,822                 even if it does not contain any `.py` files.
2023-10-22T15:28:25,823                 On the other hand, currently there is no concept of package data
2023-10-22T15:28:25,823                 directory, all directories are treated like packages.
2023-10-22T15:28:25,823           ********************************************************************************

2023-10-22T15:28:25,823   !!
2023-10-22T15:28:25,823     check.warn(importable)
2023-10-22T15:28:25,824   copying pyhmmer/_getid.pxi -> build/lib.linux-armv7l-cpython-39/pyhmmer
2023-10-22T15:28:25,824   copying pyhmmer/daemon.pxd -> build/lib.linux-armv7l-cpython-39/pyhmmer
2023-10-22T15:28:25,824   copying pyhmmer/daemon.pyi -> build/lib.linux-armv7l-cpython-39/pyhmmer
2023-10-22T15:28:25,824   copying pyhmmer/daemon.pyx -> build/lib.linux-armv7l-cpython-39/pyhmmer
2023-10-22T15:28:25,824   copying pyhmmer/easel.pxd -> build/lib.linux-armv7l-cpython-39/pyhmmer
2023-10-22T15:28:25,824   copying pyhmmer/easel.pyi -> build/lib.linux-armv7l-cpython-39/pyhmmer
2023-10-22T15:28:25,825   copying pyhmmer/easel.pyx -> build/lib.linux-armv7l-cpython-39/pyhmmer
2023-10-22T15:28:25,825   copying pyhmmer/errors.pyi -> build/lib.linux-armv7l-cpython-39/pyhmmer
2023-10-22T15:28:25,825   copying pyhmmer/errors.pyx -> build/lib.linux-armv7l-cpython-39/pyhmmer
2023-10-22T15:28:25,825   copying pyhmmer/exceptions.pxi -> build/lib.linux-armv7l-cpython-39/pyhmmer
2023-10-22T15:28:25,826   copying pyhmmer/plan7.pxd -> build/lib.linux-armv7l-cpython-39/pyhmmer
2023-10-22T15:28:25,829   copying pyhmmer/plan7.pyi -> build/lib.linux-armv7l-cpython-39/pyhmmer
2023-10-22T15:28:25,832   copying pyhmmer/plan7.pyx -> build/lib.linux-armv7l-cpython-39/pyhmmer
2023-10-22T15:28:25,839   copying pyhmmer/py.typed -> build/lib.linux-armv7l-cpython-39/pyhmmer
2023-10-22T15:28:25,840   creating build/lib.linux-armv7l-cpython-39/pyhmmer/fileobj
2023-10-22T15:28:25,841   copying pyhmmer/fileobj/__init__.pxd -> build/lib.linux-armv7l-cpython-39/pyhmmer/fileobj
2023-10-22T15:28:25,843   copying pyhmmer/fileobj/bsd.h -> build/lib.linux-armv7l-cpython-39/pyhmmer/fileobj
2023-10-22T15:28:25,845   copying pyhmmer/fileobj/bsd.pxd -> build/lib.linux-armv7l-cpython-39/pyhmmer/fileobj
2023-10-22T15:28:25,847   copying pyhmmer/fileobj/linux.h -> build/lib.linux-armv7l-cpython-39/pyhmmer/fileobj
2023-10-22T15:28:25,850   copying pyhmmer/fileobj/linux.pxd -> build/lib.linux-armv7l-cpython-39/pyhmmer/fileobj
2023-10-22T15:28:25,852   copying pyhmmer/fileobj/util.h -> build/lib.linux-armv7l-cpython-39/pyhmmer/fileobj
2023-10-22T15:28:25,854   creating build/lib.linux-armv7l-cpython-39/pyhmmer/reexports
2023-10-22T15:28:25,854   copying pyhmmer/reexports/__init__.pxd -> build/lib.linux-armv7l-cpython-39/pyhmmer/reexports
2023-10-22T15:28:25,856   copying pyhmmer/reexports/esl_sqio_ascii.h -> build/lib.linux-armv7l-cpython-39/pyhmmer/reexports
2023-10-22T15:28:25,858   copying pyhmmer/reexports/esl_sqio_ascii.pxd -> build/lib.linux-armv7l-cpython-39/pyhmmer/reexports
2023-10-22T15:28:25,860   copying pyhmmer/reexports/p7_hmmfile.h -> build/lib.linux-armv7l-cpython-39/pyhmmer/reexports
2023-10-22T15:28:25,862   copying pyhmmer/reexports/p7_hmmfile.pxd -> build/lib.linux-armv7l-cpython-39/pyhmmer/reexports
2023-10-22T15:28:25,864   copying pyhmmer/reexports/p7_tophits.h -> build/lib.linux-armv7l-cpython-39/pyhmmer/reexports
2023-10-22T15:28:25,866   copying pyhmmer/reexports/p7_tophits.pxd -> build/lib.linux-armv7l-cpython-39/pyhmmer/reexports
2023-10-22T15:28:25,868   copying pyhmmer/tests/requirements.txt -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests
2023-10-22T15:28:25,870   creating build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data
2023-10-22T15:28:25,871   copying pyhmmer/tests/data/README.md -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data
2023-10-22T15:28:25,873   creating build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms
2023-10-22T15:28:25,874   copying pyhmmer/tests/data/hmms/make.sh -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms
2023-10-22T15:28:25,876   creating build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/bin
2023-10-22T15:28:25,877   copying pyhmmer/tests/data/hmms/bin/PF02826.h3m -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/bin
2023-10-22T15:28:25,880   copying pyhmmer/tests/data/hmms/bin/PKSI-AT.h3m -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/bin
2023-10-22T15:28:25,884   copying pyhmmer/tests/data/hmms/bin/Thioesterase.h3m -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/bin
2023-10-22T15:28:25,887   copying pyhmmer/tests/data/hmms/bin/t2pks.h3m -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/bin
2023-10-22T15:28:25,936   creating build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db
2023-10-22T15:28:25,937   copying pyhmmer/tests/data/hmms/db/PF02826.hmm -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db
2023-10-22T15:28:25,941   copying pyhmmer/tests/data/hmms/db/PF02826.hmm.h3f -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db
2023-10-22T15:28:25,943   copying pyhmmer/tests/data/hmms/db/PF02826.hmm.h3i -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db
2023-10-22T15:28:25,945   copying pyhmmer/tests/data/hmms/db/PF02826.hmm.h3m -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db
2023-10-22T15:28:25,948   copying pyhmmer/tests/data/hmms/db/PF02826.hmm.h3p -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db
2023-10-22T15:28:25,951   copying pyhmmer/tests/data/hmms/db/PKSI-AT.hmm -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db
2023-10-22T15:28:25,956   copying pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3f -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db
2023-10-22T15:28:25,959   copying pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3i -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db
2023-10-22T15:28:25,961   copying pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3m -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db
2023-10-22T15:28:25,964   copying pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3p -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db
2023-10-22T15:28:25,968   copying pyhmmer/tests/data/hmms/db/Thioesterase.hmm -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db
2023-10-22T15:28:25,972   copying pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3f -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db
2023-10-22T15:28:25,975   copying pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3i -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db
2023-10-22T15:28:25,977   copying pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3m -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db
2023-10-22T15:28:25,980   copying pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3p -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db
2023-10-22T15:28:25,983   copying pyhmmer/tests/data/hmms/db/t2pks.hmm -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db
2023-10-22T15:28:26,073   copying pyhmmer/tests/data/hmms/db/t2pks.hmm.h3f -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db
2023-10-22T15:28:26,096   copying pyhmmer/tests/data/hmms/db/t2pks.hmm.h3i -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db
2023-10-22T15:28:26,098   copying pyhmmer/tests/data/hmms/db/t2pks.hmm.h3m -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db
2023-10-22T15:28:26,136   copying pyhmmer/tests/data/hmms/db/t2pks.hmm.h3p -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db
2023-10-22T15:28:26,184   creating build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/txt
2023-10-22T15:28:26,185   copying pyhmmer/tests/data/hmms/txt/LuxC.hmm -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/txt
2023-10-22T15:28:26,190   copying pyhmmer/tests/data/hmms/txt/PF02826.hmm -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/txt
2023-10-22T15:28:26,194   copying pyhmmer/tests/data/hmms/txt/PKSI-AT.hmm -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/txt
2023-10-22T15:28:26,199   copying pyhmmer/tests/data/hmms/txt/Thioesterase.hmm -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/txt
2023-10-22T15:28:26,203   copying pyhmmer/tests/data/hmms/txt/bmyD.hmm -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/txt
2023-10-22T15:28:26,209   copying pyhmmer/tests/data/hmms/txt/laccase.hmm -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/txt
2023-10-22T15:28:26,216   copying pyhmmer/tests/data/hmms/txt/t2pks.hmm -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/txt
2023-10-22T15:28:26,313   creating build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/txt2
2023-10-22T15:28:26,314   copying pyhmmer/tests/data/hmms/txt2/PF02826.hmm2 -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/txt2
2023-10-22T15:28:26,318   copying pyhmmer/tests/data/hmms/txt2/PKSI-AT.hmm2 -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/txt2
2023-10-22T15:28:26,323   copying pyhmmer/tests/data/hmms/txt2/Thioesterase.hmm2 -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/txt2
2023-10-22T15:28:26,327   copying pyhmmer/tests/data/hmms/txt2/t2pks.hmm2 -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/txt2
2023-10-22T15:28:26,404   creating build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/jackhmmer
2023-10-22T15:28:26,405   copying pyhmmer/tests/data/jackhmmer/KR-1.sto -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/jackhmmer
2023-10-22T15:28:26,408   copying pyhmmer/tests/data/jackhmmer/KR-1_bkup.sto -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/jackhmmer
2023-10-22T15:28:26,410   copying pyhmmer/tests/data/jackhmmer/KR-2.sto -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/jackhmmer
2023-10-22T15:28:26,413   copying pyhmmer/tests/data/jackhmmer/KR-3.sto -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/jackhmmer
2023-10-22T15:28:26,415   copying pyhmmer/tests/data/jackhmmer/KR-4.sto -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/jackhmmer
2023-10-22T15:28:26,418   copying pyhmmer/tests/data/jackhmmer/KR-5.sto -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/jackhmmer
2023-10-22T15:28:26,420   copying pyhmmer/tests/data/jackhmmer/KR-6.sto -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/jackhmmer
2023-10-22T15:28:26,423   copying pyhmmer/tests/data/jackhmmer/p12748-1.sto -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/jackhmmer
2023-10-22T15:28:26,425   copying pyhmmer/tests/data/jackhmmer/p12748-2.sto -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/jackhmmer
2023-10-22T15:28:26,427   copying pyhmmer/tests/data/jackhmmer/p12748-3.sto -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/jackhmmer
2023-10-22T15:28:26,430   creating build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/msa
2023-10-22T15:28:26,431   copying pyhmmer/tests/data/msa/LuxC.faa -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/msa
2023-10-22T15:28:26,433   copying pyhmmer/tests/data/msa/LuxC.hmmalign.sto -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/msa
2023-10-22T15:28:26,436   copying pyhmmer/tests/data/msa/LuxC.sto -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/msa
2023-10-22T15:28:26,438   copying pyhmmer/tests/data/msa/laccase.clw -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/msa
2023-10-22T15:28:26,440   creating build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/seqs
2023-10-22T15:28:26,441   copying pyhmmer/tests/data/seqs/938293.PRJEB85.HG003687.faa -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/seqs
2023-10-22T15:28:26,465   copying pyhmmer/tests/data/seqs/BGC0001090.gbk -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/seqs
2023-10-22T15:28:26,472   copying pyhmmer/tests/data/seqs/CP000560.2.fna -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/seqs
2023-10-22T15:28:26,544   copying pyhmmer/tests/data/seqs/CP040672.1.genes_100.fna -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/seqs
2023-10-22T15:28:26,548   copying pyhmmer/tests/data/seqs/LuxC.faa -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/seqs
2023-10-22T15:28:26,550   copying pyhmmer/tests/data/seqs/PKSI.faa -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/seqs
2023-10-22T15:28:26,553   copying pyhmmer/tests/data/seqs/bmyD.fna -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/seqs
2023-10-22T15:28:26,555   creating build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/tables
2023-10-22T15:28:26,556   copying pyhmmer/tests/data/tables/A0A089QRB9.domtbl -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/tables
2023-10-22T15:28:26,559   copying pyhmmer/tests/data/tables/PF02826.domtbl -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/tables
2023-10-22T15:28:26,561   copying pyhmmer/tests/data/tables/PF02826.tbl -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/tables
2023-10-22T15:28:26,564   copying pyhmmer/tests/data/tables/bmyD1.tbl -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/tables
2023-10-22T15:28:26,566   copying pyhmmer/tests/data/tables/bmyD2.tbl -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/tables
2023-10-22T15:28:26,568   copying pyhmmer/tests/data/tables/bmyD3.tbl -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/tables
2023-10-22T15:28:26,570   copying pyhmmer/tests/data/tables/t2pks.domtbl -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/tables
2023-10-22T15:28:26,573   copying pyhmmer/tests/data/tables/t2pks.scan.tbl -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/tables
2023-10-22T15:28:26,575   copying pyhmmer/tests/data/tables/t2pks.tbl -> build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/tables
2023-10-22T15:28:26,581   running build_clib
2023-10-22T15:28:26,589   creating build/temp.linux-armv7l-cpython-39
2023-10-22T15:28:26,590   generating "divsufsort.h" for divsufsort library
2023-10-22T15:28:26,590   copying vendor/hmmer/libdivsufsort/divsufsort.h.in -> build/temp.linux-armv7l-cpython-39/divsufsort.h
2023-10-22T15:28:26,592   generating "esl_config.h" for easel library
2023-10-22T15:28:26,594   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -c build/temp.linux-armv7l-cpython-39/have_NEON.c -o build/temp.linux-armv7l-cpython-39/have_NEON.o
2023-10-22T15:28:26,937   arm-linux-gnueabihf-gcc -pthread -mfpu=neon build/temp.linux-armv7l-cpython-39/have_NEON.o -o build/temp.linux-armv7l-cpython-39/have_NEON
2023-10-22T15:28:27,045   checking whether compiler can build NEON code... yes, with -mfpu=neon
2023-10-22T15:28:27,048   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_stdio_h.c -o build/temp.linux-armv7l-cpython-39/have_stdio_h.o
2023-10-22T15:28:27,127   checking whether <stdio.h> can be included... yes
2023-10-22T15:28:27,130   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_stdlib_h.c -o build/temp.linux-armv7l-cpython-39/have_stdlib_h.o
2023-10-22T15:28:27,220   checking whether <stdlib.h> can be included... yes
2023-10-22T15:28:27,223   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_string_h.c -o build/temp.linux-armv7l-cpython-39/have_string_h.o
2023-10-22T15:28:27,293   checking whether <string.h> can be included... yes
2023-10-22T15:28:27,295   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_inttypes_h.c -o build/temp.linux-armv7l-cpython-39/have_inttypes_h.o
2023-10-22T15:28:27,366   checking whether <inttypes.h> can be included... yes
2023-10-22T15:28:27,369   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_stdint_h.c -o build/temp.linux-armv7l-cpython-39/have_stdint_h.o
2023-10-22T15:28:27,438   checking whether <stdint.h> can be included... yes
2023-10-22T15:28:27,440   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_strings_h.c -o build/temp.linux-armv7l-cpython-39/have_strings_h.o
2023-10-22T15:28:27,508   checking whether <strings.h> can be included... yes
2023-10-22T15:28:27,510   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_sys_stat_h.c -o build/temp.linux-armv7l-cpython-39/have_sys_stat_h.o
2023-10-22T15:28:27,582   checking whether <sys/stat.h> can be included... yes
2023-10-22T15:28:27,584   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_sys_types_h.c -o build/temp.linux-armv7l-cpython-39/have_sys_types_h.o
2023-10-22T15:28:27,662   checking whether <sys/types.h> can be included... yes
2023-10-22T15:28:27,664   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_unistd_h.c -o build/temp.linux-armv7l-cpython-39/have_unistd_h.o
2023-10-22T15:28:27,743   checking whether <unistd.h> can be included... yes
2023-10-22T15:28:27,745   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_endian_h.c -o build/temp.linux-armv7l-cpython-39/have_endian_h.o
2023-10-22T15:28:27,826   checking whether <endian.h> can be included... yes
2023-10-22T15:28:27,829   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_netinet_in_h.c -o build/temp.linux-armv7l-cpython-39/have_netinet_in_h.o
2023-10-22T15:28:27,957   checking whether <netinet/in.h> can be included... yes
2023-10-22T15:28:27,961   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_sys_param_h.c -o build/temp.linux-armv7l-cpython-39/have_sys_param_h.o
2023-10-22T15:28:28,064   checking whether <sys/param.h> can be included... yes
2023-10-22T15:28:28,067   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_sys_sysctl_h.c -o build/temp.linux-armv7l-cpython-39/have_sys_sysctl_h.o
2023-10-22T15:28:28,109   In file included from build/temp.linux-armv7l-cpython-39/have_sys_sysctl_h.c:1:
2023-10-22T15:28:28,110   /usr/include/arm-linux-gnueabihf/sys/sysctl.h:21:2: warning: #warning "The <sys/sysctl.h> header is deprecated and will be removed." [-Wcpp]
2023-10-22T15:28:28,110      21 | #warning "The <sys/sysctl.h> header is deprecated and will be removed."
2023-10-22T15:28:28,110         |  ^~~~~~~
2023-10-22T15:28:28,142   checking whether <sys/sysctl.h> can be included... yes
2023-10-22T15:28:28,145   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_aligned_alloc.c -o build/temp.linux-armv7l-cpython-39/have_aligned_alloc.o -Wno-all
2023-10-22T15:28:28,243   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-39/have_aligned_alloc.o -o build/temp.linux-armv7l-cpython-39/have_aligned_alloc.bin
2023-10-22T15:28:28,340   checking whether function 'aligned_alloc' is available... yes
2023-10-22T15:28:28,343   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_erfc.c -o build/temp.linux-armv7l-cpython-39/have_erfc.o -Wno-all
2023-10-22T15:28:28,450   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-39/have_erfc.o -o build/temp.linux-armv7l-cpython-39/have_erfc.bin
2023-10-22T15:28:28,546   checking whether function 'erfc' is available... yes
2023-10-22T15:28:28,548   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_getpid.c -o build/temp.linux-armv7l-cpython-39/have_getpid.o -Wno-all
2023-10-22T15:28:28,638   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-39/have_getpid.o -o build/temp.linux-armv7l-cpython-39/have_getpid.bin
2023-10-22T15:28:28,754   checking whether function 'getpid' is available... yes
2023-10-22T15:28:28,757   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have__mm_malloc.c -o build/temp.linux-armv7l-cpython-39/have__mm_malloc.o -Wno-all
2023-10-22T15:28:28,862   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-39/have__mm_malloc.o -o build/temp.linux-armv7l-cpython-39/have__mm_malloc.bin
2023-10-22T15:28:28,950   /usr/bin/ld: build/temp.linux-armv7l-cpython-39/have__mm_malloc.o: in function `main':
2023-10-22T15:28:28,950   /tmp/pip-wheel-d82tfrzg/pyhmmer_fbc32e4d68984d8abeda4e36e31a8b14/build/temp.linux-armv7l-cpython-39/have__mm_malloc.c:2: undefined reference to `_mm_malloc'
2023-10-22T15:28:28,955   collect2: error: ld returned 1 exit status
2023-10-22T15:28:28,957   checking whether function '_mm_malloc' is available... no
2023-10-22T15:28:28,959   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_popen.c -o build/temp.linux-armv7l-cpython-39/have_popen.o -Wno-all
2023-10-22T15:28:29,050   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-39/have_popen.o -o build/temp.linux-armv7l-cpython-39/have_popen.bin
2023-10-22T15:28:29,148   checking whether function 'popen' is available... yes
2023-10-22T15:28:29,151   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_posix_memalign.c -o build/temp.linux-armv7l-cpython-39/have_posix_memalign.o -Wno-all
2023-10-22T15:28:29,255   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-39/have_posix_memalign.o -o build/temp.linux-armv7l-cpython-39/have_posix_memalign.bin
2023-10-22T15:28:29,352   checking whether function 'posix_memalign' is available... yes
2023-10-22T15:28:29,355   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_strcasecmp.c -o build/temp.linux-armv7l-cpython-39/have_strcasecmp.o -Wno-all
2023-10-22T15:28:29,435   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-39/have_strcasecmp.o -o build/temp.linux-armv7l-cpython-39/have_strcasecmp.bin
2023-10-22T15:28:29,548   checking whether function 'strcasecmp' is available... yes
2023-10-22T15:28:29,551   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_strsep.c -o build/temp.linux-armv7l-cpython-39/have_strsep.o -Wno-all
2023-10-22T15:28:29,674   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-39/have_strsep.o -o build/temp.linux-armv7l-cpython-39/have_strsep.bin
2023-10-22T15:28:29,778   checking whether function 'strsep' is available... yes
2023-10-22T15:28:29,780   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_sysconf.c -o build/temp.linux-armv7l-cpython-39/have_sysconf.o -Wno-all
2023-10-22T15:28:29,870   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-39/have_sysconf.o -o build/temp.linux-armv7l-cpython-39/have_sysconf.bin
2023-10-22T15:28:29,968   checking whether function 'sysconf' is available... yes
2023-10-22T15:28:29,971   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_sysctl.c -o build/temp.linux-armv7l-cpython-39/have_sysctl.o -Wno-all
2023-10-22T15:28:30,028   In file included from build/temp.linux-armv7l-cpython-39/have_sysctl.c:2:
2023-10-22T15:28:30,028   /usr/include/arm-linux-gnueabihf/sys/sysctl.h:21:2: warning: #warning "The <sys/sysctl.h> header is deprecated and will be removed." [-Wcpp]
2023-10-22T15:28:30,028      21 | #warning "The <sys/sysctl.h> header is deprecated and will be removed."
2023-10-22T15:28:30,028         |  ^~~~~~~
2023-10-22T15:28:30,036   build/temp.linux-armv7l-cpython-39/have_sysctl.c: In function ‘main’:
2023-10-22T15:28:30,036   build/temp.linux-armv7l-cpython-39/have_sysctl.c:4:1: warning: ‘sysctl’ is deprecated [-Wdeprecated-declarations]
2023-10-22T15:28:30,037       4 | int main() { sysctl(NULL, 0, NULL, NULL, NULL, 0); return 0; }
2023-10-22T15:28:30,037         | ^~~
2023-10-22T15:28:30,037   In file included from build/temp.linux-armv7l-cpython-39/have_sysctl.c:2:
2023-10-22T15:28:30,037   /usr/include/arm-linux-gnueabihf/sys/sysctl.h:70:12: note: declared here
2023-10-22T15:28:30,037      70 | extern int sysctl (int *__name, int __nlen, void *__oldval,
2023-10-22T15:28:30,037         |            ^~~~~~
2023-10-22T15:28:30,073   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-39/have_sysctl.o -o build/temp.linux-armv7l-cpython-39/have_sysctl.bin
2023-10-22T15:28:30,169   checking whether function 'sysctl' is available... yes
2023-10-22T15:28:30,171   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_times.c -o build/temp.linux-armv7l-cpython-39/have_times.o -Wno-all
2023-10-22T15:28:30,253   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-39/have_times.o -o build/temp.linux-armv7l-cpython-39/have_times.bin
2023-10-22T15:28:30,350   checking whether function 'times' is available... yes
2023-10-22T15:28:30,352   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_fseeko.c -o build/temp.linux-armv7l-cpython-39/have_fseeko.o -Wno-all
2023-10-22T15:28:30,464   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-39/have_fseeko.o -o build/temp.linux-armv7l-cpython-39/have_fseeko.bin
2023-10-22T15:28:30,576   checking whether function 'fseeko' is available... yes
2023-10-22T15:28:30,579   generating "p7_config.h" for hmmer library
2023-10-22T15:28:30,580   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -c build/temp.linux-armv7l-cpython-39/have_NEON.c -o build/temp.linux-armv7l-cpython-39/have_NEON.o
2023-10-22T15:28:30,921   arm-linux-gnueabihf-gcc -pthread -mfpu=neon build/temp.linux-armv7l-cpython-39/have_NEON.o -o build/temp.linux-armv7l-cpython-39/have_NEON
2023-10-22T15:28:31,023   checking whether compiler can build NEON code... yes, with -mfpu=neon
2023-10-22T15:28:31,026   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_endian_h.c -o build/temp.linux-armv7l-cpython-39/have_endian_h.o
2023-10-22T15:28:31,094   checking whether <endian.h> can be included... yes
2023-10-22T15:28:31,096   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_inttypes_h.c -o build/temp.linux-armv7l-cpython-39/have_inttypes_h.o
2023-10-22T15:28:31,167   checking whether <inttypes.h> can be included... yes
2023-10-22T15:28:31,169   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_stdint_h.c -o build/temp.linux-armv7l-cpython-39/have_stdint_h.o
2023-10-22T15:28:31,239   checking whether <stdint.h> can be included... yes
2023-10-22T15:28:31,242   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_unistd_h.c -o build/temp.linux-armv7l-cpython-39/have_unistd_h.o
2023-10-22T15:28:31,318   checking whether <unistd.h> can be included... yes
2023-10-22T15:28:31,320   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_sys_types_h.c -o build/temp.linux-armv7l-cpython-39/have_sys_types_h.o
2023-10-22T15:28:31,398   checking whether <sys/types.h> can be included... yes
2023-10-22T15:28:31,400   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_netinet_in_h.c -o build/temp.linux-armv7l-cpython-39/have_netinet_in_h.o
2023-10-22T15:28:31,492   checking whether <netinet/in.h> can be included... yes
2023-10-22T15:28:31,494   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_sys_param_h.c -o build/temp.linux-armv7l-cpython-39/have_sys_param_h.o
2023-10-22T15:28:31,590   checking whether <sys/param.h> can be included... yes
2023-10-22T15:28:31,592   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_sys_sysctl_h.c -o build/temp.linux-armv7l-cpython-39/have_sys_sysctl_h.o
2023-10-22T15:28:31,633   In file included from build/temp.linux-armv7l-cpython-39/have_sys_sysctl_h.c:1:
2023-10-22T15:28:31,634   /usr/include/arm-linux-gnueabihf/sys/sysctl.h:21:2: warning: #warning "The <sys/sysctl.h> header is deprecated and will be removed." [-Wcpp]
2023-10-22T15:28:31,634      21 | #warning "The <sys/sysctl.h> header is deprecated and will be removed."
2023-10-22T15:28:31,634         |  ^~~~~~~
2023-10-22T15:28:31,665   checking whether <sys/sysctl.h> can be included... yes
2023-10-22T15:28:31,667   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_mkstemp.c -o build/temp.linux-armv7l-cpython-39/have_mkstemp.o -Wno-all
2023-10-22T15:28:31,768   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-39/have_mkstemp.o -o build/temp.linux-armv7l-cpython-39/have_mkstemp.bin
2023-10-22T15:28:31,864   checking whether function 'mkstemp' is available... yes
2023-10-22T15:28:31,867   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_popen.c -o build/temp.linux-armv7l-cpython-39/have_popen.o -Wno-all
2023-10-22T15:28:31,969   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-39/have_popen.o -o build/temp.linux-armv7l-cpython-39/have_popen.bin
2023-10-22T15:28:32,081   checking whether function 'popen' is available... yes
2023-10-22T15:28:32,084   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_putenv.c -o build/temp.linux-armv7l-cpython-39/have_putenv.o -Wno-all
2023-10-22T15:28:32,183   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-39/have_putenv.o -o build/temp.linux-armv7l-cpython-39/have_putenv.bin
2023-10-22T15:28:32,278   checking whether function 'putenv' is available... yes
2023-10-22T15:28:32,281   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_strcasecmp.c -o build/temp.linux-armv7l-cpython-39/have_strcasecmp.o -Wno-all
2023-10-22T15:28:32,359   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-39/have_strcasecmp.o -o build/temp.linux-armv7l-cpython-39/have_strcasecmp.bin
2023-10-22T15:28:32,455   checking whether function 'strcasecmp' is available... yes
2023-10-22T15:28:32,457   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_strsep.c -o build/temp.linux-armv7l-cpython-39/have_strsep.o -Wno-all
2023-10-22T15:28:32,540   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-39/have_strsep.o -o build/temp.linux-armv7l-cpython-39/have_strsep.bin
2023-10-22T15:28:32,637   checking whether function 'strsep' is available... yes
2023-10-22T15:28:32,639   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_times.c -o build/temp.linux-armv7l-cpython-39/have_times.o -Wno-all
2023-10-22T15:28:32,720   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-39/have_times.o -o build/temp.linux-armv7l-cpython-39/have_times.bin
2023-10-22T15:28:32,845   checking whether function 'times' is available... yes
2023-10-22T15:28:32,848   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_getpid.c -o build/temp.linux-armv7l-cpython-39/have_getpid.o -Wno-all
2023-10-22T15:28:32,936   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-39/have_getpid.o -o build/temp.linux-armv7l-cpython-39/have_getpid.bin
2023-10-22T15:28:33,032   checking whether function 'getpid' is available... yes
2023-10-22T15:28:33,035   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_sysctl.c -o build/temp.linux-armv7l-cpython-39/have_sysctl.o -Wno-all
2023-10-22T15:28:33,091   In file included from build/temp.linux-armv7l-cpython-39/have_sysctl.c:2:
2023-10-22T15:28:33,091   /usr/include/arm-linux-gnueabihf/sys/sysctl.h:21:2: warning: #warning "The <sys/sysctl.h> header is deprecated and will be removed." [-Wcpp]
2023-10-22T15:28:33,091      21 | #warning "The <sys/sysctl.h> header is deprecated and will be removed."
2023-10-22T15:28:33,092         |  ^~~~~~~
2023-10-22T15:28:33,098   build/temp.linux-armv7l-cpython-39/have_sysctl.c: In function ‘main’:
2023-10-22T15:28:33,099   build/temp.linux-armv7l-cpython-39/have_sysctl.c:4:1: warning: ‘sysctl’ is deprecated [-Wdeprecated-declarations]
2023-10-22T15:28:33,099       4 | int main() { sysctl(NULL, 0, NULL, NULL, NULL, 0); return 0; }
2023-10-22T15:28:33,100         | ^~~
2023-10-22T15:28:33,100   In file included from build/temp.linux-armv7l-cpython-39/have_sysctl.c:2:
2023-10-22T15:28:33,100   /usr/include/arm-linux-gnueabihf/sys/sysctl.h:70:12: note: declared here
2023-10-22T15:28:33,100      70 | extern int sysctl (int *__name, int __nlen, void *__oldval,
2023-10-22T15:28:33,100         |            ^~~~~~
2023-10-22T15:28:33,135   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-39/have_sysctl.o -o build/temp.linux-armv7l-cpython-39/have_sysctl.bin
2023-10-22T15:28:33,232   checking whether function 'sysctl' is available... yes
2023-10-22T15:28:33,234   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_sysconf.c -o build/temp.linux-armv7l-cpython-39/have_sysconf.o -Wno-all
2023-10-22T15:28:33,325   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-39/have_sysconf.o -o build/temp.linux-armv7l-cpython-39/have_sysconf.bin
2023-10-22T15:28:33,421   checking whether function 'sysconf' is available... yes
2023-10-22T15:28:33,424   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_getcwd.c -o build/temp.linux-armv7l-cpython-39/have_getcwd.o -Wno-all
2023-10-22T15:28:33,513   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-39/have_getcwd.o -o build/temp.linux-armv7l-cpython-39/have_getcwd.bin
2023-10-22T15:28:33,632   checking whether function 'getcwd' is available... yes
2023-10-22T15:28:33,635   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_chmod.c -o build/temp.linux-armv7l-cpython-39/have_chmod.o -Wno-all
2023-10-22T15:28:33,723   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-39/have_chmod.o -o build/temp.linux-armv7l-cpython-39/have_chmod.bin
2023-10-22T15:28:33,819   checking whether function 'chmod' is available... yes
2023-10-22T15:28:33,822   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_stat.c -o build/temp.linux-armv7l-cpython-39/have_stat.o -Wno-all
2023-10-22T15:28:33,910   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-39/have_stat.o -o build/temp.linux-armv7l-cpython-39/have_stat.bin
2023-10-22T15:28:34,009   checking whether function 'stat' is available... yes
2023-10-22T15:28:34,012   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_fstat.c -o build/temp.linux-armv7l-cpython-39/have_fstat.o -Wno-all
2023-10-22T15:28:34,101   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-39/have_fstat.o -o build/temp.linux-armv7l-cpython-39/have_fstat.bin
2023-10-22T15:28:34,201   checking whether function 'fstat' is available... yes
2023-10-22T15:28:34,203   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_erfc.c -o build/temp.linux-armv7l-cpython-39/have_erfc.o -Wno-all
2023-10-22T15:28:34,309   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-39/have_erfc.o -o build/temp.linux-armv7l-cpython-39/have_erfc.bin
2023-10-22T15:28:34,425   checking whether function 'erfc' is available... yes
2023-10-22T15:28:34,429   generating build/temp.linux-armv7l-cpython-39/libdivsufsort.a from vendor/hmmer/libdivsufsort/divsufsort.c
2023-10-22T15:28:34,445   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/libdivsufsort/divsufsort.o from vendor/hmmer/libdivsufsort/divsufsort.c
2023-10-22T15:28:34,446   creating build/temp.linux-armv7l-cpython-39/vendor
2023-10-22T15:28:34,447   creating build/temp.linux-armv7l-cpython-39/vendor/hmmer
2023-10-22T15:28:34,448   creating build/temp.linux-armv7l-cpython-39/vendor/hmmer/libdivsufsort
2023-10-22T15:28:34,449   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/libdivsufsort/divsufsort.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/libdivsufsort/divsufsort.o
2023-10-22T15:28:38,207   arm-linux-gnueabihf-gcc-ar rcs build/temp.linux-armv7l-cpython-39/libdivsufsort.a build/temp.linux-armv7l-cpython-39/vendor/hmmer/libdivsufsort/divsufsort.o
2023-10-22T15:28:38,229   generating build/temp.linux-armv7l-cpython-39/libeasel.a from vendor/easel/esl_avx.c, vendor/easel/esl_sq.c, vendor/easel/esl_fileparser.c, vendor/easel/esl_gencode.c, vendor/easel/esl_heap.c, vendor/easel/esl_ratematrix.c, vendor/easel/esl_dmatrix.c, vendor/easel/esl_matrixops.c, vendor/easel/esl_buffer.c, vendor/easel/esl_msafile_psiblast.c, vendor/easel/esl_msafile_a2m.c, vendor/easel/esl_arr3.c, vendor/easel/esl_vectorops.c, vendor/easel/esl_rootfinder.c, vendor/easel/esl_histogram.c, vendor/easel/esl_sqio_ascii.c, vendor/easel/esl_random.c, vendor/easel/esl_msafile2.c, vendor/easel/esl_avx512.c, vendor/easel/esl_minimizer.c, vendor/easel/esl_msafile_phylip.c, vendor/easel/esl_sse.c, vendor/easel/esl_alphabet.c, vendor/easel/esl_workqueue.c, vendor/easel/esl_msacluster.c, vendor/easel/esl_tree.c, vendor/easel/esl_weibull.c, vendor/easel/esl_stack.c, vendor/easel/interface_gsl.c, vendor/easel/esl_msafile_stockholm.c, vendor/easel/esl_graph.c, vendor/easel/esl_distance.c, vendor/easel/esl_neon.c, vendor/easel/esl_dsqdata.c, vendor/easel/esl_normal.c, vendor/easel/esl_cluster.c, vendor/easel/esl_msafile.c, vendor/easel/esl_threads.c, vendor/easel/esl_hmm.c, vendor/easel/easel.c, vendor/easel/esl_msaweight.c, vendor/easel/esl_mem.c, vendor/easel/esl_rand64.c, vendor/easel/esl_gev.c, vendor/easel/esl_msafile_selex.c, vendor/easel/esl_recorder.c, vendor/easel/esl_mpi.c, vendor/easel/esl_gumbel.c, vendor/easel/esl_msashuffle.c, vendor/easel/esl_quicksort.c, vendor/easel/esl_json.c, vendor/easel/esl_vmx.c, vendor/easel/esl_arr2.c, vendor/easel/esl_dirichlet.c, vendor/easel/esl_msafile_afa.c, vendor/easel/esl_lognormal.c, vendor/easel/esl_red_black.c, vendor/easel/esl_gamma.c, vendor/easel/esl_bitfield.c, vendor/easel/interface_lapack.c, vendor/easel/esl_ssi.c, vendor/easel/esl_stats.c, vendor/easel/esl_composition.c, vendor/easel/esl_swat.c, vendor/easel/esl_stretchexp.c, vendor/easel/esl_randomseq.c, vendor/easel/esl_mixgev.c, vendor/easel/esl_cpu.c, vendor/easel/esl_paml.c, vendor/easel/esl_wuss.c, vendor/easel/esl_scorematrix.c, vendor/easel/esl_msafile_clustal.c, vendor/easel/esl_regexp.c, vendor/easel/esl_iset.c, vendor/easel/esl_stopwatch.c, vendor/easel/esl_huffman.c, vendor/easel/esl_getopts.c, vendor/easel/esl_msa.c, vendor/easel/esl_exponential.c, vendor/easel/esl_alloc.c, vendor/easel/esl_sqio_ncbi.c, vendor/easel/esl_subcmd.c, vendor/easel/esl_keyhash.c, vendor/easel/esl_hyperexp.c, vendor/easel/esl_mixdchlet.c, vendor/easel/esl_varint.c, vendor/easel/esl_sqio.c
2023-10-22T15:28:38,229   generating build/temp.linux-armv7l-cpython-39/esl_sqio_ascii.c from vendor/easel/esl_sqio_ascii.c
2023-10-22T15:28:38,242   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_avx.o from vendor/easel/esl_avx.c
2023-10-22T15:28:38,242   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_minimizer.o from vendor/easel/esl_minimizer.c
2023-10-22T15:28:38,243   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_vectorops.o from vendor/easel/esl_vectorops.c
2023-10-22T15:28:38,243   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_dmatrix.o from vendor/easel/esl_dmatrix.c
2023-10-22T15:28:38,243   creating build/temp.linux-armv7l-cpython-39/vendor/easel
2023-10-22T15:28:38,244   creating build/temp.linux-armv7l-cpython-39/vendor/easel
2023-10-22T15:28:38,245   creating build/temp.linux-armv7l-cpython-39/vendor/easel
2023-10-22T15:28:38,245   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_minimizer.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_minimizer.o
2023-10-22T15:28:38,246   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_dmatrix.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_dmatrix.o
2023-10-22T15:28:38,246   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_vectorops.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_vectorops.o
2023-10-22T15:28:38,247   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_avx.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_avx.o
2023-10-22T15:28:38,416   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_sq.o from vendor/easel/esl_sq.c
2023-10-22T15:28:38,417   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_sq.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_sq.o
2023-10-22T15:28:38,606   vendor/easel/esl_minimizer.c: In function ‘esl_min_ConjugateGradientDescent’:
2023-10-22T15:28:38,607   vendor/easel/esl_minimizer.c:243:23: warning: ‘fx’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T15:28:38,608     243 |   if (opt_fx) *opt_fx = fx;
2023-10-22T15:28:38,608         |               ~~~~~~~~^~~~
2023-10-22T15:28:38,609   vendor/easel/esl_minimizer.c:720:21: warning: ‘cx’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T15:28:38,609     720 |       m   = 0.5 * (a+b);
2023-10-22T15:28:38,610         |                   ~~^~~
2023-10-22T15:28:38,610   vendor/easel/esl_minimizer.c:118:16: note: ‘cx’ was declared here
2023-10-22T15:28:38,611     118 |   double ax,bx,cx;
2023-10-22T15:28:38,611         |                ^~
2023-10-22T15:28:38,612   vendor/easel/esl_minimizer.c:720:21: warning: ‘ax’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T15:28:38,612     720 |       m   = 0.5 * (a+b);
2023-10-22T15:28:38,613         |                   ~~^~~
2023-10-22T15:28:38,613   vendor/easel/esl_minimizer.c:118:10: note: ‘ax’ was declared here
2023-10-22T15:28:38,614     118 |   double ax,bx,cx;
2023-10-22T15:28:38,614         |          ^~
2023-10-22T15:28:38,636   vendor/easel/esl_sq.c: In function ‘esl_sq_Checksum’:
2023-10-22T15:28:38,636   vendor/easel/esl_sq.c:1638:25: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int64_t’ {aka ‘const long long int’} [-Wsign-compare]
2023-10-22T15:28:38,637    1638 |       for (pos = 0; pos < sq->n; pos++)
2023-10-22T15:28:38,637         |                         ^
2023-10-22T15:28:38,637   vendor/easel/esl_sq.c:1647:25: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int64_t’ {aka ‘const long long int’} [-Wsign-compare]
2023-10-22T15:28:38,638    1647 |       for (pos = 1; pos <= sq->n; pos++)
2023-10-22T15:28:38,638         |                         ^~
2023-10-22T15:28:39,162   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msafile_phylip.o from vendor/easel/esl_msafile_phylip.c
2023-10-22T15:28:39,163   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_msafile_phylip.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msafile_phylip.o
2023-10-22T15:28:39,884   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_matrixops.o from vendor/easel/esl_matrixops.c
2023-10-22T15:28:39,885   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_matrixops.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_matrixops.o
2023-10-22T15:28:40,687   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_buffer.o from vendor/easel/esl_buffer.c
2023-10-22T15:28:40,688   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_buffer.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_buffer.o
2023-10-22T15:28:40,794   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_rootfinder.o from vendor/easel/esl_rootfinder.c
2023-10-22T15:28:40,795   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_rootfinder.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_rootfinder.o
2023-10-22T15:28:41,034   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_sse.o from vendor/easel/esl_sse.c
2023-10-22T15:28:41,034   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_sse.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_sse.o
2023-10-22T15:28:41,143   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_alphabet.o from vendor/easel/esl_alphabet.c
2023-10-22T15:28:41,143   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_alphabet.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_alphabet.o
2023-10-22T15:28:41,209   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_fileparser.o from vendor/easel/esl_fileparser.c
2023-10-22T15:28:41,210   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_fileparser.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_fileparser.o
2023-10-22T15:28:41,220   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_histogram.o from vendor/easel/esl_histogram.c
2023-10-22T15:28:41,221   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_histogram.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_histogram.o
2023-10-22T15:28:41,306   vendor/easel/esl_alphabet.c: In function ‘esl_alphabet_CreateCustom’:
2023-10-22T15:28:41,308   vendor/easel/esl_alphabet.c:107:24: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:28:41,308     107 |   if (strlen(alphabet) != Kp) ESL_XEXCEPTION(eslEINVAL, "alphabet length != Kp");
2023-10-22T15:28:41,308         |                        ^~
2023-10-22T15:28:41,405   vendor/easel/esl_histogram.c: In function ‘esl_histogram_GetRank’:
2023-10-22T15:28:41,405   vendor/easel/esl_histogram.c:541:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:28:41,405     541 |   if (rank > h->n)
2023-10-22T15:28:41,406         |            ^
2023-10-22T15:28:41,720   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_gencode.o from vendor/easel/esl_gencode.c
2023-10-22T15:28:41,721   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_gencode.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_gencode.o
2023-10-22T15:28:42,325   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msafile_psiblast.o from vendor/easel/esl_msafile_psiblast.c
2023-10-22T15:28:42,326   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_msafile_psiblast.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msafile_psiblast.o
2023-10-22T15:28:42,816   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_random.o from vendor/easel/esl_random.c
2023-10-22T15:28:42,817   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_random.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_random.o
2023-10-22T15:28:42,836   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_workqueue.o from vendor/easel/esl_workqueue.c
2023-10-22T15:28:42,836   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_workqueue.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_workqueue.o
2023-10-22T15:28:42,921   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msacluster.o from vendor/easel/esl_msacluster.c
2023-10-22T15:28:42,922   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_msacluster.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msacluster.o
2023-10-22T15:28:43,006   vendor/easel/esl_random.c: In function ‘esl_rnd_Roll’:
2023-10-22T15:28:43,008   vendor/easel/esl_random.c:319:54: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:28:43,008     319 |   do { u = esl_random_uint32(r) / factor; } while (u >= n);
2023-10-22T15:28:43,008         |                                                      ^~
2023-10-22T15:28:43,013   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_heap.o from vendor/easel/esl_heap.c
2023-10-22T15:28:43,014   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_heap.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_heap.o
2023-10-22T15:28:43,014   vendor/easel/esl_random.c: In function ‘gamma_integer’:
2023-10-22T15:28:43,015   vendor/easel/esl_random.c:655:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-10-22T15:28:43,015     655 |   for (i = 0; i < a; i++)
2023-10-22T15:28:43,015         |                 ^
2023-10-22T15:28:43,249   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msafile_a2m.o from vendor/easel/esl_msafile_a2m.c
2023-10-22T15:28:43,251   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_msafile_a2m.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msafile_a2m.o
2023-10-22T15:28:43,286   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_tree.o from vendor/easel/esl_tree.c
2023-10-22T15:28:43,287   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_tree.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_tree.o
2023-10-22T15:28:43,418   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_ratematrix.o from vendor/easel/esl_ratematrix.c
2023-10-22T15:28:43,419   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_ratematrix.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_ratematrix.o
2023-10-22T15:28:43,674   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msafile2.o from vendor/easel/esl_msafile2.c
2023-10-22T15:28:43,675   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_msafile2.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msafile2.o
2023-10-22T15:28:43,877   In file included from vendor/easel/esl_msafile2.c:26:
2023-10-22T15:28:43,877   vendor/easel/esl_msafile2.c: In function ‘esl_msafile2_ReadInfoPfam’:
2023-10-22T15:28:43,878   vendor/easel/easel.h:432:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:43,878     432 | #define ESL_MAX(a,b)          (((a)>(b))?(a):(b))
2023-10-22T15:28:43,878         |                                    ^
2023-10-22T15:28:43,878   vendor/easel/esl_msafile2.c:632:43: note: in expansion of macro ‘ESL_MAX’
2023-10-22T15:28:43,879     632 |     for(i = 0; i < msa->ngc; i++) maxgc = ESL_MAX(maxgc, strlen(msa->gc_tag[i]));
2023-10-22T15:28:43,879         |                                           ^~~~~~~
2023-10-22T15:28:43,879   vendor/easel/easel.h:432:42: warning: operand of ‘?:’ changes signedness from ‘int’ to ‘size_t’ {aka ‘unsigned int’} due to unsignedness of other operand [-Wsign-compare]
2023-10-22T15:28:43,880     432 | #define ESL_MAX(a,b)          (((a)>(b))?(a):(b))
2023-10-22T15:28:43,880         |                                          ^~~
2023-10-22T15:28:43,880   vendor/easel/esl_msafile2.c:632:43: note: in expansion of macro ‘ESL_MAX’
2023-10-22T15:28:43,880     632 |     for(i = 0; i < msa->ngc; i++) maxgc = ESL_MAX(maxgc, strlen(msa->gc_tag[i]));
2023-10-22T15:28:43,881         |                                           ^~~~~~~
2023-10-22T15:28:43,881   vendor/easel/easel.h:432:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:43,881     432 | #define ESL_MAX(a,b)          (((a)>(b))?(a):(b))
2023-10-22T15:28:43,882         |                                    ^
2023-10-22T15:28:43,882   vendor/easel/esl_msafile2.c:641:43: note: in expansion of macro ‘ESL_MAX’
2023-10-22T15:28:43,882     641 |     for(i = 0; i < msa->ngf; i++) maxgf = ESL_MAX(maxgf, strlen(msa->gf_tag[i]));
2023-10-22T15:28:43,882         |                                           ^~~~~~~
2023-10-22T15:28:43,883   vendor/easel/easel.h:432:42: warning: operand of ‘?:’ changes signedness from ‘int’ to ‘size_t’ {aka ‘unsigned int’} due to unsignedness of other operand [-Wsign-compare]
2023-10-22T15:28:43,883     432 | #define ESL_MAX(a,b)          (((a)>(b))?(a):(b))
2023-10-22T15:28:43,883         |                                          ^~~
2023-10-22T15:28:43,883   vendor/easel/esl_msafile2.c:641:43: note: in expansion of macro ‘ESL_MAX’
2023-10-22T15:28:43,884     641 |     for(i = 0; i < msa->ngf; i++) maxgf = ESL_MAX(maxgf, strlen(msa->gf_tag[i]));
2023-10-22T15:28:43,884         |                                           ^~~~~~~
2023-10-22T15:28:44,162   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_distance.o from vendor/easel/esl_distance.c
2023-10-22T15:28:44,163   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_distance.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_distance.o
2023-10-22T15:28:44,780   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_arr3.o from vendor/easel/esl_arr3.c
2023-10-22T15:28:44,781   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_arr3.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_arr3.o
2023-10-22T15:28:45,054   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_threads.o from vendor/easel/esl_threads.c
2023-10-22T15:28:45,055   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_threads.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_threads.o
2023-10-22T15:28:45,141   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_hmm.o from vendor/easel/esl_hmm.c
2023-10-22T15:28:45,142   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_hmm.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_hmm.o
2023-10-22T15:28:45,330   In file included from vendor/easel/esl_hmm.c:9:
2023-10-22T15:28:45,330   vendor/easel/esl_hmm.c: In function ‘esl_hmx_GrowTo’:
2023-10-22T15:28:45,331   vendor/easel/easel.h:431:36: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:28:45,331     431 | #define ESL_MIN(a,b)          (((a)<(b))?(a):(b))
2023-10-22T15:28:45,332         |                                    ^
2023-10-22T15:28:45,332   vendor/easel/esl_hmm.c:265:20: note: in expansion of macro ‘ESL_MIN’
2023-10-22T15:28:45,332     265 |       mx->validR = ESL_MIN(mx->ncells / mx->allocM, mx->allocR);
2023-10-22T15:28:45,333         |                    ^~~~~~~
2023-10-22T15:28:45,333   vendor/easel/easel.h:431:46: warning: operand of ‘?:’ changes signedness from ‘int’ to ‘uint64_t’ {aka ‘long long unsigned int’} due to unsignedness of other operand [-Wsign-compare]
2023-10-22T15:28:45,334     431 | #define ESL_MIN(a,b)          (((a)<(b))?(a):(b))
2023-10-22T15:28:45,334         |                                              ^~~
2023-10-22T15:28:45,335   vendor/easel/esl_hmm.c:265:20: note: in expansion of macro ‘ESL_MIN’
2023-10-22T15:28:45,335     265 |       mx->validR = ESL_MIN(mx->ncells / mx->allocM, mx->allocR);
2023-10-22T15:28:45,335         |                    ^~~~~~~
2023-10-22T15:28:45,725   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_neon.o from vendor/easel/esl_neon.c
2023-10-22T15:28:45,726   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_neon.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_neon.o
2023-10-22T15:28:46,268   generating build/temp.linux-armv7l-cpython-39/vendor/easel/easel.o from vendor/easel/easel.c
2023-10-22T15:28:46,270   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/easel.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/easel.o
2023-10-22T15:28:46,278   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_weibull.o from vendor/easel/esl_weibull.c
2023-10-22T15:28:46,280   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_weibull.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_weibull.o
2023-10-22T15:28:46,508   vendor/easel/easel.c: In function ‘esl_FileNewSuffix’:
2023-10-22T15:28:46,509   vendor/easel/easel.c:1942:46: warning: operand of ‘?:’ changes signedness from ‘int’ to ‘size_t’ {aka ‘unsigned int’} due to unsignedness of other operand [-Wsign-compare]
2023-10-22T15:28:46,510    1942 |   nf = (lastdot == NULL)? strlen(filename) : lastdot-filename;
2023-10-22T15:28:46,510         |                                              ^~~~~~~~~~~~~~~~
2023-10-22T15:28:46,541   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_dsqdata.o from vendor/easel/esl_dsqdata.c
2023-10-22T15:28:46,542   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_dsqdata.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_dsqdata.o
2023-10-22T15:28:46,598   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_avx512.o from vendor/easel/esl_avx512.c
2023-10-22T15:28:46,599   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_avx512.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_avx512.o
2023-10-22T15:28:46,731   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_gev.o from vendor/easel/esl_gev.c
2023-10-22T15:28:46,732   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_gev.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_gev.o
2023-10-22T15:28:46,752   vendor/easel/esl_dsqdata.c: In function ‘esl_dsqdata_Open’:
2023-10-22T15:28:46,753   vendor/easel/esl_dsqdata.c:255:21: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:28:46,753     255 |       if (alphatype != dd->abc_r->type)
2023-10-22T15:28:46,754         |                     ^~
2023-10-22T15:28:46,765   vendor/easel/esl_dsqdata.c: In function ‘esl_dsqdata_Write’:
2023-10-22T15:28:46,765   vendor/easel/esl_dsqdata.c:617:17: warning: comparison of integer expressions of different signedness: ‘int64_t’ {aka ‘long long int’} and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:28:46,765     617 |       if (sq->n > max_seqlen) max_seqlen = sq->n;
2023-10-22T15:28:46,766         |                 ^
2023-10-22T15:28:46,766   vendor/easel/esl_dsqdata.c:618:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:46,766     618 |       n = strlen(sq->name); if (n > max_namelen) max_namelen = n;
2023-10-22T15:28:46,767         |                                   ^
2023-10-22T15:28:46,767   vendor/easel/esl_dsqdata.c:619:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:46,767     619 |       n = strlen(sq->acc);  if (n > max_acclen)  max_acclen  = n;
2023-10-22T15:28:46,768         |                                   ^
2023-10-22T15:28:46,768   vendor/easel/esl_dsqdata.c:620:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:46,768     620 |       n = strlen(sq->desc); if (n > max_desclen) max_desclen = n;
2023-10-22T15:28:46,768         |                                   ^
2023-10-22T15:28:46,771   vendor/easel/esl_dsqdata.c:677:53: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:28:46,771     677 |       if ( fwrite(psq, sizeof(uint32_t), plen, sfp) != plen)
2023-10-22T15:28:46,772         |                                                     ^~
2023-10-22T15:28:46,772   vendor/easel/esl_dsqdata.c:683:53: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:28:46,772     683 |       if ( fwrite(sq->name, sizeof(char), n+1, mfp) != n+1)
2023-10-22T15:28:46,772         |                                                     ^~
2023-10-22T15:28:46,773   vendor/easel/esl_dsqdata.c:688:53: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:28:46,773     688 |       if ( fwrite(sq->acc,  sizeof(char), n+1, mfp) != n+1)
2023-10-22T15:28:46,773         |                                                     ^~
2023-10-22T15:28:46,774   vendor/easel/esl_dsqdata.c:693:53: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:28:46,774     693 |       if ( fwrite(sq->desc, sizeof(char), n+1, mfp) != n+1)
2023-10-22T15:28:46,774         |                                                     ^~
2023-10-22T15:28:46,807   vendor/easel/esl_dsqdata.c: In function ‘dsqdata_unpacker_thread’:
2023-10-22T15:28:46,807   vendor/easel/esl_dsqdata.c:1130:1: warning: control reaches end of non-void function [-Wreturn-type]
2023-10-22T15:28:46,808    1130 | }
2023-10-22T15:28:46,808         | ^
2023-10-22T15:28:46,814   vendor/easel/esl_dsqdata.c: In function ‘dsqdata_loader_thread’:
2023-10-22T15:28:46,815   vendor/easel/esl_dsqdata.c:1053:1: warning: control reaches end of non-void function [-Wreturn-type]
2023-10-22T15:28:46,815    1053 | }
2023-10-22T15:28:46,815         | ^
2023-10-22T15:28:46,909   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_stack.o from vendor/easel/esl_stack.c
2023-10-22T15:28:46,909   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_stack.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_stack.o
2023-10-22T15:28:47,355   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msafile_selex.o from vendor/easel/esl_msafile_selex.c
2023-10-22T15:28:47,356   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_msafile_selex.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msafile_selex.o
2023-10-22T15:28:47,439   generating build/temp.linux-armv7l-cpython-39/vendor/easel/interface_gsl.o from vendor/easel/interface_gsl.c
2023-10-22T15:28:47,440   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/interface_gsl.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/interface_gsl.o
2023-10-22T15:28:47,531   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msafile_stockholm.o from vendor/easel/esl_msafile_stockholm.c
2023-10-22T15:28:47,532   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_msafile_stockholm.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msafile_stockholm.o
2023-10-22T15:28:47,839   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msaweight.o from vendor/easel/esl_msaweight.c
2023-10-22T15:28:47,840   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_msaweight.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msaweight.o
2023-10-22T15:28:48,174   vendor/easel/esl_msafile_selex.c: In function ‘esl_msafile_selex_Read’:
2023-10-22T15:28:48,174   vendor/easel/esl_msafile_selex.c:722:71: warning: ‘p’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T15:28:48,175     722 |    for (alen = msa->alen+nleft+ntext; alen < msa->alen+nadd; alen++) p[alen] = '.';
2023-10-22T15:28:48,175         |                                                                       ^
2023-10-22T15:28:48,176   vendor/easel/esl_msafile_selex.c:645:13: note: ‘p’ was declared here
2023-10-22T15:28:48,176     645 |   char     *p;
2023-10-22T15:28:48,177         |             ^
2023-10-22T15:28:48,764   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_normal.o from vendor/easel/esl_normal.c
2023-10-22T15:28:48,765   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_normal.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_normal.o
2023-10-22T15:28:49,021   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_cluster.o from vendor/easel/esl_cluster.c
2023-10-22T15:28:49,022   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_cluster.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_cluster.o
2023-10-22T15:28:49,168   vendor/easel/esl_cluster.c: In function ‘esl_cluster_SingleLinkage’:
2023-10-22T15:28:49,169   vendor/easel/esl_cluster.c:151:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:49,169     151 |    for (v = 0; v < n; v++) a[v] = n-v-1; /* initialize by pushing all vertices onto available list (backwards) */
2023-10-22T15:28:49,169         |                  ^
2023-10-22T15:28:49,290   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msafile.o from vendor/easel/esl_msafile.c
2023-10-22T15:28:49,292   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_msafile.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msafile.o
2023-10-22T15:28:49,410   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_recorder.o from vendor/easel/esl_recorder.c
2023-10-22T15:28:49,411   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_recorder.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_recorder.o
2023-10-22T15:28:49,628   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_mem.o from vendor/easel/esl_mem.c
2023-10-22T15:28:49,629   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_mem.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_mem.o
2023-10-22T15:28:50,067   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_mpi.o from vendor/easel/esl_mpi.c
2023-10-22T15:28:50,068   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_mpi.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_mpi.o
2023-10-22T15:28:50,272   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_gumbel.o from vendor/easel/esl_gumbel.c
2023-10-22T15:28:50,273   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_gumbel.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_gumbel.o
2023-10-22T15:28:50,448   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_quicksort.o from vendor/easel/esl_quicksort.c
2023-10-22T15:28:50,449   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_quicksort.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_quicksort.o
2023-10-22T15:28:50,739   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_json.o from vendor/easel/esl_json.c
2023-10-22T15:28:50,740   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_json.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_json.o
2023-10-22T15:28:50,801   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_graph.o from vendor/easel/esl_graph.c
2023-10-22T15:28:50,802   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_graph.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_graph.o
2023-10-22T15:28:51,047   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_rand64.o from vendor/easel/esl_rand64.c
2023-10-22T15:28:51,048   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_rand64.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_rand64.o
2023-10-22T15:28:51,091   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msashuffle.o from vendor/easel/esl_msashuffle.c
2023-10-22T15:28:51,092   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_msashuffle.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msashuffle.o
2023-10-22T15:28:51,208   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_lognormal.o from vendor/easel/esl_lognormal.c
2023-10-22T15:28:51,209   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_lognormal.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_lognormal.o
2023-10-22T15:28:51,268   vendor/easel/esl_msashuffle.c: In function ‘esl_msashuffle_CQRNA’:
2023-10-22T15:28:51,268   vendor/easel/esl_msashuffle.c:449:17: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:28:51,268     449 |   if (strlen(y) != L) ESL_XEXCEPTION(eslEINVAL, "sequences of different lengths in qrna shuffle");
2023-10-22T15:28:51,269         |                 ^~
2023-10-22T15:28:51,549   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_red_black.o from vendor/easel/esl_red_black.c
2023-10-22T15:28:51,550   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_red_black.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_red_black.o
2023-10-22T15:28:51,728   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_stats.o from vendor/easel/esl_stats.c
2023-10-22T15:28:51,729   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_stats.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_stats.o
2023-10-22T15:28:52,001   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_cpu.o from vendor/easel/esl_cpu.c
2023-10-22T15:28:52,003   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_cpu.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_cpu.o
2023-10-22T15:28:52,050   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_gamma.o from vendor/easel/esl_gamma.c
2023-10-22T15:28:52,050   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_gamma.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_gamma.o
2023-10-22T15:28:52,216   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_paml.o from vendor/easel/esl_paml.c
2023-10-22T15:28:52,217   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_paml.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_paml.o
2023-10-22T15:28:52,509   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_wuss.o from vendor/easel/esl_wuss.c
2023-10-22T15:28:52,510   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_wuss.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_wuss.o
2023-10-22T15:28:52,606   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_composition.o from vendor/easel/esl_composition.c
2023-10-22T15:28:52,608   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_composition.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_composition.o
2023-10-22T15:28:52,671   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_vmx.o from vendor/easel/esl_vmx.c
2023-10-22T15:28:52,672   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_vmx.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_vmx.o
2023-10-22T15:28:52,774   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_arr2.o from vendor/easel/esl_arr2.c
2023-10-22T15:28:52,775   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_arr2.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_arr2.o
2023-10-22T15:28:52,825   vendor/easel/esl_wuss.c: In function ‘esl_wuss2ct’:
2023-10-22T15:28:52,826   vendor/easel/esl_wuss.c:136:10: warning: ‘status’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T15:28:52,826     136 |   return status;
2023-10-22T15:28:52,826         |          ^~~~~~
2023-10-22T15:28:52,851   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_bitfield.o from vendor/easel/esl_bitfield.c
2023-10-22T15:28:52,852   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_bitfield.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_bitfield.o
2023-10-22T15:28:52,893   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_swat.o from vendor/easel/esl_swat.c
2023-10-22T15:28:52,894   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_swat.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_swat.o
2023-10-22T15:28:53,026   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_dirichlet.o from vendor/easel/esl_dirichlet.c
2023-10-22T15:28:53,028   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_dirichlet.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_dirichlet.o
2023-10-22T15:28:53,134   generating build/temp.linux-armv7l-cpython-39/vendor/easel/interface_lapack.o from vendor/easel/interface_lapack.c
2023-10-22T15:28:53,135   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/interface_lapack.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/interface_lapack.o
2023-10-22T15:28:53,222   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_ssi.o from vendor/easel/esl_ssi.c
2023-10-22T15:28:53,223   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_ssi.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_ssi.o
2023-10-22T15:28:53,306   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_stretchexp.o from vendor/easel/esl_stretchexp.c
2023-10-22T15:28:53,308   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_stretchexp.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_stretchexp.o
2023-10-22T15:28:53,395   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msafile_afa.o from vendor/easel/esl_msafile_afa.c
2023-10-22T15:28:53,396   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_msafile_afa.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msafile_afa.o
2023-10-22T15:28:53,398   vendor/easel/esl_ssi.c: In function ‘esl_ssi_FindNumber’:
2023-10-22T15:28:53,399   vendor/easel/esl_ssi.c:261:12: warning: comparison of integer expressions of different signedness: ‘int64_t’ {aka ‘long long int’} and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:28:53,399     261 |   if (nkey >= ssi->nprimary) { status = eslENOTFOUND; goto ERROR; }
2023-10-22T15:28:53,399         |            ^~
2023-10-22T15:28:53,411   vendor/easel/esl_ssi.c: In function ‘esl_newssi_AddFile’:
2023-10-22T15:28:53,412   vendor/easel/esl_ssi.c:728:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:53,413     728 |   if ((n+1) > ns->flen) ns->flen = n+1;
2023-10-22T15:28:53,413         |             ^
2023-10-22T15:28:53,418   vendor/easel/esl_ssi.c: In function ‘esl_newssi_AddKey’:
2023-10-22T15:28:53,419   vendor/easel/esl_ssi.c:862:9: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:53,419     862 |   if (n > ns->plen) ns->plen = n;
2023-10-22T15:28:53,419         |         ^
2023-10-22T15:28:53,422   vendor/easel/esl_ssi.c:893:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:28:53,423     893 |  for (i = ns->nprimary; i < ns->nprimary + eslSSI_KCHUNK; i++)
2023-10-22T15:28:53,423         |                           ^
2023-10-22T15:28:53,425   vendor/easel/esl_ssi.c: In function ‘esl_newssi_AddAlias’:
2023-10-22T15:28:53,426   vendor/easel/esl_ssi.c:941:9: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:53,426     941 |   if (n > ns->slen) ns->slen = n;
2023-10-22T15:28:53,426         |         ^
2023-10-22T15:28:53,429   vendor/easel/esl_ssi.c:957:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:28:53,430     957 |  for (i = ns->nsecondary; i < ns->nsecondary+eslSSI_KCHUNK; i++) {
2023-10-22T15:28:53,430         |                             ^
2023-10-22T15:28:53,436   vendor/easel/esl_ssi.c: In function ‘esl_newssi_Write’:
2023-10-22T15:28:53,437   vendor/easel/esl_ssi.c:1143:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:28:53,438    1143 |       for (i = 0; i < ns->nprimary; i++)
2023-10-22T15:28:53,438         |                     ^
2023-10-22T15:28:53,441   vendor/easel/esl_ssi.c:1161:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:28:53,441    1161 |       for (i = 0; i < ns->nprimary; i++)
2023-10-22T15:28:53,441         |                     ^
2023-10-22T15:28:53,444   vendor/easel/esl_ssi.c:1181:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:28:53,444    1181 |       for (i = 0; i < ns->nsecondary; i++)
2023-10-22T15:28:53,444         |                     ^
2023-10-22T15:28:53,447   vendor/easel/esl_ssi.c:1198:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:28:53,447    1198 |       for (i = 0; i < ns->nsecondary; i++)
2023-10-22T15:28:53,447         |                     ^
2023-10-22T15:28:53,452   vendor/easel/esl_ssi.c: In function ‘esl_newssi_Close’:
2023-10-22T15:28:53,453   vendor/easel/esl_ssi.c:1247:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:28:53,453    1247 |    for (i = 0; i < ns->nprimary; i++)
2023-10-22T15:28:53,454         |                  ^
2023-10-22T15:28:53,456   vendor/easel/esl_ssi.c:1253:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:28:53,456    1253 |    for (i = 0; i < ns->nsecondary; i++)
2023-10-22T15:28:53,456         |                  ^
2023-10-22T15:28:53,462   vendor/easel/esl_ssi.c: In function ‘activate_external_sort’:
2023-10-22T15:28:53,463   vendor/easel/esl_ssi.c:1345:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:28:53,464    1345 |   for (i = 0; i < ns->nprimary; i++) {
2023-10-22T15:28:53,464         |                 ^
2023-10-22T15:28:53,466   vendor/easel/esl_ssi.c:1364:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:28:53,466    1364 |   for (i = 0; i < ns->nsecondary; i++)
2023-10-22T15:28:53,467         |                 ^
2023-10-22T15:28:53,469   vendor/easel/esl_ssi.c:1370:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:28:53,469    1370 |   for (i = 0; i < ns->nprimary;   i++) free(ns->pkeys[i].key);
2023-10-22T15:28:53,469         |                 ^
2023-10-22T15:28:53,471   vendor/easel/esl_ssi.c:1371:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:28:53,471    1371 |   for (i = 0; i < ns->nsecondary; i++) free(ns->skeys[i].key);
2023-10-22T15:28:53,472         |                 ^
2023-10-22T15:28:53,473   vendor/easel/esl_ssi.c:1372:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:28:53,474    1372 |   for (i = 0; i < ns->nsecondary; i++) free(ns->skeys[i].pkey);
2023-10-22T15:28:53,474         |                 ^
2023-10-22T15:28:53,609   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_scorematrix.o from vendor/easel/esl_scorematrix.c
2023-10-22T15:28:53,610   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_scorematrix.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_scorematrix.o
2023-10-22T15:28:53,914   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_randomseq.o from vendor/easel/esl_randomseq.c
2023-10-22T15:28:53,915   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_randomseq.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_randomseq.o
2023-10-22T15:28:54,021   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_iset.o from vendor/easel/esl_iset.c
2023-10-22T15:28:54,022   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_iset.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_iset.o
2023-10-22T15:28:54,171   vendor/easel/esl_iset.c: In function ‘esl_iset_monoCobalt’:
2023-10-22T15:28:54,172   vendor/easel/esl_iset.c:127:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:54,172     127 |   for (v = 0; v < n; v++) a[v] = n-v-1; // initialize by putting all vertices into array a
2023-10-22T15:28:54,173         |                 ^
2023-10-22T15:28:54,173   vendor/easel/esl_iset.c:131:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:54,174     131 |   for (j = 0; j < n; j++)
2023-10-22T15:28:54,174         |                 ^
2023-10-22T15:28:54,174   vendor/easel/esl_iset.c:135:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:54,174     135 |       for (i = n; i < n+nb; i++)
2023-10-22T15:28:54,175         |                     ^
2023-10-22T15:28:54,175   vendor/easel/esl_iset.c: In function ‘esl_iset_biCobalt’:
2023-10-22T15:28:54,175   vendor/easel/esl_iset.c:209:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:54,176     209 |   for (v = 0; v < n; v++) a[v] = n-v-1;   // initialize by putting all vertices into an array
2023-10-22T15:28:54,176         |                 ^
2023-10-22T15:28:54,176   vendor/easel/esl_iset.c:213:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:54,177     213 |   for (j = 0; j <n; j++)
2023-10-22T15:28:54,177         |                 ^
2023-10-22T15:28:54,177   vendor/easel/esl_iset.c:220:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:54,177     220 |           for (i = n; i < n+nb1; i++)
2023-10-22T15:28:54,178         |                         ^
2023-10-22T15:28:54,178   vendor/easel/esl_iset.c:229:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:54,178     229 |               for (i = 2*n; i < 2*n+nb2; i++)
2023-10-22T15:28:54,179         |                               ^
2023-10-22T15:28:54,179   vendor/easel/esl_iset.c:253:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:54,179     253 |           for (i = 2*n; i < 2*n+nb2; i++)
2023-10-22T15:28:54,179         |                           ^
2023-10-22T15:28:54,180   vendor/easel/esl_iset.c:262:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:54,180     262 |               for (i = n; i < n+nb1; i++)
2023-10-22T15:28:54,180         |                             ^
2023-10-22T15:28:54,180   vendor/easel/esl_iset.c:287:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:54,181     287 |       for (i = 0; i < n; i++)
2023-10-22T15:28:54,181         |                     ^
2023-10-22T15:28:54,186   vendor/easel/esl_iset.c: In function ‘esl_iset_monoBlue’:
2023-10-22T15:28:54,186   vendor/easel/esl_iset.c:809:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:54,186     809 |   for (i = 0; i < n; i++)
2023-10-22T15:28:54,187         |                 ^
2023-10-22T15:28:54,187   vendor/easel/esl_iset.c: In function ‘esl_iset_biBlue’:
2023-10-22T15:28:54,193   vendor/easel/esl_iset.c:1011:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:54,193    1011 |   for (i = 0; i < n; i++)
2023-10-22T15:28:54,193         |                 ^
2023-10-22T15:28:54,194   vendor/easel/esl_iset.c:1018:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:54,194    1018 |   for (i = 0; i < n; i++)  elig[i]=3;
2023-10-22T15:28:54,194         |                 ^
2023-10-22T15:28:54,194   vendor/easel/esl_iset.c:1033:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:54,194    1033 |       for (i = 0; i < n; i++)
2023-10-22T15:28:54,195         |                     ^
2023-10-22T15:28:54,195   vendor/easel/esl_iset.c: In function ‘esl_iset_biRandom’:
2023-10-22T15:28:54,195   vendor/easel/esl_iset.c:1089:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:54,195    1089 |   for (i = 0; i < n; i++)
2023-10-22T15:28:54,196         |                 ^
2023-10-22T15:28:54,196   vendor/easel/esl_iset.c:1095:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:54,196    1095 |   for (i = 0; i < n; i++)
2023-10-22T15:28:54,196         |                 ^
2023-10-22T15:28:54,197   vendor/easel/esl_iset.c:1100:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:54,197    1100 |           for (j = 0; j < n; j++)
2023-10-22T15:28:54,197         |                         ^
2023-10-22T15:28:54,197   vendor/easel/esl_iset.c: In function ‘esl_iset_monoValidate’:
2023-10-22T15:28:54,198   vendor/easel/esl_iset.c:1173:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:54,198    1173 |    for (i = 0; i < n; i++)
2023-10-22T15:28:54,198         |                  ^
2023-10-22T15:28:54,198   vendor/easel/esl_iset.c:1175:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:54,199    1175 |        for (j = i+1; j < n; j++)
2023-10-22T15:28:54,199         |                        ^
2023-10-22T15:28:54,199   vendor/easel/esl_iset.c: In function ‘esl_iset_biValidate’:
2023-10-22T15:28:54,199   vendor/easel/esl_iset.c:1218:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:54,199    1218 |    for (i = 0; i < n; i++)
2023-10-22T15:28:54,200         |                  ^
2023-10-22T15:28:54,200   vendor/easel/esl_iset.c:1220:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:54,200    1220 |        for (j = i+1; j < n; j++)
2023-10-22T15:28:54,201         |                        ^
2023-10-22T15:28:54,202   vendor/easel/esl_iset.c:1230:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:54,202    1230 |    for (i = 0; i < n; i++)
2023-10-22T15:28:54,202         |                  ^
2023-10-22T15:28:55,313   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_stopwatch.o from vendor/easel/esl_stopwatch.c
2023-10-22T15:28:55,314   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_stopwatch.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_stopwatch.o
2023-10-22T15:28:55,322   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_alloc.o from vendor/easel/esl_alloc.c
2023-10-22T15:28:55,323   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_alloc.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_alloc.o
2023-10-22T15:28:55,477   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msafile_clustal.o from vendor/easel/esl_msafile_clustal.c
2023-10-22T15:28:55,479   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_msafile_clustal.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msafile_clustal.o
2023-10-22T15:28:55,486   vendor/easel/esl_stopwatch.c:15:15: warning: ‘stopwatch_getRealTime’ declared ‘static’ but never defined [-Wunused-function]
2023-10-22T15:28:55,486      15 | static double stopwatch_getRealTime(void);
2023-10-22T15:28:55,487         |               ^~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:28:55,540   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_sqio_ncbi.o from vendor/easel/esl_sqio_ncbi.c
2023-10-22T15:28:55,540   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_sqio_ncbi.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_sqio_ncbi.o
2023-10-22T15:28:55,654   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_huffman.o from vendor/easel/esl_huffman.c
2023-10-22T15:28:55,655   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_huffman.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_huffman.o
2023-10-22T15:28:55,727   vendor/easel/esl_sqio_ncbi.c: In function ‘sqncbi_ParseIndexFile’:
2023-10-22T15:28:55,727   vendor/easel/esl_sqio_ncbi.c:216:24: warning: comparison of integer expressions of different signedness: ‘__uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:28:55,728     216 |   if (htobe32(info[1]) != dbtype)                             status = eslEUNIMPLEMENTED;
2023-10-22T15:28:55,728         |                        ^~
2023-10-22T15:28:55,728   vendor/easel/esl_sqio_ncbi.c:226:58: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:28:55,729     226 |   if (fread(ncbi->title, sizeof(char), len, ncbi->fppin) != len) { status = eslFAIL; goto ERROR; }
2023-10-22T15:28:55,729         |                                                          ^~
2023-10-22T15:28:55,729   vendor/easel/esl_sqio_ncbi.c:233:62: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:28:55,730     233 |   if (fread(ncbi->timestamp, sizeof(char), len, ncbi->fppin) != len) { status = eslFAIL; goto ERROR; }
2023-10-22T15:28:55,730         |                                                              ^~
2023-10-22T15:28:55,742   vendor/easel/esl_sqio_ncbi.c: In function ‘sqncbi_Read’:
2023-10-22T15:28:55,742   vendor/easel/esl_sqio_ncbi.c:758:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:55,742     758 |   if (ncbi->index >= ncbi->num_seq) return eslEOF;
2023-10-22T15:28:55,743         |                   ^~
2023-10-22T15:28:55,743   vendor/easel/esl_sqio_ncbi.c: In function ‘sqncbi_ReadInfo’:
2023-10-22T15:28:55,744   vendor/easel/esl_sqio_ncbi.c:809:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:55,744     809 |   if (ncbi->index >= ncbi->num_seq) return eslEOF;
2023-10-22T15:28:55,744         |                   ^~
2023-10-22T15:28:55,745   vendor/easel/esl_sqio_ncbi.c: In function ‘sqncbi_ReadSequence’:
2023-10-22T15:28:55,745   vendor/easel/esl_sqio_ncbi.c:860:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:55,745     860 |   if (ncbi->index >= ncbi->num_seq) return eslEOF;
2023-10-22T15:28:55,746         |                   ^~
2023-10-22T15:28:55,749   vendor/easel/esl_sqio_ncbi.c: In function ‘sqncbi_ReadWindow’:
2023-10-22T15:28:55,749   vendor/easel/esl_sqio_ncbi.c:1036:33: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:28:55,749    1036 |     if (status != eslOK || nres != W) {
2023-10-22T15:28:55,750         |                                 ^~
2023-10-22T15:28:55,751   vendor/easel/esl_sqio_ncbi.c:1059:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:55,751    1059 |       if (ncbi->index >= ncbi->num_seq) return eslEOF;
2023-10-22T15:28:55,751         |                       ^~
2023-10-22T15:28:55,762   vendor/easel/esl_sqio_ncbi.c: In function ‘volume_open’:
2023-10-22T15:28:55,762   vendor/easel/esl_sqio_ncbi.c:1421:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:55,763    1421 |   if (volume < 0 || volume > ncbi->volumes) return eslEINVAL;
2023-10-22T15:28:55,763         |                            ^
2023-10-22T15:28:55,767   vendor/easel/esl_sqio_ncbi.c:1458:24: warning: comparison of integer expressions of different signedness: ‘__uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:28:55,767    1458 |   if (htobe32(info[1]) != dbtype)                             status = eslEFORMAT;
2023-10-22T15:28:55,768         |                        ^~
2023-10-22T15:28:55,768   vendor/easel/esl_sqio_ncbi.c: In function ‘pos_sequence’:
2023-10-22T15:28:55,769   vendor/easel/esl_sqio_ncbi.c:1513:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:55,769    1513 |   if (inx < 0 || inx > ncbi->num_seq) return eslEINVAL;
2023-10-22T15:28:55,769         |                      ^
2023-10-22T15:28:55,770   vendor/easel/esl_sqio_ncbi.c:1519:25: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:28:55,771    1519 |   if (ncbi->index_start == -1 || inx < start || inx > end) {
2023-10-22T15:28:55,771         |                         ^~
2023-10-22T15:28:55,771   vendor/easel/esl_sqio_ncbi.c:1519:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:55,772    1519 |   if (ncbi->index_start == -1 || inx < start || inx > end) {
2023-10-22T15:28:55,772         |                                      ^
2023-10-22T15:28:55,772   vendor/easel/esl_sqio_ncbi.c:1519:53: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:55,773    1519 |   if (ncbi->index_start == -1 || inx < start || inx > end) {
2023-10-22T15:28:55,773         |                                                     ^
2023-10-22T15:28:55,773   vendor/easel/esl_sqio_ncbi.c:1524:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:55,773    1524 |       if (inx < volume->start_seq || inx > volume->end_seq) {
2023-10-22T15:28:55,774         |               ^
2023-10-22T15:28:55,774   vendor/easel/esl_sqio_ncbi.c:1524:42: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:55,774    1524 |       if (inx < volume->start_seq || inx > volume->end_seq) {
2023-10-22T15:28:55,775         |                                          ^
2023-10-22T15:28:55,775   vendor/easel/esl_sqio_ncbi.c:1526:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:55,775    1526 |  for (cnt = 0; cnt < ncbi->volumes; ++cnt) {
2023-10-22T15:28:55,775         |                    ^
2023-10-22T15:28:55,776   vendor/easel/esl_sqio_ncbi.c:1527:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:55,776    1527 |    if (inx < volume->end_seq) break;
2023-10-22T15:28:55,776         |            ^
2023-10-22T15:28:55,793   vendor/easel/esl_sqio_ncbi.c:1532:10: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:55,793    1532 |  if (cnt >= ncbi->volumes) return eslFAIL;
2023-10-22T15:28:55,793         |          ^~
2023-10-22T15:28:55,793   vendor/easel/esl_sqio_ncbi.c:1539:27: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:28:55,794    1539 |     if (ncbi->index_start == -1 || inx > end) {
2023-10-22T15:28:55,794         |                           ^~
2023-10-22T15:28:55,794   vendor/easel/esl_sqio_ncbi.c:1539:40: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:55,794    1539 |     if (ncbi->index_start == -1 || inx > end) {
2023-10-22T15:28:55,795         |                                        ^
2023-10-22T15:28:55,795   vendor/easel/esl_sqio_ncbi.c:1564:70: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:28:55,795    1564 |     if (fread(ncbi->hdr_indexes, sizeof(uint32_t), cnt, ncbi->fppin) != cnt) {
2023-10-22T15:28:55,796         |                                                                      ^~
2023-10-22T15:28:55,796   vendor/easel/esl_sqio_ncbi.c:1572:70: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:28:55,796    1572 |     if (fread(ncbi->seq_indexes, sizeof(uint32_t), cnt, ncbi->fppin) != cnt) {
2023-10-22T15:28:55,796         |                                                                      ^~
2023-10-22T15:28:55,796   vendor/easel/esl_sqio_ncbi.c:1581:72: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:28:55,797    1581 |       if (fread(ncbi->amb_indexes, sizeof(uint32_t), cnt, ncbi->fppin) != cnt) {
2023-10-22T15:28:55,797         |                                                                        ^~
2023-10-22T15:28:55,797   vendor/easel/esl_sqio_ncbi.c: In function ‘read_amino’:
2023-10-22T15:28:55,797   vendor/easel/esl_sqio_ncbi.c:1623:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:55,798    1623 |   if (ncbi->index >= ncbi->num_seq) return eslEOF;
2023-10-22T15:28:55,798         |                   ^~
2023-10-22T15:28:55,798   vendor/easel/esl_sqio_ncbi.c:1633:53: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:28:55,799    1633 |     if (fread(ptr, sizeof(char), size, ncbi->fppsq) != size) return eslEFORMAT;
2023-10-22T15:28:55,799         |                                                     ^~
2023-10-22T15:28:55,799   vendor/easel/esl_sqio_ncbi.c:1641:53: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:28:55,800    1641 |     if (fread(ptr, sizeof(char), size, ncbi->fppsq) != size) return eslEFORMAT;
2023-10-22T15:28:55,800         |                                                     ^~
2023-10-22T15:28:55,800   vendor/easel/esl_sqio_ncbi.c: In function ‘read_dna’:
2023-10-22T15:28:55,800   vendor/easel/esl_sqio_ncbi.c:1690:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:55,800    1690 |   if (ncbi->index >= ncbi->num_seq) return eslEOF;
2023-10-22T15:28:55,801         |                   ^~
2023-10-22T15:28:55,801   vendor/easel/esl_sqio_ncbi.c:1701:61: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:28:55,801    1701 |   if (fread(ncbi->hdr_buf, sizeof(char), size, ncbi->fppsq) != size) return eslEFORMAT;
2023-10-22T15:28:55,801         |                                                             ^~
2023-10-22T15:28:55,801   vendor/easel/esl_sqio_ncbi.c:1754:33: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare]
2023-10-22T15:28:55,802    1754 |   if (ncbi->seq_apos - sq->doff < size) {
2023-10-22T15:28:55,802         |                                 ^
2023-10-22T15:28:55,802   vendor/easel/esl_sqio_ncbi.c: In function ‘read_nres_amino’:
2023-10-22T15:28:55,802   vendor/easel/esl_sqio_ncbi.c:1831:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:55,803    1831 |   if (ncbi->index >= ncbi->num_seq) return eslEOF;
2023-10-22T15:28:55,803         |                   ^~
2023-10-22T15:28:55,804   vendor/easel/esl_sqio_ncbi.c:1856:51: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:28:55,804    1856 |   if (fread(ptr, sizeof(char), size, ncbi->fppsq) != size) return eslEFORMAT;
2023-10-22T15:28:55,804         |                                                   ^~
2023-10-22T15:28:55,814   vendor/easel/esl_sqio_ncbi.c: In function ‘read_nres_dna’:
2023-10-22T15:28:55,815   vendor/easel/esl_sqio_ncbi.c:2005:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:55,816    2005 |   if (ncbi->index >= ncbi->num_seq) return eslEOF;
2023-10-22T15:28:55,817         |                   ^~
2023-10-22T15:28:55,820   vendor/easel/esl_sqio_ncbi.c:2047:62: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:28:55,821    2047 |   if (fread(ncbi->hdr_buf, sizeof(char), ssize, ncbi->fppsq) != ssize) return eslEFORMAT;
2023-10-22T15:28:55,821         |                                                              ^~
2023-10-22T15:28:55,827   vendor/easel/esl_sqio_ncbi.c: In function ‘inmap_ncbi_dna’:
2023-10-22T15:28:55,828   vendor/easel/esl_sqio_ncbi.c:2178:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:55,828    2178 |   for (x = 0; x < strlen(ncbisym); ++x) {
2023-10-22T15:28:55,829         |                 ^
2023-10-22T15:28:55,829   vendor/easel/esl_sqio_ncbi.c:2179:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:55,830    2179 |     for (y = 0; y < strlen(abc->sym); ++y) {
2023-10-22T15:28:55,830         |                   ^
2023-10-22T15:28:55,831   vendor/easel/esl_sqio_ncbi.c:2187:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:55,831    2187 |     if (y >= strlen(abc->sym)) return eslEFORMAT;
2023-10-22T15:28:55,831         |           ^~
2023-10-22T15:28:55,833   vendor/easel/esl_sqio_ncbi.c: In function ‘inmap_ncbi_amino’:
2023-10-22T15:28:55,834   vendor/easel/esl_sqio_ncbi.c:2226:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:55,834    2226 |   for (x = 0; x < strlen(ncbisym); ++x) {
2023-10-22T15:28:55,834         |                 ^
2023-10-22T15:28:55,835   vendor/easel/esl_sqio_ncbi.c:2227:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:55,835    2227 |     for (y = 0; y < strlen(abc->sym); ++y) {
2023-10-22T15:28:55,836         |                   ^
2023-10-22T15:28:55,836   vendor/easel/esl_sqio_ncbi.c:2235:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:55,837    2235 |     if (y >= strlen(abc->sym)) return eslEFORMAT;
2023-10-22T15:28:55,837         |           ^~
2023-10-22T15:28:55,841   vendor/easel/esl_sqio_ncbi.c: In function ‘parse_header’:
2023-10-22T15:28:55,842   vendor/easel/esl_sqio_ncbi.c:2463:61: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:28:55,842    2463 |   if (fread(ncbi->hdr_buf, sizeof(char), size, ncbi->fpphr) != size) return eslEFORMAT;
2023-10-22T15:28:55,843         |                                                             ^~
2023-10-22T15:28:55,905   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_mixgev.o from vendor/easel/esl_mixgev.c
2023-10-22T15:28:55,906   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_mixgev.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_mixgev.o
2023-10-22T15:28:56,428   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_getopts.o from vendor/easel/esl_getopts.c
2023-10-22T15:28:56,429   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_getopts.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_getopts.o
2023-10-22T15:28:56,633   vendor/easel/esl_getopts.c: In function ‘get_optidx_abbrev’:
2023-10-22T15:28:56,634   vendor/easel/esl_getopts.c:1391:8: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:28:56,634    1391 |  if (n == strlen(g->opt[i].name)) { nexact++; break; } /* an exact match; can stop now (xref bug #e4) */
2023-10-22T15:28:56,634         |        ^~
2023-10-22T15:28:56,782   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_varint.o from vendor/easel/esl_varint.c
2023-10-22T15:28:56,783   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_varint.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_varint.o
2023-10-22T15:28:56,982   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_regexp.o from vendor/easel/esl_regexp.c
2023-10-22T15:28:56,982   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_regexp.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_regexp.o
2023-10-22T15:28:57,230   vendor/easel/esl_varint.c: In function ‘esl_varint_google_decode’:
2023-10-22T15:28:57,230   vendor/easel/esl_varint.c:471:11: warning: ‘grp’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T15:28:57,230     471 |   if (grp & cmask) { status = eslEOD; goto ERROR; }
2023-10-22T15:28:57,231         |       ~~~~^~~~~~~
2023-10-22T15:28:57,315   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_sqio.o from vendor/easel/esl_sqio.c
2023-10-22T15:28:57,316   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_sqio.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_sqio.o
2023-10-22T15:28:57,854   vendor/easel/esl_regexp.c: In function ‘regbranch’:
2023-10-22T15:28:57,855   vendor/easel/esl_regexp.c:804:18: warning: ‘flags’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T15:28:57,855     804 |   *flagp |= flags&HASWIDTH;
2023-10-22T15:28:57,855         |                  ^
2023-10-22T15:28:58,361   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msa.o from vendor/easel/esl_msa.c
2023-10-22T15:28:58,362   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_msa.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msa.o
2023-10-22T15:28:58,407   generating build/temp.linux-armv7l-cpython-39/build/temp.linux-armv7l-cpython-39/esl_sqio_ascii.o from build/temp.linux-armv7l-cpython-39/esl_sqio_ascii.c
2023-10-22T15:28:58,408   creating build/temp.linux-armv7l-cpython-39/build
2023-10-22T15:28:58,408   creating build/temp.linux-armv7l-cpython-39/build/temp.linux-armv7l-cpython-39
2023-10-22T15:28:58,410   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c build/temp.linux-armv7l-cpython-39/esl_sqio_ascii.c -o build/temp.linux-armv7l-cpython-39/build/temp.linux-armv7l-cpython-39/esl_sqio_ascii.o
2023-10-22T15:28:58,660   build/temp.linux-armv7l-cpython-39/esl_sqio_ascii.c: In function ‘sqascii_Echo’:
2023-10-22T15:28:58,661   build/temp.linux-armv7l-cpython-39/esl_sqio_ascii.c:1671:60: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:28:58,661    1671 |       if (fwrite(ascii->buf, sizeof(char), ascii->nc, ofp) != ascii->nc) ESL_EXCEPTION(eslESYS, "fwrite() failed");
2023-10-22T15:28:58,662         |                                                            ^~
2023-10-22T15:29:00,193   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_subcmd.o from vendor/easel/esl_subcmd.c
2023-10-22T15:29:00,193   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_subcmd.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_subcmd.o
2023-10-22T15:29:00,424   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_keyhash.o from vendor/easel/esl_keyhash.c
2023-10-22T15:29:00,424   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_keyhash.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_keyhash.o
2023-10-22T15:29:00,567   vendor/easel/esl_keyhash.c: In function ‘esl_keyhash_Clone’:
2023-10-22T15:29:00,568   vendor/easel/esl_keyhash.c:94:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘const unsigned int’} [-Wsign-compare]
2023-10-22T15:29:00,568      94 |   for (h = 0; h < kh->hashsize; h++)
2023-10-22T15:29:00,568         |                 ^
2023-10-22T15:29:00,569   vendor/easel/esl_keyhash.c: In function ‘esl_keyhash_Reuse’:
2023-10-22T15:29:00,570   vendor/easel/esl_keyhash.c:171:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:00,570     171 |   for (i = 0; i < kh->hashsize; i++) kh->hashtable[i] = -1;
2023-10-22T15:29:00,570         |                 ^
2023-10-22T15:29:00,571   vendor/easel/esl_keyhash.c: In function ‘esl_keyhash_Dump’:
2023-10-22T15:29:00,572   vendor/easel/esl_keyhash.c:215:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘const unsigned int’} [-Wsign-compare]
2023-10-22T15:29:00,572     215 |   for (h = 0; h < kh->hashsize; h++)
2023-10-22T15:29:00,573         |                 ^
2023-10-22T15:29:00,575   vendor/easel/esl_keyhash.c: In function ‘esl_keyhash_Store’:
2023-10-22T15:29:00,576   vendor/easel/esl_keyhash.c:310:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:00,576     310 |   if (kh->nkeys > 3*kh->hashsize)
2023-10-22T15:29:00,576         |                 ^
2023-10-22T15:29:00,578   vendor/easel/esl_keyhash.c: In function ‘keyhash_create’:
2023-10-22T15:29:00,578   vendor/easel/esl_keyhash.c:401:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:00,578     401 |   for (i = 0; i < kh->hashsize; i++)  kh->hashtable[i] = -1;
2023-10-22T15:29:00,579         |                 ^
2023-10-22T15:29:00,580   vendor/easel/esl_keyhash.c: In function ‘key_upsize’:
2023-10-22T15:29:00,580   vendor/easel/esl_keyhash.c:491:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:00,581     491 |   for (i = 0; i < kh->hashsize; i++) kh->hashtable[i] = -1;
2023-10-22T15:29:00,581         |                 ^
2023-10-22T15:29:01,019   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_hyperexp.o from vendor/easel/esl_hyperexp.c
2023-10-22T15:29:01,019   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_hyperexp.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_hyperexp.o
2023-10-22T15:29:02,159   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_mixdchlet.o from vendor/easel/esl_mixdchlet.c
2023-10-22T15:29:02,159   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_mixdchlet.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_mixdchlet.o
2023-10-22T15:29:02,503   generating build/temp.linux-armv7l-cpython-39/vendor/easel/esl_exponential.o from vendor/easel/esl_exponential.c
2023-10-22T15:29:02,503   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/easel/esl_exponential.c -o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_exponential.o
2023-10-22T15:29:02,969   arm-linux-gnueabihf-gcc-ar rcs build/temp.linux-armv7l-cpython-39/libeasel.a build/temp.linux-armv7l-cpython-39/vendor/easel/esl_avx.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_sq.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_fileparser.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_gencode.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_heap.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_ratematrix.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_dmatrix.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_matrixops.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_buffer.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msafile_psiblast.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msafile_a2m.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_arr3.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_vectorops.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_rootfinder.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_histogram.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_random.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msafile2.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_avx512.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_minimizer.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msafile_phylip.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_sse.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_alphabet.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_workqueue.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msacluster.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_tree.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_weibull.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_stack.o build/temp.linux-armv7l-cpython-39/vendor/easel/interface_gsl.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msafile_stockholm.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_graph.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_distance.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_neon.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_dsqdata.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_normal.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_cluster.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msafile.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_threads.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_hmm.o build/temp.linux-armv7l-cpython-39/vendor/easel/easel.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msaweight.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_mem.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_rand64.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_gev.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msafile_selex.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_recorder.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_mpi.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_gumbel.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msashuffle.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_quicksort.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_json.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_vmx.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_arr2.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_dirichlet.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msafile_afa.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_lognormal.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_red_black.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_gamma.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_bitfield.o build/temp.linux-armv7l-cpython-39/vendor/easel/interface_lapack.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_ssi.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_stats.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_composition.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_swat.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_stretchexp.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_randomseq.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_mixgev.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_cpu.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_paml.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_wuss.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_scorematrix.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msafile_clustal.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_regexp.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_iset.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_stopwatch.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_huffman.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_getopts.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_msa.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_exponential.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_alloc.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_sqio_ncbi.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_subcmd.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_keyhash.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_hyperexp.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_mixdchlet.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_varint.o build/temp.linux-armv7l-cpython-39/vendor/easel/esl_sqio.o build/temp.linux-armv7l-cpython-39/build/temp.linux-armv7l-cpython-39/esl_sqio_ascii.o
2023-10-22T15:29:03,145   generating build/temp.linux-armv7l-cpython-39/libhmmer.a from vendor/hmmer/src/build.c, vendor/hmmer/src/cachedb.c, vendor/hmmer/src/cachedb_shard.c, vendor/hmmer/src/emit.c, vendor/hmmer/src/errors.c, vendor/hmmer/src/evalues.c, vendor/hmmer/src/eweight.c, vendor/hmmer/src/generic_decoding.c, vendor/hmmer/src/generic_fwdback.c, vendor/hmmer/src/generic_fwdback_chk.c, vendor/hmmer/src/generic_fwdback_banded.c, vendor/hmmer/src/generic_null2.c, vendor/hmmer/src/generic_msv.c, vendor/hmmer/src/generic_optacc.c, vendor/hmmer/src/generic_stotrace.c, vendor/hmmer/src/generic_viterbi.c, vendor/hmmer/src/generic_vtrace.c, vendor/hmmer/src/h2_io.c, vendor/hmmer/src/heatmap.c, vendor/hmmer/src/hmmlogo.c, vendor/hmmer/src/hmmdmstr.c, vendor/hmmer/src/hmmdmstr_shard.c, vendor/hmmer/src/hmmd_search_status.c, vendor/hmmer/src/hmmdwrkr.c, vendor/hmmer/src/hmmdwrkr_shard.c, vendor/hmmer/src/hmmdutils.c, vendor/hmmer/src/hmmer.c, vendor/hmmer/src/logsum.c, vendor/hmmer/src/modelconfig.c, vendor/hmmer/src/modelstats.c, vendor/hmmer/src/mpisupport.c, vendor/hmmer/src/seqmodel.c, vendor/hmmer/src/tracealign.c, vendor/hmmer/src/p7_alidisplay.c, vendor/hmmer/src/p7_bg.c, vendor/hmmer/src/p7_builder.c, vendor/hmmer/src/p7_domain.c, vendor/hmmer/src/p7_domaindef.c, vendor/hmmer/src/p7_gbands.c, vendor/hmmer/src/p7_gmx.c, vendor/hmmer/src/p7_gmxb.c, vendor/hmmer/src/p7_gmxchk.c, vendor/hmmer/src/p7_hit.c, vendor/hmmer/src/p7_hmm.c, vendor/hmmer/src/p7_hmmcache.c, vendor/hmmer/src/p7_hmmd_search_stats.c, vendor/hmmer/src/p7_hmmfile.c, vendor/hmmer/src/p7_hmmwindow.c, vendor/hmmer/src/p7_pipeline.c, vendor/hmmer/src/p7_prior.c, vendor/hmmer/src/p7_profile.c, vendor/hmmer/src/p7_spensemble.c, vendor/hmmer/src/p7_tophits.c, vendor/hmmer/src/p7_trace.c, vendor/hmmer/src/p7_scoredata.c, vendor/hmmer/src/hmmpgmd2msa.c, vendor/hmmer/src/fm_alphabet.c, vendor/hmmer/src/fm_general.c, vendor/hmmer/src/fm_sse.c, vendor/hmmer/src/fm_ssv.c
2023-10-22T15:29:03,145   generating build/temp.linux-armv7l-cpython-39/p7_hmmfile.c from vendor/hmmer/src/p7_hmmfile.c
2023-10-22T15:29:03,157   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/build.o from vendor/hmmer/src/build.c
2023-10-22T15:29:03,158   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/generic_fwdback_banded.o from vendor/hmmer/src/generic_fwdback_banded.c
2023-10-22T15:29:03,159   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/evalues.o from vendor/hmmer/src/evalues.c
2023-10-22T15:29:03,159   creating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src
2023-10-22T15:29:03,160   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/generic_viterbi.o from vendor/hmmer/src/generic_viterbi.c
2023-10-22T15:29:03,160   creating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src
2023-10-22T15:29:03,161   creating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src
2023-10-22T15:29:03,162   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/build.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/build.o
2023-10-22T15:29:03,163   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/generic_fwdback_banded.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/generic_fwdback_banded.o
2023-10-22T15:29:03,163   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/generic_viterbi.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/generic_viterbi.o
2023-10-22T15:29:03,167   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/evalues.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/evalues.o
2023-10-22T15:29:03,907   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/generic_null2.o from vendor/hmmer/src/generic_null2.c
2023-10-22T15:29:03,909   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/generic_null2.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/generic_null2.o
2023-10-22T15:29:04,148   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/generic_vtrace.o from vendor/hmmer/src/generic_vtrace.c
2023-10-22T15:29:04,148   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/generic_vtrace.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/generic_vtrace.o
2023-10-22T15:29:04,263   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/eweight.o from vendor/hmmer/src/eweight.c
2023-10-22T15:29:04,264   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/eweight.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/eweight.o
2023-10-22T15:29:04,313   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/cachedb.o from vendor/hmmer/src/cachedb.c
2023-10-22T15:29:04,313   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/cachedb.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/cachedb.o
2023-10-22T15:29:04,741   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/generic_msv.o from vendor/hmmer/src/generic_msv.c
2023-10-22T15:29:04,742   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/generic_msv.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/generic_msv.o
2023-10-22T15:29:04,876   vendor/hmmer/src/cachedb.c: In function ‘p7_seqcache_Open’:
2023-10-22T15:29:04,877   vendor/hmmer/src/cachedb.c:95:14: warning: comparison of integer expressions of different signedness: ‘int32_t’ {aka ‘int’} and ‘unsigned int’ [-Wsign-compare]
2023-10-22T15:29:04,877      95 |   if (db_cnt > (sizeof(db_inx)/sizeof(db_inx[0])))      return eslEFORMAT;
2023-10-22T15:29:04,877         |              ^
2023-10-22T15:29:04,880   vendor/hmmer/src/cachedb.c:157:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:04,881     157 |     if (inx >= seq_cnt)       { printf("inx: %d\n", inx); return eslEFORMAT; }
2023-10-22T15:29:04,881         |             ^~
2023-10-22T15:29:04,881   vendor/hmmer/src/cachedb.c:158:19: warning: comparison of integer expressions of different signedness: ‘int64_t’ {aka ‘long long int’} and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:04,882     158 |     if (sq->n + 1 > res_size) { printf("inx: %d size %d %d\n", inx, (int)sq->n + 1, (int)res_size); return eslEFORMAT; }
2023-10-22T15:29:04,883         |                   ^
2023-10-22T15:29:04,883   vendor/hmmer/src/cachedb.c:179:16: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:04,883     179 |     if (db_key >= (1 << (db_cnt + 1))) { printf("inx: %d db %d %s\n", inx, db_key, sq->desc); return eslEFORMAT; }
2023-10-22T15:29:04,884         |                ^~
2023-10-22T15:29:04,884   vendor/hmmer/src/cachedb.c:212:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:04,884     212 |   if (inx != seq_cnt) { printf("inx:: %d %" PRIu64 "\n", inx, seq_cnt);  return eslEFORMAT; }
2023-10-22T15:29:04,885         |           ^~
2023-10-22T15:29:04,885   vendor/hmmer/src/cachedb.c:222:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:04,885     222 |   for (i = 0 ; i < seq_cnt; ++i) {
2023-10-22T15:29:04,886         |                  ^
2023-10-22T15:29:04,886   vendor/hmmer/src/cachedb.c:230:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:04,886     230 |   for (i = 0 ; i < seq_cnt; ++i) {
2023-10-22T15:29:04,886         |                  ^
2023-10-22T15:29:04,887   vendor/hmmer/src/cachedb.c:236:25: warning: comparison of integer expressions of different signedness: ‘int32_t’ {aka ‘int’} and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:04,887     236 |         if (db_inx[inx] >= db->count) { printf("sort:: %d %d\n", db_inx[inx], db->count); return eslEFORMAT; }
2023-10-22T15:29:04,887         |                         ^~
2023-10-22T15:29:04,888   vendor/hmmer/src/cachedb.c:246:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:04,889     246 |   for (i = 0; i < cache->db_cnt; ++i) {
2023-10-22T15:29:04,889         |                 ^
2023-10-22T15:29:04,890   vendor/hmmer/src/cachedb.c: In function ‘p7_seqcache_Close’:
2023-10-22T15:29:04,891   vendor/hmmer/src/cachedb.c:284:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:04,892     284 |       for (i = 0; i < cache->db_cnt; ++i) {
2023-10-22T15:29:04,902         |                     ^
2023-10-22T15:29:04,950   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/generic_decoding.o from vendor/hmmer/src/generic_decoding.c
2023-10-22T15:29:04,951   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/generic_decoding.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/generic_decoding.o
2023-10-22T15:29:05,146   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/h2_io.o from vendor/hmmer/src/h2_io.c
2023-10-22T15:29:05,147   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/h2_io.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/h2_io.o
2023-10-22T15:29:05,486   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/cachedb_shard.o from vendor/hmmer/src/cachedb_shard.c
2023-10-22T15:29:05,487   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/cachedb_shard.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/cachedb_shard.o
2023-10-22T15:29:05,628   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/generic_optacc.o from vendor/hmmer/src/generic_optacc.c
2023-10-22T15:29:05,629   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/generic_optacc.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/generic_optacc.o
2023-10-22T15:29:05,768   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/generic_fwdback.o from vendor/hmmer/src/generic_fwdback.c
2023-10-22T15:29:05,769   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/generic_fwdback.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/generic_fwdback.o
2023-10-22T15:29:05,778   vendor/hmmer/src/h2_io.c: In function ‘h2_multiline’:
2023-10-22T15:29:05,779   vendor/hmmer/src/h2_io.c:213:40: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:05,779     213 |  if (fwrite(sptr, sizeof(char), n, fp) != n) ESL_EXCEPTION_SYS(eslEWRITE, "h2 profile write failed");   /* using fwrite lets us write fixed # of chars   */
2023-10-22T15:29:05,780         |                                        ^~
2023-10-22T15:29:06,066   vendor/hmmer/src/cachedb_shard.c: In function ‘p7_seqcache_Open_master’:
2023-10-22T15:29:06,067   vendor/hmmer/src/cachedb_shard.c:117:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:06,067     117 |   for (i = 0; i < db_cnt; ++i) {
2023-10-22T15:29:06,068         |                 ^
2023-10-22T15:29:06,069   vendor/hmmer/src/cachedb_shard.c:159:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:06,069     159 |   for (i = 0; i < db_cnt; ++i) db_inx[i] = 0;
2023-10-22T15:29:06,069         |                 ^
2023-10-22T15:29:06,070   vendor/hmmer/src/cachedb_shard.c:167:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:06,070     167 |     if (inx >= seq_cnt)       { printf("inx: %d\n", inx); return eslEFORMAT; }
2023-10-22T15:29:06,070         |             ^~
2023-10-22T15:29:06,071   vendor/hmmer/src/cachedb_shard.c:191:16: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:06,071     191 |     if (db_key >= (1 << (db_cnt + 1))) { printf("inx: %d db_cnt %d db %d %s\n", inx, db_cnt, db_key, sq->desc); return eslEFORMAT; }
2023-10-22T15:29:06,071         |                ^~
2023-10-22T15:29:06,071   vendor/hmmer/src/cachedb_shard.c:225:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:06,072     225 |   if (inx != seq_cnt) { printf("inx:: %d %" PRIu64 "\n", inx, seq_cnt);  return eslEFORMAT; }
2023-10-22T15:29:06,072         |           ^~
2023-10-22T15:29:06,072   vendor/hmmer/src/cachedb_shard.c:235:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:06,073     235 |   for (i = 0 ; i < seq_cnt; ++i) {
2023-10-22T15:29:06,073         |                  ^
2023-10-22T15:29:06,073   vendor/hmmer/src/cachedb_shard.c:243:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:06,073     243 |   for (i = 0 ; i < seq_cnt; ++i) {
2023-10-22T15:29:06,074         |                  ^
2023-10-22T15:29:06,074   vendor/hmmer/src/cachedb_shard.c:259:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:06,074     259 |   for (i = 0; i < cache->db_cnt; ++i) {
2023-10-22T15:29:06,074         |                 ^
2023-10-22T15:29:06,075   vendor/hmmer/src/cachedb_shard.c:282:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:06,075     282 |   for (i = 0; i < db_cnt; ++i) {
2023-10-22T15:29:06,075         |                 ^
2023-10-22T15:29:06,075   vendor/hmmer/src/cachedb_shard.c: In function ‘p7_seqcache_Close_master’:
2023-10-22T15:29:06,076   vendor/hmmer/src/cachedb_shard.c:297:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:06,076     297 |       for (i = 0; i < cache->db_cnt; ++i) {
2023-10-22T15:29:06,076         |                     ^
2023-10-22T15:29:06,083   vendor/hmmer/src/cachedb_shard.c: In function ‘p7_seqcache_Open_shard’:
2023-10-22T15:29:06,083   vendor/hmmer/src/cachedb_shard.c:388:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:06,083     388 |   for (i = 0; i < db_cnt; ++i) {
2023-10-22T15:29:06,084         |                 ^
2023-10-22T15:29:06,084   vendor/hmmer/src/cachedb_shard.c:398:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:06,084     398 |   for (i = 0; i < db_cnt; i++){
2023-10-22T15:29:06,084         |                 ^
2023-10-22T15:29:06,085   vendor/hmmer/src/cachedb_shard.c:434:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:06,085     434 |   for (i = 0; i < db_cnt; ++i) db_inx[i] = 0;
2023-10-22T15:29:06,085         |                 ^
2023-10-22T15:29:06,085   vendor/hmmer/src/cachedb_shard.c:445:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:06,086     445 |     if (inx >= seq_cnt)       { printf("inx: %d\n", inx); return eslEFORMAT; }
2023-10-22T15:29:06,086         |             ^~
2023-10-22T15:29:06,086   vendor/hmmer/src/cachedb_shard.c:446:19: warning: comparison of integer expressions of different signedness: ‘int64_t’ {aka ‘long long int’} and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:06,086     446 |     if (sq->n + 1 > res_size) { printf("inx: %d size %d %d\n", inx, (int)sq->n + 1, (int)res_size); return eslEFORMAT; }
2023-10-22T15:29:06,087         |                   ^
2023-10-22T15:29:06,087   vendor/hmmer/src/cachedb_shard.c:463:41: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:06,087     463 |         if(db_seq_count[i] % num_shards == my_shard){ //this sequence is part of database i and belongs to this node's shard
2023-10-22T15:29:06,087         |                                         ^~
2023-10-22T15:29:06,088   vendor/hmmer/src/cachedb_shard.c:475:16: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:06,088     475 |     if (db_key >= (1 << (db_cnt + 1))) { printf("inx: %d db %d %s\n", inx, db_key, sq->desc); return eslEFORMAT; }
2023-10-22T15:29:06,088         |                ^~
2023-10-22T15:29:06,088   vendor/hmmer/src/cachedb_shard.c:544:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:06,088     544 |   for(i = 0; i < db_cnt; i++){
2023-10-22T15:29:06,089         |                ^
2023-10-22T15:29:06,089   vendor/hmmer/src/cachedb_shard.c:560:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:06,089     560 |   for (i = 0 ; i < seq_cnt; ++i) {
2023-10-22T15:29:06,089         |                  ^
2023-10-22T15:29:06,090   vendor/hmmer/src/cachedb_shard.c:568:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:06,090     568 |   for (i = 0 ; i < seq_cnt; ++i) {
2023-10-22T15:29:06,090         |                  ^
2023-10-22T15:29:06,091   vendor/hmmer/src/cachedb_shard.c:585:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:06,092     585 |   for (i = 0; i < cache->db_cnt; ++i) {
2023-10-22T15:29:06,103         |                 ^
2023-10-22T15:29:06,103   vendor/hmmer/src/cachedb_shard.c:615:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:06,103     615 |   for (i = 0; i < db_cnt; ++i) {
2023-10-22T15:29:06,104         |                 ^
2023-10-22T15:29:06,342   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/heatmap.o from vendor/hmmer/src/heatmap.c
2023-10-22T15:29:06,342   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/heatmap.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/heatmap.o
2023-10-22T15:29:06,626   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/hmmlogo.o from vendor/hmmer/src/hmmlogo.c
2023-10-22T15:29:06,626   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/hmmlogo.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/hmmlogo.o
2023-10-22T15:29:06,873   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/generic_fwdback_chk.o from vendor/hmmer/src/generic_fwdback_chk.c
2023-10-22T15:29:06,874   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/generic_fwdback_chk.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/generic_fwdback_chk.o
2023-10-22T15:29:06,942   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/generic_stotrace.o from vendor/hmmer/src/generic_stotrace.c
2023-10-22T15:29:06,944   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/generic_stotrace.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/generic_stotrace.o
2023-10-22T15:29:07,318   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/emit.o from vendor/hmmer/src/emit.c
2023-10-22T15:29:07,319   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/emit.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/emit.o
2023-10-22T15:29:07,595   vendor/hmmer/src/generic_stotrace.c: In function ‘p7_GStochasticTrace’:
2023-10-22T15:29:07,596   vendor/hmmer/src/generic_stotrace.c:175:44: warning: ‘scur’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T15:29:07,596     175 |       if ( (scur == p7T_N || scur == p7T_J || scur == p7T_C) && scur == sprv) i--;
2023-10-22T15:29:07,597         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2023-10-22T15:29:07,820   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/hmmdmstr.o from vendor/hmmer/src/hmmdmstr.c
2023-10-22T15:29:07,820   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/hmmdmstr.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/hmmdmstr.o
2023-10-22T15:29:07,843   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/hmmdutils.o from vendor/hmmer/src/hmmdutils.c
2023-10-22T15:29:07,844   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/hmmdutils.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/hmmdutils.o
2023-10-22T15:29:07,908   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/hmmdmstr_shard.o from vendor/hmmer/src/hmmdmstr_shard.c
2023-10-22T15:29:07,909   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/hmmdmstr_shard.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/hmmdmstr_shard.o
2023-10-22T15:29:07,936   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/hmmer.o from vendor/hmmer/src/hmmer.c
2023-10-22T15:29:07,937   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/hmmer.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/hmmer.o
2023-10-22T15:29:08,002   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/hmmd_search_status.o from vendor/hmmer/src/hmmd_search_status.c
2023-10-22T15:29:08,004   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/hmmd_search_status.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/hmmd_search_status.o
2023-10-22T15:29:08,108   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/mpisupport.o from vendor/hmmer/src/mpisupport.c
2023-10-22T15:29:08,109   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/mpisupport.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/mpisupport.o
2023-10-22T15:29:08,216   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/seqmodel.o from vendor/hmmer/src/seqmodel.c
2023-10-22T15:29:08,217   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/seqmodel.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/seqmodel.o
2023-10-22T15:29:08,640   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/errors.o from vendor/hmmer/src/errors.c
2023-10-22T15:29:08,641   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/errors.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/errors.o
2023-10-22T15:29:08,669   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/logsum.o from vendor/hmmer/src/logsum.c
2023-10-22T15:29:08,670   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/logsum.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/logsum.o
2023-10-22T15:29:08,780   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/hmmdwrkr.o from vendor/hmmer/src/hmmdwrkr.c
2023-10-22T15:29:08,781   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/hmmdwrkr.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/hmmdwrkr.o
2023-10-22T15:29:08,866   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/hmmdwrkr_shard.o from vendor/hmmer/src/hmmdwrkr_shard.c
2023-10-22T15:29:08,868   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/hmmdwrkr_shard.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/hmmdwrkr_shard.o
2023-10-22T15:29:08,909   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/tracealign.o from vendor/hmmer/src/tracealign.c
2023-10-22T15:29:08,910   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/tracealign.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/tracealign.o
2023-10-22T15:29:08,957   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_builder.o from vendor/hmmer/src/p7_builder.c
2023-10-22T15:29:08,958   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/p7_builder.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_builder.o
2023-10-22T15:29:09,264   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_gmxb.o from vendor/hmmer/src/p7_gmxb.c
2023-10-22T15:29:09,265   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/p7_gmxb.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_gmxb.o
2023-10-22T15:29:09,356   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/modelconfig.o from vendor/hmmer/src/modelconfig.c
2023-10-22T15:29:09,357   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/modelconfig.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/modelconfig.o
2023-10-22T15:29:10,248   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_gmxchk.o from vendor/hmmer/src/p7_gmxchk.c
2023-10-22T15:29:10,249   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/p7_gmxchk.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_gmxchk.o
2023-10-22T15:29:10,340   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/modelstats.o from vendor/hmmer/src/modelstats.c
2023-10-22T15:29:10,341   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/modelstats.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/modelstats.o
2023-10-22T15:29:10,754   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_domain.o from vendor/hmmer/src/p7_domain.c
2023-10-22T15:29:10,755   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/p7_domain.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_domain.o
2023-10-22T15:29:11,182   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_hit.o from vendor/hmmer/src/p7_hit.c
2023-10-22T15:29:11,184   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/p7_hit.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_hit.o
2023-10-22T15:29:11,210   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_hmmd_search_stats.o from vendor/hmmer/src/p7_hmmd_search_stats.c
2023-10-22T15:29:11,211   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/p7_hmmd_search_stats.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_hmmd_search_stats.o
2023-10-22T15:29:11,241   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_alidisplay.o from vendor/hmmer/src/p7_alidisplay.c
2023-10-22T15:29:11,242   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/p7_alidisplay.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_alidisplay.o
2023-10-22T15:29:11,361   vendor/hmmer/src/p7_domain.c: In function ‘p7_domain_Serialize’:
2023-10-22T15:29:11,361   vendor/hmmer/src/p7_domain.c:228:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,362     228 |   network_32bit = esl_hton32(*((uint32_t *) &(obj->envsc)));  // ow, this hurts, but is probably the best way to get the
2023-10-22T15:29:11,362         |                               ~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,363   vendor/hmmer/src/p7_domain.c:235:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,363     235 |   network_32bit = esl_hton32(*((uint32_t *) &(obj->domcorrection)));
2023-10-22T15:29:11,363         |                               ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,364   vendor/hmmer/src/p7_domain.c:240:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,364     240 |   network_32bit = esl_hton32(*((uint32_t *) &(obj->dombias)));
2023-10-22T15:29:11,364         |                               ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,365   vendor/hmmer/src/p7_domain.c:245:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,365     245 |   network_32bit = esl_hton32(*((uint32_t *) &(obj->oasc)));
2023-10-22T15:29:11,365         |                               ~^~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,365   vendor/hmmer/src/p7_domain.c:250:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,366     250 |   network_32bit = esl_hton32(*((uint32_t *) &(obj->bitscore)));
2023-10-22T15:29:11,366         |                               ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,366   vendor/hmmer/src/p7_domain.c:255:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,366     255 |   network_64bit = esl_hton64(*((uint64_t *) &(obj->lnP)));
2023-10-22T15:29:11,367         |                               ~^~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,367   vendor/hmmer/src/p7_domain.c:290:16: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:11,367     290 |   if (ser_size != ptr - (*buf + *n)){
2023-10-22T15:29:11,367         |                ^~
2023-10-22T15:29:11,368   vendor/hmmer/src/p7_domain.c: In function ‘p7_domain_Deserialize’:
2023-10-22T15:29:11,368   vendor/hmmer/src/p7_domain.c:379:22: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,368     379 |   ret_obj->envsc = *((float *) &host_32bit);
2023-10-22T15:29:11,369         |                     ~^~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,369   vendor/hmmer/src/p7_domain.c:385:30: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,369     385 |   ret_obj->domcorrection = *((float *) &host_32bit);
2023-10-22T15:29:11,369         |                             ~^~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,370   vendor/hmmer/src/p7_domain.c:391:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,370     391 |   ret_obj->dombias = *((float *) &host_32bit);
2023-10-22T15:29:11,371         |                       ~^~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,371   vendor/hmmer/src/p7_domain.c:397:21: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,372     397 |   ret_obj->oasc = *((float *) &host_32bit);
2023-10-22T15:29:11,375         |                    ~^~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,375   vendor/hmmer/src/p7_domain.c:403:25: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,375     403 |   ret_obj->bitscore = *((float *) &host_32bit);
2023-10-22T15:29:11,376         |                        ~^~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,376   vendor/hmmer/src/p7_domain.c:409:20: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,377     409 |   ret_obj->lnP = *((double *) &host_64bit);
2023-10-22T15:29:11,377         |                   ~^~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,377   vendor/hmmer/src/p7_domain.c:436:38: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,378     436 |       ret_obj->scores_per_pos[i] = *((float *) &host_32bit);
2023-10-22T15:29:11,378         |                                     ~^~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,378   vendor/hmmer/src/p7_domain.c:442:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:11,378     442 |   if(ptr - (buf + *n) != obj_size){
2023-10-22T15:29:11,379         |                       ^~
2023-10-22T15:29:11,710   vendor/hmmer/src/p7_hit.c: In function ‘p7_hit_Serialize’:
2023-10-22T15:29:11,710   vendor/hmmer/src/p7_hit.c:287:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,711     287 |   network_64bit = esl_hton64(*((uint64_t *) &(obj->sortkey)));
2023-10-22T15:29:11,711         |                               ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,711   vendor/hmmer/src/p7_hit.c:292:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,712     292 |   network_32bit = esl_hton32(*((uint32_t *) &(obj->score)));
2023-10-22T15:29:11,712         |                               ~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,712   vendor/hmmer/src/p7_hit.c:297:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,713     297 |   network_32bit = esl_hton32(*((uint32_t *) &(obj->pre_score)));
2023-10-22T15:29:11,713         |                               ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,713   vendor/hmmer/src/p7_hit.c:302:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,713     302 |   network_32bit = esl_hton32(*((uint32_t *) &(obj->sum_score)));
2023-10-22T15:29:11,714         |                               ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,714   vendor/hmmer/src/p7_hit.c:307:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,714     307 |   network_64bit = esl_hton64(*((uint64_t *) &(obj->lnP)));
2023-10-22T15:29:11,715         |                               ~^~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,715   vendor/hmmer/src/p7_hit.c:312:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,715     312 |   network_64bit = esl_hton64(*((uint64_t *) &(obj->pre_lnP)));
2023-10-22T15:29:11,715         |                               ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,716   vendor/hmmer/src/p7_hit.c:317:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,716     317 |   network_64bit = esl_hton64(*((uint64_t *) &(obj->sum_lnP)));
2023-10-22T15:29:11,716         |                               ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,716   vendor/hmmer/src/p7_hit.c:322:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,717     322 |   network_32bit = esl_hton32(*((uint32_t *) &(obj->nexpected)));
2023-10-22T15:29:11,717         |                               ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,717   vendor/hmmer/src/p7_hit.c:403:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:11,718     403 |   if(ptr -(*buf + *n) != ser_size){
2023-10-22T15:29:11,718         |                       ^~
2023-10-22T15:29:11,718   vendor/hmmer/src/p7_hit.c: In function ‘p7_hit_Deserialize’:
2023-10-22T15:29:11,718   vendor/hmmer/src/p7_hit.c:471:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,719     471 |   ret_obj->sortkey = *((double *) &host_64bit);
2023-10-22T15:29:11,719         |                       ~^~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,719   vendor/hmmer/src/p7_hit.c:477:22: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,720     477 |   ret_obj->score = *((float *) &host_32bit);
2023-10-22T15:29:11,720         |                     ~^~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,720   vendor/hmmer/src/p7_hit.c:483:26: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,720     483 |   ret_obj->pre_score = *((float *) &host_32bit);
2023-10-22T15:29:11,721         |                         ~^~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,721   vendor/hmmer/src/p7_hit.c:489:26: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,721     489 |   ret_obj->sum_score = *((float *) &host_32bit);
2023-10-22T15:29:11,721         |                         ~^~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,722   vendor/hmmer/src/p7_hit.c:495:20: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,722     495 |   ret_obj->lnP = *((double *) &host_64bit);
2023-10-22T15:29:11,722         |                   ~^~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,722   vendor/hmmer/src/p7_hit.c:501:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,733     501 |   ret_obj->pre_lnP = *((double *) &host_64bit);
2023-10-22T15:29:11,733         |                       ~^~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,733   vendor/hmmer/src/p7_hit.c:507:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,734     507 |   ret_obj->sum_lnP = *((double *) &host_64bit);
2023-10-22T15:29:11,734         |                       ~^~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,734   vendor/hmmer/src/p7_hit.c:513:26: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,734     513 |   ret_obj->nexpected = *((float *) &host_32bit);
2023-10-22T15:29:11,735         |                         ~^~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,735   vendor/hmmer/src/p7_hit.c:621:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:11,735     621 |   if((ptr - (buf + *n)) !=obj_size){
2023-10-22T15:29:11,735         |                         ^~
2023-10-22T15:29:11,748   vendor/hmmer/src/p7_hmmd_search_stats.c: In function ‘p7_hmmd_search_stats_Serialize’:
2023-10-22T15:29:11,748   vendor/hmmer/src/p7_hmmd_search_stats.c:89:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,749      89 |   network_64bit = esl_hton64(*((uint64_t *) &(obj->elapsed)));  // ow, this hurts, but is probably the best way to get the
2023-10-22T15:29:11,749         |                               ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,749   vendor/hmmer/src/p7_hmmd_search_stats.c:97:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,750      97 |   network_64bit = esl_hton64(*((uint64_t *) &(obj->user)));
2023-10-22T15:29:11,750         |                               ~^~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,750   vendor/hmmer/src/p7_hmmd_search_stats.c:103:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,750     103 |   network_64bit = esl_hton64(*((uint64_t *) &(obj->sys)));
2023-10-22T15:29:11,751         |                               ~^~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,751   vendor/hmmer/src/p7_hmmd_search_stats.c:109:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,751     109 |   network_64bit = esl_hton64(*((uint64_t *) &(obj->Z)));
2023-10-22T15:29:11,752         |                               ~^~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,752   vendor/hmmer/src/p7_hmmd_search_stats.c:115:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,752     115 |   network_64bit = esl_hton64(*((uint64_t *) &(obj->domZ)));
2023-10-22T15:29:11,752         |                               ~^~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,752   vendor/hmmer/src/p7_hmmd_search_stats.c:205:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘const long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:11,753     205 |     for (i = 0; i < obj->nhits; i++)
2023-10-22T15:29:11,753         |                   ^
2023-10-22T15:29:11,753   vendor/hmmer/src/p7_hmmd_search_stats.c: In function ‘p7_hmmd_search_stats_Deserialize’:
2023-10-22T15:29:11,753   vendor/hmmer/src/p7_hmmd_search_stats.c:258:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,754     258 |   ret_obj->elapsed = *((double *) &host_64bit);
2023-10-22T15:29:11,754         |                       ~^~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,754   vendor/hmmer/src/p7_hmmd_search_stats.c:264:21: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,754     264 |   ret_obj->user = *((double *) &host_64bit);
2023-10-22T15:29:11,755         |                    ~^~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,755   vendor/hmmer/src/p7_hmmd_search_stats.c:270:20: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,755     270 |   ret_obj->sys = *((double *) &host_64bit);
2023-10-22T15:29:11,755         |                   ~^~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,756   vendor/hmmer/src/p7_hmmd_search_stats.c:276:18: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,756     276 |   ret_obj->Z = *((double *) &host_64bit);
2023-10-22T15:29:11,757         |                 ~^~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,757   vendor/hmmer/src/p7_hmmd_search_stats.c:282:21: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-10-22T15:29:11,758     282 |   ret_obj->domZ = *((double *) &host_64bit);
2023-10-22T15:29:11,759         |                    ~^~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:11,760   vendor/hmmer/src/p7_hmmd_search_stats.c:380:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:11,760     380 |     for (i = 1; i < ret_obj->nhits; i++)
2023-10-22T15:29:11,761         |                   ^
2023-10-22T15:29:11,839   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_domaindef.o from vendor/hmmer/src/p7_domaindef.c
2023-10-22T15:29:11,841   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/p7_domaindef.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_domaindef.o
2023-10-22T15:29:11,874   vendor/hmmer/src/p7_alidisplay.c: In function ‘p7_alidisplay_Deserialize’:
2023-10-22T15:29:11,875   vendor/hmmer/src/p7_alidisplay.c:725:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:11,876     725 |   if(ret_obj->memsize < (obj_size - SER_BASE_SIZE)){  // ret_obj doesn't have enough space for this P7_ALIDISPLAY
2023-10-22T15:29:11,876         |                       ^
2023-10-22T15:29:11,880   vendor/hmmer/src/p7_alidisplay.c:885:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:11,880     885 |   if(mem_ptr - ret_obj->mem != (obj_size - SER_BASE_SIZE)){
2023-10-22T15:29:11,880         |                             ^~
2023-10-22T15:29:12,100   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_hmmwindow.o from vendor/hmmer/src/p7_hmmwindow.c
2023-10-22T15:29:12,101   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/p7_hmmwindow.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_hmmwindow.o
2023-10-22T15:29:12,427   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_hmm.o from vendor/hmmer/src/p7_hmm.c
2023-10-22T15:29:12,428   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/p7_hmm.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_hmm.o
2023-10-22T15:29:12,669   vendor/hmmer/src/p7_domaindef.c: In function ‘rescore_isolated_domain’:
2023-10-22T15:29:12,669   vendor/hmmer/src/p7_domaindef.c:932:5: warning: ‘orig_L’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T15:29:12,669     932 |     p7_oprofile_ReconfigRestLength(om, orig_L);
2023-10-22T15:29:12,670         |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:12,780   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_pipeline.o from vendor/hmmer/src/p7_pipeline.c
2023-10-22T15:29:12,781   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/p7_pipeline.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_pipeline.o
2023-10-22T15:29:13,088   vendor/hmmer/src/p7_hmm.c: In function ‘p7_hmm_Validate’:
2023-10-22T15:29:13,088   vendor/hmmer/src/p7_hmm.c:1282:85: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:13,089    1282 |   if (hmm->flags & p7H_RF)   { if (hmm->rf == NULL        || strlen(hmm->rf)        != hmm->M+1) ESL_XFAIL(eslFAIL, errbuf, "p7H_RF flag up, but rf string is invalid");            }
2023-10-22T15:29:13,089         |                                                                                     ^~
2023-10-22T15:29:13,090   vendor/hmmer/src/p7_hmm.c:1285:86: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:13,090    1285 |   if (hmm->flags & p7H_MMASK) { if (hmm->mm == NULL        || strlen(hmm->mm)        != hmm->M+1) ESL_XFAIL(eslFAIL, errbuf, "p7H_MMASK flag up, but mm string is invalid");            }
2023-10-22T15:29:13,090         |                                                                                      ^~
2023-10-22T15:29:13,091   vendor/hmmer/src/p7_hmm.c:1288:85: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:13,091    1288 |   if (hmm->flags & p7H_CONS) { if (hmm->consensus == NULL || strlen(hmm->consensus) != hmm->M+1) ESL_XFAIL(eslFAIL, errbuf, "p7H_CONS flag up, but consensus string is invalid");   }
2023-10-22T15:29:13,092         |                                                                                     ^~
2023-10-22T15:29:13,093   vendor/hmmer/src/p7_hmm.c:1291:85: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:13,093    1291 |   if (hmm->flags & p7H_CS)   { if (hmm->cs == NULL        || strlen(hmm->cs)        != hmm->M+1) ESL_XFAIL(eslFAIL, errbuf, "p7H_CS flag up, but cs string is invalid");   }
2023-10-22T15:29:13,093         |                                                                                     ^~
2023-10-22T15:29:13,094   vendor/hmmer/src/p7_hmm.c:1294:85: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:13,094    1294 |   if (hmm->flags & p7H_CA)   { if (hmm->ca == NULL        || strlen(hmm->ca)        != hmm->M+1) ESL_XFAIL(eslFAIL, errbuf, "p7H_CA flag up, but ca string is invalid");   }
2023-10-22T15:29:13,095         |                                                                                     ^~
2023-10-22T15:29:13,433   In file included from vendor/hmmer/src/p7_pipeline.c:15:
2023-10-22T15:29:13,433   vendor/hmmer/src/p7_pipeline.c: In function ‘p7_pli_postSSV_LongTarget’:
2023-10-22T15:29:13,434   vendor/easel/easel.h:431:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:13,434     431 | #define ESL_MIN(a,b)          (((a)<(b))?(a):(b))
2023-10-22T15:29:13,435         |                                    ^
2023-10-22T15:29:13,435   vendor/hmmer/src/p7_pipeline.c:1407:61: note: in expansion of macro ‘ESL_MIN’
2023-10-22T15:29:13,435    1407 |            p7_hmmwindow_new(vit_windowlist, 0, new_n, 0, 0, ESL_MIN(max_window_len,new_len), 0.0, p7_NOCOMPLEMENT, new_len );
2023-10-22T15:29:13,436         |                                                             ^~~~~~~
2023-10-22T15:29:13,436   vendor/easel/easel.h:431:42: warning: operand of ‘?:’ changes signedness from ‘int’ to ‘uint32_t’ {aka ‘unsigned int’} due to unsignedness of other operand [-Wsign-compare]
2023-10-22T15:29:13,436     431 | #define ESL_MIN(a,b)          (((a)<(b))?(a):(b))
2023-10-22T15:29:13,437         |                                          ^~~
2023-10-22T15:29:13,437   vendor/hmmer/src/p7_pipeline.c:1407:61: note: in expansion of macro ‘ESL_MIN’
2023-10-22T15:29:13,437    1407 |            p7_hmmwindow_new(vit_windowlist, 0, new_n, 0, 0, ESL_MIN(max_window_len,new_len), 0.0, p7_NOCOMPLEMENT, new_len );
2023-10-22T15:29:13,437         |                                                             ^~~~~~~
2023-10-22T15:29:13,437   vendor/hmmer/src/p7_pipeline.c:1408:27: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:13,438    1408 |          } while (new_len > max_window_len);
2023-10-22T15:29:13,438         |                           ^
2023-10-22T15:29:13,444   vendor/hmmer/src/p7_pipeline.c: In function ‘p7_Pipeline_LongTarget’:
2023-10-22T15:29:13,444   vendor/hmmer/src/p7_pipeline.c:1655:46: warning: operand of ‘?:’ changes signedness from ‘int64_t’ {aka ‘const long long int’} to ‘uint64_t’ {aka ‘long long unsigned int’} due to unsignedness of other operand [-Wsign-compare]
2023-10-22T15:29:13,445    1655 |             (fmf != NULL ? seq_start       : sq->start),
2023-10-22T15:29:13,445         |                                              ^~~~~~~~~
2023-10-22T15:29:13,446   vendor/hmmer/src/p7_pipeline.c:1660:46: warning: operand of ‘?:’ changes signedness from ‘int’ to ‘uint32_t’ {aka ‘unsigned int’} due to unsignedness of other operand [-Wsign-compare]
2023-10-22T15:29:13,446    1660 |             (fmf != NULL ? seq_data.length : -1),
2023-10-22T15:29:13,446         |                                              ^~
2023-10-22T15:29:13,489   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_gbands.o from vendor/hmmer/src/p7_gbands.c
2023-10-22T15:29:13,490   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/p7_gbands.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_gbands.o
2023-10-22T15:29:13,909   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_gmx.o from vendor/hmmer/src/p7_gmx.c
2023-10-22T15:29:13,910   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/p7_gmx.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_gmx.o
2023-10-22T15:29:14,528   In file included from vendor/hmmer/src/hmmer.h:42,
2023-10-22T15:29:14,529                    from vendor/hmmer/src/p7_gmx.c:11:
2023-10-22T15:29:14,529   vendor/hmmer/src/p7_gmx.c: In function ‘p7_gmx_GrowTo’:
2023-10-22T15:29:14,530   vendor/easel/easel.h:431:36: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:14,530     431 | #define ESL_MIN(a,b)          (((a)<(b))?(a):(b))
2023-10-22T15:29:14,530         |                                    ^
2023-10-22T15:29:14,530   vendor/hmmer/src/p7_gmx.c:144:20: note: in expansion of macro ‘ESL_MIN’
2023-10-22T15:29:14,531     144 |       gx->validR = ESL_MIN(gx->ncells / gx->allocW, gx->allocR);
2023-10-22T15:29:14,531         |                    ^~~~~~~
2023-10-22T15:29:14,531   vendor/easel/easel.h:431:46: warning: operand of ‘?:’ changes signedness from ‘int’ to ‘uint64_t’ {aka ‘long long unsigned int’} due to unsignedness of other operand [-Wsign-compare]
2023-10-22T15:29:14,531     431 | #define ESL_MIN(a,b)          (((a)<(b))?(a):(b))
2023-10-22T15:29:14,531         |                                              ^~~
2023-10-22T15:29:14,532   vendor/hmmer/src/p7_gmx.c:144:20: note: in expansion of macro ‘ESL_MIN’
2023-10-22T15:29:14,532     144 |       gx->validR = ESL_MIN(gx->ncells / gx->allocW, gx->allocR);
2023-10-22T15:29:14,532         |                    ^~~~~~~
2023-10-22T15:29:14,571   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_hmmcache.o from vendor/hmmer/src/p7_hmmcache.c
2023-10-22T15:29:14,571   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/p7_hmmcache.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_hmmcache.o
2023-10-22T15:29:14,605   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_bg.o from vendor/hmmer/src/p7_bg.c
2023-10-22T15:29:14,606   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/p7_bg.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_bg.o
2023-10-22T15:29:15,031   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_spensemble.o from vendor/hmmer/src/p7_spensemble.c
2023-10-22T15:29:15,032   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/p7_spensemble.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_spensemble.o
2023-10-22T15:29:15,151   vendor/hmmer/src/p7_hmmcache.c: In function ‘p7_hmmcache_Sizeof’:
2023-10-22T15:29:15,152   vendor/hmmer/src/p7_hmmcache.c:111:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:15,152     111 |   for (i = 0; i < cache->n; i++)
2023-10-22T15:29:15,153         |                 ^
2023-10-22T15:29:15,154   vendor/hmmer/src/p7_hmmcache.c: In function ‘p7_hmmcache_SetNumericNames’:
2023-10-22T15:29:15,154   vendor/hmmer/src/p7_hmmcache.c:139:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:15,155     139 |   for (i = 0; i < cache->n; i++)
2023-10-22T15:29:15,155         |                 ^
2023-10-22T15:29:15,156   vendor/hmmer/src/p7_hmmcache.c: In function ‘p7_hmmcache_Close’:
2023-10-22T15:29:15,157   vendor/hmmer/src/p7_hmmcache.c:162:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:15,157     162 |       for (i = 0; i < cache->n; i++)
2023-10-22T15:29:15,158         |                     ^
2023-10-22T15:29:15,372   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/fm_alphabet.o from vendor/hmmer/src/fm_alphabet.c
2023-10-22T15:29:15,372   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/fm_alphabet.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/fm_alphabet.o
2023-10-22T15:29:15,671   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/ssvfilter.o from vendor/hmmer/src/impl_neon/ssvfilter.c
2023-10-22T15:29:15,672   creating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon
2023-10-22T15:29:15,673   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/impl_neon/ssvfilter.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/ssvfilter.o
2023-10-22T15:29:15,839   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_prior.o from vendor/hmmer/src/p7_prior.c
2023-10-22T15:29:15,840   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/p7_prior.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_prior.o
2023-10-22T15:29:15,935   vendor/hmmer/src/p7_spensemble.c: In function ‘p7_spensemble_Cluster’:
2023-10-22T15:29:15,935   vendor/hmmer/src/p7_spensemble.c:294:25: warning: ‘mmax’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T15:29:15,936     294 |   int imax, jmax, kmax, mmax;
2023-10-22T15:29:15,936         |                         ^~~~
2023-10-22T15:29:15,936   vendor/hmmer/src/p7_spensemble.c:363:7: warning: ‘kmax’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T15:29:15,936     363 |       for (best_k = kmin; best_k <= kmax; best_k++) if (sp->epc[best_k-kmin] >= epc_threshold) break;
2023-10-22T15:29:15,937         |       ^~~
2023-10-22T15:29:15,937   vendor/hmmer/src/p7_spensemble.c:294:13: warning: ‘jmax’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T15:29:15,937     294 |   int imax, jmax, kmax, mmax;
2023-10-22T15:29:15,938         |             ^~~~
2023-10-22T15:29:15,938   vendor/hmmer/src/p7_spensemble.c:357:7: warning: ‘imax’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T15:29:15,938     357 |       for (best_i = imin; best_i <= imax; best_i++) if (sp->epc[best_i-imin] >= epc_threshold) break;
2023-10-22T15:29:15,938         |       ^~~
2023-10-22T15:29:15,938   vendor/hmmer/src/p7_spensemble.c:375:7: warning: ‘mmin’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T15:29:15,939     375 |       for (best_m = mmax; best_m >= mmin; best_m--) if (sp->epc[best_m-mmin] >= epc_threshold) break;
2023-10-22T15:29:15,939         |       ^~~
2023-10-22T15:29:15,939   vendor/hmmer/src/p7_spensemble.c:362:82: warning: ‘kmin’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T15:29:15,940     362 |       for (h = 0; h < sp->n; h++) if (sp->assignment[h] == c) sp->epc[sp->sp[h].k-kmin]++;
2023-10-22T15:29:15,940         |                                                                       ~~~~~~~~~~~^~~~~
2023-10-22T15:29:15,940   vendor/hmmer/src/p7_spensemble.c:369:7: warning: ‘jmin’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T15:29:15,940     369 |       for (best_j = jmax; best_j >= jmin; best_j--) if (sp->epc[best_j-jmin] >= epc_threshold) break;
2023-10-22T15:29:15,941         |       ^~~
2023-10-22T15:29:16,147   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/fm_general.o from vendor/hmmer/src/fm_general.c
2023-10-22T15:29:16,148   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/fm_general.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/fm_general.o
2023-10-22T15:29:16,306   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_tophits.o from vendor/hmmer/src/p7_tophits.c
2023-10-22T15:29:16,307   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/p7_tophits.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_tophits.o
2023-10-22T15:29:16,686   vendor/hmmer/src/fm_general.c: In function ‘fm_findOverlappingAmbiguityBlock’:
2023-10-22T15:29:16,686   vendor/hmmer/src/fm_general.c:292:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,687     292 |   if (ranges[lo].lower > end)     return -1;
2023-10-22T15:29:16,687         |                        ^
2023-10-22T15:29:16,688   vendor/hmmer/src/fm_general.c:293:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,688     293 |   if (ranges[hi].upper < start)   return -1;
2023-10-22T15:29:16,688         |                        ^
2023-10-22T15:29:16,689   vendor/hmmer/src/fm_general.c:297:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,690     297 |     if      (ranges[mid].lower   < start)  lo = mid + 1; // too far left
2023-10-22T15:29:16,690         |                                  ^
2023-10-22T15:29:16,691   vendor/hmmer/src/fm_general.c:302:42: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,691     302 |   if      (lo>0 &&  ranges[lo-1].upper   >= start && ranges[lo-1].lower <= end) return lo-1;
2023-10-22T15:29:16,692         |                                          ^~
2023-10-22T15:29:16,692   vendor/hmmer/src/fm_general.c:302:73: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,693     302 |   if      (lo>0 &&  ranges[lo-1].upper   >= start && ranges[lo-1].lower <= end) return lo-1;
2023-10-22T15:29:16,693         |                                                                         ^~
2023-10-22T15:29:16,694   vendor/hmmer/src/fm_general.c:303:42: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,694     303 |   else if (         ranges[lo].upper     >= start && ranges[lo].lower   <= end) return lo;
2023-10-22T15:29:16,694         |                                          ^~
2023-10-22T15:29:16,695   vendor/hmmer/src/fm_general.c:303:73: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,695     303 |   else if (         ranges[lo].upper     >= start && ranges[lo].lower   <= end) return lo;
2023-10-22T15:29:16,696         |                                                                         ^~
2023-10-22T15:29:16,697   vendor/hmmer/src/fm_general.c: In function ‘fm_convertRange2DSQ’:
2023-10-22T15:29:16,698   vendor/hmmer/src/fm_general.c:350:20: warning: comparison of integer expressions of different signedness: ‘int32_t’ {aka ‘int’} and ‘unsigned int’ [-Wsign-compare]
2023-10-22T15:29:16,698     350 |         while (pos <= fm->ambig_offset + fm->ambig_cnt -1 && meta->ambig_list->ranges[pos].lower <= first+length-1) {
2023-10-22T15:29:16,698         |                    ^~
2023-10-22T15:29:16,699   vendor/hmmer/src/fm_general.c:350:98: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,699     350 |         while (pos <= fm->ambig_offset + fm->ambig_cnt -1 && meta->ambig_list->ranges[pos].lower <= first+length-1) {
2023-10-22T15:29:16,700         |                                                                                                  ^~
2023-10-22T15:29:16,701   In file included from vendor/hmmer/src/fm_general.c:12:
2023-10-22T15:29:16,701   vendor/easel/easel.h:432:36: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:16,702     432 | #define ESL_MAX(a,b)          (((a)>(b))?(a):(b))
2023-10-22T15:29:16,702         |                                    ^
2023-10-22T15:29:16,702   vendor/hmmer/src/fm_general.c:351:23: note: in expansion of macro ‘ESL_MAX’
2023-10-22T15:29:16,702     351 |           int start = ESL_MAX(first,          meta->ambig_list->ranges[pos].lower);
2023-10-22T15:29:16,703         |                       ^~~~~~~
2023-10-22T15:29:16,713   vendor/easel/easel.h:432:46: warning: operand of ‘?:’ changes signedness from ‘int’ to ‘uint64_t’ {aka ‘long long unsigned int’} due to unsignedness of other operand [-Wsign-compare]
2023-10-22T15:29:16,713     432 | #define ESL_MAX(a,b)          (((a)>(b))?(a):(b))
2023-10-22T15:29:16,713         |                                              ^~~
2023-10-22T15:29:16,714   vendor/hmmer/src/fm_general.c:351:23: note: in expansion of macro ‘ESL_MAX’
2023-10-22T15:29:16,714     351 |           int start = ESL_MAX(first,          meta->ambig_list->ranges[pos].lower);
2023-10-22T15:29:16,714         |                       ^~~~~~~
2023-10-22T15:29:16,714   vendor/easel/easel.h:431:36: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:16,715     431 | #define ESL_MIN(a,b)          (((a)<(b))?(a):(b))
2023-10-22T15:29:16,715         |                                    ^
2023-10-22T15:29:16,715   vendor/hmmer/src/fm_general.c:352:23: note: in expansion of macro ‘ESL_MIN’
2023-10-22T15:29:16,715     352 |           int end =   ESL_MIN(first+length-1, meta->ambig_list->ranges[pos].upper);
2023-10-22T15:29:16,716         |                       ^~~~~~~
2023-10-22T15:29:16,716   vendor/easel/easel.h:431:46: warning: operand of ‘?:’ changes signedness from ‘int’ to ‘uint64_t’ {aka ‘long long unsigned int’} due to unsignedness of other operand [-Wsign-compare]
2023-10-22T15:29:16,716     431 | #define ESL_MIN(a,b)          (((a)<(b))?(a):(b))
2023-10-22T15:29:16,717         |                                              ^~~
2023-10-22T15:29:16,717   vendor/hmmer/src/fm_general.c:352:23: note: in expansion of macro ‘ESL_MIN’
2023-10-22T15:29:16,717     352 |           int end =   ESL_MIN(first+length-1, meta->ambig_list->ranges[pos].upper);
2023-10-22T15:29:16,717         |                       ^~~~~~~
2023-10-22T15:29:16,718   vendor/hmmer/src/fm_general.c:353:27: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:16,718     353 |           for (j= start; j<=end; j++)
2023-10-22T15:29:16,718         |                           ^~
2023-10-22T15:29:16,718   vendor/hmmer/src/fm_general.c: In function ‘fm_FM_read’:
2023-10-22T15:29:16,719   vendor/hmmer/src/fm_general.c:537:75: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int32_t’ {aka ‘int’} [-Wsign-compare]
2023-10-22T15:29:16,719     537 |      (getAll && fread(fm->T, sizeof(uint8_t), compressed_bytes, meta->fp) != compressed_bytes) ||
2023-10-22T15:29:16,719         |                                                                           ^~
2023-10-22T15:29:16,719   vendor/hmmer/src/fm_general.c:538:68: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int32_t’ {aka ‘int’} [-Wsign-compare]
2023-10-22T15:29:16,720     538 |      (fread(fm->BWT, sizeof(uint8_t), compressed_bytes, meta->fp)  != compressed_bytes) ||
2023-10-22T15:29:16,720         |                                                                    ^~
2023-10-22T15:29:16,721   vendor/hmmer/src/fm_general.c: In function ‘fm_readFMmeta’:
2023-10-22T15:29:16,722   vendor/hmmer/src/fm_general.c:620:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,722     620 |   for (i=0; i<meta->seq_count; i++) {
2023-10-22T15:29:16,723         |              ^
2023-10-22T15:29:16,726   vendor/hmmer/src/fm_general.c:638:101: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:16,726     638 |         fread(meta->seq_data[i].name,   sizeof(char), meta->seq_data[i].name_length+1   , meta->fp) !=  meta->seq_data[i].name_length+1  ||
2023-10-22T15:29:16,727         |                                                                                                     ^~
2023-10-22T15:29:16,728   vendor/hmmer/src/fm_general.c:639:101: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:16,728     639 |         fread(meta->seq_data[i].acc,    sizeof(char), meta->seq_data[i].acc_length+1    , meta->fp) !=  meta->seq_data[i].acc_length+1  ||
2023-10-22T15:29:16,728         |                                                                                                     ^~
2023-10-22T15:29:16,729   vendor/hmmer/src/fm_general.c:640:101: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:16,730     640 |         fread(meta->seq_data[i].source, sizeof(char), meta->seq_data[i].source_length+1 , meta->fp) !=  meta->seq_data[i].source_length+1  ||
2023-10-22T15:29:16,730         |                                                                                                     ^~
2023-10-22T15:29:16,731   vendor/hmmer/src/fm_general.c:641:101: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:16,731     641 |         fread(meta->seq_data[i].desc,   sizeof(char), meta->seq_data[i].desc_length+1   , meta->fp) !=  meta->seq_data[i].desc_length+1
2023-10-22T15:29:16,732         |                                                                                                     ^~
2023-10-22T15:29:16,733   vendor/hmmer/src/fm_general.c:651:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,734     651 |   for (i=0; i<meta->ambig_list->count; i++) {
2023-10-22T15:29:16,734         |              ^
2023-10-22T15:29:16,743   vendor/hmmer/src/fm_general.c:663:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,743     663 |     for (i=0; i<meta->seq_count; i++)
2023-10-22T15:29:16,743         |                ^
2023-10-22T15:29:16,743   vendor/hmmer/src/fm_general.c: In function ‘fm_metaDestroy’:
2023-10-22T15:29:16,744   vendor/hmmer/src/fm_general.c:727:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,744     727 |     for (i=0; i<meta->seq_count; i++) {
2023-10-22T15:29:16,744         |                ^
2023-10-22T15:29:16,819   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_profile.o from vendor/hmmer/src/p7_profile.c
2023-10-22T15:29:16,820   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/p7_profile.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_profile.o
2023-10-22T15:29:16,875   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_Clone’:
2023-10-22T15:29:16,876   vendor/hmmer/src/p7_tophits.c:92:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,876      92 |   for (i = 0; i < h2->N; i++) {
2023-10-22T15:29:16,877         |                 ^
2023-10-22T15:29:16,877   vendor/hmmer/src/p7_tophits.c:100:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,877     100 |   for (i = 0; i < h2->N; i++) {
2023-10-22T15:29:16,878         |                 ^
2023-10-22T15:29:16,878   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_Grow’:
2023-10-22T15:29:16,878   vendor/hmmer/src/p7_tophits.c:143:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,879     143 |       for (i = 0; i < h->N; i++)
2023-10-22T15:29:16,879         |                     ^
2023-10-22T15:29:16,882   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_SortBySortkey’:
2023-10-22T15:29:16,883   vendor/hmmer/src/p7_tophits.c:398:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,883     398 |   for (i = 0; i < h->N; i++) h->hit[i] = h->unsrt + i;
2023-10-22T15:29:16,883         |                 ^
2023-10-22T15:29:16,884   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_SortBySeqidxAndAlipos’:
2023-10-22T15:29:16,884   vendor/hmmer/src/p7_tophits.c:431:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,884     431 |   for (i = 0; i < h->N; i++) h->hit[i] = h->unsrt + i;
2023-10-22T15:29:16,884         |                 ^
2023-10-22T15:29:16,885   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_SortByModelnameAndAlipos’:
2023-10-22T15:29:16,885   vendor/hmmer/src/p7_tophits.c:452:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,885     452 |   for (i = 0; i < h->N; i++) h->hit[i] = h->unsrt + i;
2023-10-22T15:29:16,885         |                 ^
2023-10-22T15:29:16,886   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_Merge’:
2023-10-22T15:29:16,886   vendor/hmmer/src/p7_tophits.c:496:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,886     496 |   for (i = 0; i < h1->N; i++)
2023-10-22T15:29:16,887         |                 ^
2023-10-22T15:29:16,887   vendor/hmmer/src/p7_tophits.c:504:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,887     504 |   for (i=0,j=0,k=0; i < h1->N && j < h2->N ; k++)
2023-10-22T15:29:16,887         |                       ^
2023-10-22T15:29:16,888   vendor/hmmer/src/p7_tophits.c:504:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,888     504 |   for (i=0,j=0,k=0; i < h1->N && j < h2->N ; k++)
2023-10-22T15:29:16,888         |                                    ^
2023-10-22T15:29:16,888   vendor/hmmer/src/p7_tophits.c:506:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,889     506 |   while (i < h1->N) new_hit[k++] = h1->hit[i++];
2023-10-22T15:29:16,889         |            ^
2023-10-22T15:29:16,889   vendor/hmmer/src/p7_tophits.c:507:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,889     507 |   while (j < h2->N) new_hit[k++] = new2 + (h2->hit[j++] - h2->unsrt);
2023-10-22T15:29:16,890         |            ^
2023-10-22T15:29:16,890   vendor/hmmer/src/p7_tophits.c:511:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,890     511 |   for (i = 0; i < h2->N; i++)
2023-10-22T15:29:16,890         |                 ^
2023-10-22T15:29:16,891   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_GetMaxPositionLength’:
2023-10-22T15:29:16,891   vendor/hmmer/src/p7_tophits.c:559:17: warning: comparison of integer expressions of different signedness: ‘int64_t’ {aka ‘long long int’} and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,891     559 |   for (i = 0; i < h->N; i++) {
2023-10-22T15:29:16,891         |                 ^
2023-10-22T15:29:16,892   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_GetMaxNameLength’:
2023-10-22T15:29:16,892   vendor/hmmer/src/p7_tophits.c:589:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,892     589 |   for (max = 0, i = 0; i < h->N; i++)
2023-10-22T15:29:16,892         |                          ^
2023-10-22T15:29:16,903   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_GetMaxAccessionLength’:
2023-10-22T15:29:16,903   vendor/hmmer/src/p7_tophits.c:608:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,903     608 |   for (max = 0, i = 0; i < h->N; i++)
2023-10-22T15:29:16,904         |                          ^
2023-10-22T15:29:16,904   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_GetMaxShownLength’:
2023-10-22T15:29:16,904   vendor/hmmer/src/p7_tophits.c:630:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,905     630 |   for (max = 0, i = 0; i < h->N; i++)
2023-10-22T15:29:16,905         |                          ^
2023-10-22T15:29:16,905   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_Reuse’:
2023-10-22T15:29:16,906   vendor/hmmer/src/p7_tophits.c:663:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,906     663 |     for (i = 0; i < h->N; i++)
2023-10-22T15:29:16,906         |                   ^
2023-10-22T15:29:16,907   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_Destroy’:
2023-10-22T15:29:16,907   vendor/hmmer/src/p7_tophits.c:693:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,908     693 |     for (i = 0; i < h->N; i++)
2023-10-22T15:29:16,908         |                   ^
2023-10-22T15:29:16,908   vendor/hmmer/src/p7_tophits.c: In function ‘workaround_bug_h74’:
2023-10-22T15:29:16,909   vendor/hmmer/src/p7_tophits.c:762:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,909     762 |   for (h = 0; h < th->N; h++)
2023-10-22T15:29:16,909         |                 ^
2023-10-22T15:29:16,910   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_ComputeNhmmerEvalues’:
2023-10-22T15:29:16,910   vendor/hmmer/src/p7_tophits.c:800:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,911     800 |   for (i = 0; i < th->N ; i++)
2023-10-22T15:29:16,911         |                 ^
2023-10-22T15:29:16,911   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_RemoveDuplicates’:
2023-10-22T15:29:16,912   vendor/hmmer/src/p7_tophits.c:836:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,912     836 |   for (i = 1; i < th->N; i++)
2023-10-22T15:29:16,927         |                 ^
2023-10-22T15:29:16,927   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_Threshold’:
2023-10-22T15:29:16,928   vendor/hmmer/src/p7_tophits.c:935:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,928     935 |     for (h = 0; h < th->N; h++)
2023-10-22T15:29:16,928         |                   ^
2023-10-22T15:29:16,928   vendor/hmmer/src/p7_tophits.c:956:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,929     956 |   for (h = 0; h < th->N; h++)
2023-10-22T15:29:16,929         |                 ^
2023-10-22T15:29:16,929   vendor/hmmer/src/p7_tophits.c:974:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,929     974 |     for (h = 0; h < th->N; h++)
2023-10-22T15:29:16,929         |                   ^
2023-10-22T15:29:16,930   vendor/hmmer/src/p7_tophits.c:991:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,930     991 |   for (h = 0; h < th->N; h++) {
2023-10-22T15:29:16,930         |                 ^
2023-10-22T15:29:16,930   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_CompareRanking’:
2023-10-22T15:29:16,930   vendor/hmmer/src/p7_tophits.c:1069:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,931    1069 |   for (h = 0; h < th->N; h++)
2023-10-22T15:29:16,931         |                 ^
2023-10-22T15:29:16,931   vendor/hmmer/src/p7_tophits.c:1085:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,931    1085 |   for (h = 0; h < th->N; h++)
2023-10-22T15:29:16,932         |                 ^
2023-10-22T15:29:16,932   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_Targets’:
2023-10-22T15:29:16,932   vendor/hmmer/src/p7_tophits.c:1173:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,932    1173 |   for (h = 0; h < th->N; h++)
2023-10-22T15:29:16,938         |                 ^
2023-10-22T15:29:16,938   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_Domains’:
2023-10-22T15:29:16,938   vendor/hmmer/src/p7_tophits.c:1289:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,939    1289 |   for (h = 0; h < th->N; h++)
2023-10-22T15:29:16,939         |                 ^
2023-10-22T15:29:16,939   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_Alignment’:
2023-10-22T15:29:16,939   vendor/hmmer/src/p7_tophits.c:1528:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘const long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,940    1528 |   for (h = 0; h < th->N; h++)
2023-10-22T15:29:16,940         |                 ^
2023-10-22T15:29:16,940   vendor/hmmer/src/p7_tophits.c:1554:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘const long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,940    1554 |   for (h = 0; h < th->N; h++)
2023-10-22T15:29:16,941         |                 ^
2023-10-22T15:29:16,945   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_TabularTargets’:
2023-10-22T15:29:16,945   vendor/hmmer/src/p7_tophits.c:1643:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,946    1643 |   for (h = 0; h < th->N; h++)
2023-10-22T15:29:16,946         |                 ^
2023-10-22T15:29:16,951   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_TabularDomains’:
2023-10-22T15:29:16,952   vendor/hmmer/src/p7_tophits.c:1736:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,953    1736 |   for (h = 0; h < th->N; h++)
2023-10-22T15:29:16,953         |                 ^
2023-10-22T15:29:16,957   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_TabularXfam’:
2023-10-22T15:29:16,958   vendor/hmmer/src/p7_tophits.c:1838:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,958    1838 |     for (h = 0; h < th->N; h++)
2023-10-22T15:29:16,958         |                   ^
2023-10-22T15:29:16,961   vendor/hmmer/src/p7_tophits.c:1872:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,961    1872 |       for (h = 0; h < th->N; h++)
2023-10-22T15:29:16,962         |                     ^
2023-10-22T15:29:16,964   vendor/hmmer/src/p7_tophits.c:1893:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,964    1893 |       for (h = 0; h < th->N; h++)
2023-10-22T15:29:16,964         |                     ^
2023-10-22T15:29:16,967   vendor/hmmer/src/p7_tophits.c:1927:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,967    1927 |       for (h = 0; h < domHitlist->N; h++)
2023-10-22T15:29:16,967         |                     ^
2023-10-22T15:29:16,968   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_AliScores’:
2023-10-22T15:29:16,969   vendor/hmmer/src/p7_tophits.c:1980:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:16,969    1980 |   for (h = 0; h < th->N; h++) {
2023-10-22T15:29:16,970         |                 ^
2023-10-22T15:29:17,727   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/fm_sse.o from vendor/hmmer/src/fm_sse.c
2023-10-22T15:29:17,728   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/fm_sse.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/fm_sse.o
2023-10-22T15:29:18,146   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/fwdback.o from vendor/hmmer/src/impl_neon/fwdback.c
2023-10-22T15:29:18,147   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/impl_neon/fwdback.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/fwdback.o
2023-10-22T15:29:18,347   vendor/hmmer/src/fm_sse.c: In function ‘fm_getOccCount’:
2023-10-22T15:29:18,348   vendor/hmmer/src/fm_sse.c:201:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘const long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:18,349     201 |   if (landmark >= fm->N) { // special case: for a count in the final block, just count from the bottom
2023-10-22T15:29:18,349         |                ^~
2023-10-22T15:29:18,350   vendor/hmmer/src/fm_sse.c: In function ‘fm_getOccCountLT’:
2023-10-22T15:29:18,351   vendor/hmmer/src/fm_sse.c:389:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘const long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:18,351     389 |   if (landmark >= fm->N) { // special case: for a count in the final block, just count from the bottom
2023-10-22T15:29:18,352         |                ^~
2023-10-22T15:29:18,353   vendor/hmmer/src/fm_sse.c:404:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:29:18,354     404 |   } else if ( b_pos !=  sb_pos * (meta->freq_cnt_sb / meta->freq_cnt_b))  {
2023-10-22T15:29:18,354         |                     ^~
2023-10-22T15:29:18,354   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_Targets’:
2023-10-22T15:29:18,354   vendor/hmmer/src/p7_tophits.c:1200:12: warning: ‘posw’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T15:29:18,355    1200 |        if (fprintf(ofp, "%c %9.2g %6.1f %5.1f  %-*s %*" PRId64 " %*" PRId64 "",
2023-10-22T15:29:18,355         |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:18,355    1201 |      newness,
2023-10-22T15:29:18,356         |      ~~~~~~~~
2023-10-22T15:29:18,356    1202 |      exp(th->hit[h]->lnP), // * pli->Z,
2023-10-22T15:29:18,356         |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:18,357    1203 |      th->hit[h]->score,
2023-10-22T15:29:18,357         |      ~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:18,357    1204 |      eslCONST_LOG2R * th->hit[h]->dcl[d].dombias, // an nhmmer hit is really a domain, so this is the hit's bias correction
2023-10-22T15:29:18,358         |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:18,358    1205 |      namew, showname,
2023-10-22T15:29:18,358         |      ~~~~~~~~~~~~~~~~
2023-10-22T15:29:18,359    1206 |      posw, th->hit[h]->dcl[d].iali,
2023-10-22T15:29:18,359         |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:18,359    1207 |      posw, th->hit[h]->dcl[d].jali) < 0)
2023-10-22T15:29:18,360         |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:18,523   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/fm_ssv.o from vendor/hmmer/src/fm_ssv.c
2023-10-22T15:29:18,523   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/fm_ssv.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/fm_ssv.o
2023-10-22T15:29:19,185   vendor/hmmer/src/fm_ssv.c: In function ‘FM_mergeSeeds’:
2023-10-22T15:29:19,185   vendor/hmmer/src/fm_ssv.c:70:33: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:19,186      70 |           && ( next.n - next.k) == curr_diagval                 //overlapping diagonals will share the same value of (n - k)
2023-10-22T15:29:19,186         |                                 ^~
2023-10-22T15:29:19,187   vendor/hmmer/src/fm_ssv.c:71:35: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:19,188      71 |           && next.n + next.length < curr_n + curr_len + ssv_length       //overlapping, or close to it
2023-10-22T15:29:19,188         |                                   ^
2023-10-22T15:29:19,190   vendor/hmmer/src/fm_ssv.c: In function ‘FM_backtrackSeed’:
2023-10-22T15:29:19,191   vendor/hmmer/src/fm_ssv.c:134:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘const unsigned int’} [-Wsign-compare]
2023-10-22T15:29:19,191     134 |   while ( j != fmf->term_loc && (j % fm_cfg->meta->freq_SA)) { //go until we hit a position in the full SA that was sampled during FM index construction
2023-10-22T15:29:19,192         |             ^~
2023-10-22T15:29:19,193   vendor/hmmer/src/fm_ssv.c:141:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘const unsigned int’} [-Wsign-compare]
2023-10-22T15:29:19,194     141 |   return len + (j==fmf->term_loc ? 0 : fmf->SA[ j / fm_cfg->meta->freq_SA ]) ; // len is how many backward steps we had to take to find a sampled SA position
2023-10-22T15:29:19,195         |                  ^~
2023-10-22T15:29:19,207   vendor/hmmer/src/fm_ssv.c: In function ‘FM_extendSeed’:
2023-10-22T15:29:19,208   vendor/hmmer/src/fm_ssv.c:664:18: warning: comparison of integer expressions of different signedness: ‘int64_t’ {aka ‘long long int’} and ‘long long unsigned int’ [-Wsign-compare]
2023-10-22T15:29:19,208     664 |   if (target_end > fm->N-2) {
2023-10-22T15:29:19,208         |                  ^
2023-10-22T15:29:19,210   vendor/hmmer/src/fm_ssv.c:678:14: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int32_t’ {aka ‘int’} [-Wsign-compare]
2023-10-22T15:29:19,210     678 |   for (  ; k <= model_end; k++, n++) {
2023-10-22T15:29:19,210         |              ^~
2023-10-22T15:29:19,765   vendor/hmmer/src/fm_ssv.c: In function ‘p7_SSVFM_longlarget’:
2023-10-22T15:29:19,766   vendor/hmmer/src/fm_ssv.c:696:31: warning: ‘max_hit_end’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T15:29:19,766     696 |   diag->length  = max_hit_end - max_hit_start + 1;
2023-10-22T15:29:19,766         |                   ~~~~~~~~~~~~^~~~~~~~~~~~~~~
2023-10-22T15:29:19,766   vendor/hmmer/src/fm_ssv.c:647:37: note: ‘max_hit_end’ was declared here
2023-10-22T15:29:19,766     647 |   int64_t hit_start, max_hit_start, max_hit_end;
2023-10-22T15:29:19,767         |                                     ^~~~~~~~~~~
2023-10-22T15:29:19,767   vendor/hmmer/src/fm_ssv.c:695:32: warning: ‘max_hit_start’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T15:29:19,767     695 |   diag->k       = model_start  + max_hit_start - 1;
2023-10-22T15:29:19,768         |                   ~~~~~~~~~~~~~^~~~~~~~~~~~~~~
2023-10-22T15:29:19,768   vendor/hmmer/src/fm_ssv.c:647:22: note: ‘max_hit_start’ was declared here
2023-10-22T15:29:19,768     647 |   int64_t hit_start, max_hit_start, max_hit_end;
2023-10-22T15:29:19,769         |                      ^~~~~~~~~~~~~
2023-10-22T15:29:19,779   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/msvfilter.o from vendor/hmmer/src/impl_neon/msvfilter.c
2023-10-22T15:29:19,780   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/impl_neon/msvfilter.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/msvfilter.o
2023-10-22T15:29:20,175   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_trace.o from vendor/hmmer/src/p7_trace.c
2023-10-22T15:29:20,177   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/p7_trace.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_trace.o
2023-10-22T15:29:20,247   generating build/temp.linux-armv7l-cpython-39/build/temp.linux-armv7l-cpython-39/p7_hmmfile.o from build/temp.linux-armv7l-cpython-39/p7_hmmfile.c
2023-10-22T15:29:20,248   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c build/temp.linux-armv7l-cpython-39/p7_hmmfile.c -o build/temp.linux-armv7l-cpython-39/build/temp.linux-armv7l-cpython-39/p7_hmmfile.o
2023-10-22T15:29:20,867   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/optacc.o from vendor/hmmer/src/impl_neon/optacc.c
2023-10-22T15:29:20,868   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/impl_neon/optacc.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/optacc.o
2023-10-22T15:29:20,925   build/temp.linux-armv7l-cpython-39/p7_hmmfile.c: In function ‘p7_hmmfile_WriteBinary’:
2023-10-22T15:29:20,926   build/temp.linux-armv7l-cpython-39/p7_hmmfile.c:1026:70: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:20,926    1026 |     if (fwrite((char *) hmm->mat[k], sizeof(float), hmm->abc->K, fp) != hmm->abc->K) ESL_EXCEPTION_SYS(eslEWRITE, "hmm binary write failed");
2023-10-22T15:29:20,926         |                                                                      ^~
2023-10-22T15:29:20,927   build/temp.linux-armv7l-cpython-39/p7_hmmfile.c:1028:70: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:20,927    1028 |     if (fwrite((char *) hmm->ins[k], sizeof(float), hmm->abc->K, fp) != hmm->abc->K) ESL_EXCEPTION_SYS(eslEWRITE, "hmm binary write failed");
2023-10-22T15:29:20,928         |                                                                      ^~
2023-10-22T15:29:20,930   build/temp.linux-armv7l-cpython-39/p7_hmmfile.c:1037:95: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:20,930    1037 |   if ((hmm->flags & p7H_RF)   && (fwrite((char *) hmm->rf,        sizeof(char), hmm->M+2, fp) != hmm->M+2)) ESL_EXCEPTION_SYS(eslEWRITE, "hmm binary write failed"); /* +2: 1..M and trailing \0 */
2023-10-22T15:29:20,930         |                                                                                               ^~
2023-10-22T15:29:20,931   build/temp.linux-armv7l-cpython-39/p7_hmmfile.c:1038:95: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:20,931    1038 |   if ((hmm->flags & p7H_MMASK)&& (fwrite((char *) hmm->mm,        sizeof(char), hmm->M+2, fp) != hmm->M+2)) ESL_EXCEPTION_SYS(eslEWRITE, "hmm binary write failed"); /* +2: 1..M and trailing \0 */
2023-10-22T15:29:20,931         |                                                                                               ^~
2023-10-22T15:29:20,932   build/temp.linux-armv7l-cpython-39/p7_hmmfile.c:1039:95: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:20,932    1039 |   if ((hmm->flags & p7H_CONS) && (fwrite((char *) hmm->consensus, sizeof(char), hmm->M+2, fp) != hmm->M+2)) ESL_EXCEPTION_SYS(eslEWRITE, "hmm binary write failed"); /* don't need to test for >=3e format; p7H_CONS flag suffices (didn't exist pre-3e) */
2023-10-22T15:29:20,932         |                                                                                               ^~
2023-10-22T15:29:20,933   build/temp.linux-armv7l-cpython-39/p7_hmmfile.c:1040:95: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:20,933    1040 |   if ((hmm->flags & p7H_CS)   && (fwrite((char *) hmm->cs,        sizeof(char), hmm->M+2, fp) != hmm->M+2)) ESL_EXCEPTION_SYS(eslEWRITE, "hmm binary write failed");
2023-10-22T15:29:20,933         |                                                                                               ^~
2023-10-22T15:29:20,934   build/temp.linux-armv7l-cpython-39/p7_hmmfile.c:1041:95: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:20,934    1041 |   if ((hmm->flags & p7H_CA)   && (fwrite((char *) hmm->ca,        sizeof(char), hmm->M+2, fp) != hmm->M+2)) ESL_EXCEPTION_SYS(eslEWRITE, "hmm binary write failed");
2023-10-22T15:29:20,935         |                                                                                               ^~
2023-10-22T15:29:20,937   build/temp.linux-armv7l-cpython-39/p7_hmmfile.c:1047:95: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:20,937    1047 |   if ((hmm->flags & p7H_MAP)  && (fwrite((char *) hmm->map,       sizeof(int),  hmm->M+1, fp) != hmm->M+1)) ESL_EXCEPTION_SYS(eslEWRITE, "hmm binary write failed");
2023-10-22T15:29:20,937         |                                                                                               ^~
2023-10-22T15:29:20,939   build/temp.linux-armv7l-cpython-39/p7_hmmfile.c:1064:96: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:20,939    1064 |   if ((hmm->flags & p7H_COMPO) && (fwrite((char *) hmm->compo, sizeof(float), hmm->abc->K, fp) != hmm->abc->K)) ESL_EXCEPTION_SYS(eslEWRITE, "hmm binary write failed");
2023-10-22T15:29:20,939         |                                                                                                ^~
2023-10-22T15:29:21,001   build/temp.linux-armv7l-cpython-39/p7_hmmfile.c: In function ‘multiline’:
2023-10-22T15:29:21,003   build/temp.linux-armv7l-cpython-39/p7_hmmfile.c:2022:44: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:21,003    2022 |   if (fwrite(sptr, sizeof(char), n, fp)    != n) ESL_EXCEPTION_SYS(eslEWRITE, "hmm write failed");  /* using fwrite lets us write fixed # of chars   */
2023-10-22T15:29:21,004         |                                            ^~
2023-10-22T15:29:21,009   build/temp.linux-armv7l-cpython-39/p7_hmmfile.c: In function ‘write_bin_string’:
2023-10-22T15:29:21,010   build/temp.linux-armv7l-cpython-39/p7_hmmfile.c:2145:56: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:21,011    2145 |       if (fwrite((char *) s,    sizeof(char), len, fp) != len) ESL_EXCEPTION_SYS(eslEWRITE, "hmm binary write failed");
2023-10-22T15:29:21,011         |                                                        ^~
2023-10-22T15:29:22,053   vendor/hmmer/src/impl_neon/optacc.c: In function ‘p7_OATrace’:
2023-10-22T15:29:22,053   vendor/hmmer/src/impl_neon/optacc.c:254:21: warning: ‘kmax’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T15:29:22,054     254 |       if ((status = p7_trace_AppendWithPP(tr, s1, k, i, postprob)) != eslOK) return status;
2023-10-22T15:29:22,054         |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-22T15:29:22,054   vendor/hmmer/src/impl_neon/optacc.c:397:10: warning: ‘smax’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-10-22T15:29:22,055     397 |   int    smax, kmax;
2023-10-22T15:29:22,055         |          ^~~~
2023-10-22T15:29:22,581   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/io.o from vendor/hmmer/src/impl_neon/io.c
2023-10-22T15:29:22,581   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/impl_neon/io.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/io.o
2023-10-22T15:29:22,799   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_scoredata.o from vendor/hmmer/src/p7_scoredata.c
2023-10-22T15:29:22,800   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/p7_scoredata.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_scoredata.o
2023-10-22T15:29:23,244   vendor/hmmer/src/impl_neon/io.c: In function ‘p7_oprofile_Write’:
2023-10-22T15:29:23,244   vendor/hmmer/src/impl_neon/io.c:100:77: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:23,245     100 |   if (fwrite((char *) om->name,         sizeof(char),     n+1,         ffp) != n+1)         ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-10-22T15:29:23,245         |                                                                             ^~
2023-10-22T15:29:23,246   vendor/hmmer/src/impl_neon/io.c:110:80: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:23,247     110 |     if (fwrite( (char *) om->sbv[x],    sizeof(uint8x16_t),  Q16x,        ffp) != Q16x)        ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-10-22T15:29:23,247         |                                                                                ^~
2023-10-22T15:29:23,247   vendor/hmmer/src/impl_neon/io.c:113:80: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:23,248     113 |     if (fwrite( (char *) om->rbv[x],    sizeof(uint8x16_t),  Q16,         ffp) != Q16)         ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-10-22T15:29:23,248         |                                                                                ^~
2023-10-22T15:29:23,249   vendor/hmmer/src/impl_neon/io.c:125:77: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:23,249     125 |   if (fwrite((char *) om->name,         sizeof(char),     n+1,         pfp) != n+1)         ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-10-22T15:29:23,249         |                                                                             ^~
2023-10-22T15:29:23,250   vendor/hmmer/src/impl_neon/io.c:133:77: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:23,250     133 |     if (fwrite((char *) om->acc,        sizeof(char),     n+1,         pfp) != n+1)         ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-10-22T15:29:23,250         |                                                                             ^~
2023-10-22T15:29:23,251   vendor/hmmer/src/impl_neon/io.c:142:77: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:23,251     142 |     if (fwrite((char *) om->desc,       sizeof(char),     n+1,         pfp) != n+1)         ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-10-22T15:29:23,251         |                                                                             ^~
2023-10-22T15:29:23,252   vendor/hmmer/src/impl_neon/io.c:145:77: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:23,252     145 |   if (fwrite((char *) om->rf,           sizeof(char),     om->M+2,     pfp) != om->M+2)     ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-10-22T15:29:23,252         |                                                                             ^~
2023-10-22T15:29:23,253   vendor/hmmer/src/impl_neon/io.c:146:77: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:23,253     146 |   if (fwrite((char *) om->mm,           sizeof(char),     om->M+2,     pfp) != om->M+2)     ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-10-22T15:29:23,253         |                                                                             ^~
2023-10-22T15:29:23,254   vendor/hmmer/src/impl_neon/io.c:147:77: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:23,254     147 |   if (fwrite((char *) om->cs,           sizeof(char),     om->M+2,     pfp) != om->M+2)     ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-10-22T15:29:23,254         |                                                                             ^~
2023-10-22T15:29:23,255   vendor/hmmer/src/impl_neon/io.c:148:77: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:23,255     148 |   if (fwrite((char *) om->consensus,    sizeof(char),     om->M+2,     pfp) != om->M+2)     ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-10-22T15:29:23,255         |                                                                             ^~
2023-10-22T15:29:23,256   vendor/hmmer/src/impl_neon/io.c:151:82: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:23,256     151 |   if (fwrite((char *) om->twv,             sizeof(int16x8_t),  8*Q8,        pfp) != 8*Q8)        ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-10-22T15:29:23,256         |                                                                                  ^~
2023-10-22T15:29:23,257   vendor/hmmer/src/impl_neon/io.c:153:82: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:23,257     153 |     if (fwrite( (char *) om->rwv[x],       sizeof(int16x8_t),  Q8,          pfp) != Q8)          ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-10-22T15:29:23,257         |                                                                                  ^~
2023-10-22T15:29:23,258   vendor/hmmer/src/impl_neon/io.c:162:82: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:23,258     162 |   if (fwrite((char *) om->tfv,          sizeof(float32x4_t),   8*Q4,        pfp) != 8*Q4)        ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-10-22T15:29:23,258         |                                                                                  ^~
2023-10-22T15:29:23,259   vendor/hmmer/src/impl_neon/io.c:164:82: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-22T15:29:23,259     164 |     if (fwrite( (char *) om->rfv[x],    sizeof(float32x4_t),   Q4,          pfp) != Q4)          ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-10-22T15:29:23,259         |                                                                                  ^~
2023-10-22T15:29:24,154   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/hmmpgmd2msa.o from vendor/hmmer/src/hmmpgmd2msa.c
2023-10-22T15:29:24,155   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/hmmpgmd2msa.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/hmmpgmd2msa.o
2023-10-22T15:29:24,448   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/stotrace.o from vendor/hmmer/src/impl_neon/stotrace.c
2023-10-22T15:29:24,448   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/impl_neon/stotrace.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/stotrace.o
2023-10-22T15:29:24,793   vendor/hmmer/src/hmmpgmd2msa.c: In function ‘hmmpgmd2msa’:
2023-10-22T15:29:24,794   vendor/hmmer/src/hmmpgmd2msa.c:131:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:24,794     131 |   for (i = 0; i < stats->nhits; ++i) {
2023-10-22T15:29:24,795         |                 ^
2023-10-22T15:29:24,795   vendor/hmmer/src/hmmpgmd2msa.c:144:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:24,795     144 |   for (i=0; i<stats->nhits; i++) {
2023-10-22T15:29:24,796         |              ^
2023-10-22T15:29:24,796   vendor/hmmer/src/hmmpgmd2msa.c:163:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:24,796     163 |     for (i = 0; i < th->N; i++) {
2023-10-22T15:29:24,797         |                   ^
2023-10-22T15:29:24,797   vendor/hmmer/src/hmmpgmd2msa.c:172:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:24,797     172 |   for (i = 0; i < th->N; i++) {
2023-10-22T15:29:24,797         |                 ^
2023-10-22T15:29:24,800   vendor/hmmer/src/hmmpgmd2msa.c: In function ‘hmmpgmd2stats_old’:
2023-10-22T15:29:24,800   vendor/hmmer/src/hmmpgmd2msa.c:311:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:24,801     311 |   for (i=0; i<stats->nhits; i++) {
2023-10-22T15:29:24,801         |              ^
2023-10-22T15:29:24,801   vendor/hmmer/src/hmmpgmd2msa.c:327:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:24,802     327 |   for (i = 0; i < th.N; i++)
2023-10-22T15:29:24,802         |                 ^
2023-10-22T15:29:24,805   vendor/hmmer/src/hmmpgmd2msa.c:450:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:24,806     450 |   for (i = 0; i < th.N; i++) {
2023-10-22T15:29:24,806         |                 ^
2023-10-22T15:29:24,807   vendor/hmmer/src/hmmpgmd2msa.c:473:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-10-22T15:29:24,807     473 |   for (i = 0; i < th.N; i++) {
2023-10-22T15:29:24,808         |                 ^
2023-10-22T15:29:25,562   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/vitfilter.o from vendor/hmmer/src/impl_neon/vitfilter.c
2023-10-22T15:29:25,562   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/impl_neon/vitfilter.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/vitfilter.o
2023-10-22T15:29:26,804   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/decoding.o from vendor/hmmer/src/impl_neon/decoding.c
2023-10-22T15:29:26,804   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/impl_neon/decoding.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/decoding.o
2023-10-22T15:30:02,132   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/mpi.o from vendor/hmmer/src/impl_neon/mpi.c
2023-10-22T15:30:02,133   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/impl_neon/mpi.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/mpi.o
2023-10-22T15:30:02,209   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/p7_omx.o from vendor/hmmer/src/impl_neon/p7_omx.c
2023-10-22T15:30:02,210   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/impl_neon/p7_omx.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/p7_omx.o
2023-10-22T15:30:03,418   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/p7_oprofile.o from vendor/hmmer/src/impl_neon/p7_oprofile.c
2023-10-22T15:30:03,418   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/impl_neon/p7_oprofile.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/p7_oprofile.o
2023-10-22T15:30:06,438   generating build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/null2.o from vendor/hmmer/src/impl_neon/null2.c
2023-10-22T15:30:06,438   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c vendor/hmmer/src/impl_neon/null2.c -o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/null2.o
2023-10-22T15:30:07,105   arm-linux-gnueabihf-gcc-ar rcs build/temp.linux-armv7l-cpython-39/libhmmer.a build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/build.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/cachedb.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/cachedb_shard.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/emit.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/errors.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/evalues.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/eweight.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/generic_decoding.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/generic_fwdback.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/generic_fwdback_chk.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/generic_fwdback_banded.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/generic_null2.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/generic_msv.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/generic_optacc.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/generic_stotrace.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/generic_viterbi.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/generic_vtrace.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/h2_io.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/heatmap.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/hmmlogo.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/hmmdmstr.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/hmmdmstr_shard.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/hmmd_search_status.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/hmmdwrkr.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/hmmdwrkr_shard.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/hmmdutils.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/hmmer.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/logsum.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/modelconfig.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/modelstats.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/mpisupport.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/seqmodel.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/tracealign.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_alidisplay.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_bg.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_builder.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_domain.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_domaindef.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_gbands.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_gmx.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_gmxb.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_gmxchk.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_hit.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_hmm.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_hmmcache.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_hmmd_search_stats.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_hmmwindow.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_pipeline.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_prior.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_profile.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_spensemble.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_tophits.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_trace.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/p7_scoredata.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/hmmpgmd2msa.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/fm_alphabet.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/fm_general.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/fm_sse.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/fm_ssv.o build/temp.linux-armv7l-cpython-39/build/temp.linux-armv7l-cpython-39/p7_hmmfile.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/ssvfilter.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/mpi.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/p7_omx.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/p7_oprofile.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/null2.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/fwdback.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/msvfilter.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/optacc.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/io.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/stotrace.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/vitfilter.o build/temp.linux-armv7l-cpython-39/vendor/hmmer/src/impl_neon/decoding.o
2023-10-22T15:30:07,308   running build_ext
2023-10-22T15:30:07,309   Building HMMER with NEON for CPU architecture: 'armv7l'
2023-10-22T15:30:21,503   performance hint: pyhmmer/exceptions.pxi:27:5: Exception check on 'py_handler' will always require the GIL to be acquired.
2023-10-22T15:30:21,504   Possible solutions:
2023-10-22T15:30:21,504   	1. Declare the function as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2023-10-22T15:30:21,504   	2. Use an 'int' return type on the function to allow an error code to be returned.
2023-10-22T15:30:25,614   performance hint: pyhmmer/easel.pyx:605:31: Exception check will always require the GIL to be acquired.
2023-10-22T15:30:25,614   Possible solutions:
2023-10-22T15:30:25,614   	1. Declare the function as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2023-10-22T15:30:25,614   	2. Use an 'int' return type on the function to allow an error code to be returned.
2023-10-22T15:30:26,968   performance hint: pyhmmer/easel.pyx:5125:35: Exception check will always require the GIL to be acquired.
2023-10-22T15:30:26,968   Possible solutions:
2023-10-22T15:30:26,969   	1. Declare the function as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2023-10-22T15:30:26,969   	2. Use an 'int' return type on the function to allow an error code to be returned.
2023-10-22T15:30:27,139   performance hint: pyhmmer/easel.pyx:5752:39: Exception check will always require the GIL to be acquired.
2023-10-22T15:30:27,139   Possible solutions:
2023-10-22T15:30:27,139   	1. Declare the function as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2023-10-22T15:30:27,139   	2. Use an 'int' return type on the function to allow an error code to be returned.
2023-10-22T15:30:33,538   performance hint: pyhmmer/exceptions.pxi:27:5: Exception check on 'py_handler' will always require the GIL to be acquired.
2023-10-22T15:30:33,538   Possible solutions:
2023-10-22T15:30:33,538   	1. Declare the function as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2023-10-22T15:30:33,538   	2. Use an 'int' return type on the function to allow an error code to be returned.
2023-10-22T15:30:39,323   performance hint: pyhmmer/plan7.pyx:2262:28: Exception check will always require the GIL to be acquired.
2023-10-22T15:30:39,323   Possible solutions:
2023-10-22T15:30:39,323   	1. Declare the function as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2023-10-22T15:30:39,323   	2. Use an 'int' return type on the function to allow an error code to be returned.
2023-10-22T15:30:40,569   performance hint: pyhmmer/plan7.pyx:6076:52: Exception check will always require the GIL to be acquired. Declare the function as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2023-10-22T15:30:40,842   performance hint: pyhmmer/plan7.pyx:7184:54: Exception check will always require the GIL to be acquired. Declare the function as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2023-10-22T15:30:40,847   performance hint: pyhmmer/plan7.pyx:7209:58: Exception check will always require the GIL to be acquired. Declare the function as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2023-10-22T15:30:40,848   performance hint: pyhmmer/plan7.pyx:7214:62: Exception check will always require the GIL to be acquired. Declare the function as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions.
2023-10-22T15:30:41,783   Compiling pyhmmer/errors.pyx because it changed.
2023-10-22T15:30:41,783   Compiling pyhmmer/easel.pyx because it changed.
2023-10-22T15:30:41,783   Compiling pyhmmer/plan7.pyx because it changed.
2023-10-22T15:30:41,784   Compiling pyhmmer/daemon.pyx because it changed.
2023-10-22T15:30:41,784   [1/4] Cythonizing pyhmmer/daemon.pyx
2023-10-22T15:30:41,784   [2/4] Cythonizing pyhmmer/easel.pyx
2023-10-22T15:30:41,784   [3/4] Cythonizing pyhmmer/errors.pyx
2023-10-22T15:30:41,784   [4/4] Cythonizing pyhmmer/plan7.pyx
2023-10-22T15:30:41,784   checking whether `PyInterpreterState_GetID` is available
2023-10-22T15:30:41,786   creating tmp
2023-10-22T15:30:41,786   creating tmp/pip-wheel-d82tfrzg
2023-10-22T15:30:41,787   creating tmp/pip-wheel-d82tfrzg/pyhmmer_fbc32e4d68984d8abeda4e36e31a8b14
2023-10-22T15:30:41,788   creating tmp/pip-wheel-d82tfrzg/pyhmmer_fbc32e4d68984d8abeda4e36e31a8b14/build
2023-10-22T15:30:41,789   creating tmp/pip-wheel-d82tfrzg/pyhmmer_fbc32e4d68984d8abeda4e36e31a8b14/build/temp.linux-armv7l-cpython-39
2023-10-22T15:30:41,790   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -c /tmp/pip-wheel-d82tfrzg/pyhmmer_fbc32e4d68984d8abeda4e36e31a8b14/build/temp.linux-armv7l-cpython-39/have_getidgynrng3r.c -o tmp/pip-wheel-d82tfrzg/pyhmmer_fbc32e4d68984d8abeda4e36e31a8b14/build/temp.linux-armv7l-cpython-39/have_getidgynrng3r.o -Werror=implicit-function-declaration
2023-10-22T15:30:42,107   yes
2023-10-22T15:30:42,108   building pyhmmer.errors for linux-armv7l with unix compiler
2023-10-22T15:30:42,122   building 'pyhmmer.errors' extension
2023-10-22T15:30:42,123   creating build/temp.linux-armv7l-cpython-39/pyhmmer
2023-10-22T15:30:42,124   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DHAS_PYINTERPRETERSTATE_GETID=1 -DeslENABLE_NEON=1 -DCYTHON_WITHOUT_ASSERTIONS=1 -Ibuild/temp.linux-armv7l-cpython-39 -Ivendor/easel -I/usr/include/python3.9 -c pyhmmer/errors.c -o build/temp.linux-armv7l-cpython-39/pyhmmer/errors.o -mfpu=neon -Wno-unused-variable
2023-10-22T15:30:58,089   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/pyhmmer/errors.o build/temp.linux-armv7l-cpython-39/libeasel.a -Lbuild/temp.linux-armv7l-cpython-39 -L/usr/lib -Lbuild/temp.linux-armv7l-cpython-39 -leasel -ldivsufsort -leasel -lhmmer -o build/lib.linux-armv7l-cpython-39/pyhmmer/errors.cpython-39-arm-linux-gnueabihf.so -mfpu=neon
2023-10-22T15:30:58,269   building pyhmmer.easel for linux-armv7l with unix compiler
2023-10-22T15:30:58,273   building 'pyhmmer.easel' extension
2023-10-22T15:30:58,273   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DHAS_PYINTERPRETERSTATE_GETID=1 -DeslENABLE_NEON=1 -DCYTHON_WITHOUT_ASSERTIONS=1 -Ibuild/temp.linux-armv7l-cpython-39 -Ivendor/easel -I/usr/include/python3.9 -c pyhmmer/easel.c -o build/temp.linux-armv7l-cpython-39/pyhmmer/easel.o -mfpu=neon -Wno-unused-variable
2023-10-22T15:30:58,658   In file included from pyhmmer/easel.c:1236:
2023-10-22T15:30:58,658   pyhmmer/fileobj/linux.h: In function ‘fileobj_linux_read’:
2023-10-22T15:30:58,658   pyhmmer/fileobj/linux.h:48:13: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:30:58,658      48 |     if (len > size) {
2023-10-22T15:30:58,659         |             ^
2023-10-22T15:35:00,739   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/pyhmmer/easel.o build/temp.linux-armv7l-cpython-39/libeasel.a -Lbuild/temp.linux-armv7l-cpython-39 -L/usr/lib -Lbuild/temp.linux-armv7l-cpython-39 -leasel -ldivsufsort -leasel -lhmmer -o build/lib.linux-armv7l-cpython-39/pyhmmer/easel.cpython-39-arm-linux-gnueabihf.so -mfpu=neon
2023-10-22T15:35:01,511   building pyhmmer.plan7 for linux-armv7l with unix compiler
2023-10-22T15:35:01,514   building 'pyhmmer.plan7' extension
2023-10-22T15:35:01,515   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DHAS_PYINTERPRETERSTATE_GETID=1 -DeslENABLE_NEON=1 -DCYTHON_WITHOUT_ASSERTIONS=1 -Ibuild/temp.linux-armv7l-cpython-39 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ivendor/easel -I/usr/include/python3.9 -c pyhmmer/plan7.c -o build/temp.linux-armv7l-cpython-39/pyhmmer/plan7.o -mfpu=neon -Wno-unused-variable
2023-10-22T15:35:02,232   In file included from pyhmmer/plan7.c:1235:
2023-10-22T15:35:02,233   pyhmmer/fileobj/linux.h: In function ‘fileobj_linux_read’:
2023-10-22T15:35:02,233   pyhmmer/fileobj/linux.h:48:13: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:35:02,233      48 |     if (len > size) {
2023-10-22T15:35:02,233         |             ^
2023-10-22T15:35:04,672   pyhmmer/plan7.c: In function ‘__pyx_f_7pyhmmer_5plan7_21OptimizedProfileBlock__allocate’:
2023-10-22T15:35:04,703   pyhmmer/plan7.c:61465:66: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:35:04,704   61465 |     for (__pyx_t_10 = __pyx_v_self->_block->listSize; __pyx_t_10 < __pyx_t_9; __pyx_t_10+=1) {
2023-10-22T15:35:04,704         |                                                                  ^
2023-10-22T15:35:05,276   pyhmmer/plan7.c: In function ‘__pyx_fuse_1__pyx_f_7pyhmmer_5plan7_8Pipeline_search_hmm’:
2023-10-22T15:35:05,312   pyhmmer/plan7.c:70883:27: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-10-22T15:35:05,312   70883 |   __pyx_t_6 = (__pyx_t_10 > __pyx_v_7pyhmmer_5plan7_HMMER_TARGET_LIMIT);
2023-10-22T15:35:05,313         |                           ^
2023-10-22T15:40:21,629   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/pyhmmer/plan7.o build/temp.linux-armv7l-cpython-39/libhmmer.a build/temp.linux-armv7l-cpython-39/libeasel.a build/temp.linux-armv7l-cpython-39/libdivsufsort.a -Lbuild/temp.linux-armv7l-cpython-39 -L/usr/lib -Lbuild/temp.linux-armv7l-cpython-39 -lhmmer -leasel -ldivsufsort -ldivsufsort -leasel -lhmmer -o build/lib.linux-armv7l-cpython-39/pyhmmer/plan7.cpython-39-arm-linux-gnueabihf.so -mfpu=neon
2023-10-22T15:40:22,840   building pyhmmer.daemon for linux-armv7l with unix compiler
2023-10-22T15:40:22,844   building 'pyhmmer.daemon' extension
2023-10-22T15:40:22,844   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DHAS_PYINTERPRETERSTATE_GETID=1 -DeslENABLE_NEON=1 -DCYTHON_WITHOUT_ASSERTIONS=1 -Ibuild/temp.linux-armv7l-cpython-39 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ivendor/easel -I/usr/include/python3.9 -c pyhmmer/daemon.c -o build/temp.linux-armv7l-cpython-39/pyhmmer/daemon.o -mfpu=neon -Wno-unused-variable
2023-10-22T15:41:01,709   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/pyhmmer/daemon.o build/temp.linux-armv7l-cpython-39/libhmmer.a build/temp.linux-armv7l-cpython-39/libeasel.a build/temp.linux-armv7l-cpython-39/libdivsufsort.a -Lbuild/temp.linux-armv7l-cpython-39 -L/usr/lib -Lbuild/temp.linux-armv7l-cpython-39 -lhmmer -leasel -ldivsufsort -ldivsufsort -leasel -lhmmer -o build/lib.linux-armv7l-cpython-39/pyhmmer/daemon.cpython-39-arm-linux-gnueabihf.so -mfpu=neon
2023-10-22T15:41:02,056   installing to build/bdist.linux-armv7l/wheel
2023-10-22T15:41:02,057   running install
2023-10-22T15:41:02,083   running install_lib
2023-10-22T15:41:02,091   creating build/bdist.linux-armv7l
2023-10-22T15:41:02,091   creating build/bdist.linux-armv7l/wheel
2023-10-22T15:41:02,093   creating build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:41:02,094   copying build/lib.linux-armv7l-cpython-39/pyhmmer/utils.py -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:41:02,096   copying build/lib.linux-armv7l-cpython-39/pyhmmer/easel.pyx -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:41:02,101   copying build/lib.linux-armv7l-cpython-39/pyhmmer/_getid.pxi -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:41:02,103   copying build/lib.linux-armv7l-cpython-39/pyhmmer/daemon.pxd -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:41:02,105   copying build/lib.linux-armv7l-cpython-39/pyhmmer/py.typed -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:41:02,106   copying build/lib.linux-armv7l-cpython-39/pyhmmer/plan7.pyi -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:41:02,109   copying build/lib.linux-armv7l-cpython-39/pyhmmer/daemon.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:41:02,155   copying build/lib.linux-armv7l-cpython-39/pyhmmer/plan7.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:41:02,407   copying build/lib.linux-armv7l-cpython-39/pyhmmer/easel.pxd -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:41:02,409   copying build/lib.linux-armv7l-cpython-39/pyhmmer/errors.pyi -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:41:02,411   copying build/lib.linux-armv7l-cpython-39/pyhmmer/errors.pyx -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:41:02,413   copying build/lib.linux-armv7l-cpython-39/pyhmmer/__init__.py -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:41:02,415   copying build/lib.linux-armv7l-cpython-39/pyhmmer/plan7.pyx -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:41:02,423   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests
2023-10-22T15:41:02,423   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/utils.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests
2023-10-22T15:41:02,426   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-10-22T15:41:02,426   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_easel/test_sequence.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-10-22T15:41:02,429   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_easel/test_bitfield.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-10-22T15:41:02,431   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_easel/test_alphabet.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-10-22T15:41:02,432   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_easel/test_ssi.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-10-22T15:41:02,434   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_easel/test_randomness.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-10-22T15:41:02,436   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_easel/test_keyhash.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-10-22T15:41:02,438   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_easel/__init__.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-10-22T15:41:02,439   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_easel/test_vector.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-10-22T15:41:02,441   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_easel/test_gencode.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-10-22T15:41:02,443   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_easel/test_msa.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-10-22T15:41:02,445   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_easel/test_block.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-10-22T15:41:02,448   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_easel/test_matrix.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-10-22T15:41:02,450   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_easel/test_sequencefile.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-10-22T15:41:02,453   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_easel/test_msafile.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-10-22T15:41:02,456   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-10-22T15:41:02,457   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_plan7/test_background.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-10-22T15:41:02,459   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_plan7/test_pipeline.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-10-22T15:41:02,462   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_plan7/test_tophits.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-10-22T15:41:02,465   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_plan7/test_hmmfile.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-10-22T15:41:02,468   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_plan7/test_hit.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-10-22T15:41:02,470   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_plan7/test_tracealigner.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-10-22T15:41:02,472   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_plan7/test_optimizedprofile.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-10-22T15:41:02,474   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_plan7/__init__.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-10-22T15:41:02,476   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_plan7/test_profile.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-10-22T15:41:02,479   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_plan7/test_builder.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-10-22T15:41:02,481   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_plan7/test_traces.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-10-22T15:41:02,483   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_plan7/test_block.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-10-22T15:41:02,485   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_plan7/test_hmm.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-10-22T15:41:02,488   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/requirements.txt -> build/bdist.linux-armv7l/wheel/pyhmmer/tests
2023-10-22T15:41:02,490   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/__init__.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests
2023-10-22T15:41:02,493   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/data
2023-10-22T15:41:02,495   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms
2023-10-22T15:41:02,496   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt2
2023-10-22T15:41:02,497   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/txt2/PKSI-AT.hmm2 -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt2
2023-10-22T15:41:02,502   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/txt2/PF02826.hmm2 -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt2
2023-10-22T15:41:02,505   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/txt2/t2pks.hmm2 -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt2
2023-10-22T15:41:02,585   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/txt2/Thioesterase.hmm2 -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt2
2023-10-22T15:41:02,589   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:41:02,590   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db/PF02826.hmm.h3i -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:41:02,592   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3m -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:41:02,595   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db/PKSI-AT.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:41:02,600   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3i -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:41:02,601   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db/PF02826.hmm.h3m -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:41:02,604   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3f -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:41:02,607   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db/t2pks.hmm.h3f -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:41:02,624   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db/t2pks.hmm.h3m -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:41:02,663   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3f -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:41:02,667   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db/PF02826.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:41:02,671   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3i -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:41:02,672   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3p -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:41:02,676   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3m -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:41:02,680   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db/PF02826.hmm.h3p -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:41:02,683   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db/t2pks.hmm.h3p -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:41:02,734   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db/PF02826.hmm.h3f -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:41:02,736   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3p -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:41:02,740   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db/Thioesterase.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:41:02,744   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db/t2pks.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:41:02,832   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/db/t2pks.hmm.h3i -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-10-22T15:41:02,835   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/bin
2023-10-22T15:41:02,836   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/bin/PF02826.h3m -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/bin
2023-10-22T15:41:02,839   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/bin/t2pks.h3m -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/bin
2023-10-22T15:41:02,887   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/bin/Thioesterase.h3m -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/bin
2023-10-22T15:41:02,890   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/bin/PKSI-AT.h3m -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/bin
2023-10-22T15:41:02,893   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/make.sh -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms
2023-10-22T15:41:02,896   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt
2023-10-22T15:41:02,897   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/txt/PKSI-AT.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt
2023-10-22T15:41:02,901   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/txt/LuxC.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt
2023-10-22T15:41:02,907   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/txt/bmyD.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt
2023-10-22T15:41:02,913   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/txt/laccase.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt
2023-10-22T15:41:02,920   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/txt/PF02826.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt
2023-10-22T15:41:02,924   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/txt/Thioesterase.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt
2023-10-22T15:41:02,928   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/hmms/txt/t2pks.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt
2023-10-22T15:41:03,032   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/seqs
2023-10-22T15:41:03,034   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/seqs/bmyD.fna -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/seqs
2023-10-22T15:41:03,036   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/seqs/CP040672.1.genes_100.fna -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/seqs
2023-10-22T15:41:03,042   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/seqs/BGC0001090.gbk -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/seqs
2023-10-22T15:41:03,050   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/seqs/CP000560.2.fna -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/seqs
2023-10-22T15:41:03,141   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/seqs/938293.PRJEB85.HG003687.faa -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/seqs
2023-10-22T15:41:03,159   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/seqs/PKSI.faa -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/seqs
2023-10-22T15:41:03,162   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/seqs/LuxC.faa -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/seqs
2023-10-22T15:41:03,165   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/msa
2023-10-22T15:41:03,167   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/msa/LuxC.hmmalign.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/msa
2023-10-22T15:41:03,169   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/msa/LuxC.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/msa
2023-10-22T15:41:03,172   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/msa/LuxC.faa -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/msa
2023-10-22T15:41:03,174   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/msa/laccase.clw -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/msa
2023-10-22T15:41:03,177   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/README.md -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data
2023-10-22T15:41:03,179   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/tables
2023-10-22T15:41:03,180   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/tables/PF02826.domtbl -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/tables
2023-10-22T15:41:03,183   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/tables/t2pks.scan.tbl -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/tables
2023-10-22T15:41:03,185   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/tables/t2pks.tbl -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/tables
2023-10-22T15:41:03,187   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/tables/bmyD2.tbl -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/tables
2023-10-22T15:41:03,189   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/tables/bmyD1.tbl -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/tables
2023-10-22T15:41:03,191   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/tables/bmyD3.tbl -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/tables
2023-10-22T15:41:03,193   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/tables/t2pks.domtbl -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/tables
2023-10-22T15:41:03,196   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/tables/PF02826.tbl -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/tables
2023-10-22T15:41:03,198   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/tables/A0A089QRB9.domtbl -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/tables
2023-10-22T15:41:03,201   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-10-22T15:41:03,202   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/jackhmmer/p12748-3.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-10-22T15:41:03,205   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/jackhmmer/KR-3.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-10-22T15:41:03,208   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/jackhmmer/KR-5.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-10-22T15:41:03,211   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/jackhmmer/KR-4.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-10-22T15:41:03,214   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/jackhmmer/KR-2.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-10-22T15:41:03,217   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/jackhmmer/KR-6.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-10-22T15:41:03,220   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/jackhmmer/p12748-2.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-10-22T15:41:03,222   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/jackhmmer/p12748-1.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-10-22T15:41:03,224   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/jackhmmer/KR-1.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-10-22T15:41:03,227   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/data/jackhmmer/KR-1_bkup.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-10-22T15:41:03,229   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_errors.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests
2023-10-22T15:41:03,231   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_doctest.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests
2023-10-22T15:41:03,234   copying build/lib.linux-armv7l-cpython-39/pyhmmer/tests/test_hmmer.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests
2023-10-22T15:41:03,237   copying build/lib.linux-armv7l-cpython-39/pyhmmer/plan7.pxd -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:41:03,240   copying build/lib.linux-armv7l-cpython-39/pyhmmer/exceptions.pxi -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:41:03,243   creating build/bdist.linux-armv7l/wheel/pyhmmer/fileobj
2023-10-22T15:41:03,245   copying build/lib.linux-armv7l-cpython-39/pyhmmer/fileobj/util.h -> build/bdist.linux-armv7l/wheel/pyhmmer/fileobj
2023-10-22T15:41:03,247   copying build/lib.linux-armv7l-cpython-39/pyhmmer/fileobj/linux.pxd -> build/bdist.linux-armv7l/wheel/pyhmmer/fileobj
2023-10-22T15:41:03,250   copying build/lib.linux-armv7l-cpython-39/pyhmmer/fileobj/linux.h -> build/bdist.linux-armv7l/wheel/pyhmmer/fileobj
2023-10-22T15:41:03,252   copying build/lib.linux-armv7l-cpython-39/pyhmmer/fileobj/bsd.h -> build/bdist.linux-armv7l/wheel/pyhmmer/fileobj
2023-10-22T15:41:03,255   copying build/lib.linux-armv7l-cpython-39/pyhmmer/fileobj/__init__.pxd -> build/bdist.linux-armv7l/wheel/pyhmmer/fileobj
2023-10-22T15:41:03,257   copying build/lib.linux-armv7l-cpython-39/pyhmmer/fileobj/bsd.pxd -> build/bdist.linux-armv7l/wheel/pyhmmer/fileobj
2023-10-22T15:41:03,260   creating build/bdist.linux-armv7l/wheel/pyhmmer/reexports
2023-10-22T15:41:03,261   copying build/lib.linux-armv7l-cpython-39/pyhmmer/reexports/p7_hmmfile.h -> build/bdist.linux-armv7l/wheel/pyhmmer/reexports
2023-10-22T15:41:03,263   copying build/lib.linux-armv7l-cpython-39/pyhmmer/reexports/p7_tophits.pxd -> build/bdist.linux-armv7l/wheel/pyhmmer/reexports
2023-10-22T15:41:03,265   copying build/lib.linux-armv7l-cpython-39/pyhmmer/reexports/esl_sqio_ascii.h -> build/bdist.linux-armv7l/wheel/pyhmmer/reexports
2023-10-22T15:41:03,267   copying build/lib.linux-armv7l-cpython-39/pyhmmer/reexports/p7_hmmfile.pxd -> build/bdist.linux-armv7l/wheel/pyhmmer/reexports
2023-10-22T15:41:03,270   copying build/lib.linux-armv7l-cpython-39/pyhmmer/reexports/p7_tophits.h -> build/bdist.linux-armv7l/wheel/pyhmmer/reexports
2023-10-22T15:41:03,272   copying build/lib.linux-armv7l-cpython-39/pyhmmer/reexports/__init__.pxd -> build/bdist.linux-armv7l/wheel/pyhmmer/reexports
2023-10-22T15:41:03,274   copying build/lib.linux-armv7l-cpython-39/pyhmmer/reexports/esl_sqio_ascii.pxd -> build/bdist.linux-armv7l/wheel/pyhmmer/reexports
2023-10-22T15:41:03,277   copying build/lib.linux-armv7l-cpython-39/pyhmmer/easel.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:41:03,405   copying build/lib.linux-armv7l-cpython-39/pyhmmer/easel.pyi -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:41:03,409   copying build/lib.linux-armv7l-cpython-39/pyhmmer/daemon.pyx -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:41:03,412   copying build/lib.linux-armv7l-cpython-39/pyhmmer/hmmer.py -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:41:03,416   copying build/lib.linux-armv7l-cpython-39/pyhmmer/errors.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:41:03,429   copying build/lib.linux-armv7l-cpython-39/pyhmmer/daemon.pyi -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-10-22T15:41:03,431   running install_egg_info
2023-10-22T15:41:03,444   Copying pyhmmer.egg-info to build/bdist.linux-armv7l/wheel/pyhmmer-0.10.3-py3.9.egg-info
2023-10-22T15:41:03,460   running install_scripts
2023-10-22T15:41:03,513   creating build/bdist.linux-armv7l/wheel/pyhmmer-0.10.3.dist-info/WHEEL
2023-10-22T15:41:03,516   creating '/tmp/pip-wheel-7qos5xff/.tmp-no1izsj0/pyhmmer-0.10.3-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-10-22T15:41:03,519   adding 'pyhmmer/__init__.py'
2023-10-22T15:41:03,520   adding 'pyhmmer/_getid.pxi'
2023-10-22T15:41:04,033   adding 'pyhmmer/daemon.cpython-39-arm-linux-gnueabihf.so'
2023-10-22T15:41:04,050   adding 'pyhmmer/daemon.pxd'
2023-10-22T15:41:04,052   adding 'pyhmmer/daemon.pyi'
2023-10-22T15:41:04,055   adding 'pyhmmer/daemon.pyx'
2023-10-22T15:41:05,670   adding 'pyhmmer/easel.cpython-39-arm-linux-gnueabihf.so'
2023-10-22T15:41:05,727   adding 'pyhmmer/easel.pxd'
2023-10-22T15:41:05,730   adding 'pyhmmer/easel.pyi'
2023-10-22T15:41:05,752   adding 'pyhmmer/easel.pyx'
2023-10-22T15:41:05,892   adding 'pyhmmer/errors.cpython-39-arm-linux-gnueabihf.so'
2023-10-22T15:41:05,898   adding 'pyhmmer/errors.pyi'
2023-10-22T15:41:05,900   adding 'pyhmmer/errors.pyx'
2023-10-22T15:41:05,901   adding 'pyhmmer/exceptions.pxi'
2023-10-22T15:41:05,908   adding 'pyhmmer/hmmer.py'
2023-10-22T15:41:08,670   adding 'pyhmmer/plan7.cpython-39-arm-linux-gnueabihf.so'
2023-10-22T15:41:08,769   adding 'pyhmmer/plan7.pxd'
2023-10-22T15:41:08,773   adding 'pyhmmer/plan7.pyi'
2023-10-22T15:41:08,804   adding 'pyhmmer/plan7.pyx'
2023-10-22T15:41:08,807   adding 'pyhmmer/py.typed'
2023-10-22T15:41:08,808   adding 'pyhmmer/utils.py'
2023-10-22T15:41:08,810   adding 'pyhmmer/fileobj/__init__.pxd'
2023-10-22T15:41:08,812   adding 'pyhmmer/fileobj/bsd.h'
2023-10-22T15:41:08,813   adding 'pyhmmer/fileobj/bsd.pxd'
2023-10-22T15:41:08,814   adding 'pyhmmer/fileobj/linux.h'
2023-10-22T15:41:08,815   adding 'pyhmmer/fileobj/linux.pxd'
2023-10-22T15:41:08,817   adding 'pyhmmer/fileobj/util.h'
2023-10-22T15:41:08,818   adding 'pyhmmer/reexports/__init__.pxd'
2023-10-22T15:41:08,820   adding 'pyhmmer/reexports/esl_sqio_ascii.h'
2023-10-22T15:41:08,821   adding 'pyhmmer/reexports/esl_sqio_ascii.pxd'
2023-10-22T15:41:08,822   adding 'pyhmmer/reexports/p7_hmmfile.h'
2023-10-22T15:41:08,823   adding 'pyhmmer/reexports/p7_hmmfile.pxd'
2023-10-22T15:41:08,824   adding 'pyhmmer/reexports/p7_tophits.h'
2023-10-22T15:41:08,826   adding 'pyhmmer/reexports/p7_tophits.pxd'
2023-10-22T15:41:08,827   adding 'pyhmmer/tests/__init__.py'
2023-10-22T15:41:08,828   adding 'pyhmmer/tests/requirements.txt'
2023-10-22T15:41:08,830   adding 'pyhmmer/tests/test_doctest.py'
2023-10-22T15:41:08,831   adding 'pyhmmer/tests/test_errors.py'
2023-10-22T15:41:08,834   adding 'pyhmmer/tests/test_hmmer.py'
2023-10-22T15:41:08,836   adding 'pyhmmer/tests/utils.py'
2023-10-22T15:41:08,837   adding 'pyhmmer/tests/data/README.md'
2023-10-22T15:41:08,839   adding 'pyhmmer/tests/data/hmms/make.sh'
2023-10-22T15:41:08,843   adding 'pyhmmer/tests/data/hmms/bin/PF02826.h3m'
2023-10-22T15:41:08,847   adding 'pyhmmer/tests/data/hmms/bin/PKSI-AT.h3m'
2023-10-22T15:41:08,852   adding 'pyhmmer/tests/data/hmms/bin/Thioesterase.h3m'
2023-10-22T15:41:09,017   adding 'pyhmmer/tests/data/hmms/bin/t2pks.h3m'
2023-10-22T15:41:09,047   adding 'pyhmmer/tests/data/hmms/db/PF02826.hmm'
2023-10-22T15:41:09,050   adding 'pyhmmer/tests/data/hmms/db/PF02826.hmm.h3f'
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2023-10-22T15:41:09,059   adding 'pyhmmer/tests/data/hmms/db/PF02826.hmm.h3p'
2023-10-22T15:41:09,085   adding 'pyhmmer/tests/data/hmms/db/PKSI-AT.hmm'
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2023-10-22T15:41:09,124   adding 'pyhmmer/tests/data/hmms/db/Thioesterase.hmm'
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2023-10-22T15:41:10,037   adding 'pyhmmer/tests/data/hmms/db/t2pks.hmm'
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2023-10-22T15:41:10,746   adding 'pyhmmer/tests/data/hmms/txt/LuxC.hmm'
2023-10-22T15:41:10,761   adding 'pyhmmer/tests/data/hmms/txt/PF02826.hmm'
2023-10-22T15:41:10,787   adding 'pyhmmer/tests/data/hmms/txt/PKSI-AT.hmm'
2023-10-22T15:41:10,809   adding 'pyhmmer/tests/data/hmms/txt/Thioesterase.hmm'
2023-10-22T15:41:10,819   adding 'pyhmmer/tests/data/hmms/txt/bmyD.hmm'
2023-10-22T15:41:10,857   adding 'pyhmmer/tests/data/hmms/txt/laccase.hmm'
2023-10-22T15:41:11,756   adding 'pyhmmer/tests/data/hmms/txt/t2pks.hmm'
2023-10-22T15:41:11,803   adding 'pyhmmer/tests/data/hmms/txt2/PF02826.hmm2'
2023-10-22T15:41:11,818   adding 'pyhmmer/tests/data/hmms/txt2/PKSI-AT.hmm2'
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2023-10-22T15:41:12,423   adding 'pyhmmer/tests/data/hmms/txt2/t2pks.hmm2'
2023-10-22T15:41:12,454   adding 'pyhmmer/tests/data/jackhmmer/KR-1.sto'
2023-10-22T15:41:12,456   adding 'pyhmmer/tests/data/jackhmmer/KR-1_bkup.sto'
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2023-10-22T15:41:12,474   adding 'pyhmmer/tests/data/msa/LuxC.faa'
2023-10-22T15:41:12,476   adding 'pyhmmer/tests/data/msa/LuxC.hmmalign.sto'
2023-10-22T15:41:12,478   adding 'pyhmmer/tests/data/msa/LuxC.sto'
2023-10-22T15:41:12,479   adding 'pyhmmer/tests/data/msa/laccase.clw'
2023-10-22T15:41:12,608   adding 'pyhmmer/tests/data/seqs/938293.PRJEB85.HG003687.faa'
2023-10-22T15:41:12,653   adding 'pyhmmer/tests/data/seqs/BGC0001090.gbk'
2023-10-22T15:41:14,926   adding 'pyhmmer/tests/data/seqs/CP000560.2.fna'
2023-10-22T15:41:15,001   adding 'pyhmmer/tests/data/seqs/CP040672.1.genes_100.fna'
2023-10-22T15:41:15,004   adding 'pyhmmer/tests/data/seqs/LuxC.faa'
2023-10-22T15:41:15,007   adding 'pyhmmer/tests/data/seqs/PKSI.faa'
2023-10-22T15:41:15,008   adding 'pyhmmer/tests/data/seqs/bmyD.fna'
2023-10-22T15:41:15,011   adding 'pyhmmer/tests/data/tables/A0A089QRB9.domtbl'
2023-10-22T15:41:15,013   adding 'pyhmmer/tests/data/tables/PF02826.domtbl'
2023-10-22T15:41:15,015   adding 'pyhmmer/tests/data/tables/PF02826.tbl'
2023-10-22T15:41:15,016   adding 'pyhmmer/tests/data/tables/bmyD1.tbl'
2023-10-22T15:41:15,018   adding 'pyhmmer/tests/data/tables/bmyD2.tbl'
2023-10-22T15:41:15,019   adding 'pyhmmer/tests/data/tables/bmyD3.tbl'
2023-10-22T15:41:15,025   adding 'pyhmmer/tests/data/tables/t2pks.domtbl'
2023-10-22T15:41:15,027   adding 'pyhmmer/tests/data/tables/t2pks.scan.tbl'
2023-10-22T15:41:15,030   adding 'pyhmmer/tests/data/tables/t2pks.tbl'
2023-10-22T15:41:15,032   adding 'pyhmmer/tests/test_easel/__init__.py'
2023-10-22T15:41:15,034   adding 'pyhmmer/tests/test_easel/test_alphabet.py'
2023-10-22T15:41:15,035   adding 'pyhmmer/tests/test_easel/test_bitfield.py'
2023-10-22T15:41:15,037   adding 'pyhmmer/tests/test_easel/test_block.py'
2023-10-22T15:41:15,039   adding 'pyhmmer/tests/test_easel/test_gencode.py'
2023-10-22T15:41:15,040   adding 'pyhmmer/tests/test_easel/test_keyhash.py'
2023-10-22T15:41:15,042   adding 'pyhmmer/tests/test_easel/test_matrix.py'
2023-10-22T15:41:15,043   adding 'pyhmmer/tests/test_easel/test_msa.py'
2023-10-22T15:41:15,045   adding 'pyhmmer/tests/test_easel/test_msafile.py'
2023-10-22T15:41:15,046   adding 'pyhmmer/tests/test_easel/test_randomness.py'
2023-10-22T15:41:15,048   adding 'pyhmmer/tests/test_easel/test_sequence.py'
2023-10-22T15:41:15,050   adding 'pyhmmer/tests/test_easel/test_sequencefile.py'
2023-10-22T15:41:15,051   adding 'pyhmmer/tests/test_easel/test_ssi.py'
2023-10-22T15:41:15,053   adding 'pyhmmer/tests/test_easel/test_vector.py'
2023-10-22T15:41:15,055   adding 'pyhmmer/tests/test_plan7/__init__.py'
2023-10-22T15:41:15,056   adding 'pyhmmer/tests/test_plan7/test_background.py'
2023-10-22T15:41:15,058   adding 'pyhmmer/tests/test_plan7/test_block.py'
2023-10-22T15:41:15,059   adding 'pyhmmer/tests/test_plan7/test_builder.py'
2023-10-22T15:41:15,061   adding 'pyhmmer/tests/test_plan7/test_hit.py'
2023-10-22T15:41:15,062   adding 'pyhmmer/tests/test_plan7/test_hmm.py'
2023-10-22T15:41:15,064   adding 'pyhmmer/tests/test_plan7/test_hmmfile.py'
2023-10-22T15:41:15,065   adding 'pyhmmer/tests/test_plan7/test_optimizedprofile.py'
2023-10-22T15:41:15,067   adding 'pyhmmer/tests/test_plan7/test_pipeline.py'
2023-10-22T15:41:15,069   adding 'pyhmmer/tests/test_plan7/test_profile.py'
2023-10-22T15:41:15,071   adding 'pyhmmer/tests/test_plan7/test_tophits.py'
2023-10-22T15:41:15,072   adding 'pyhmmer/tests/test_plan7/test_tracealigner.py'
2023-10-22T15:41:15,073   adding 'pyhmmer/tests/test_plan7/test_traces.py'
2023-10-22T15:41:15,075   adding 'pyhmmer-0.10.3.dist-info/COPYING'
2023-10-22T15:41:15,077   adding 'pyhmmer-0.10.3.dist-info/METADATA'
2023-10-22T15:41:15,079   adding 'pyhmmer-0.10.3.dist-info/WHEEL'
2023-10-22T15:41:15,079   adding 'pyhmmer-0.10.3.dist-info/top_level.txt'
2023-10-22T15:41:15,082   adding 'pyhmmer-0.10.3.dist-info/RECORD'
2023-10-22T15:41:15,274   removing build/bdist.linux-armv7l/wheel
2023-10-22T15:41:16,841   Building wheel for pyhmmer (pyproject.toml): finished with status 'done'
2023-10-22T15:41:17,284   Created wheel for pyhmmer: filename=pyhmmer-0.10.3-cp39-cp39-linux_armv7l.whl size=18549553 sha256=391baeafcf93817de15028ed0536c4e9e600eae1c8c7c251e131705d84dd4f90
2023-10-22T15:41:17,285   Stored in directory: /tmp/pip-ephem-wheel-cache-1vfpkq37/wheels/ba/0c/53/a9a9458dcbe738e8f426a9d3a33c79eae79ced1c3c780db4f8
2023-10-22T15:41:17,309 Successfully built pyhmmer
2023-10-22T15:41:17,754 Removed build tracker: '/tmp/pip-build-tracker-m4n8uq9p'