2023-10-24T11:43:42,355 Created temporary directory: /tmp/pip-build-tracker-rjjyoarw
2023-10-24T11:43:42,356 Initialized build tracking at /tmp/pip-build-tracker-rjjyoarw
2023-10-24T11:43:42,356 Created build tracker: /tmp/pip-build-tracker-rjjyoarw
2023-10-24T11:43:42,357 Entered build tracker: /tmp/pip-build-tracker-rjjyoarw
2023-10-24T11:43:42,358 Created temporary directory: /tmp/pip-wheel-bw1usl56
2023-10-24T11:43:42,361 Created temporary directory: /tmp/pip-ephem-wheel-cache-_rkguzps
2023-10-24T11:43:42,383 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-10-24T11:43:42,387 2 location(s) to search for versions of moleculekit:
2023-10-24T11:43:42,387 * https://pypi.org/simple/moleculekit/
2023-10-24T11:43:42,387 * https://www.piwheels.org/simple/moleculekit/
2023-10-24T11:43:42,388 Fetching project page and analyzing links: https://pypi.org/simple/moleculekit/
2023-10-24T11:43:42,388 Getting page https://pypi.org/simple/moleculekit/
2023-10-24T11:43:42,390 Found index url https://pypi.org/simple/
2023-10-24T11:43:42,630 Fetched page https://pypi.org/simple/moleculekit/ as application/vnd.pypi.simple.v1+json
2023-10-24T11:43:42,667   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/91/e6/25b6853357dfef8a4026325e420d8213d34c17c078a2f13b60cbb6213ea3/moleculekit-0.1.4-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,668   Found link https://files.pythonhosted.org/packages/13/0f/a200e8e7632d3a521cfc7c15fa4d0270802efce40f98ac5a5cae58385b7e/moleculekit-0.1.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.4
2023-10-24T11:43:42,668   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/9f/a5/eac32fcb2e9ff0d30298aa4cec8e152c95d675c4dd1a1a5d7676986d4d75/moleculekit-0.1.5-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,669   Found link https://files.pythonhosted.org/packages/c5/6f/ae7d1b8513eb23ec0fa8e153c42fda0ee96f9e29c6e4808c5ff78c115e89/moleculekit-0.1.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.5
2023-10-24T11:43:42,669   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/e2/51/0f4e4b95d0d5c16664ede7f2cd31e6d6003e9c940a8fbe28c74de91de627/moleculekit-0.1.6-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,670   Found link https://files.pythonhosted.org/packages/08/fa/bc1b5918a1715901fd0ea1e796de9e6647276943983962616f2ddceb1c3b/moleculekit-0.1.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.6
2023-10-24T11:43:42,671   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/49/59/ddf780e7a574dde727d5db8b93c41bcc3d19436a8ae9f468bad5ea48529e/moleculekit-0.1.7-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,671   Found link https://files.pythonhosted.org/packages/c7/cb/d1b609de2d59d10a60ca74c9d1a044534f608e323dc16a87e5bd77ee0eb0/moleculekit-0.1.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.7
2023-10-24T11:43:42,672   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/5b/a4/59e6017c4e5b99be72d8e0eb6b6442061f338e309d91c25d607162298d11/moleculekit-0.1.8-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,673   Found link https://files.pythonhosted.org/packages/c0/1d/753c7461942457e39fb069504cdc381518a4ef18f486de0a42572236095e/moleculekit-0.1.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.8
2023-10-24T11:43:42,674   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/28/39/e4219020234475a17077f38ebcbdff236872d8e3a0455b376edb847f4141/moleculekit-0.1.9-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,674   Found link https://files.pythonhosted.org/packages/e0/c6/5d47b6257a3d1aca76d635d1dc8fffd6ed712fbe324bfeb2f2da47edda09/moleculekit-0.1.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.9
2023-10-24T11:43:42,675   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/3c/12/42a0a156c8a51b2ef9de7c720cbcd226c1b0a7d13dce7dcdd4c34480e05f/moleculekit-0.1.12-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,676   Found link https://files.pythonhosted.org/packages/12/9d/ef12aeb7165210a6d06f5a735640db6c49cda2597bebb3584e72f7a2aee5/moleculekit-0.1.12.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.12
2023-10-24T11:43:42,677   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/e0/de/ddea29e806547e8743801bd5b44f5f4b62e96a3b6aa1b59e7ae3c183e65d/moleculekit-0.1.14-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,677   Found link https://files.pythonhosted.org/packages/0f/b8/5dce8ade2a03ba18558275d58f1f586fc78b76442ca923e02e05b7aa4638/moleculekit-0.1.14.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.14
2023-10-24T11:43:42,678   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/98/67/c911fd0aab052ed8866739c282be96070bcafee75cad331165f356d0bf11/moleculekit-0.1.15-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,678   Found link https://files.pythonhosted.org/packages/be/5c/b803aa60ac93136e6fce9ab52ec50aec246481c5db76892780152f769d75/moleculekit-0.1.15.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.15
2023-10-24T11:43:42,679   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/4f/30/78d34f8541a5e0e7488b6d59c43b29cf4d9f42467553fb0cee41312409c7/moleculekit-0.1.16-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,679   Found link https://files.pythonhosted.org/packages/d3/39/0774efc740b7e6a6969e084e0eb126483049a60229de80cc09a1a4b78011/moleculekit-0.1.16.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.16
2023-10-24T11:43:42,680   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/ca/d8/f9dd491ee5984f59dbd1206bb41062543e1a1664bb002d4b2675ec3f882c/moleculekit-0.1.17-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,680   Found link https://files.pythonhosted.org/packages/f6/27/b820e1158e448f35830265eeb023ec7d7cc72272136a31ec5365a893174f/moleculekit-0.1.17.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.17
2023-10-24T11:43:42,681   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/0d/df/1d0dfd734e1d67c6ba1a1291b6f530c60eb3a65c25e2990d0fb62c73dbea/moleculekit-0.1.19-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,682   Found link https://files.pythonhosted.org/packages/6e/55/28d041ad7324e063e00ed2e0a5cd91d4c67e6cda3e62c24ab9c3ea2ad5dc/moleculekit-0.1.19.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.19
2023-10-24T11:43:42,683   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/f0/f3/18f3b015e5fdf04c0243d63132d4d29ab807b608bda9cab6de505c060196/moleculekit-0.1.21-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,683   Found link https://files.pythonhosted.org/packages/d7/2f/510d466d4e507523c6f8bb5323a03351e0a9e6422b29ab7a9d7b34101484/moleculekit-0.1.21.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.21
2023-10-24T11:43:42,684   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/2c/83/5bdc26bbc9c0dc6b7fa54260134f5545c6f8c01e50b4cc94de02d0a2f295/moleculekit-0.1.22-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,685   Found link https://files.pythonhosted.org/packages/28/80/3c053d293b0aad5df512b8c7bf1ef111c621ee80bbe08ea83763ca004a85/moleculekit-0.1.22.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.22
2023-10-24T11:43:42,685   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/5d/ec/9e6438a424607cba93fe71b89ef89dbff35369f133ed76ded895861ab290/moleculekit-0.1.23-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,686   Found link https://files.pythonhosted.org/packages/6d/c3/680633af7541d2c7ecf2fde4dc9661f107efaf55688d3f41d15407cb2248/moleculekit-0.1.23.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.23
2023-10-24T11:43:42,687   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/0b/02/f2bbd133b7e76a60bdc1d92d10621ce9f60f8eeaf97ed7dacae2e216cb2b/moleculekit-0.1.24-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,688   Found link https://files.pythonhosted.org/packages/7f/f7/48b8b09fbf6e368925a186ef4cb874ae0abfae6d5b81bd2656502290add5/moleculekit-0.1.24.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.24
2023-10-24T11:43:42,688   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/1e/bd/24146e575547d1fc8bd24b4b7d9a57cbe14c357ebf85d638df6421412465/moleculekit-0.1.26-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,689   Found link https://files.pythonhosted.org/packages/f5/6e/a9dafd4b3b109011d156a6f7c726925669e42435b6049859f3a0a050a87f/moleculekit-0.1.26.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.26
2023-10-24T11:43:42,689   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/fe/63/a0e65b18866805186e3a4ba2b8ece20b73b85ec1ce6b3f8597e0c2508178/moleculekit-0.1.27-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,690   Found link https://files.pythonhosted.org/packages/70/7e/a01a54d9e88eaf00ec47989f360fb98d58e871d500aa28c44b9c7b8bd7ff/moleculekit-0.1.27.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.27
2023-10-24T11:43:42,690   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/f1/db/8f0879b07acae5356393297640e1116c459d28b59d19e1bd328da94e4b7a/moleculekit-0.1.29-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,691   Found link https://files.pythonhosted.org/packages/dc/10/67c6720423554f257425330caf21342c13c59bc86aee634f369b481dad7b/moleculekit-0.1.29.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.29
2023-10-24T11:43:42,691   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/83/f1/2cb963c0a74d919761e8516fe969330c122c9874426ff8eef7834b9b0c62/moleculekit-0.1.30-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,692   Found link https://files.pythonhosted.org/packages/a9/87/cd070158b979d89c02edf2a1deb98ced11e6a442952ed67ebb4f281d6700/moleculekit-0.1.30.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.30
2023-10-24T11:43:42,693   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/cf/c4/f211cc80e281f1ee01040cfa490a65e874a54b5bedf2dfd73e3be6e72d93/moleculekit-0.1.31-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,694   Found link https://files.pythonhosted.org/packages/d7/8b/2b012f3371e5fceb875601e16c83a0ddfd5602d1cdceb953a4b36fc12200/moleculekit-0.1.31.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.31
2023-10-24T11:43:42,694   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/bf/2e/56178883cad4d2429d5cb5fb23d17be42663dea6da428df98f2b70be67a3/moleculekit-0.1.32-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,695   Found link https://files.pythonhosted.org/packages/97/34/992324fd9f1bb4d151b3383f601e3b69810e62c9d3530580ae8b43c4dcca/moleculekit-0.1.32.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.32
2023-10-24T11:43:42,696   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/7e/84/8e678afbcbd29c9b462973571bf3a043a7b5dbf7a98f1ac3dc82c3f5fc91/moleculekit-0.2.0-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,696   Found link https://files.pythonhosted.org/packages/10/f8/dfc9b84d16081239c0b6e3a2896e59db9f8b8617a67b7585e98789942324/moleculekit-0.2.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.0
2023-10-24T11:43:42,697   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/cb/a7/e706e1daa9d60d9ca9a96436564ec0612fe5fc850fdabad6e0c5174d52c5/moleculekit-0.2.1-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,698   Found link https://files.pythonhosted.org/packages/a8/ad/3c01c094324fcaf3a516aa3ab376ae4bec251dc2005f172217368e97b1db/moleculekit-0.2.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.1
2023-10-24T11:43:42,698   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/30/c3/e618404cdeb463f4f5f8fbfa1d5d45a81ea3c31cef86e9c6ca14a3d64589/moleculekit-0.2.2-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,699   Found link https://files.pythonhosted.org/packages/ce/2a/e4f0ea22c4e3be055409fbe8cda7802bd2cd1095926f62f2c78b7f447b46/moleculekit-0.2.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.2
2023-10-24T11:43:42,699   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/3c/c6/baf4c6dafa42a7f055cd29cad8a79b2e99baaf474e8ddcff833e02a8c9a2/moleculekit-0.2.3-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,700   Found link https://files.pythonhosted.org/packages/92/3b/d42fa900fbc359ad0b7806344c2eb303f06336fc6bad439db5550483ce5c/moleculekit-0.2.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.3
2023-10-24T11:43:42,700   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/d7/72/5674ef2a697583774eb66559f23b37026098badcc7e14bb09247c112baec/moleculekit-0.2.4-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,701   Found link https://files.pythonhosted.org/packages/7c/f3/5372063ddc10f57f1ea1aa29ab3f06d98d3d29c22d2a3d0c7c318ff7dc4a/moleculekit-0.2.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.4
2023-10-24T11:43:42,702   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/35/99/9bc21e28d9d4007623055b30fc43d18464649dfa39703ea80e9c32ba4607/moleculekit-0.2.5-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,702   Found link https://files.pythonhosted.org/packages/dd/7a/f6d8ac771d9e4c9117ab098a281231e6c4c3fadbbeafce69ac5b8370f2bd/moleculekit-0.2.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.5
2023-10-24T11:43:42,703   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/97/2d/1b5aeecf49f225f13c39534c7a93181f14bbb295f4b0bb50019d7efda717/moleculekit-0.2.6-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,704   Found link https://files.pythonhosted.org/packages/8a/04/f032c25621eac9ccab21dd25c0cb5d7150a21a5b0cde5ae21adb3e2be933/moleculekit-0.2.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.6
2023-10-24T11:43:42,705   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/7b/c3/6023b75cb8d60607d1932a6f3fa1fee5c99e88b692f25e3ed0072a4812a5/moleculekit-0.2.7-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,705   Found link https://files.pythonhosted.org/packages/a6/68/1eb4fb904763839ec4df4eab490702bd7245a6848ebfb693b165d5fbb153/moleculekit-0.2.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.7
2023-10-24T11:43:42,706   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/a3/85/452591c89b66659eaf24e216aef7818e3061a78bb1fc832f8616808949d4/moleculekit-0.2.8-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,707   Found link https://files.pythonhosted.org/packages/68/e0/0fe1302790061ea9e59370a988d67b877642c45a9e6d725819118cc3aae1/moleculekit-0.2.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.8
2023-10-24T11:43:42,707   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/90/90/238209bf8023d0779c0d4a9592786cc94e69d3dde60b5b17473d57c97b60/moleculekit-0.2.9-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-10-24T11:43:42,708   Found link https://files.pythonhosted.org/packages/bd/ad/aa7f2c7343506e17f61f2c4223dc912d4f099fdcc3e1736f393c9c31e118/moleculekit-0.2.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.9
2023-10-24T11:43:42,709   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/40/39/e7c3ea68289cf49ac58a53a55de11c71471a26c55268ce2a11dd3d0f4b1d/moleculekit-0.3.0-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
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2023-10-24T11:43:42,810   Found link https://files.pythonhosted.org/packages/3d/e9/5d17d4e81b5894b9ace33d43b373881813b8a68b0a1365d7590990c5c370/moleculekit-1.7.0.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.0
2023-10-24T11:43:42,811   Found link https://files.pythonhosted.org/packages/4e/3a/29fb1aa0e3792fef88348885348370f39af453fb75d5505a208068d1c4ac/moleculekit-1.7.1.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.1
2023-10-24T11:43:42,812   Found link https://files.pythonhosted.org/packages/4a/13/dd6711d592d27e604c48830300f5596aafa1bbc479dc5eb49ed9797085eb/moleculekit-1.7.2.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.2
2023-10-24T11:43:42,813   Found link https://files.pythonhosted.org/packages/c7/cb/205d8925276863e2892c2c1ae2747cd4834cd3f174521172670ce43b50b8/moleculekit-1.7.3.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.3
2023-10-24T11:43:42,814   Found link https://files.pythonhosted.org/packages/6f/9e/2bce5993679a3666fd12803b93bb9a4daa59922f0ecdd26e9726df5d7f73/moleculekit-1.7.4.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.4
2023-10-24T11:43:42,815   Found link https://files.pythonhosted.org/packages/fa/63/993d55964a5afc9417ca31ab06a7d08f10b8fb38c63157bef0f350b4bb49/moleculekit-1.7.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.6
2023-10-24T11:43:42,816   Found link https://files.pythonhosted.org/packages/9b/3d/351d6444550ae455f20139e1d71ab138449c75b4a9782ac831dc9c6daa76/moleculekit-1.7.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.7
2023-10-24T11:43:42,817   Found link https://files.pythonhosted.org/packages/1b/7a/80d740239c506d7eea7cdba7576c503012556338861c10d5d2908e1912f7/moleculekit-1.7.8.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.8
2023-10-24T11:43:42,818   Found link https://files.pythonhosted.org/packages/05/e0/64dd3801f9b9cd011f8093d85201df3b259bab3502b87b6e37edadea0f21/moleculekit-1.7.9.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.9
2023-10-24T11:43:42,819   Found link https://files.pythonhosted.org/packages/0e/fd/650680f6dcf164b179c8a334c56fc7ba97d71519330f03bdc485307b6a0d/moleculekit-1.7.10.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.10
2023-10-24T11:43:42,820   Found link https://files.pythonhosted.org/packages/37/05/3105db0d4a63b49d0f4534b5e9d6a488b96b83b3aac621224338f3a6aa6b/moleculekit-1.7.12.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.12
2023-10-24T11:43:42,821   Found link https://files.pythonhosted.org/packages/08/ec/48d8122fea93c59592ae22dc29f16496087cdf31064793e6da173fcf2e36/moleculekit-1.7.13.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.13
2023-10-24T11:43:42,822   Found link https://files.pythonhosted.org/packages/46/79/442f4846c44e99a4e5d61b09e65cb57ec69b24ae4bf7e8b704f125238c6c/moleculekit-1.7.14.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.14
2023-10-24T11:43:42,823   Found link https://files.pythonhosted.org/packages/fa/fd/aa5c1911df4cf3bee9575fbc1cdbd39bcb1d9164e77c772fa938be672cc0/moleculekit-1.7.15.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.15
2023-10-24T11:43:42,823   Found link https://files.pythonhosted.org/packages/38/fe/74b265e75deb09844035690d506614163cd262a2d6bc7c83b4e2f28d4bb9/moleculekit-1.7.16.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.16
2023-10-24T11:43:42,824   Found link https://files.pythonhosted.org/packages/8b/2f/56c308933a9652bc40c41a53d57509ef38cc3c21d55b6f5570c2d9a865ed/moleculekit-1.7.17.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.17
2023-10-24T11:43:42,825   Found link https://files.pythonhosted.org/packages/96/a3/11b655506ce842ebea0b6d4c86883a538095687cb7bc9c4a179420971bd7/moleculekit-1.8.1.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.1
2023-10-24T11:43:42,826   Found link https://files.pythonhosted.org/packages/9d/d3/ead35117c0f3b3b1be847d561ff31bf59dfde0c49982bff106a3cc3876f0/moleculekit-1.8.2.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.2
2023-10-24T11:43:42,828   Found link https://files.pythonhosted.org/packages/23/e8/3ebe2bfb667296b1c79d4e59fdfb487116bfd8bec579ca242eec7ecad0c2/moleculekit-1.8.3.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.3
2023-10-24T11:43:42,829   Found link https://files.pythonhosted.org/packages/6f/4d/4a0e90a65d79829ae0bec8d857de2f8b7e18b6d60e05daa99cdbed0061c0/moleculekit-1.8.4.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.4
2023-10-24T11:43:42,830   Found link https://files.pythonhosted.org/packages/15/bb/f88884d7710aeb6290c69f180df912ce73beb4975ceea9f58aa28250737c/moleculekit-1.8.5.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.5
2023-10-24T11:43:42,831 Fetching project page and analyzing links: https://www.piwheels.org/simple/moleculekit/
2023-10-24T11:43:42,832 Getting page https://www.piwheels.org/simple/moleculekit/
2023-10-24T11:43:42,834 Found index url https://www.piwheels.org/simple/
2023-10-24T11:43:43,033 Fetched page https://www.piwheels.org/simple/moleculekit/ as text/html
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2023-10-24T11:43:43,108   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.7.17-cp39-cp39-linux_armv7l.whl#sha256=885ac80555f3166751d89984b0b94dbb3c5fa2e22658ba0bf20b5582384dffb8 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
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2023-10-24T11:43:43,115   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.7.14-cp39-cp39-linux_armv7l.whl#sha256=97fc7c8c8c54ef694cf15c6e484b820059c32c27678ef5afb381dfd813acccf2 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
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2023-10-24T11:43:43,166   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.13-cp39-cp39-linux_armv7l.whl#sha256=413233b9ea619a276a0cc4911cee59417c2be694ab30c5c5c836a31391e5b6c4 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,166   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.13-cp39-cp39-linux_armv6l.whl#sha256=413233b9ea619a276a0cc4911cee59417c2be694ab30c5c5c836a31391e5b6c4 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,167   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.13-cp37-cp37m-linux_armv7l.whl#sha256=ef137737db23a1f54c74776c99ac718685db863975d888a3e219900b5874fe45 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,168   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.13-cp37-cp37m-linux_armv6l.whl#sha256=ef137737db23a1f54c74776c99ac718685db863975d888a3e219900b5874fe45 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,168   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.12-cp39-cp39-linux_armv7l.whl#sha256=d75d99aa397ece4f4d163fff8e78e6868ccbab4190016befc567c5f08d1cbbd4 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,168   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.12-cp39-cp39-linux_armv6l.whl#sha256=d75d99aa397ece4f4d163fff8e78e6868ccbab4190016befc567c5f08d1cbbd4 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,169   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.12-cp37-cp37m-linux_armv7l.whl#sha256=a871d3b206f986ddc16b14a1e59904384aea1d6936948be45d6d3d05211637c4 (from https://www.piwheels.org/simple/moleculekit/)
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2023-10-24T11:43:43,170   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp39-cp39-linux_armv7l.whl#sha256=0d0004615c5da8823417816aa8e72f2ac2a2993c01c9ffa07540521dd44cdeb9 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,170   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp39-cp39-linux_armv6l.whl#sha256=0d0004615c5da8823417816aa8e72f2ac2a2993c01c9ffa07540521dd44cdeb9 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,171   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp37-cp37m-linux_armv7l.whl#sha256=66dbff1fb6cecaa00851b6b78480b3d8eb3f5f5d9aae539ad9397ec3dc9b22d8 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,172   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp37-cp37m-linux_armv6l.whl#sha256=66dbff1fb6cecaa00851b6b78480b3d8eb3f5f5d9aae539ad9397ec3dc9b22d8 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,172   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp39-cp39-linux_armv7l.whl#sha256=72aada7099cf1c7fbed38107b64c08622659cb763f35e5f2b75052a08f5cb853 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,173   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp39-cp39-linux_armv6l.whl#sha256=72aada7099cf1c7fbed38107b64c08622659cb763f35e5f2b75052a08f5cb853 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,173   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp37-cp37m-linux_armv7l.whl#sha256=e8d8fc1d3f31a50afae4252a2c403fb5b928eff4452d3954322d0d9b2d5383c5 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,174   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp37-cp37m-linux_armv6l.whl#sha256=e8d8fc1d3f31a50afae4252a2c403fb5b928eff4452d3954322d0d9b2d5383c5 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,175   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp39-cp39-linux_armv7l.whl#sha256=b1bfb9de96ef11fdd768cccd1b894300c470a7389f83c8cca3f42ac636f3dcb7 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,176   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp39-cp39-linux_armv6l.whl#sha256=b1bfb9de96ef11fdd768cccd1b894300c470a7389f83c8cca3f42ac636f3dcb7 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,176   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp37-cp37m-linux_armv7l.whl#sha256=8e98ed7e4f43a05739fbb98f22bc0aeabe5d6a76673b8883a4fa88c3762ba080 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,176   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp37-cp37m-linux_armv6l.whl#sha256=8e98ed7e4f43a05739fbb98f22bc0aeabe5d6a76673b8883a4fa88c3762ba080 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,177   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp39-cp39-linux_armv7l.whl#sha256=de2e9946d86d3e6deb732605b7b9804d3ee229e0d1e869093c26731ff1cf6e49 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,177   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp39-cp39-linux_armv6l.whl#sha256=de2e9946d86d3e6deb732605b7b9804d3ee229e0d1e869093c26731ff1cf6e49 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,178   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp37-cp37m-linux_armv7l.whl#sha256=881a09b6497cca181f77a3388648b0ec90974f79d8c81513666ac38dbed69842 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,179   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp37-cp37m-linux_armv6l.whl#sha256=881a09b6497cca181f77a3388648b0ec90974f79d8c81513666ac38dbed69842 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,179   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp39-cp39-linux_armv7l.whl#sha256=f42eb6c315d3242355c8e36090f1f77ed92b768cefb595178e81eb89fa5a79d5 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,180   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp39-cp39-linux_armv6l.whl#sha256=f42eb6c315d3242355c8e36090f1f77ed92b768cefb595178e81eb89fa5a79d5 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,180   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp37-cp37m-linux_armv7l.whl#sha256=30013f87dd3dc0c9b99cc9862ac0d0be618fe63faa7c7c4623be9cdd86396624 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,181   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp37-cp37m-linux_armv6l.whl#sha256=30013f87dd3dc0c9b99cc9862ac0d0be618fe63faa7c7c4623be9cdd86396624 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,182   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp39-cp39-linux_armv7l.whl#sha256=e123a257574ee84a677c70d154c26fb75cdf29cfb3f9491b309d8ad47e37f3c0 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,183   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp39-cp39-linux_armv6l.whl#sha256=e123a257574ee84a677c70d154c26fb75cdf29cfb3f9491b309d8ad47e37f3c0 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,183   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp37-cp37m-linux_armv7l.whl#sha256=a30adf43b2972eb0763ce00b18dc4dffb61a74ac1da2391652cf53f73dba67ce (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,184   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp37-cp37m-linux_armv6l.whl#sha256=a30adf43b2972eb0763ce00b18dc4dffb61a74ac1da2391652cf53f73dba67ce (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,184   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp39-cp39-linux_armv7l.whl#sha256=c666ea91f79ecf6c6d99ca251e7f938e7e82208a01a91d39b827ba64eee4ce41 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,185   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp39-cp39-linux_armv6l.whl#sha256=c666ea91f79ecf6c6d99ca251e7f938e7e82208a01a91d39b827ba64eee4ce41 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,185   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp37-cp37m-linux_armv7l.whl#sha256=286faceca4683f35ce8e9aeefefdecee1c02150dfc9b7deb62015ce17f3f557c (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,186   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp37-cp37m-linux_armv6l.whl#sha256=286faceca4683f35ce8e9aeefefdecee1c02150dfc9b7deb62015ce17f3f557c (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,186   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp39-cp39-linux_armv7l.whl#sha256=390edc2399f77605c97d9fc8db3b63f282ba297c67fe9514db91ebec945fa2d7 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,187   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp39-cp39-linux_armv6l.whl#sha256=390edc2399f77605c97d9fc8db3b63f282ba297c67fe9514db91ebec945fa2d7 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,187   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp37-cp37m-linux_armv7l.whl#sha256=e7e709fde2552ca5cb602bf420ed89d740b1e75bd32c879ee33ffe3b747b109a (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,188   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp37-cp37m-linux_armv6l.whl#sha256=e7e709fde2552ca5cb602bf420ed89d740b1e75bd32c879ee33ffe3b747b109a (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,189   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp39-cp39-linux_armv7l.whl#sha256=aed227f0c49804421d71b6c949c0d24367a74207b8f855c59e4e73a89b5a93ed (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,189   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp39-cp39-linux_armv6l.whl#sha256=aed227f0c49804421d71b6c949c0d24367a74207b8f855c59e4e73a89b5a93ed (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,190   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp37-cp37m-linux_armv7l.whl#sha256=ad67f1f622d2a2a49358691e3e784e48277aa09cf1f984ed60e847892a3413d7 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,191   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp37-cp37m-linux_armv6l.whl#sha256=ad67f1f622d2a2a49358691e3e784e48277aa09cf1f984ed60e847892a3413d7 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,191   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp39-cp39-linux_armv7l.whl#sha256=7f76858d50e6bb4611f32f053be82003c583d01ad83aa44b6f220dce89a7856f (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,192   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp39-cp39-linux_armv6l.whl#sha256=7f76858d50e6bb4611f32f053be82003c583d01ad83aa44b6f220dce89a7856f (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,192   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp37-cp37m-linux_armv7l.whl#sha256=ab05d1bc06d0d249cbb4871d51e6dca4b9e8474288d86326bd7dd603b9b99820 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,193   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp37-cp37m-linux_armv6l.whl#sha256=ab05d1bc06d0d249cbb4871d51e6dca4b9e8474288d86326bd7dd603b9b99820 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,193   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp39-cp39-linux_armv7l.whl#sha256=0f20a256b92c66dbaac370cf1a01b885b10f1371beacaec65ec35ce8ac935afb (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,194   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp39-cp39-linux_armv6l.whl#sha256=0f20a256b92c66dbaac370cf1a01b885b10f1371beacaec65ec35ce8ac935afb (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,194   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp37-cp37m-linux_armv7l.whl#sha256=34809734c61c1fcc4c4de1857dadfb84e726cbfe0dd0b60fce249166d29a3bb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,195   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp37-cp37m-linux_armv6l.whl#sha256=34809734c61c1fcc4c4de1857dadfb84e726cbfe0dd0b60fce249166d29a3bb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,195   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp39-cp39-linux_armv7l.whl#sha256=a8a1cb7f5b851f5f58273e5d12aa871e5086f6bfd844f33f0b4bf20c83f429ec (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,196   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp39-cp39-linux_armv6l.whl#sha256=a8a1cb7f5b851f5f58273e5d12aa871e5086f6bfd844f33f0b4bf20c83f429ec (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,196   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp37-cp37m-linux_armv7l.whl#sha256=93f57ab9c01697fb9f28ed39e4c5c32828e862bf410f556fdbc43c7a72825cb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,197   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp37-cp37m-linux_armv6l.whl#sha256=93f57ab9c01697fb9f28ed39e4c5c32828e862bf410f556fdbc43c7a72825cb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,198   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp39-cp39-linux_armv7l.whl#sha256=de79a8099ce28793ecc89cf8dfbcb6542a270d00290c96903280f704e2ec22e7 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,198   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp39-cp39-linux_armv6l.whl#sha256=de79a8099ce28793ecc89cf8dfbcb6542a270d00290c96903280f704e2ec22e7 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,199   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp37-cp37m-linux_armv7l.whl#sha256=25d1bdfd25f377e21e8a522d9f3cd2ce3896cf857957c8ec876c69f4de8d53f5 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,199   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp37-cp37m-linux_armv6l.whl#sha256=25d1bdfd25f377e21e8a522d9f3cd2ce3896cf857957c8ec876c69f4de8d53f5 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,200   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp39-cp39-linux_armv7l.whl#sha256=c1983524eecc8638287c4a1e09dda961635e861bf6f9342dc566a9f9a4c0b771 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,200   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp39-cp39-linux_armv6l.whl#sha256=c1983524eecc8638287c4a1e09dda961635e861bf6f9342dc566a9f9a4c0b771 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,201   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp37-cp37m-linux_armv7l.whl#sha256=2d64935710bb05965f486f3bd9f258d8d479dc5c00dc1535ba5e285c8786dcf1 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,202   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp37-cp37m-linux_armv6l.whl#sha256=2d64935710bb05965f486f3bd9f258d8d479dc5c00dc1535ba5e285c8786dcf1 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,202   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp39-cp39-linux_armv7l.whl#sha256=24cfa04ff95ecb68f6d261ba4176e979846a0424ba781a1e314ca233c5206ae7 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,203   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp39-cp39-linux_armv6l.whl#sha256=24cfa04ff95ecb68f6d261ba4176e979846a0424ba781a1e314ca233c5206ae7 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,203   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp37-cp37m-linux_armv7l.whl#sha256=3fa03496ffbd230b85c032f9e1ba3129efbd4c37f6509c6cfef258ce69ed6925 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,204   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp37-cp37m-linux_armv6l.whl#sha256=3fa03496ffbd230b85c032f9e1ba3129efbd4c37f6509c6cfef258ce69ed6925 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,204   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp39-cp39-linux_armv7l.whl#sha256=41b03e81b9cd75c716643741a53b8d4d5aeb1633b5e07091c1a7355b6b44d233 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,205   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp39-cp39-linux_armv6l.whl#sha256=41b03e81b9cd75c716643741a53b8d4d5aeb1633b5e07091c1a7355b6b44d233 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,205   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp37-cp37m-linux_armv7l.whl#sha256=584155aa2ddfa324fcd872934f8b25a296c40b34797209bb754f4a641a5b27eb (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,206   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp37-cp37m-linux_armv6l.whl#sha256=584155aa2ddfa324fcd872934f8b25a296c40b34797209bb754f4a641a5b27eb (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,207   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp39-cp39-linux_armv7l.whl#sha256=1b6361e98ea6ec0f3a7a4cce9ec9569a117c26deb95d0ce2bcea9d6f1f38d503 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,207   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp39-cp39-linux_armv6l.whl#sha256=1b6361e98ea6ec0f3a7a4cce9ec9569a117c26deb95d0ce2bcea9d6f1f38d503 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,208   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp37-cp37m-linux_armv7l.whl#sha256=b0ac5fea57fee9d962de25688ffde053c705daa15588886ea6aa7d5ab0986077 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,208   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp37-cp37m-linux_armv6l.whl#sha256=b0ac5fea57fee9d962de25688ffde053c705daa15588886ea6aa7d5ab0986077 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,209   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.9-cp39-cp39-linux_armv7l.whl#sha256=223cbac9f53d732be3d157f8e68c124c79439d057ec079594c681d7c5327f342 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,209   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.9-cp39-cp39-linux_armv6l.whl#sha256=223cbac9f53d732be3d157f8e68c124c79439d057ec079594c681d7c5327f342 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,210   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.9-cp37-cp37m-linux_armv7l.whl#sha256=a6ee5c9ac5b2648bb87ca08a6491d955004770b58180224d6d24bdb8cec17458 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,210   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.9-cp37-cp37m-linux_armv6l.whl#sha256=a6ee5c9ac5b2648bb87ca08a6491d955004770b58180224d6d24bdb8cec17458 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,211   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp39-cp39-linux_armv7l.whl#sha256=c18e44dbd9cf047134d440ff4fbb18722a3fdb0f348d431e8b7bed7dd398bd6e (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,211   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp39-cp39-linux_armv6l.whl#sha256=c18e44dbd9cf047134d440ff4fbb18722a3fdb0f348d431e8b7bed7dd398bd6e (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,212   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp37-cp37m-linux_armv7l.whl#sha256=19e3b710f4af1a0cb530060979c4216d87f0bd8a71e9f41824cf3565abbcbbdb (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,213   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp37-cp37m-linux_armv6l.whl#sha256=19e3b710f4af1a0cb530060979c4216d87f0bd8a71e9f41824cf3565abbcbbdb (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,213   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.7-cp39-cp39-linux_armv7l.whl#sha256=53a48e2a1781a9ae00e1f905778bad58715b08cff2ed4605148de1e481c9d50e (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,214   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.7-cp39-cp39-linux_armv6l.whl#sha256=53a48e2a1781a9ae00e1f905778bad58715b08cff2ed4605148de1e481c9d50e (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,215   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.7-cp37-cp37m-linux_armv7l.whl#sha256=8e63b6afb6715f46aae20e77b81958cdc652a7b1b6d294c5d559f7f06d5a5106 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,215   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.7-cp37-cp37m-linux_armv6l.whl#sha256=8e63b6afb6715f46aae20e77b81958cdc652a7b1b6d294c5d559f7f06d5a5106 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,216   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.6-cp39-cp39-linux_armv7l.whl#sha256=d5e470ed8514697a92a69cccdc99ddf6da22ddde2cc24b3e6ed949645778116f (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,216   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.6-cp39-cp39-linux_armv6l.whl#sha256=d5e470ed8514697a92a69cccdc99ddf6da22ddde2cc24b3e6ed949645778116f (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,217   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.6-cp37-cp37m-linux_armv7l.whl#sha256=a85d0cfa7da9e3593e97f1c63822eb0a9733744fdeb19c3bbd09e1f4242e1d91 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,217   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.6-cp37-cp37m-linux_armv6l.whl#sha256=a85d0cfa7da9e3593e97f1c63822eb0a9733744fdeb19c3bbd09e1f4242e1d91 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,218   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp311-cp311-linux_armv7l.whl#sha256=901c091adc4fc8b89c9de8f139d92aeffbfb6dc91799f2f9019f61646044ddd7 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,218   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp311-cp311-linux_armv6l.whl#sha256=901c091adc4fc8b89c9de8f139d92aeffbfb6dc91799f2f9019f61646044ddd7 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,219   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp39-cp39-linux_armv7l.whl#sha256=55bb6252b29c31ce9b46ca6dc68ed50a4fbe0e44a1b3f8f6f57b13faf1c939c1 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,220   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp39-cp39-linux_armv6l.whl#sha256=55bb6252b29c31ce9b46ca6dc68ed50a4fbe0e44a1b3f8f6f57b13faf1c939c1 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,220   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp37-cp37m-linux_armv7l.whl#sha256=2670c23b960766e0d52c54881bf4a8a663345f17190e380f84a273d51c8cdb3f (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,221   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp37-cp37m-linux_armv6l.whl#sha256=2670c23b960766e0d52c54881bf4a8a663345f17190e380f84a273d51c8cdb3f (from https://www.piwheels.org/simple/moleculekit/)
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2023-10-24T11:43:43,232   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.3.2-py3-none-any.whl#sha256=0f9deb57395d35af8d9e4300bd57eb6fb5537feb62576b4df5611326e007a946 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,233   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.3.1-py3-none-any.whl#sha256=b5d47dfce102b3af0001276b5d6fda0f055e2ef4f0076a06286d3b5e4f2361b4 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,233   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.3.0-py3-none-any.whl#sha256=864f229abf24e864927569f3a17c74c39b977d8b7ba63cf2792e71f2c925eebd (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,234   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.2.9-py3-none-any.whl#sha256=76a22c44b710351a9d3c94d7e7c1d96c61e90251004b2a34cdcc92280d423a09 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,234   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.2.8-py3-none-any.whl#sha256=6bb04aee6023e232156e64c6b7dc4510dc0dd6ccc5a0ff5150e2de459d264da4 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,235   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.2.7-py3-none-any.whl#sha256=ff4f13b39afd18f94633a4d933baf6fee5e9836a09d545b8bcca21de12600b24 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,235   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.2.6-py3-none-any.whl#sha256=1642c66ce5ad47055acb7eaa76a2c208cf2e5b69c53ba3d24e4b79ebe27dc84d (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,236   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.2.5-py3-none-any.whl#sha256=bc056cd58574a951b4acf332b139c10194619398cd922d83d45906c41aab9c61 (from https://www.piwheels.org/simple/moleculekit/)
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2023-10-24T11:43:43,243   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.24-py3-none-any.whl#sha256=13d00e3b7c8c41bc82131fa7f6df5c575b3ed0efc89b715f8ee35bb68dbe1b68 (from https://www.piwheels.org/simple/moleculekit/)
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2023-10-24T11:43:43,244   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.22-py3-none-any.whl#sha256=4bdcc64f301cdd7a24c6f2b0d515152bbde40124568d72b2046003aba6d7d34c (from https://www.piwheels.org/simple/moleculekit/)
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2023-10-24T11:43:43,245   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.19-py3-none-any.whl#sha256=1005a5a682737b1ba3f4858ca3919c129caae8d962bf750308e4cf6e7d37e215 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,245   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.17-py3-none-any.whl#sha256=cd99998c6c3ee48df7148cec7161f3696beede842d4e93bb9da19fa9e2c6c459 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,246   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.16-py3-none-any.whl#sha256=8045990a2fc7c805a4ab8244abe9eae67ac92495cbce12f1c9e8b0daa26a77b1 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,247   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.15-py3-none-any.whl#sha256=4db5d8b5350b36ce41d225c471f0fdd64f708826935ac50675fb278c00275339 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,247   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.14-py3-none-any.whl#sha256=051435884ce3f924fc9ba4dcb342a0d0ac85ff52bda6e656389f9a6f7eefec84 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,248   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.12-py3-none-any.whl#sha256=8d96fbe0cf32ec0d217201a2f3274aedc42fb18f06b218394d4be0bfee25181a (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,249   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.9-py3-none-any.whl#sha256=f91729081bef559daf39b7eecfd7ae81dbd90706ad12061dc95146e3737a7385 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,249   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.8-py3-none-any.whl#sha256=716d25ae18a4a9a3c8cfb1f0b0399f72463490e4f85a66631f3e77c0ddc427e3 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,250   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.7-py3-none-any.whl#sha256=899ef09b80e1ad2e3931cb2023fae09cfeecd45b83fade6c8e8739126ca67a20 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,250   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.6-py3-none-any.whl#sha256=0a288cd1efd660482dcc967caed02315dd8f02c19a0287eee0b8519d761db1b3 (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,251   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.5-py3-none-any.whl#sha256=2f111e31b3f90e63ca0154c528585208b8bd41a065aa0078325683f4b36eacec (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,251   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.4-py3-none-any.whl#sha256=5784491ff294e145a00311f8239aaa0b92c12605db0508ee3e10469b80d4cadd (from https://www.piwheels.org/simple/moleculekit/)
2023-10-24T11:43:43,252 Skipping link: not a file: https://www.piwheels.org/simple/moleculekit/
2023-10-24T11:43:43,253 Skipping link: not a file: https://pypi.org/simple/moleculekit/
2023-10-24T11:43:43,294 Given no hashes to check 1 links for project 'moleculekit': discarding no candidates
2023-10-24T11:43:43,315 Collecting moleculekit==1.8.5
2023-10-24T11:43:43,317   Created temporary directory: /tmp/pip-unpack-uydjjq5m
2023-10-24T11:43:43,539   Downloading moleculekit-1.8.5.tar.gz (6.2 MB)
2023-10-24T11:43:45,785   Added moleculekit==1.8.5 from https://files.pythonhosted.org/packages/15/bb/f88884d7710aeb6290c69f180df912ce73beb4975ceea9f58aa28250737c/moleculekit-1.8.5.tar.gz to build tracker '/tmp/pip-build-tracker-rjjyoarw'
2023-10-24T11:43:45,793   Created temporary directory: /tmp/pip-build-env-nd_a50iv
2023-10-24T11:43:45,798   Installing build dependencies: started
2023-10-24T11:43:45,800   Running command pip subprocess to install build dependencies
2023-10-24T11:43:47,050   Using pip 23.3.1 from /home/piwheels/.local/lib/python3.11/site-packages/pip (python 3.11)
2023-10-24T11:43:47,619   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-10-24T11:43:49,055   Collecting setuptools
2023-10-24T11:43:49,069     Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.2.2-py3-none-any.whl (807 kB)
2023-10-24T11:43:49,689     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/3a/be/650f9c091ef71cb01d735775d554e068752d3ff63d7943b26316dc401749/numpy-1.21.2.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2023-10-24T11:43:49,693     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/5f/d6/ad58ded26556eaeaa8c971e08b6466f17c4ac4d786cd3d800e26ce59cc01/numpy-1.21.3.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2023-10-24T11:43:49,696     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/fb/48/b0708ebd7718a8933f0d3937513ef8ef2f4f04529f1f66ca86d873043921/numpy-1.21.4.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2023-10-24T11:43:49,699     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/c2/a8/a924a09492bdfee8c2ec3094d0a13f2799800b4fdc9c890738aeeb12c72e/numpy-1.21.5.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2023-10-24T11:43:49,703     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/45/b7/de7b8e67f2232c26af57c205aaad29fe17754f793404f59c8a730c7a191a/numpy-1.21.6.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2023-10-24T11:43:49,962   Collecting numpy>=1.18.5
2023-10-24T11:43:49,978     Using cached https://www.piwheels.org/simple/numpy/numpy-1.26.1-cp311-cp311-linux_armv7l.whl (19.5 MB)
2023-10-24T11:43:51,588   Collecting Cython>=0.29.21
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2023-10-24T11:43:52,021   Collecting toml
2023-10-24T11:43:52,038     Downloading https://www.piwheels.org/simple/toml/toml-0.10.2-py2.py3-none-any.whl (16 kB)
2023-10-24T11:43:52,136   Collecting versioneer==0.28 (from versioneer[toml]==0.28)
2023-10-24T11:43:52,236     Downloading https://www.piwheels.org/simple/versioneer/versioneer-0.28-py3-none-any.whl (45 kB)
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2023-10-24T11:43:55,017   Installing collected packages: versioneer, toml, setuptools, numpy, Cython
2023-10-24T11:43:55,047     Creating /tmp/pip-build-env-nd_a50iv/overlay/local/bin
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2023-10-24T11:44:10,281   Successfully installed Cython-3.0.4 numpy-1.26.1 setuptools-68.2.2 toml-0.10.2 versioneer-0.28
2023-10-24T11:44:10,929   Installing build dependencies: finished with status 'done'
2023-10-24T11:44:10,932   Getting requirements to build wheel: started
2023-10-24T11:44:10,934   Running command Getting requirements to build wheel
2023-10-24T11:44:46,477   Compiling moleculekit/interactions/hbonds/hbonds.pyx because it depends on /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libcpp/vector.pxd.
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2023-10-24T11:44:46,479   Compiling moleculekit/interactions/sigmahole/sigmahole.pyx because it depends on /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libcpp/vector.pxd.
2023-10-24T11:44:46,480   Compiling moleculekit/wrapping/wrapping.pyx because it depends on /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libcpp/vector.pxd.
2023-10-24T11:44:46,480   Compiling moleculekit/bondguesser_utils/bondguesser_utils.pyx because it depends on /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libcpp/vector.pxd.
2023-10-24T11:44:46,481   Compiling moleculekit/atomselect_utils/atomselect_utils.pyx because it depends on /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libcpp/vector.pxd.
2023-10-24T11:44:46,482   Compiling moleculekit/distance_utils/distance_utils.pyx because it depends on /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libcpp/vector.pxd.
2023-10-24T11:44:46,482   Compiling moleculekit/occupancy_utils/occupancy_utils.pyx because it depends on /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libcpp/vector.pxd.
2023-10-24T11:44:46,483   Compiling moleculekit/xtc_utils/xtc.pyx because it depends on /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libc/string.pxd.
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2023-10-24T11:44:46,755   running egg_info
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2023-10-24T11:44:46,791   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
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2023-10-24T11:44:46,822   reading manifest file 'moleculekit.egg-info/SOURCES.txt'
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2023-10-24T11:44:48,419   Getting requirements to build wheel: finished with status 'done'
2023-10-24T11:44:48,433   Installing backend dependencies: started
2023-10-24T11:44:48,435   Running command pip subprocess to install backend dependencies
2023-10-24T11:44:49,703   Using pip 23.3.1 from /home/piwheels/.local/lib/python3.11/site-packages/pip (python 3.11)
2023-10-24T11:44:50,292   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-10-24T11:44:50,816   Collecting wheel
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2023-10-24T11:44:53,454     Creating /tmp/pip-build-env-nd_a50iv/normal/local/bin
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2023-10-24T11:44:53,925   Created temporary directory: /tmp/pip-modern-metadata-0zawfcsq
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2023-10-24T11:44:53,929   Running command Preparing metadata (pyproject.toml)
2023-10-24T11:44:56,231   running dist_info
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2023-10-24T11:44:56,272   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,273   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,273   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,274   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,275   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,275   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,276   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,277   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,277   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,278   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,278   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,279   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,280   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,280   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,281   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,281   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,282   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,282   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,283   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,284   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,284   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,285   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,285   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,286   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,287   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,287   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,288   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,288   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,289   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,290   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,290   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,291   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,292   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,292   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,293   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,293   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,294   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,294   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,294   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,295   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,295   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,296   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,296   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,297   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,297   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,298   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,298   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,299   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,299   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,300   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,301   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,301   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:56,301   reading manifest file '/tmp/pip-modern-metadata-0zawfcsq/moleculekit.egg-info/SOURCES.txt'
2023-10-24T11:44:56,302   reading manifest template 'MANIFEST.in'
2023-10-24T11:44:56,537   no previously-included directories found matching 'moleculekit/test-data'
2023-10-24T11:44:56,538   no previously-included directories found matching 'moleculekit/tests'
2023-10-24T11:44:56,539   no previously-included directories found matching 'package'
2023-10-24T11:44:56,539   adding license file 'LICENSE'
2023-10-24T11:44:56,550   writing manifest file '/tmp/pip-modern-metadata-0zawfcsq/moleculekit.egg-info/SOURCES.txt'
2023-10-24T11:44:56,557   creating '/tmp/pip-modern-metadata-0zawfcsq/moleculekit-1.8.5.dist-info'
2023-10-24T11:44:56,785   Preparing metadata (pyproject.toml): finished with status 'done'
2023-10-24T11:44:56,790   Source in /tmp/pip-wheel-bw1usl56/moleculekit_4289113f6e344cd0aaad9bc148472f10 has version 1.8.5, which satisfies requirement moleculekit==1.8.5 from https://files.pythonhosted.org/packages/15/bb/f88884d7710aeb6290c69f180df912ce73beb4975ceea9f58aa28250737c/moleculekit-1.8.5.tar.gz
2023-10-24T11:44:56,791   Removed moleculekit==1.8.5 from https://files.pythonhosted.org/packages/15/bb/f88884d7710aeb6290c69f180df912ce73beb4975ceea9f58aa28250737c/moleculekit-1.8.5.tar.gz from build tracker '/tmp/pip-build-tracker-rjjyoarw'
2023-10-24T11:44:56,796 Created temporary directory: /tmp/pip-unpack-94ep5hy2
2023-10-24T11:44:56,797 Created temporary directory: /tmp/pip-unpack-dipgc7xr
2023-10-24T11:44:56,805 Building wheels for collected packages: moleculekit
2023-10-24T11:44:56,809   Created temporary directory: /tmp/pip-wheel-0n5zmhh7
2023-10-24T11:44:56,810   Destination directory: /tmp/pip-wheel-0n5zmhh7
2023-10-24T11:44:56,812   Building wheel for moleculekit (pyproject.toml): started
2023-10-24T11:44:56,813   Running command Building wheel for moleculekit (pyproject.toml)
2023-10-24T11:44:58,979   running bdist_wheel
2023-10-24T11:44:58,994   running build
2023-10-24T11:44:58,994   running build_py
2023-10-24T11:44:59,001   creating build
2023-10-24T11:44:59,001   creating build/lib.linux-armv7l-cpython-311
2023-10-24T11:44:59,002   creating build/lib.linux-armv7l-cpython-311/moleculekit
2023-10-24T11:44:59,004   copying moleculekit/vmdviewer.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-10-24T11:44:59,007   copying moleculekit/distance.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-10-24T11:44:59,008   copying moleculekit/align.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-10-24T11:44:59,011   copying moleculekit/readers.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-10-24T11:44:59,017   copying moleculekit/rcsb.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-10-24T11:44:59,019   copying moleculekit/pymolgraphics.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-10-24T11:44:59,021   copying moleculekit/writers.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-10-24T11:44:59,026   copying moleculekit/config.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-10-24T11:44:59,028   copying moleculekit/version.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-10-24T11:44:59,030   copying moleculekit/home.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-10-24T11:44:59,032   copying moleculekit/bondguesser.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-10-24T11:44:59,035   copying moleculekit/vmdgraphics.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-10-24T11:44:59,037   copying moleculekit/molecule.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-10-24T11:44:59,083   copying moleculekit/rdkitintegration.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-10-24T11:44:59,085   copying moleculekit/_version.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-10-24T11:44:59,086   copying moleculekit/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-10-24T11:44:59,088   copying moleculekit/dihedral.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-10-24T11:44:59,090   copying moleculekit/opm.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-10-24T11:44:59,092   copying moleculekit/util.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-10-24T11:44:59,095   copying moleculekit/viewer.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-10-24T11:44:59,097   copying moleculekit/periodictable.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-10-24T11:44:59,100   creating build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-10-24T11:44:59,101   copying moleculekit/tools/voxeldescriptors.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-10-24T11:44:59,104   copying moleculekit/tools/hhblitsprofile.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-10-24T11:44:59,106   copying moleculekit/tools/docking.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-10-24T11:44:59,108   copying moleculekit/tools/graphalignment.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-10-24T11:44:59,111   copying moleculekit/tools/detect.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-10-24T11:44:59,114   copying moleculekit/tools/crystalpacking.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-10-24T11:44:59,116   copying moleculekit/tools/preparation_customres.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-10-24T11:44:59,119   copying moleculekit/tools/preparation.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-10-24T11:44:59,123   copying moleculekit/tools/autosegment.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-10-24T11:44:59,126   copying moleculekit/tools/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-10-24T11:44:59,128   copying moleculekit/tools/moleculechecks.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-10-24T11:44:59,130   copying moleculekit/tools/atomtyper.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-10-24T11:44:59,132   copying moleculekit/tools/sequencestructuralalignment.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2023-10-24T11:44:59,135   creating build/lib.linux-armv7l-cpython-311/moleculekit/ply
2023-10-24T11:44:59,136   copying moleculekit/ply/yacc.py -> build/lib.linux-armv7l-cpython-311/moleculekit/ply
2023-10-24T11:44:59,140   copying moleculekit/ply/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/ply
2023-10-24T11:44:59,142   copying moleculekit/ply/lex.py -> build/lib.linux-armv7l-cpython-311/moleculekit/ply
2023-10-24T11:44:59,145   creating build/lib.linux-armv7l-cpython-311/moleculekit/smallmol
2023-10-24T11:44:59,146   copying moleculekit/smallmol/test_smallmol.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol
2023-10-24T11:44:59,148   copying moleculekit/smallmol/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol
2023-10-24T11:44:59,150   copying moleculekit/smallmol/test_smallmollib.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol
2023-10-24T11:44:59,152   copying moleculekit/smallmol/util.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol
2023-10-24T11:44:59,155   copying moleculekit/smallmol/smallmol.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol
2023-10-24T11:44:59,158   copying moleculekit/smallmol/smallmollib.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol
2023-10-24T11:44:59,161   creating build/lib.linux-armv7l-cpython-311/moleculekit/pdbx
2023-10-24T11:44:59,162   copying moleculekit/pdbx/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx
2023-10-24T11:44:59,163   creating build/lib.linux-armv7l-cpython-311/moleculekit/interactions
2023-10-24T11:44:59,164   copying moleculekit/interactions/interactions.py -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions
2023-10-24T11:44:59,167   copying moleculekit/interactions/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions
2023-10-24T11:44:59,169   creating build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-10-24T11:44:59,170   copying moleculekit/projections/metricsasa.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-10-24T11:44:59,172   copying moleculekit/projections/metricrmsd.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-10-24T11:44:59,175   copying moleculekit/projections/metriccoordinate.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-10-24T11:44:59,177   copying moleculekit/projections/metricshell.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-10-24T11:44:59,179   copying moleculekit/projections/metricdihedral.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-10-24T11:44:59,182   copying moleculekit/projections/metricsphericalcoordinate.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-10-24T11:44:59,184   copying moleculekit/projections/metricfluctuation.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-10-24T11:44:59,186   copying moleculekit/projections/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-10-24T11:44:59,188   copying moleculekit/projections/metricplumed2.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-10-24T11:44:59,191   copying moleculekit/projections/projection.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-10-24T11:44:59,193   copying moleculekit/projections/util.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-10-24T11:44:59,195   copying moleculekit/projections/metricdistance.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-10-24T11:44:59,197   copying moleculekit/projections/metricgyration.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-10-24T11:44:59,200   copying moleculekit/projections/metrictmscore.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-10-24T11:44:59,202   copying moleculekit/projections/metricsecondarystructure.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2023-10-24T11:44:59,205   creating build/lib.linux-armv7l-cpython-311/moleculekit/atomselect
2023-10-24T11:44:59,206   copying moleculekit/atomselect/languageparser.py -> build/lib.linux-armv7l-cpython-311/moleculekit/atomselect
2023-10-24T11:44:59,208   copying moleculekit/atomselect/atomselect.py -> build/lib.linux-armv7l-cpython-311/moleculekit/atomselect
2023-10-24T11:44:59,211   copying moleculekit/atomselect/analyze.py -> build/lib.linux-armv7l-cpython-311/moleculekit/atomselect
2023-10-24T11:44:59,213   copying moleculekit/atomselect/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/atomselect
2023-10-24T11:44:59,216   creating build/lib.linux-armv7l-cpython-311/moleculekit/tools/obabel_tools
2023-10-24T11:44:59,217   copying moleculekit/tools/obabel_tools/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools/obabel_tools
2023-10-24T11:44:59,219   copying moleculekit/tools/obabel_tools/obabel_cli.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools/obabel_tools
2023-10-24T11:44:59,221   creating build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools
2023-10-24T11:44:59,222   copying moleculekit/smallmol/tools/test_tools.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools
2023-10-24T11:44:59,224   copying moleculekit/smallmol/tools/clustering.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools
2023-10-24T11:44:59,227   copying moleculekit/smallmol/tools/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools
2023-10-24T11:44:59,228   copying moleculekit/smallmol/tools/restrainedembed.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools
2023-10-24T11:44:59,230   creating build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests
2023-10-24T11:44:59,231   copying moleculekit/pdbx/tests/PdbxReaderTests.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests
2023-10-24T11:44:59,234   copying moleculekit/pdbx/tests/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests
2023-10-24T11:44:59,235   copying moleculekit/pdbx/tests/PdbxReadWriteTests.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests
2023-10-24T11:44:59,237   copying moleculekit/pdbx/tests/PdbxWriterTests.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests
2023-10-24T11:44:59,239   creating build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader
2023-10-24T11:44:59,240   copying moleculekit/pdbx/reader/PdbxContainers.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader
2023-10-24T11:44:59,243   copying moleculekit/pdbx/reader/PdbxParser.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader
2023-10-24T11:44:59,246   copying moleculekit/pdbx/reader/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader
2023-10-24T11:44:59,247   copying moleculekit/pdbx/reader/PdbxReader.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader
2023-10-24T11:44:59,250   creating build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/writer
2023-10-24T11:44:59,251   copying moleculekit/pdbx/writer/PdbxWriter.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/writer
2023-10-24T11:44:59,254   copying moleculekit/pdbx/writer/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/writer
2023-10-24T11:44:59,255   running egg_info
2023-10-24T11:44:59,260   writing moleculekit.egg-info/PKG-INFO
2023-10-24T11:44:59,263   writing dependency_links to moleculekit.egg-info/dependency_links.txt
2023-10-24T11:44:59,264   writing requirements to moleculekit.egg-info/requires.txt
2023-10-24T11:44:59,265   writing top-level names to moleculekit.egg-info/top_level.txt
2023-10-24T11:44:59,277   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,278   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,279   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,279   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,280   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,280   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,281   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,282   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,283   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,283   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,283   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,284   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,284   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,285   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,285   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,286   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,286   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,287   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,287   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,288   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,289   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,289   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,290   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,291   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,291   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,292   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,292   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,293   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,294   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,294   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,295   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,295   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,296   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,296   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,296   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,297   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,297   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,298   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,299   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,299   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,300   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,300   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,301   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,301   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,302   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,303   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,303   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,304   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,304   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,304   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,305   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,305   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,306   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,306   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,307   dependency /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-24T11:44:59,307   reading manifest file 'moleculekit.egg-info/SOURCES.txt'
2023-10-24T11:44:59,308   reading manifest template 'MANIFEST.in'
2023-10-24T11:44:59,526   no previously-included directories found matching 'moleculekit/test-data'
2023-10-24T11:44:59,527   no previously-included directories found matching 'moleculekit/tests'
2023-10-24T11:44:59,529   no previously-included directories found matching 'package'
2023-10-24T11:44:59,529   adding license file 'LICENSE'
2023-10-24T11:44:59,543   writing manifest file 'moleculekit.egg-info/SOURCES.txt'
2023-10-24T11:44:59,552   /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.atomselect_utils' is absent from the `packages` configuration.
2023-10-24T11:44:59,553   !!

2023-10-24T11:44:59,554           ********************************************************************************
2023-10-24T11:44:59,555           ############################
2023-10-24T11:44:59,555           # Package would be ignored #
2023-10-24T11:44:59,556           ############################
2023-10-24T11:44:59,556           Python recognizes 'moleculekit.atomselect_utils' as an importable package[^1],
2023-10-24T11:44:59,557           but it is absent from setuptools' `packages` configuration.

2023-10-24T11:44:59,558           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-24T11:44:59,559           package, please make sure that 'moleculekit.atomselect_utils' is explicitly added
2023-10-24T11:44:59,560           to the `packages` configuration field.

2023-10-24T11:44:59,561           Alternatively, you can also rely on setuptools' discovery methods
2023-10-24T11:44:59,561           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-24T11:44:59,562           instead of `find_packages(...)`/`find:`).

2023-10-24T11:44:59,563           You can read more about "package discovery" on setuptools documentation page:

2023-10-24T11:44:59,564           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-24T11:44:59,564           If you don't want 'moleculekit.atomselect_utils' to be distributed and are
2023-10-24T11:44:59,565           already explicitly excluding 'moleculekit.atomselect_utils' via
2023-10-24T11:44:59,565           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-24T11:44:59,566           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-24T11:44:59,566           combination with a more fine grained `package-data` configuration.

2023-10-24T11:44:59,567           You can read more about "package data files" on setuptools documentation page:

2023-10-24T11:44:59,568           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-24T11:44:59,570           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-24T11:44:59,570                 even if it does not contain any `.py` files.
2023-10-24T11:44:59,571                 On the other hand, currently there is no concept of package data
2023-10-24T11:44:59,571                 directory, all directories are treated like packages.
2023-10-24T11:44:59,571           ********************************************************************************

2023-10-24T11:44:59,573   !!
2023-10-24T11:44:59,573     check.warn(importable)
2023-10-24T11:44:59,574   /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.bondguesser_utils' is absent from the `packages` configuration.
2023-10-24T11:44:59,574   !!

2023-10-24T11:44:59,575           ********************************************************************************
2023-10-24T11:44:59,576           ############################
2023-10-24T11:44:59,576           # Package would be ignored #
2023-10-24T11:44:59,577           ############################
2023-10-24T11:44:59,577           Python recognizes 'moleculekit.bondguesser_utils' as an importable package[^1],
2023-10-24T11:44:59,578           but it is absent from setuptools' `packages` configuration.

2023-10-24T11:44:59,579           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-24T11:44:59,580           package, please make sure that 'moleculekit.bondguesser_utils' is explicitly added
2023-10-24T11:44:59,580           to the `packages` configuration field.

2023-10-24T11:44:59,582           Alternatively, you can also rely on setuptools' discovery methods
2023-10-24T11:44:59,582           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-24T11:44:59,583           instead of `find_packages(...)`/`find:`).

2023-10-24T11:44:59,584           You can read more about "package discovery" on setuptools documentation page:

2023-10-24T11:44:59,586           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-24T11:44:59,587           If you don't want 'moleculekit.bondguesser_utils' to be distributed and are
2023-10-24T11:44:59,587           already explicitly excluding 'moleculekit.bondguesser_utils' via
2023-10-24T11:44:59,588           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-24T11:44:59,589           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-24T11:44:59,589           combination with a more fine grained `package-data` configuration.

2023-10-24T11:44:59,591           You can read more about "package data files" on setuptools documentation page:

2023-10-24T11:44:59,593           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-24T11:44:59,594           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-24T11:44:59,595                 even if it does not contain any `.py` files.
2023-10-24T11:44:59,595                 On the other hand, currently there is no concept of package data
2023-10-24T11:44:59,596                 directory, all directories are treated like packages.
2023-10-24T11:44:59,596           ********************************************************************************

2023-10-24T11:44:59,597   !!
2023-10-24T11:44:59,598     check.warn(importable)
2023-10-24T11:44:59,598   /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.distance_utils' is absent from the `packages` configuration.
2023-10-24T11:44:59,599   !!

2023-10-24T11:44:59,600           ********************************************************************************
2023-10-24T11:44:59,600           ############################
2023-10-24T11:44:59,601           # Package would be ignored #
2023-10-24T11:44:59,601           ############################
2023-10-24T11:44:59,602           Python recognizes 'moleculekit.distance_utils' as an importable package[^1],
2023-10-24T11:44:59,603           but it is absent from setuptools' `packages` configuration.

2023-10-24T11:44:59,604           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-24T11:44:59,604           package, please make sure that 'moleculekit.distance_utils' is explicitly added
2023-10-24T11:44:59,605           to the `packages` configuration field.

2023-10-24T11:44:59,607           Alternatively, you can also rely on setuptools' discovery methods
2023-10-24T11:44:59,607           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-24T11:44:59,608           instead of `find_packages(...)`/`find:`).

2023-10-24T11:44:59,609           You can read more about "package discovery" on setuptools documentation page:

2023-10-24T11:44:59,611           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-24T11:44:59,612           If you don't want 'moleculekit.distance_utils' to be distributed and are
2023-10-24T11:44:59,613           already explicitly excluding 'moleculekit.distance_utils' via
2023-10-24T11:44:59,613           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-24T11:44:59,614           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-24T11:44:59,615           combination with a more fine grained `package-data` configuration.

2023-10-24T11:44:59,616           You can read more about "package data files" on setuptools documentation page:

2023-10-24T11:44:59,618           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-24T11:44:59,620           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-24T11:44:59,621                 even if it does not contain any `.py` files.
2023-10-24T11:44:59,621                 On the other hand, currently there is no concept of package data
2023-10-24T11:44:59,622                 directory, all directories are treated like packages.
2023-10-24T11:44:59,623           ********************************************************************************

2023-10-24T11:44:59,624   !!
2023-10-24T11:44:59,625     check.warn(importable)
2023-10-24T11:44:59,626   /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.interactions.cationpi' is absent from the `packages` configuration.
2023-10-24T11:44:59,627   !!

2023-10-24T11:44:59,633           ********************************************************************************
2023-10-24T11:44:59,637           ############################
2023-10-24T11:44:59,648           # Package would be ignored #
2023-10-24T11:44:59,653           ############################
2023-10-24T11:44:59,654           Python recognizes 'moleculekit.interactions.cationpi' as an importable package[^1],
2023-10-24T11:44:59,655           but it is absent from setuptools' `packages` configuration.

2023-10-24T11:44:59,656           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-24T11:44:59,657           package, please make sure that 'moleculekit.interactions.cationpi' is explicitly added
2023-10-24T11:44:59,658           to the `packages` configuration field.

2023-10-24T11:44:59,659           Alternatively, you can also rely on setuptools' discovery methods
2023-10-24T11:44:59,660           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-24T11:44:59,661           instead of `find_packages(...)`/`find:`).

2023-10-24T11:44:59,675           You can read more about "package discovery" on setuptools documentation page:

2023-10-24T11:44:59,680           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-24T11:44:59,688           If you don't want 'moleculekit.interactions.cationpi' to be distributed and are
2023-10-24T11:44:59,689           already explicitly excluding 'moleculekit.interactions.cationpi' via
2023-10-24T11:44:59,689           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-24T11:44:59,690           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-24T11:44:59,690           combination with a more fine grained `package-data` configuration.

2023-10-24T11:44:59,692           You can read more about "package data files" on setuptools documentation page:

2023-10-24T11:44:59,693           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-24T11:44:59,694           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-24T11:44:59,695                 even if it does not contain any `.py` files.
2023-10-24T11:44:59,696                 On the other hand, currently there is no concept of package data
2023-10-24T11:44:59,696                 directory, all directories are treated like packages.
2023-10-24T11:44:59,697           ********************************************************************************

2023-10-24T11:44:59,698   !!
2023-10-24T11:44:59,699     check.warn(importable)
2023-10-24T11:44:59,700   /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.interactions.hbonds' is absent from the `packages` configuration.
2023-10-24T11:44:59,710   !!

2023-10-24T11:44:59,713           ********************************************************************************
2023-10-24T11:44:59,714           ############################
2023-10-24T11:44:59,714           # Package would be ignored #
2023-10-24T11:44:59,715           ############################
2023-10-24T11:44:59,716           Python recognizes 'moleculekit.interactions.hbonds' as an importable package[^1],
2023-10-24T11:44:59,716           but it is absent from setuptools' `packages` configuration.

2023-10-24T11:44:59,718           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-24T11:44:59,718           package, please make sure that 'moleculekit.interactions.hbonds' is explicitly added
2023-10-24T11:44:59,719           to the `packages` configuration field.

2023-10-24T11:44:59,720           Alternatively, you can also rely on setuptools' discovery methods
2023-10-24T11:44:59,721           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-24T11:44:59,721           instead of `find_packages(...)`/`find:`).

2023-10-24T11:44:59,729           You can read more about "package discovery" on setuptools documentation page:

2023-10-24T11:44:59,733           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-24T11:44:59,739           If you don't want 'moleculekit.interactions.hbonds' to be distributed and are
2023-10-24T11:44:59,740           already explicitly excluding 'moleculekit.interactions.hbonds' via
2023-10-24T11:44:59,741           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-24T11:44:59,742           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-24T11:44:59,742           combination with a more fine grained `package-data` configuration.

2023-10-24T11:44:59,743           You can read more about "package data files" on setuptools documentation page:

2023-10-24T11:44:59,744           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-24T11:44:59,747           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-24T11:44:59,748                 even if it does not contain any `.py` files.
2023-10-24T11:44:59,749                 On the other hand, currently there is no concept of package data
2023-10-24T11:44:59,750                 directory, all directories are treated like packages.
2023-10-24T11:44:59,750           ********************************************************************************

2023-10-24T11:44:59,760   !!
2023-10-24T11:44:59,760     check.warn(importable)
2023-10-24T11:44:59,761   /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.interactions.pipi' is absent from the `packages` configuration.
2023-10-24T11:44:59,761   !!

2023-10-24T11:44:59,762           ********************************************************************************
2023-10-24T11:44:59,763           ############################
2023-10-24T11:44:59,763           # Package would be ignored #
2023-10-24T11:44:59,764           ############################
2023-10-24T11:44:59,765           Python recognizes 'moleculekit.interactions.pipi' as an importable package[^1],
2023-10-24T11:44:59,765           but it is absent from setuptools' `packages` configuration.

2023-10-24T11:44:59,767           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-24T11:44:59,767           package, please make sure that 'moleculekit.interactions.pipi' is explicitly added
2023-10-24T11:44:59,768           to the `packages` configuration field.

2023-10-24T11:44:59,769           Alternatively, you can also rely on setuptools' discovery methods
2023-10-24T11:44:59,770           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-24T11:44:59,771           instead of `find_packages(...)`/`find:`).

2023-10-24T11:44:59,772           You can read more about "package discovery" on setuptools documentation page:

2023-10-24T11:44:59,773           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-24T11:44:59,775           If you don't want 'moleculekit.interactions.pipi' to be distributed and are
2023-10-24T11:44:59,775           already explicitly excluding 'moleculekit.interactions.pipi' via
2023-10-24T11:44:59,776           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-24T11:44:59,776           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-24T11:44:59,777           combination with a more fine grained `package-data` configuration.

2023-10-24T11:44:59,778           You can read more about "package data files" on setuptools documentation page:

2023-10-24T11:44:59,779           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-24T11:44:59,781           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-24T11:44:59,782                 even if it does not contain any `.py` files.
2023-10-24T11:44:59,782                 On the other hand, currently there is no concept of package data
2023-10-24T11:44:59,783                 directory, all directories are treated like packages.
2023-10-24T11:44:59,784           ********************************************************************************

2023-10-24T11:44:59,785   !!
2023-10-24T11:44:59,786     check.warn(importable)
2023-10-24T11:44:59,786   /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.interactions.sigmahole' is absent from the `packages` configuration.
2023-10-24T11:44:59,787   !!

2023-10-24T11:44:59,787           ********************************************************************************
2023-10-24T11:44:59,788           ############################
2023-10-24T11:44:59,788           # Package would be ignored #
2023-10-24T11:44:59,789           ############################
2023-10-24T11:44:59,789           Python recognizes 'moleculekit.interactions.sigmahole' as an importable package[^1],
2023-10-24T11:44:59,790           but it is absent from setuptools' `packages` configuration.

2023-10-24T11:44:59,790           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-24T11:44:59,791           package, please make sure that 'moleculekit.interactions.sigmahole' is explicitly added
2023-10-24T11:44:59,791           to the `packages` configuration field.

2023-10-24T11:44:59,792           Alternatively, you can also rely on setuptools' discovery methods
2023-10-24T11:44:59,793           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-24T11:44:59,793           instead of `find_packages(...)`/`find:`).

2023-10-24T11:44:59,794           You can read more about "package discovery" on setuptools documentation page:

2023-10-24T11:44:59,795           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-24T11:44:59,796           If you don't want 'moleculekit.interactions.sigmahole' to be distributed and are
2023-10-24T11:44:59,797           already explicitly excluding 'moleculekit.interactions.sigmahole' via
2023-10-24T11:44:59,798           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-24T11:44:59,798           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-24T11:44:59,799           combination with a more fine grained `package-data` configuration.

2023-10-24T11:44:59,800           You can read more about "package data files" on setuptools documentation page:

2023-10-24T11:44:59,801           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-24T11:44:59,803           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-24T11:44:59,804                 even if it does not contain any `.py` files.
2023-10-24T11:44:59,805                 On the other hand, currently there is no concept of package data
2023-10-24T11:44:59,805                 directory, all directories are treated like packages.
2023-10-24T11:44:59,806           ********************************************************************************

2023-10-24T11:44:59,807   !!
2023-10-24T11:44:59,808     check.warn(importable)
2023-10-24T11:44:59,808   /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.occupancy_utils' is absent from the `packages` configuration.
2023-10-24T11:44:59,809   !!

2023-10-24T11:44:59,810           ********************************************************************************
2023-10-24T11:44:59,811           ############################
2023-10-24T11:44:59,811           # Package would be ignored #
2023-10-24T11:44:59,812           ############################
2023-10-24T11:44:59,812           Python recognizes 'moleculekit.occupancy_utils' as an importable package[^1],
2023-10-24T11:44:59,813           but it is absent from setuptools' `packages` configuration.

2023-10-24T11:44:59,814           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-24T11:44:59,815           package, please make sure that 'moleculekit.occupancy_utils' is explicitly added
2023-10-24T11:44:59,815           to the `packages` configuration field.

2023-10-24T11:44:59,817           Alternatively, you can also rely on setuptools' discovery methods
2023-10-24T11:44:59,817           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-24T11:44:59,818           instead of `find_packages(...)`/`find:`).

2023-10-24T11:44:59,819           You can read more about "package discovery" on setuptools documentation page:

2023-10-24T11:44:59,820           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-24T11:44:59,820           If you don't want 'moleculekit.occupancy_utils' to be distributed and are
2023-10-24T11:44:59,821           already explicitly excluding 'moleculekit.occupancy_utils' via
2023-10-24T11:44:59,821           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-24T11:44:59,836           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-24T11:44:59,840           combination with a more fine grained `package-data` configuration.

2023-10-24T11:44:59,843           You can read more about "package data files" on setuptools documentation page:

2023-10-24T11:44:59,876           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-24T11:45:00,051           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-24T11:45:00,052                 even if it does not contain any `.py` files.
2023-10-24T11:45:00,053                 On the other hand, currently there is no concept of package data
2023-10-24T11:45:00,053                 directory, all directories are treated like packages.
2023-10-24T11:45:00,054           ********************************************************************************

2023-10-24T11:45:00,055   !!
2023-10-24T11:45:00,056     check.warn(importable)
2023-10-24T11:45:00,057   /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.share' is absent from the `packages` configuration.
2023-10-24T11:45:00,057   !!

2023-10-24T11:45:00,058           ********************************************************************************
2023-10-24T11:45:00,059           ############################
2023-10-24T11:45:00,059           # Package would be ignored #
2023-10-24T11:45:00,060           ############################
2023-10-24T11:45:00,060           Python recognizes 'moleculekit.share' as an importable package[^1],
2023-10-24T11:45:00,061           but it is absent from setuptools' `packages` configuration.

2023-10-24T11:45:00,063           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-24T11:45:00,063           package, please make sure that 'moleculekit.share' is explicitly added
2023-10-24T11:45:00,064           to the `packages` configuration field.

2023-10-24T11:45:00,065           Alternatively, you can also rely on setuptools' discovery methods
2023-10-24T11:45:00,065           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-24T11:45:00,066           instead of `find_packages(...)`/`find:`).

2023-10-24T11:45:00,067           You can read more about "package discovery" on setuptools documentation page:

2023-10-24T11:45:00,069           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-24T11:45:00,070           If you don't want 'moleculekit.share' to be distributed and are
2023-10-24T11:45:00,070           already explicitly excluding 'moleculekit.share' via
2023-10-24T11:45:00,071           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-24T11:45:00,071           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-24T11:45:00,072           combination with a more fine grained `package-data` configuration.

2023-10-24T11:45:00,073           You can read more about "package data files" on setuptools documentation page:

2023-10-24T11:45:00,074           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-24T11:45:00,076           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-24T11:45:00,076                 even if it does not contain any `.py` files.
2023-10-24T11:45:00,077                 On the other hand, currently there is no concept of package data
2023-10-24T11:45:00,077                 directory, all directories are treated like packages.
2023-10-24T11:45:00,078           ********************************************************************************

2023-10-24T11:45:00,079   !!
2023-10-24T11:45:00,079     check.warn(importable)
2023-10-24T11:45:00,080   /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.share.atomselect' is absent from the `packages` configuration.
2023-10-24T11:45:00,080   !!

2023-10-24T11:45:00,081           ********************************************************************************
2023-10-24T11:45:00,081           ############################
2023-10-24T11:45:00,082           # Package would be ignored #
2023-10-24T11:45:00,082           ############################
2023-10-24T11:45:00,083           Python recognizes 'moleculekit.share.atomselect' as an importable package[^1],
2023-10-24T11:45:00,083           but it is absent from setuptools' `packages` configuration.

2023-10-24T11:45:00,084           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-24T11:45:00,085           package, please make sure that 'moleculekit.share.atomselect' is explicitly added
2023-10-24T11:45:00,085           to the `packages` configuration field.

2023-10-24T11:45:00,086           Alternatively, you can also rely on setuptools' discovery methods
2023-10-24T11:45:00,087           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-24T11:45:00,087           instead of `find_packages(...)`/`find:`).

2023-10-24T11:45:00,088           You can read more about "package discovery" on setuptools documentation page:

2023-10-24T11:45:00,089           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-24T11:45:00,090           If you don't want 'moleculekit.share.atomselect' to be distributed and are
2023-10-24T11:45:00,090           already explicitly excluding 'moleculekit.share.atomselect' via
2023-10-24T11:45:00,091           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-24T11:45:00,091           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-24T11:45:00,092           combination with a more fine grained `package-data` configuration.

2023-10-24T11:45:00,093           You can read more about "package data files" on setuptools documentation page:

2023-10-24T11:45:00,094           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-24T11:45:00,095           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-24T11:45:00,096                 even if it does not contain any `.py` files.
2023-10-24T11:45:00,096                 On the other hand, currently there is no concept of package data
2023-10-24T11:45:00,097                 directory, all directories are treated like packages.
2023-10-24T11:45:00,097           ********************************************************************************

2023-10-24T11:45:00,098   !!
2023-10-24T11:45:00,099     check.warn(importable)
2023-10-24T11:45:00,099   /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.share.pdb2pqr.residues' is absent from the `packages` configuration.
2023-10-24T11:45:00,100   !!

2023-10-24T11:45:00,101           ********************************************************************************
2023-10-24T11:45:00,101           ############################
2023-10-24T11:45:00,102           # Package would be ignored #
2023-10-24T11:45:00,103           ############################
2023-10-24T11:45:00,103           Python recognizes 'moleculekit.share.pdb2pqr.residues' as an importable package[^1],
2023-10-24T11:45:00,104           but it is absent from setuptools' `packages` configuration.

2023-10-24T11:45:00,105           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-24T11:45:00,105           package, please make sure that 'moleculekit.share.pdb2pqr.residues' is explicitly added
2023-10-24T11:45:00,105           to the `packages` configuration field.

2023-10-24T11:45:00,106           Alternatively, you can also rely on setuptools' discovery methods
2023-10-24T11:45:00,107           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-24T11:45:00,107           instead of `find_packages(...)`/`find:`).

2023-10-24T11:45:00,108           You can read more about "package discovery" on setuptools documentation page:

2023-10-24T11:45:00,109           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-24T11:45:00,110           If you don't want 'moleculekit.share.pdb2pqr.residues' to be distributed and are
2023-10-24T11:45:00,110           already explicitly excluding 'moleculekit.share.pdb2pqr.residues' via
2023-10-24T11:45:00,111           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-24T11:45:00,111           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-24T11:45:00,112           combination with a more fine grained `package-data` configuration.

2023-10-24T11:45:00,113           You can read more about "package data files" on setuptools documentation page:

2023-10-24T11:45:00,114           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-24T11:45:00,115           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-24T11:45:00,116                 even if it does not contain any `.py` files.
2023-10-24T11:45:00,116                 On the other hand, currently there is no concept of package data
2023-10-24T11:45:00,117                 directory, all directories are treated like packages.
2023-10-24T11:45:00,117           ********************************************************************************

2023-10-24T11:45:00,118   !!
2023-10-24T11:45:00,119     check.warn(importable)
2023-10-24T11:45:00,119   /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.tmalign' is absent from the `packages` configuration.
2023-10-24T11:45:00,120   !!

2023-10-24T11:45:00,121           ********************************************************************************
2023-10-24T11:45:00,121           ############################
2023-10-24T11:45:00,122           # Package would be ignored #
2023-10-24T11:45:00,122           ############################
2023-10-24T11:45:00,123           Python recognizes 'moleculekit.tmalign' as an importable package[^1],
2023-10-24T11:45:00,123           but it is absent from setuptools' `packages` configuration.

2023-10-24T11:45:00,124           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-24T11:45:00,125           package, please make sure that 'moleculekit.tmalign' is explicitly added
2023-10-24T11:45:00,125           to the `packages` configuration field.

2023-10-24T11:45:00,126           Alternatively, you can also rely on setuptools' discovery methods
2023-10-24T11:45:00,127           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-24T11:45:00,128           instead of `find_packages(...)`/`find:`).

2023-10-24T11:45:00,128           You can read more about "package discovery" on setuptools documentation page:

2023-10-24T11:45:00,130           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-24T11:45:00,131           If you don't want 'moleculekit.tmalign' to be distributed and are
2023-10-24T11:45:00,131           already explicitly excluding 'moleculekit.tmalign' via
2023-10-24T11:45:00,132           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-24T11:45:00,132           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-24T11:45:00,133           combination with a more fine grained `package-data` configuration.

2023-10-24T11:45:00,133           You can read more about "package data files" on setuptools documentation page:

2023-10-24T11:45:00,134           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-24T11:45:00,136           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-24T11:45:00,136                 even if it does not contain any `.py` files.
2023-10-24T11:45:00,136                 On the other hand, currently there is no concept of package data
2023-10-24T11:45:00,137                 directory, all directories are treated like packages.
2023-10-24T11:45:00,137           ********************************************************************************

2023-10-24T11:45:00,138   !!
2023-10-24T11:45:00,139     check.warn(importable)
2023-10-24T11:45:00,139   /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.tmalign.include' is absent from the `packages` configuration.
2023-10-24T11:45:00,139   !!

2023-10-24T11:45:00,140           ********************************************************************************
2023-10-24T11:45:00,141           ############################
2023-10-24T11:45:00,141           # Package would be ignored #
2023-10-24T11:45:00,142           ############################
2023-10-24T11:45:00,142           Python recognizes 'moleculekit.tmalign.include' as an importable package[^1],
2023-10-24T11:45:00,143           but it is absent from setuptools' `packages` configuration.

2023-10-24T11:45:00,144           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-24T11:45:00,145           package, please make sure that 'moleculekit.tmalign.include' is explicitly added
2023-10-24T11:45:00,145           to the `packages` configuration field.

2023-10-24T11:45:00,146           Alternatively, you can also rely on setuptools' discovery methods
2023-10-24T11:45:00,147           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-24T11:45:00,147           instead of `find_packages(...)`/`find:`).

2023-10-24T11:45:00,148           You can read more about "package discovery" on setuptools documentation page:

2023-10-24T11:45:00,149           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-24T11:45:00,150           If you don't want 'moleculekit.tmalign.include' to be distributed and are
2023-10-24T11:45:00,151           already explicitly excluding 'moleculekit.tmalign.include' via
2023-10-24T11:45:00,151           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-24T11:45:00,152           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-24T11:45:00,153           combination with a more fine grained `package-data` configuration.

2023-10-24T11:45:00,154           You can read more about "package data files" on setuptools documentation page:

2023-10-24T11:45:00,155           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-24T11:45:00,156           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-24T11:45:00,157                 even if it does not contain any `.py` files.
2023-10-24T11:45:00,157                 On the other hand, currently there is no concept of package data
2023-10-24T11:45:00,158                 directory, all directories are treated like packages.
2023-10-24T11:45:00,158           ********************************************************************************

2023-10-24T11:45:00,160   !!
2023-10-24T11:45:00,160     check.warn(importable)
2023-10-24T11:45:00,161   /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.tmalign.src' is absent from the `packages` configuration.
2023-10-24T11:45:00,161   !!

2023-10-24T11:45:00,163           ********************************************************************************
2023-10-24T11:45:00,163           ############################
2023-10-24T11:45:00,164           # Package would be ignored #
2023-10-24T11:45:00,164           ############################
2023-10-24T11:45:00,165           Python recognizes 'moleculekit.tmalign.src' as an importable package[^1],
2023-10-24T11:45:00,165           but it is absent from setuptools' `packages` configuration.

2023-10-24T11:45:00,166           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-24T11:45:00,167           package, please make sure that 'moleculekit.tmalign.src' is explicitly added
2023-10-24T11:45:00,167           to the `packages` configuration field.

2023-10-24T11:45:00,168           Alternatively, you can also rely on setuptools' discovery methods
2023-10-24T11:45:00,169           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-24T11:45:00,169           instead of `find_packages(...)`/`find:`).

2023-10-24T11:45:00,170           You can read more about "package discovery" on setuptools documentation page:

2023-10-24T11:45:00,171           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-24T11:45:00,172           If you don't want 'moleculekit.tmalign.src' to be distributed and are
2023-10-24T11:45:00,173           already explicitly excluding 'moleculekit.tmalign.src' via
2023-10-24T11:45:00,173           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-24T11:45:00,174           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-24T11:45:00,174           combination with a more fine grained `package-data` configuration.

2023-10-24T11:45:00,175           You can read more about "package data files" on setuptools documentation page:

2023-10-24T11:45:00,176           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-24T11:45:00,177           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-24T11:45:00,178                 even if it does not contain any `.py` files.
2023-10-24T11:45:00,179                 On the other hand, currently there is no concept of package data
2023-10-24T11:45:00,179                 directory, all directories are treated like packages.
2023-10-24T11:45:00,180           ********************************************************************************

2023-10-24T11:45:00,181   !!
2023-10-24T11:45:00,181     check.warn(importable)
2023-10-24T11:45:00,182   /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.wrapping' is absent from the `packages` configuration.
2023-10-24T11:45:00,183   !!

2023-10-24T11:45:00,184           ********************************************************************************
2023-10-24T11:45:00,184           ############################
2023-10-24T11:45:00,185           # Package would be ignored #
2023-10-24T11:45:00,185           ############################
2023-10-24T11:45:00,186           Python recognizes 'moleculekit.wrapping' as an importable package[^1],
2023-10-24T11:45:00,186           but it is absent from setuptools' `packages` configuration.

2023-10-24T11:45:00,187           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-24T11:45:00,188           package, please make sure that 'moleculekit.wrapping' is explicitly added
2023-10-24T11:45:00,189           to the `packages` configuration field.

2023-10-24T11:45:00,190           Alternatively, you can also rely on setuptools' discovery methods
2023-10-24T11:45:00,191           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-24T11:45:00,191           instead of `find_packages(...)`/`find:`).

2023-10-24T11:45:00,192           You can read more about "package discovery" on setuptools documentation page:

2023-10-24T11:45:00,193           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-24T11:45:00,194           If you don't want 'moleculekit.wrapping' to be distributed and are
2023-10-24T11:45:00,195           already explicitly excluding 'moleculekit.wrapping' via
2023-10-24T11:45:00,195           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-24T11:45:00,196           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-24T11:45:00,196           combination with a more fine grained `package-data` configuration.

2023-10-24T11:45:00,197           You can read more about "package data files" on setuptools documentation page:

2023-10-24T11:45:00,198           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-24T11:45:00,199           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-24T11:45:00,199                 even if it does not contain any `.py` files.
2023-10-24T11:45:00,200                 On the other hand, currently there is no concept of package data
2023-10-24T11:45:00,200                 directory, all directories are treated like packages.
2023-10-24T11:45:00,201           ********************************************************************************

2023-10-24T11:45:00,202   !!
2023-10-24T11:45:00,202     check.warn(importable)
2023-10-24T11:45:00,202   /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.xtc_utils' is absent from the `packages` configuration.
2023-10-24T11:45:00,203   !!

2023-10-24T11:45:00,204           ********************************************************************************
2023-10-24T11:45:00,205           ############################
2023-10-24T11:45:00,205           # Package would be ignored #
2023-10-24T11:45:00,206           ############################
2023-10-24T11:45:00,206           Python recognizes 'moleculekit.xtc_utils' as an importable package[^1],
2023-10-24T11:45:00,206           but it is absent from setuptools' `packages` configuration.

2023-10-24T11:45:00,207           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-24T11:45:00,208           package, please make sure that 'moleculekit.xtc_utils' is explicitly added
2023-10-24T11:45:00,209           to the `packages` configuration field.

2023-10-24T11:45:00,209           Alternatively, you can also rely on setuptools' discovery methods
2023-10-24T11:45:00,210           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-24T11:45:00,211           instead of `find_packages(...)`/`find:`).

2023-10-24T11:45:00,212           You can read more about "package discovery" on setuptools documentation page:

2023-10-24T11:45:00,213           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-24T11:45:00,214           If you don't want 'moleculekit.xtc_utils' to be distributed and are
2023-10-24T11:45:00,214           already explicitly excluding 'moleculekit.xtc_utils' via
2023-10-24T11:45:00,215           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-24T11:45:00,215           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-24T11:45:00,216           combination with a more fine grained `package-data` configuration.

2023-10-24T11:45:00,217           You can read more about "package data files" on setuptools documentation page:

2023-10-24T11:45:00,218           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-24T11:45:00,220           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-24T11:45:00,220                 even if it does not contain any `.py` files.
2023-10-24T11:45:00,221                 On the other hand, currently there is no concept of package data
2023-10-24T11:45:00,222                 directory, all directories are treated like packages.
2023-10-24T11:45:00,222           ********************************************************************************

2023-10-24T11:45:00,223   !!
2023-10-24T11:45:00,223     check.warn(importable)
2023-10-24T11:45:00,224   /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.xtc_utils.include' is absent from the `packages` configuration.
2023-10-24T11:45:00,224   !!

2023-10-24T11:45:00,225           ********************************************************************************
2023-10-24T11:45:00,226           ############################
2023-10-24T11:45:00,226           # Package would be ignored #
2023-10-24T11:45:00,226           ############################
2023-10-24T11:45:00,227           Python recognizes 'moleculekit.xtc_utils.include' as an importable package[^1],
2023-10-24T11:45:00,227           but it is absent from setuptools' `packages` configuration.

2023-10-24T11:45:00,228           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-24T11:45:00,229           package, please make sure that 'moleculekit.xtc_utils.include' is explicitly added
2023-10-24T11:45:00,229           to the `packages` configuration field.

2023-10-24T11:45:00,230           Alternatively, you can also rely on setuptools' discovery methods
2023-10-24T11:45:00,231           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-24T11:45:00,231           instead of `find_packages(...)`/`find:`).

2023-10-24T11:45:00,232           You can read more about "package discovery" on setuptools documentation page:

2023-10-24T11:45:00,234           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-24T11:45:00,234           If you don't want 'moleculekit.xtc_utils.include' to be distributed and are
2023-10-24T11:45:00,235           already explicitly excluding 'moleculekit.xtc_utils.include' via
2023-10-24T11:45:00,235           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-24T11:45:00,236           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-24T11:45:00,236           combination with a more fine grained `package-data` configuration.

2023-10-24T11:45:00,237           You can read more about "package data files" on setuptools documentation page:

2023-10-24T11:45:00,240           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-24T11:45:00,242           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-24T11:45:00,242                 even if it does not contain any `.py` files.
2023-10-24T11:45:00,243                 On the other hand, currently there is no concept of package data
2023-10-24T11:45:00,244                 directory, all directories are treated like packages.
2023-10-24T11:45:00,244           ********************************************************************************

2023-10-24T11:45:00,245   !!
2023-10-24T11:45:00,246     check.warn(importable)
2023-10-24T11:45:00,247   /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.xtc_utils.src' is absent from the `packages` configuration.
2023-10-24T11:45:00,248   !!

2023-10-24T11:45:00,251           ********************************************************************************
2023-10-24T11:45:00,252           ############################
2023-10-24T11:45:00,252           # Package would be ignored #
2023-10-24T11:45:00,253           ############################
2023-10-24T11:45:00,253           Python recognizes 'moleculekit.xtc_utils.src' as an importable package[^1],
2023-10-24T11:45:00,254           but it is absent from setuptools' `packages` configuration.

2023-10-24T11:45:00,255           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-24T11:45:00,256           package, please make sure that 'moleculekit.xtc_utils.src' is explicitly added
2023-10-24T11:45:00,256           to the `packages` configuration field.

2023-10-24T11:45:00,257           Alternatively, you can also rely on setuptools' discovery methods
2023-10-24T11:45:00,257           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-24T11:45:00,258           instead of `find_packages(...)`/`find:`).

2023-10-24T11:45:00,259           You can read more about "package discovery" on setuptools documentation page:

2023-10-24T11:45:00,260           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-24T11:45:00,260           If you don't want 'moleculekit.xtc_utils.src' to be distributed and are
2023-10-24T11:45:00,261           already explicitly excluding 'moleculekit.xtc_utils.src' via
2023-10-24T11:45:00,261           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-24T11:45:00,262           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-24T11:45:00,262           combination with a more fine grained `package-data` configuration.

2023-10-24T11:45:00,263           You can read more about "package data files" on setuptools documentation page:

2023-10-24T11:45:00,264           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-24T11:45:00,266           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-24T11:45:00,266                 even if it does not contain any `.py` files.
2023-10-24T11:45:00,266                 On the other hand, currently there is no concept of package data
2023-10-24T11:45:00,267                 directory, all directories are treated like packages.
2023-10-24T11:45:00,268           ********************************************************************************

2023-10-24T11:45:00,269   !!
2023-10-24T11:45:00,269     check.warn(importable)
2023-10-24T11:45:00,270   copying moleculekit/logging.ini -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-10-24T11:45:00,271   copying moleculekit/vmd_wrapper -> build/lib.linux-armv7l-cpython-311/moleculekit
2023-10-24T11:45:00,271   creating build/lib.linux-armv7l-cpython-311/moleculekit/atomselect_utils
2023-10-24T11:45:00,272   copying moleculekit/atomselect_utils/atomselect_utils.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/atomselect_utils
2023-10-24T11:45:00,272   copying moleculekit/atomselect_utils/atomselect_utils.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/atomselect_utils
2023-10-24T11:45:00,273   creating build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser_utils
2023-10-24T11:45:00,273   copying moleculekit/bondguesser_utils/bondguesser_utils.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser_utils
2023-10-24T11:45:00,274   copying moleculekit/bondguesser_utils/bondguesser_utils.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser_utils
2023-10-24T11:45:00,274   creating build/lib.linux-armv7l-cpython-311/moleculekit/distance_utils
2023-10-24T11:45:00,275   copying moleculekit/distance_utils/distance_utils.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/distance_utils
2023-10-24T11:45:00,276   copying moleculekit/distance_utils/distance_utils.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/distance_utils
2023-10-24T11:45:00,276   creating build/lib.linux-armv7l-cpython-311/moleculekit/occupancy_utils
2023-10-24T11:45:00,278   copying moleculekit/occupancy_utils/occupancy_utils.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/occupancy_utils
2023-10-24T11:45:00,279   copying moleculekit/occupancy_utils/occupancy_utils.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/occupancy_utils
2023-10-24T11:45:00,279   creating build/lib.linux-armv7l-cpython-311/moleculekit/share
2023-10-24T11:45:00,280   copying moleculekit/share/ALA.cif -> build/lib.linux-armv7l-cpython-311/moleculekit/share
2023-10-24T11:45:00,280   copying moleculekit/share/backbone.cif -> build/lib.linux-armv7l-cpython-311/moleculekit/share
2023-10-24T11:45:00,281   copying moleculekit/share/opm_sequences.json -> build/lib.linux-armv7l-cpython-311/moleculekit/share
2023-10-24T11:45:00,282   creating build/lib.linux-armv7l-cpython-311/moleculekit/share/atomselect
2023-10-24T11:45:00,282   copying moleculekit/share/atomselect/atomselect.json -> build/lib.linux-armv7l-cpython-311/moleculekit/share/atomselect
2023-10-24T11:45:00,282   creating build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr
2023-10-24T11:45:00,283   creating build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,283   copying moleculekit/share/pdb2pqr/residues/.gitkeep -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,284   copying moleculekit/share/pdb2pqr/residues/004.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,284   copying moleculekit/share/pdb2pqr/residues/004.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,285   copying moleculekit/share/pdb2pqr/residues/03Y.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,285   copying moleculekit/share/pdb2pqr/residues/03Y.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,286   copying moleculekit/share/pdb2pqr/residues/0A1.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,286   copying moleculekit/share/pdb2pqr/residues/0A1.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,287   copying moleculekit/share/pdb2pqr/residues/0AF.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,287   copying moleculekit/share/pdb2pqr/residues/0AF.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,288   copying moleculekit/share/pdb2pqr/residues/0BN.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,288   copying moleculekit/share/pdb2pqr/residues/0BN.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,289   copying moleculekit/share/pdb2pqr/residues/1MH.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,289   copying moleculekit/share/pdb2pqr/residues/1MH.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,290   copying moleculekit/share/pdb2pqr/residues/2AS.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,290   copying moleculekit/share/pdb2pqr/residues/2AS.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,291   copying moleculekit/share/pdb2pqr/residues/2GX.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,291   copying moleculekit/share/pdb2pqr/residues/2GX.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,292   copying moleculekit/share/pdb2pqr/residues/2ML.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,293   copying moleculekit/share/pdb2pqr/residues/2ML.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,293   copying moleculekit/share/pdb2pqr/residues/2MR.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,294   copying moleculekit/share/pdb2pqr/residues/2MR.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,294   copying moleculekit/share/pdb2pqr/residues/4IN.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,295   copying moleculekit/share/pdb2pqr/residues/4IN.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,295   copying moleculekit/share/pdb2pqr/residues/4PH.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,296   copying moleculekit/share/pdb2pqr/residues/4PH.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,296   copying moleculekit/share/pdb2pqr/residues/4PQ.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,297   copying moleculekit/share/pdb2pqr/residues/4PQ.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,297   copying moleculekit/share/pdb2pqr/residues/5JP.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,297   copying moleculekit/share/pdb2pqr/residues/5JP.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,298   copying moleculekit/share/pdb2pqr/residues/AA4.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,298   copying moleculekit/share/pdb2pqr/residues/AA4.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,299   copying moleculekit/share/pdb2pqr/residues/ABA.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,299   copying moleculekit/share/pdb2pqr/residues/ABA.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,300   copying moleculekit/share/pdb2pqr/residues/AHP.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,300   copying moleculekit/share/pdb2pqr/residues/AHP.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,301   copying moleculekit/share/pdb2pqr/residues/ALC.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,301   copying moleculekit/share/pdb2pqr/residues/ALC.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,302   copying moleculekit/share/pdb2pqr/residues/ALN.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,302   copying moleculekit/share/pdb2pqr/residues/ALN.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,303   copying moleculekit/share/pdb2pqr/residues/ALY.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,303   copying moleculekit/share/pdb2pqr/residues/ALY.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,304   copying moleculekit/share/pdb2pqr/residues/APD.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,304   copying moleculekit/share/pdb2pqr/residues/APD.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,305   copying moleculekit/share/pdb2pqr/residues/BB8.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,305   copying moleculekit/share/pdb2pqr/residues/BB8.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,306   copying moleculekit/share/pdb2pqr/residues/BCS.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,306   copying moleculekit/share/pdb2pqr/residues/BCS.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,307   copying moleculekit/share/pdb2pqr/residues/BTK.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,307   copying moleculekit/share/pdb2pqr/residues/BTK.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,308   copying moleculekit/share/pdb2pqr/residues/CCS.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,308   copying moleculekit/share/pdb2pqr/residues/CCS.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,309   copying moleculekit/share/pdb2pqr/residues/CGU.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,310   copying moleculekit/share/pdb2pqr/residues/CGU.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,310   copying moleculekit/share/pdb2pqr/residues/CSA.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,310   copying moleculekit/share/pdb2pqr/residues/CSA.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,311   copying moleculekit/share/pdb2pqr/residues/CSO.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,311   copying moleculekit/share/pdb2pqr/residues/CSO.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,312   copying moleculekit/share/pdb2pqr/residues/CSP.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,312   copying moleculekit/share/pdb2pqr/residues/CSP.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,312   copying moleculekit/share/pdb2pqr/residues/CSS.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,313   copying moleculekit/share/pdb2pqr/residues/CSS.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,313   copying moleculekit/share/pdb2pqr/residues/D4P.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,314   copying moleculekit/share/pdb2pqr/residues/D4P.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,314   copying moleculekit/share/pdb2pqr/residues/DA2.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,315   copying moleculekit/share/pdb2pqr/residues/DA2.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,315   copying moleculekit/share/pdb2pqr/residues/DAB.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,316   copying moleculekit/share/pdb2pqr/residues/DAB.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,316   copying moleculekit/share/pdb2pqr/residues/DAH.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,317   copying moleculekit/share/pdb2pqr/residues/DAH.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,317   copying moleculekit/share/pdb2pqr/residues/DPP.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,318   copying moleculekit/share/pdb2pqr/residues/DPP.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,318   copying moleculekit/share/pdb2pqr/residues/ESC.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,318   copying moleculekit/share/pdb2pqr/residues/ESC.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,319   copying moleculekit/share/pdb2pqr/residues/FGL.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,319   copying moleculekit/share/pdb2pqr/residues/FGL.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,320   copying moleculekit/share/pdb2pqr/residues/GHG.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,320   copying moleculekit/share/pdb2pqr/residues/GHG.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,321   copying moleculekit/share/pdb2pqr/residues/GME.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,322   copying moleculekit/share/pdb2pqr/residues/GME.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,322   copying moleculekit/share/pdb2pqr/residues/GNC.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,323   copying moleculekit/share/pdb2pqr/residues/GNC.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,323   copying moleculekit/share/pdb2pqr/residues/HHK.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,323   copying moleculekit/share/pdb2pqr/residues/HHK.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,324   copying moleculekit/share/pdb2pqr/residues/HLU.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,324   copying moleculekit/share/pdb2pqr/residues/HLU.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,325   copying moleculekit/share/pdb2pqr/residues/HLX.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,325   copying moleculekit/share/pdb2pqr/residues/HLX.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,325   copying moleculekit/share/pdb2pqr/residues/HOX.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,326   copying moleculekit/share/pdb2pqr/residues/HOX.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,326   copying moleculekit/share/pdb2pqr/residues/HPE.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,327   copying moleculekit/share/pdb2pqr/residues/HPE.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,327   copying moleculekit/share/pdb2pqr/residues/HQA.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,328   copying moleculekit/share/pdb2pqr/residues/HQA.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,328   copying moleculekit/share/pdb2pqr/residues/HTR.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,329   copying moleculekit/share/pdb2pqr/residues/HTR.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,329   copying moleculekit/share/pdb2pqr/residues/HYP.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,329   copying moleculekit/share/pdb2pqr/residues/HYP.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,330   copying moleculekit/share/pdb2pqr/residues/I2M.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,330   copying moleculekit/share/pdb2pqr/residues/I2M.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,331   copying moleculekit/share/pdb2pqr/residues/IGL.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,331   copying moleculekit/share/pdb2pqr/residues/IGL.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,332   copying moleculekit/share/pdb2pqr/residues/IIL.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,332   copying moleculekit/share/pdb2pqr/residues/IIL.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,334   copying moleculekit/share/pdb2pqr/residues/IML.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,336   copying moleculekit/share/pdb2pqr/residues/IML.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,338   copying moleculekit/share/pdb2pqr/residues/KYN.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,340   copying moleculekit/share/pdb2pqr/residues/KYN.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,342   copying moleculekit/share/pdb2pqr/residues/LME.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,344   copying moleculekit/share/pdb2pqr/residues/LME.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,346   copying moleculekit/share/pdb2pqr/residues/LMQ.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,347   copying moleculekit/share/pdb2pqr/residues/LMQ.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,349   copying moleculekit/share/pdb2pqr/residues/LYZ.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,351   copying moleculekit/share/pdb2pqr/residues/LYZ.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,354   copying moleculekit/share/pdb2pqr/residues/M3L.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,356   copying moleculekit/share/pdb2pqr/residues/M3L.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,358   copying moleculekit/share/pdb2pqr/residues/ME0.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,360   copying moleculekit/share/pdb2pqr/residues/ME0.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,362   copying moleculekit/share/pdb2pqr/residues/MEA.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,364   copying moleculekit/share/pdb2pqr/residues/MEA.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,366   copying moleculekit/share/pdb2pqr/residues/MEN.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,368   copying moleculekit/share/pdb2pqr/residues/MEN.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,370   copying moleculekit/share/pdb2pqr/residues/MEQ.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,372   copying moleculekit/share/pdb2pqr/residues/MEQ.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,374   copying moleculekit/share/pdb2pqr/residues/MLE.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,376   copying moleculekit/share/pdb2pqr/residues/MLE.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,378   copying moleculekit/share/pdb2pqr/residues/MLY.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,380   copying moleculekit/share/pdb2pqr/residues/MLY.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,382   copying moleculekit/share/pdb2pqr/residues/MLZ.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,384   copying moleculekit/share/pdb2pqr/residues/MLZ.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,386   copying moleculekit/share/pdb2pqr/residues/MME.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,388   copying moleculekit/share/pdb2pqr/residues/MME.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,391   copying moleculekit/share/pdb2pqr/residues/MMO.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,393   copying moleculekit/share/pdb2pqr/residues/MMO.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,396   copying moleculekit/share/pdb2pqr/residues/MVA.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,398   copying moleculekit/share/pdb2pqr/residues/MVA.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,401   copying moleculekit/share/pdb2pqr/residues/NAL.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,403   copying moleculekit/share/pdb2pqr/residues/NAL.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,406   copying moleculekit/share/pdb2pqr/residues/NCY.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,409   copying moleculekit/share/pdb2pqr/residues/NCY.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,412   copying moleculekit/share/pdb2pqr/residues/NLE.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,415   copying moleculekit/share/pdb2pqr/residues/NLE.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,418   copying moleculekit/share/pdb2pqr/residues/NVA.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,420   copying moleculekit/share/pdb2pqr/residues/NVA.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,422   copying moleculekit/share/pdb2pqr/residues/NZC.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,425   copying moleculekit/share/pdb2pqr/residues/NZC.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,427   copying moleculekit/share/pdb2pqr/residues/OCY.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,429   copying moleculekit/share/pdb2pqr/residues/OCY.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,432   copying moleculekit/share/pdb2pqr/residues/OMX.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,438   copying moleculekit/share/pdb2pqr/residues/OMX.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,440   copying moleculekit/share/pdb2pqr/residues/ONL.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,442   copying moleculekit/share/pdb2pqr/residues/ONL.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,445   copying moleculekit/share/pdb2pqr/residues/ORM.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,447   copying moleculekit/share/pdb2pqr/residues/ORM.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,450   copying moleculekit/share/pdb2pqr/residues/P1L.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,452   copying moleculekit/share/pdb2pqr/residues/P1L.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,455   copying moleculekit/share/pdb2pqr/residues/PCA.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,457   copying moleculekit/share/pdb2pqr/residues/PCA.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,460   copying moleculekit/share/pdb2pqr/residues/PRK.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,462   copying moleculekit/share/pdb2pqr/residues/PRK.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,465   copying moleculekit/share/pdb2pqr/residues/PTR.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,467   copying moleculekit/share/pdb2pqr/residues/PTR.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,470   copying moleculekit/share/pdb2pqr/residues/SEP.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,472   copying moleculekit/share/pdb2pqr/residues/SEP.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,474   copying moleculekit/share/pdb2pqr/residues/TPO.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,477   copying moleculekit/share/pdb2pqr/residues/TPO.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,479   copying moleculekit/share/pdb2pqr/residues/TRO.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,481   copying moleculekit/share/pdb2pqr/residues/TRO.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,484   copying moleculekit/share/pdb2pqr/residues/TY2.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,486   copying moleculekit/share/pdb2pqr/residues/TY2.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,488   copying moleculekit/share/pdb2pqr/residues/TYQ.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,490   copying moleculekit/share/pdb2pqr/residues/TYQ.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,492   copying moleculekit/share/pdb2pqr/residues/YCM.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,494   copying moleculekit/share/pdb2pqr/residues/YCM.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,496   copying moleculekit/share/pdb2pqr/residues/YNM.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,498   copying moleculekit/share/pdb2pqr/residues/YNM.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2023-10-24T11:45:00,500   creating build/lib.linux-armv7l-cpython-311/moleculekit/tmalign
2023-10-24T11:45:00,501   copying moleculekit/tmalign/tmalign_util.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/tmalign
2023-10-24T11:45:00,520   copying moleculekit/tmalign/tmalign_util.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/tmalign
2023-10-24T11:45:00,522   copying moleculekit/tmalign/tmalignlib.pxd -> build/lib.linux-armv7l-cpython-311/moleculekit/tmalign
2023-10-24T11:45:00,524   creating build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/include
2023-10-24T11:45:00,525   copying moleculekit/tmalign/include/TMAlign.h -> build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/include
2023-10-24T11:45:00,527   creating build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/src
2023-10-24T11:45:00,528   copying moleculekit/tmalign/src/TMAlign.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/src
2023-10-24T11:45:00,534   creating build/lib.linux-armv7l-cpython-311/moleculekit/wrapping
2023-10-24T11:45:00,535   copying moleculekit/wrapping/wrapping.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/wrapping
2023-10-24T11:45:00,555   copying moleculekit/wrapping/wrapping.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/wrapping
2023-10-24T11:45:00,557   creating build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils
2023-10-24T11:45:00,558   copying moleculekit/xtc_utils/xtc.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils
2023-10-24T11:45:00,580   copying moleculekit/xtc_utils/xtc.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils
2023-10-24T11:45:00,582   copying moleculekit/xtc_utils/xtclib.pxd -> build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils
2023-10-24T11:45:00,584   creating build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/include
2023-10-24T11:45:00,585   copying moleculekit/xtc_utils/include/xdrfile.h -> build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/include
2023-10-24T11:45:00,587   copying moleculekit/xtc_utils/include/xdrfile_xtc.h -> build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/include
2023-10-24T11:45:00,589   copying moleculekit/xtc_utils/include/xtc.h -> build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/include
2023-10-24T11:45:00,591   creating build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/src
2023-10-24T11:45:00,592   copying moleculekit/xtc_utils/src/xdrfile.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/src
2023-10-24T11:45:00,595   copying moleculekit/xtc_utils/src/xdrfile_xtc.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/src
2023-10-24T11:45:00,597   copying moleculekit/xtc_utils/src/xtc.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/src
2023-10-24T11:45:00,600   creating build/lib.linux-armv7l-cpython-311/moleculekit/interactions/cationpi
2023-10-24T11:45:00,600   copying moleculekit/interactions/cationpi/cationpi.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/cationpi
2023-10-24T11:45:00,621   copying moleculekit/interactions/cationpi/cationpi.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/cationpi
2023-10-24T11:45:00,623   creating build/lib.linux-armv7l-cpython-311/moleculekit/interactions/hbonds
2023-10-24T11:45:00,624   copying moleculekit/interactions/hbonds/hbonds.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/hbonds
2023-10-24T11:45:00,646   copying moleculekit/interactions/hbonds/hbonds.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/hbonds
2023-10-24T11:45:00,649   creating build/lib.linux-armv7l-cpython-311/moleculekit/interactions/pipi
2023-10-24T11:45:00,650   copying moleculekit/interactions/pipi/pipi.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/pipi
2023-10-24T11:45:00,672   copying moleculekit/interactions/pipi/pipi.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/pipi
2023-10-24T11:45:00,674   creating build/lib.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole
2023-10-24T11:45:00,675   copying moleculekit/interactions/sigmahole/sigmahole.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole
2023-10-24T11:45:00,696   copying moleculekit/interactions/sigmahole/sigmahole.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole
2023-10-24T11:45:00,706   UPDATING build/lib.linux-armv7l-cpython-311/moleculekit/_version.py
2023-10-24T11:45:00,707   set build/lib.linux-armv7l-cpython-311/moleculekit/_version.py to '1.8.5'
2023-10-24T11:45:00,708   running build_ext
2023-10-24T11:45:00,718   building 'moleculekit.interactions.hbonds' extension
2023-10-24T11:45:00,719   creating build/temp.linux-armv7l-cpython-311
2023-10-24T11:45:00,720   creating build/temp.linux-armv7l-cpython-311/moleculekit
2023-10-24T11:45:00,721   creating build/temp.linux-armv7l-cpython-311/moleculekit/interactions
2023-10-24T11:45:00,722   creating build/temp.linux-armv7l-cpython-311/moleculekit/interactions/hbonds
2023-10-24T11:45:00,723   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/interactions/hbonds/hbonds.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/interactions/hbonds/hbonds.o -O3
2023-10-24T11:45:01,057   In file included from /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-10-24T11:45:01,058                    from /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-10-24T11:45:01,058                    from /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-10-24T11:45:01,059                    from moleculekit/interactions/hbonds/hbonds.cpp:1219:
2023-10-24T11:45:01,060   /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-10-24T11:45:01,060      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-10-24T11:45:01,061         |  ^~~~~~~
2023-10-24T11:45:31,550   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/interactions/hbonds/hbonds.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/interactions/hbonds.cpython-311-arm-linux-gnueabihf.so
2023-10-24T11:45:31,835   building 'moleculekit.interactions.pipi' extension
2023-10-24T11:45:31,836   creating build/temp.linux-armv7l-cpython-311/moleculekit/interactions/pipi
2023-10-24T11:45:31,837   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/interactions/pipi/pipi.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/interactions/pipi/pipi.o -O3
2023-10-24T11:45:32,146   In file included from /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-10-24T11:45:32,146                    from /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-10-24T11:45:32,147                    from /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-10-24T11:45:32,148                    from moleculekit/interactions/pipi/pipi.cpp:1219:
2023-10-24T11:45:32,148   /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-10-24T11:45:32,149      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-10-24T11:45:32,150         |  ^~~~~~~
2023-10-24T11:46:04,905   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/interactions/pipi/pipi.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/interactions/pipi.cpython-311-arm-linux-gnueabihf.so
2023-10-24T11:46:05,185   building 'moleculekit.interactions.cationpi' extension
2023-10-24T11:46:05,186   creating build/temp.linux-armv7l-cpython-311/moleculekit/interactions/cationpi
2023-10-24T11:46:05,187   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/interactions/cationpi/cationpi.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/interactions/cationpi/cationpi.o -O3
2023-10-24T11:46:05,497   In file included from /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-10-24T11:46:05,498                    from /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-10-24T11:46:05,499                    from /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-10-24T11:46:05,499                    from moleculekit/interactions/cationpi/cationpi.cpp:1219:
2023-10-24T11:46:05,500   /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-10-24T11:46:05,501      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-10-24T11:46:05,502         |  ^~~~~~~
2023-10-24T11:46:37,905   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/interactions/cationpi/cationpi.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/interactions/cationpi.cpython-311-arm-linux-gnueabihf.so
2023-10-24T11:46:38,190   building 'moleculekit.interactions.sigmahole' extension
2023-10-24T11:46:38,191   creating build/temp.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole
2023-10-24T11:46:38,192   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/interactions/sigmahole/sigmahole.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole/sigmahole.o -O3
2023-10-24T11:46:38,501   In file included from /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-10-24T11:46:38,502                    from /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-10-24T11:46:38,502                    from /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-10-24T11:46:38,503                    from moleculekit/interactions/sigmahole/sigmahole.cpp:1219:
2023-10-24T11:46:38,503   /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-10-24T11:46:38,504      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-10-24T11:46:38,504         |  ^~~~~~~
2023-10-24T11:47:10,565   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole/sigmahole.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole.cpython-311-arm-linux-gnueabihf.so
2023-10-24T11:47:10,849   building 'moleculekit.wrapping' extension
2023-10-24T11:47:10,850   creating build/temp.linux-armv7l-cpython-311/moleculekit/wrapping
2023-10-24T11:47:10,851   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/wrapping/wrapping.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/wrapping/wrapping.o -O3
2023-10-24T11:47:11,168   In file included from /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-10-24T11:47:11,168                    from /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-10-24T11:47:11,169                    from /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-10-24T11:47:11,170                    from moleculekit/wrapping/wrapping.cpp:1219:
2023-10-24T11:47:11,170   /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-10-24T11:47:11,171      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-10-24T11:47:11,172         |  ^~~~~~~
2023-10-24T11:47:39,386   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/wrapping/wrapping.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/wrapping.cpython-311-arm-linux-gnueabihf.so
2023-10-24T11:47:39,574   building 'moleculekit.bondguesser_utils' extension
2023-10-24T11:47:39,575   creating build/temp.linux-armv7l-cpython-311/moleculekit/bondguesser_utils
2023-10-24T11:47:39,576   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/bondguesser_utils/bondguesser_utils.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/bondguesser_utils/bondguesser_utils.o -O3
2023-10-24T11:47:39,883   In file included from /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-10-24T11:47:39,883                    from /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-10-24T11:47:39,884                    from /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-10-24T11:47:39,884                    from moleculekit/bondguesser_utils/bondguesser_utils.cpp:1219:
2023-10-24T11:47:39,885   /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-10-24T11:47:39,885      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-10-24T11:47:39,886         |  ^~~~~~~
2023-10-24T11:47:42,173   moleculekit/bondguesser_utils/bondguesser_utils.cpp: In function ‘PyObject* __pyx_pf_11moleculekit_17bondguesser_utils_make_grid_neighborlist_nonperiodic(PyObject*, __Pyx_memviewslice, __pyx_t_11moleculekit_17bondguesser_utils_UINT32_t, __pyx_t_11moleculekit_17bondguesser_utils_UINT32_t, __pyx_t_11moleculekit_17bondguesser_utils_UINT32_t)’:
2023-10-24T11:47:42,173   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19759:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} [-Wsign-compare]
2023-10-24T11:47:42,174   19759 |   for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) {
2023-10-24T11:47:42,174         |                       ~~~~~~~~~~^~~~~~~~~~~
2023-10-24T11:47:42,175   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19771:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} [-Wsign-compare]
2023-10-24T11:47:42,176   19771 |     for (__pyx_t_6 = 0; __pyx_t_6 < __pyx_t_5; __pyx_t_6+=1) {
2023-10-24T11:47:42,176         |                         ~~~~~~~~~~^~~~~~~~~~~
2023-10-24T11:47:42,177   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19783:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} [-Wsign-compare]
2023-10-24T11:47:42,178   19783 |       for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_8; __pyx_t_9+=1) {
2023-10-24T11:47:42,178         |                           ~~~~~~~~~~^~~~~~~~~~~
2023-10-24T11:47:42,179   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19822:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-10-24T11:47:42,180   19822 |         __pyx_t_12 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-10-24T11:47:42,180         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-10-24T11:47:42,181   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19861:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-10-24T11:47:42,182   19861 |         __pyx_t_12 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2023-10-24T11:47:42,182         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-10-24T11:47:42,183   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19900:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-10-24T11:47:42,184   19900 |         __pyx_t_12 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-10-24T11:47:42,184         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-10-24T11:47:42,185   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19939:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-10-24T11:47:42,185   19939 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-10-24T11:47:42,186         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-10-24T11:47:42,186   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19945:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-10-24T11:47:42,187   19945 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2023-10-24T11:47:42,187         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-10-24T11:47:42,188   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19986:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-10-24T11:47:42,188   19986 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-10-24T11:47:42,189         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-10-24T11:47:42,189   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19992:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-10-24T11:47:42,190   19992 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-10-24T11:47:42,191         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-10-24T11:47:42,191   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20033:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-10-24T11:47:42,192   20033 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2023-10-24T11:47:42,193         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-10-24T11:47:42,193   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20039:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-10-24T11:47:42,194   20039 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-10-24T11:47:42,195         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-10-24T11:47:42,195   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20080:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-10-24T11:47:42,196   20080 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-10-24T11:47:42,197         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-10-24T11:47:42,197   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20133:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-10-24T11:47:42,198   20133 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-10-24T11:47:42,199         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-10-24T11:47:42,199   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20180:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-10-24T11:47:42,200   20180 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-10-24T11:47:42,201         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-10-24T11:47:42,201   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20221:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-10-24T11:47:42,202   20221 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-10-24T11:47:42,202         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-10-24T11:47:42,203   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20227:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-10-24T11:47:42,203   20227 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2023-10-24T11:47:42,204         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-10-24T11:47:42,204   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20233:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-10-24T11:47:42,205   20233 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-10-24T11:47:42,205         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-10-24T11:47:42,206   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20280:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-10-24T11:47:42,206   20280 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2023-10-24T11:47:42,207         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-10-24T11:47:42,207   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20286:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-10-24T11:47:42,208   20286 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-10-24T11:47:42,208         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-10-24T11:47:42,209   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20327:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-10-24T11:47:42,210   20327 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-10-24T11:47:42,211         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-10-24T11:47:42,211   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20339:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-10-24T11:47:42,212   20339 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-10-24T11:47:42,213         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-10-24T11:47:42,213   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20392:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-10-24T11:47:42,214   20392 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-10-24T11:47:42,215         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-10-24T11:47:42,237   moleculekit/bondguesser_utils/bondguesser_utils.cpp: In function ‘PyObject* __pyx_pf_11moleculekit_17bondguesser_utils_2grid_bonds(PyObject*, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, float, int, __Pyx_memviewslice, __Pyx_memviewslice)’:
2023-10-24T11:47:42,238   moleculekit/bondguesser_utils/bondguesser_utils.cpp:21014:37: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-24T11:47:42,239   21014 |       __pyx_t_6 = (__pyx_v_boxneigh == __pyx_v_n_boxes);
2023-10-24T11:47:42,240         |                    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
2023-10-24T11:47:42,241   moleculekit/bondguesser_utils/bondguesser_utils.cpp:21051:37: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-24T11:47:42,241   21051 |       __pyx_t_6 = (__pyx_v_boxneigh == __pyx_v_boxidx);
2023-10-24T11:47:42,242         |                    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2023-10-24T11:48:08,668   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/bondguesser_utils/bondguesser_utils.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser_utils.cpython-311-arm-linux-gnueabihf.so
2023-10-24T11:48:08,938   building 'moleculekit.atomselect_utils' extension
2023-10-24T11:48:08,939   creating build/temp.linux-armv7l-cpython-311/moleculekit/atomselect_utils
2023-10-24T11:48:08,940   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/atomselect_utils/atomselect_utils.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/atomselect_utils/atomselect_utils.o -O3
2023-10-24T11:48:09,260   In file included from /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-10-24T11:48:09,260                    from /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-10-24T11:48:09,261                    from /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-10-24T11:48:09,262                    from moleculekit/atomselect_utils/atomselect_utils.cpp:1236:
2023-10-24T11:48:09,262   /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-10-24T11:48:09,263      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-10-24T11:48:09,263         |  ^~~~~~~
2023-10-24T11:48:11,805   moleculekit/atomselect_utils/atomselect_utils.cpp: In function ‘bool __pyx_f_11moleculekit_16atomselect_utils__find_connected_subfragment(int, int, const char*, const char*, const char*, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, std::vector<std::__cxx11::basic_string<char> >&, __Pyx_memviewslice, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&)’:
2023-10-24T11:48:11,806   moleculekit/atomselect_utils/atomselect_utils.cpp:23714:161: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_16atomselect_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-24T11:48:11,806   23714 |       __pyx_t_3 = ((*((__pyx_t_11moleculekit_16atomselect_utils_UINT32_t *) ( /* dim=0 */ (__pyx_v_uq_resid.data + __pyx_t_2 * __pyx_v_uq_resid.strides[0]) ))) != __pyx_v_resnum);
2023-10-24T11:48:11,807         |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2023-10-24T11:48:11,812   moleculekit/atomselect_utils/atomselect_utils.cpp: In function ‘bool __pyx_f_11moleculekit_16atomselect_utils__find_subfragments(int, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, std::vector<std::__cxx11::basic_string<char> >&, __Pyx_memviewslice, std::vector<std::vector<int> >&)’:
2023-10-24T11:48:11,813   moleculekit/atomselect_utils/atomselect_utils.cpp:23966:163: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_16atomselect_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-24T11:48:11,814   23966 |         __pyx_t_6 = ((*((__pyx_t_11moleculekit_16atomselect_utils_UINT32_t *) ( /* dim=0 */ (__pyx_v_uq_resid.data + __pyx_t_5 * __pyx_v_uq_resid.strides[0]) ))) != __pyx_v_i);
2023-10-24T11:48:11,815         |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-10-24T11:48:11,820   moleculekit/atomselect_utils/atomselect_utils.cpp: In function ‘bool __pyx_f_11moleculekit_16atomselect_utils__find_subfragments_topologically(int, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, std::vector<std::__cxx11::basic_string<char> >&, __Pyx_memviewslice, std::vector<std::vector<int> >&)’:
2023-10-24T11:48:11,821   moleculekit/atomselect_utils/atomselect_utils.cpp:24233:163: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_16atomselect_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-10-24T11:48:11,821   24233 |         __pyx_t_6 = ((*((__pyx_t_11moleculekit_16atomselect_utils_UINT32_t *) ( /* dim=0 */ (__pyx_v_uq_resid.data + __pyx_t_5 * __pyx_v_uq_resid.strides[0]) ))) != __pyx_v_i);
2023-10-24T11:48:11,822         |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-10-24T11:48:46,373   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/atomselect_utils/atomselect_utils.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/atomselect_utils.cpython-311-arm-linux-gnueabihf.so
2023-10-24T11:48:46,670   building 'moleculekit.distance_utils' extension
2023-10-24T11:48:46,671   creating build/temp.linux-armv7l-cpython-311/moleculekit/distance_utils
2023-10-24T11:48:46,672   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/distance_utils/distance_utils.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/distance_utils/distance_utils.o -O3
2023-10-24T11:48:47,026   In file included from /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-10-24T11:48:47,026                    from /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-10-24T11:48:47,027                    from /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-10-24T11:48:47,028                    from moleculekit/distance_utils/distance_utils.cpp:1219:
2023-10-24T11:48:47,028   /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-10-24T11:48:47,029      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-10-24T11:48:47,029         |  ^~~~~~~
2023-10-24T11:49:23,821   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/distance_utils/distance_utils.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/distance_utils.cpython-311-arm-linux-gnueabihf.so
2023-10-24T11:49:24,115   building 'moleculekit.occupancy_utils' extension
2023-10-24T11:49:24,115   creating build/temp.linux-armv7l-cpython-311/moleculekit/occupancy_utils
2023-10-24T11:49:24,116   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/occupancy_utils/occupancy_utils.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/occupancy_utils/occupancy_utils.o -O3
2023-10-24T11:49:24,423   In file included from /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-10-24T11:49:24,424                    from /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-10-24T11:49:24,424                    from /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-10-24T11:49:24,425                    from moleculekit/occupancy_utils/occupancy_utils.cpp:1219:
2023-10-24T11:49:24,425   /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-10-24T11:49:24,426      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-10-24T11:49:24,426         |  ^~~~~~~
2023-10-24T11:49:51,623   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/occupancy_utils/occupancy_utils.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/occupancy_utils.cpython-311-arm-linux-gnueabihf.so
2023-10-24T11:49:51,815   building 'moleculekit.xtc' extension
2023-10-24T11:49:51,815   creating build/temp.linux-armv7l-cpython-311/moleculekit/xtc_utils
2023-10-24T11:49:51,816   creating build/temp.linux-armv7l-cpython-311/moleculekit/xtc_utils/src
2023-10-24T11:49:51,817   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/xtc_utils/src/xdrfile.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/xtc_utils/src/xdrfile.o
2023-10-24T11:49:52,461   moleculekit/xtc_utils/src/xdrfile.cpp:66:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-10-24T11:49:52,462      66 |         "OK",
2023-10-24T11:49:52,463         |         ^~~~
2023-10-24T11:49:52,464   moleculekit/xtc_utils/src/xdrfile.cpp:67:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-10-24T11:49:52,464      67 |         "Header",
2023-10-24T11:49:52,465         |         ^~~~~~~~
2023-10-24T11:49:52,466   moleculekit/xtc_utils/src/xdrfile.cpp:68:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-10-24T11:49:52,466      68 |         "String",
2023-10-24T11:49:52,467         |         ^~~~~~~~
2023-10-24T11:49:52,468   moleculekit/xtc_utils/src/xdrfile.cpp:69:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-10-24T11:49:52,468      69 |         "Double",
2023-10-24T11:49:52,469         |         ^~~~~~~~
2023-10-24T11:49:52,470   moleculekit/xtc_utils/src/xdrfile.cpp:70:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-10-24T11:49:52,471      70 |         "Integer",
2023-10-24T11:49:52,471         |         ^~~~~~~~~
2023-10-24T11:49:52,472   moleculekit/xtc_utils/src/xdrfile.cpp:71:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-10-24T11:49:52,473      71 |         "Float",
2023-10-24T11:49:52,474         |         ^~~~~~~
2023-10-24T11:49:52,474   moleculekit/xtc_utils/src/xdrfile.cpp:72:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-10-24T11:49:52,475      72 |         "Unsigned integer",
2023-10-24T11:49:52,476         |         ^~~~~~~~~~~~~~~~~~
2023-10-24T11:49:52,476   moleculekit/xtc_utils/src/xdrfile.cpp:73:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-10-24T11:49:52,477      73 |         "Compressed 3D coordinate",
2023-10-24T11:49:52,478         |         ^~~~~~~~~~~~~~~~~~~~~~~~~~
2023-10-24T11:49:52,478   moleculekit/xtc_utils/src/xdrfile.cpp:74:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-10-24T11:49:52,479      74 |         "Closing file",
2023-10-24T11:49:52,479         |         ^~~~~~~~~~~~~~
2023-10-24T11:49:52,480   moleculekit/xtc_utils/src/xdrfile.cpp:75:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-10-24T11:49:52,480      75 |         "Magic number",
2023-10-24T11:49:52,481         |         ^~~~~~~~~~~~~~
2023-10-24T11:49:52,482   moleculekit/xtc_utils/src/xdrfile.cpp:76:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-10-24T11:49:52,482      76 |         "Not enough memory",
2023-10-24T11:49:52,483         |         ^~~~~~~~~~~~~~~~~~~
2023-10-24T11:49:52,483   moleculekit/xtc_utils/src/xdrfile.cpp:77:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-10-24T11:49:52,484      77 |         "End of file",
2023-10-24T11:49:52,484         |         ^~~~~~~~~~~~~
2023-10-24T11:49:52,485   moleculekit/xtc_utils/src/xdrfile.cpp:78:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-10-24T11:49:52,486      78 |         "File not found"
2023-10-24T11:49:52,486         |         ^~~~~~~~~~~~~~~~
2023-10-24T11:49:52,487   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int sizeofint(int)’:
2023-10-24T11:49:52,487   moleculekit/xtc_utils/src/xdrfile.cpp:459:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-10-24T11:49:52,488     459 |     while (size >= num && num_of_bits < 32)
2023-10-24T11:49:52,489         |            ~~~~~^~~~~~
2023-10-24T11:49:52,490   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int sizeofints(int, unsigned int*)’:
2023-10-24T11:49:52,490   moleculekit/xtc_utils/src/xdrfile.cpp:505:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-10-24T11:49:52,491     505 |     while (bytes[num_of_bytes] >= num)
2023-10-24T11:49:52,492         |            ~~~~~~~~~~~~~~~~~~~~^~~~~~
2023-10-24T11:49:52,493   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘void encodeints(int*, int, int, unsigned int*, unsigned int*)’:
2023-10-24T11:49:52,493   moleculekit/xtc_utils/src/xdrfile.cpp:614:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-10-24T11:49:52,494     614 |     if (num_of_bits >= num_of_bytes * 8)
2023-10-24T11:49:52,495         |         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
2023-10-24T11:49:52,495   moleculekit/xtc_utils/src/xdrfile.cpp:616:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-10-24T11:49:52,496     616 |                 for (i = 0; i < num_of_bytes; i++)
2023-10-24T11:49:52,497         |                             ~~^~~~~~~~~~~~~~
2023-10-24T11:49:52,497   moleculekit/xtc_utils/src/xdrfile.cpp:624:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-10-24T11:49:52,498     624 |                 for (i = 0; i < num_of_bytes-1; i++)
2023-10-24T11:49:52,499         |                             ~~^~~~~~~~~~~~~~~~
2023-10-24T11:49:52,499   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int decodebits(int*, int)’:
2023-10-24T11:49:52,500   moleculekit/xtc_utils/src/xdrfile.cpp:664:30: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-10-24T11:49:52,501     664 |                 if (lastbits < num_of_bits)
2023-10-24T11:49:52,502         |                     ~~~~~~~~~^~~~~~~~~~~~~
2023-10-24T11:49:52,502   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_decompress_coord_float(float*, int*, float*, XDRFILE*)’:
2023-10-24T11:49:52,503   moleculekit/xtc_utils/src/xdrfile.cpp:785:17: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-10-24T11:49:52,504     785 |         if(size3>xfp->buf1size)
2023-10-24T11:49:52,504         |            ~~~~~^~~~~~~~~~~~~~
2023-10-24T11:49:52,505   moleculekit/xtc_utils/src/xdrfile.cpp:842:26: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-10-24T11:49:52,505     842 |         maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-10-24T11:49:52,506         |                          ^
2023-10-24T11:49:52,506   moleculekit/xtc_utils/src/xdrfile.cpp:932:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-10-24T11:49:52,507     932 |                                 if(countmjh >= size3 ) { return -1; }
2023-10-24T11:49:52,507         |                                    ~~~~~~~~~^~~~~~~~
2023-10-24T11:49:52,508   moleculekit/xtc_utils/src/xdrfile.cpp:935:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-10-24T11:49:52,508     935 |                                 if(countmjh >= size3 ) { return -1; }
2023-10-24T11:49:52,509         |                                    ~~~~~~~~~^~~~~~~~
2023-10-24T11:49:52,510   moleculekit/xtc_utils/src/xdrfile.cpp:938:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-10-24T11:49:52,510     938 |                                 if(countmjh >= size3 ) { return -1; }
2023-10-24T11:49:52,511         |                                    ~~~~~~~~~^~~~~~~~
2023-10-24T11:49:52,512   moleculekit/xtc_utils/src/xdrfile.cpp:945:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-10-24T11:49:52,513     945 |                                 if(countmjh >= size3 ) { return -1; }
2023-10-24T11:49:52,513         |                                    ~~~~~~~~~^~~~~~~~
2023-10-24T11:49:52,514   moleculekit/xtc_utils/src/xdrfile.cpp:948:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-10-24T11:49:52,515     948 |                                 if(countmjh >= size3 ) { return -1; }
2023-10-24T11:49:52,516         |                                    ~~~~~~~~~^~~~~~~~
2023-10-24T11:49:52,516   moleculekit/xtc_utils/src/xdrfile.cpp:951:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-10-24T11:49:52,517     951 |                                 if(countmjh >= size3 ) { return -1; }
2023-10-24T11:49:52,518         |                                    ~~~~~~~~~^~~~~~~~
2023-10-24T11:49:52,518   moleculekit/xtc_utils/src/xdrfile.cpp:756:24: warning: variable ‘minidx’ set but not used [-Wunused-but-set-variable]
2023-10-24T11:49:52,519     756 |         int smallidx,  minidx, maxidx;
2023-10-24T11:49:52,520         |                        ^~~~~~
2023-10-24T11:49:52,521   moleculekit/xtc_utils/src/xdrfile.cpp:759:32: warning: variable ‘larger’ set but not used [-Wunused-but-set-variable]
2023-10-24T11:49:52,521     759 |         int smallnum, smaller, larger, i, is_smaller, run;
2023-10-24T11:49:52,522         |                                ^~~~~~
2023-10-24T11:49:52,523   moleculekit/xtc_utils/src/xdrfile.cpp:763:13: warning: unused variable ‘errval’ [-Wunused-variable]
2023-10-24T11:49:52,524     763 |         int errval=1;
2023-10-24T11:49:52,524         |             ^~~~~~
2023-10-24T11:49:52,525   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_compress_coord_float(float*, int, float, XDRFILE*)’:
2023-10-24T11:49:52,525   moleculekit/xtc_utils/src/xdrfile.cpp:1011:17: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-10-24T11:49:52,526    1011 |         if(size3>xfp->buf1size)
2023-10-24T11:49:52,526         |            ~~~~~^~~~~~~~~~~~~~
2023-10-24T11:49:52,527   moleculekit/xtc_utils/src/xdrfile.cpp:1068:41: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-10-24T11:49:52,527    1068 |                 countmjh++; if( countmjh> size3) { return -1; }
2023-10-24T11:49:52,528         |                                 ~~~~~~~~^~~~~~~
2023-10-24T11:49:52,528   moleculekit/xtc_utils/src/xdrfile.cpp:1084:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-10-24T11:49:52,529    1084 |           countmjh++; if( countmjh> size3) { return -1; }
2023-10-24T11:49:52,529         |                           ~~~~~~~~^~~~~~~
2023-10-24T11:49:52,530   moleculekit/xtc_utils/src/xdrfile.cpp:1098:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-10-24T11:49:52,530    1098 |           countmjh++; if( countmjh> size3) { return -1; }
2023-10-24T11:49:52,531         |                           ~~~~~~~~^~~~~~~
2023-10-24T11:49:52,532   moleculekit/xtc_utils/src/xdrfile.cpp:1137:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-10-24T11:49:52,532    1137 |         while (smallidx < LASTIDX && magicints[smallidx] < mindiff)
2023-10-24T11:49:52,533         |                         ^
2023-10-24T11:49:52,534   moleculekit/xtc_utils/src/xdrfile.cpp:1143:26: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-10-24T11:49:52,534    1143 |         maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-10-24T11:49:52,535         |                          ^
2023-10-24T11:49:52,536   moleculekit/xtc_utils/src/xdrfile.cpp:1275:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-10-24T11:49:52,537    1275 |         if(tmp==(unsigned int)buf2[0])
2023-10-24T11:49:52,537         |            ~~~^~~~~~~~~~~~~~~~~~~~~~~
2023-10-24T11:49:52,538   moleculekit/xtc_utils/src/xdrfile.cpp:1001:13: warning: variable ‘errval’ set but not used [-Wunused-but-set-variable]
2023-10-24T11:49:52,539    1001 |         int errval;
2023-10-24T11:49:52,539         |             ^~~~~~
2023-10-24T11:49:52,540   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_decompress_coord_double(double*, int*, double*, XDRFILE*)’:
2023-10-24T11:49:52,541   moleculekit/xtc_utils/src/xdrfile.cpp:1316:17: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-10-24T11:49:52,541    1316 |         if(size3>xfp->buf1size)
2023-10-24T11:49:52,542         |            ~~~~~^~~~~~~~~~~~~~
2023-10-24T11:49:52,543   moleculekit/xtc_utils/src/xdrfile.cpp:1377:26: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-10-24T11:49:52,543    1377 |         maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-10-24T11:49:52,544         |                          ^
2023-10-24T11:49:52,545   moleculekit/xtc_utils/src/xdrfile.cpp:1289:32: warning: variable ‘minidx’ set but not used [-Wunused-but-set-variable]
2023-10-24T11:49:52,545    1289 |         int smallidx,  maxidx, minidx;
2023-10-24T11:49:52,546         |                                ^~~~~~
2023-10-24T11:49:52,547   moleculekit/xtc_utils/src/xdrfile.cpp:1292:32: warning: variable ‘larger’ set but not used [-Wunused-but-set-variable]
2023-10-24T11:49:52,548    1292 |         int smallnum, smaller, larger, i, is_smaller, run;
2023-10-24T11:49:52,548         |                                ^~~~~~
2023-10-24T11:49:52,549   moleculekit/xtc_utils/src/xdrfile.cpp:1297:13: warning: unused variable ‘errval’ [-Wunused-variable]
2023-10-24T11:49:52,549    1297 |         int errval=1;
2023-10-24T11:49:52,550         |             ^~~~~~
2023-10-24T11:49:52,551   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_compress_coord_double(double*, int, double, XDRFILE*)’:
2023-10-24T11:49:52,551   moleculekit/xtc_utils/src/xdrfile.cpp:1513:17: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-10-24T11:49:52,552    1513 |         if(size3>xfp->buf1size) {
2023-10-24T11:49:52,552         |            ~~~~~^~~~~~~~~~~~~~
2023-10-24T11:49:52,553   moleculekit/xtc_utils/src/xdrfile.cpp:1628:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-10-24T11:49:52,554    1628 |         while (smallidx < LASTIDX && magicints[smallidx] < mindiff) {
2023-10-24T11:49:52,554         |                         ^
2023-10-24T11:49:52,555   moleculekit/xtc_utils/src/xdrfile.cpp:1633:26: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-10-24T11:49:52,555    1633 |         maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-10-24T11:49:52,556         |                          ^
2023-10-24T11:49:52,556   moleculekit/xtc_utils/src/xdrfile.cpp:1743:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-10-24T11:49:52,557    1743 |         if(tmp==(unsigned int)buf2[0])
2023-10-24T11:49:52,558         |            ~~~^~~~~~~~~~~~~~~~~~~~~~~
2023-10-24T11:49:52,559   moleculekit/xtc_utils/src/xdrfile.cpp:1504:13: warning: variable ‘errval’ set but not used [-Wunused-but-set-variable]
2023-10-24T11:49:52,560    1504 |         int errval=1;
2023-10-24T11:49:52,560         |             ^~~~~~
2023-10-24T11:49:55,380   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/xtc_utils/src/xdrfile_xtc.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/xtc_utils/src/xdrfile_xtc.o
2023-10-24T11:49:55,646   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/xtc_utils/src/xtc.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/xtc_utils/src/xtc.o
2023-10-24T11:49:56,457   moleculekit/xtc_utils/src/xtc.cpp: In function ‘void xtc_read_new(char*, float*, float*, float*, int*, int, int)’:
2023-10-24T11:49:56,457   moleculekit/xtc_utils/src/xtc.cpp:207:13: warning: unused variable ‘nf3’ [-Wunused-variable]
2023-10-24T11:49:56,458     207 |         int nf3 = nframes * 3; // Precalculate 3 * nframes for the coordinate lookup macro
2023-10-24T11:49:56,459         |             ^~~
2023-10-24T11:49:56,466   moleculekit/xtc_utils/src/xtc.cpp: In function ‘int xtc_write(char*, int, int, int*, float*, float*, float*)’:
2023-10-24T11:49:56,467   moleculekit/xtc_utils/src/xtc.cpp:418:13: warning: unused variable ‘nf3’ [-Wunused-variable]
2023-10-24T11:49:56,467     418 |         int nf3 = nframes * 3;
2023-10-24T11:49:56,468         |             ^~~
2023-10-24T11:49:56,473   moleculekit/xtc_utils/src/xtc.cpp: In function ‘void xtc_read_frame(char*, float*, float*, float*, int*, int, int, int, int)’:
2023-10-24T11:49:56,474   moleculekit/xtc_utils/src/xtc.cpp:491:13: warning: unused variable ‘reading_index’ [-Wunused-variable]
2023-10-24T11:49:56,474     491 |         int reading_index = 0;
2023-10-24T11:49:56,475         |             ^~~~~~~~~~~~~
2023-10-24T11:49:56,475   moleculekit/xtc_utils/src/xtc.cpp:492:13: warning: unused variable ‘writing_index’ [-Wunused-variable]
2023-10-24T11:49:56,476     492 |         int writing_index = 0;
2023-10-24T11:49:56,477         |             ^~~~~~~~~~~~~
2023-10-24T11:49:57,353   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/xtc_utils/xtc.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/xtc_utils/xtc.o
2023-10-24T11:49:57,671   In file included from /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-10-24T11:49:57,672                    from /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-10-24T11:49:57,672                    from /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-10-24T11:49:57,673                    from moleculekit/xtc_utils/xtc.cpp:1223:
2023-10-24T11:49:57,673   /tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-10-24T11:49:57,674      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-10-24T11:49:57,674         |  ^~~~~~~
2023-10-24T11:50:21,606   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/xtc_utils/src/xdrfile.o build/temp.linux-armv7l-cpython-311/moleculekit/xtc_utils/src/xdrfile_xtc.o build/temp.linux-armv7l-cpython-311/moleculekit/xtc_utils/src/xtc.o build/temp.linux-armv7l-cpython-311/moleculekit/xtc_utils/xtc.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/xtc.cpython-311-arm-linux-gnueabihf.so
2023-10-24T11:50:21,889   building 'moleculekit.tmalign' extension
2023-10-24T11:50:21,890   creating build/temp.linux-armv7l-cpython-311/moleculekit/tmalign
2023-10-24T11:50:21,891   creating build/temp.linux-armv7l-cpython-311/moleculekit/tmalign/src
2023-10-24T11:50:21,892   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/tmalign -Imoleculekit/tmalign/include/ -Imoleculekit/tmalign/ -I/tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/tmalign/src/TMAlign.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/tmalign/src/TMAlign.o -w
2023-10-24T11:50:55,661   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/tmalign -Imoleculekit/tmalign/include/ -Imoleculekit/tmalign/ -I/tmp/pip-build-env-nd_a50iv/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/tmalign/tmalign_util.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/tmalign/tmalign_util.o -w
2023-10-24T11:51:18,182   In file included from /usr/include/c++/12/vector:70,
2023-10-24T11:51:18,182                    from moleculekit/tmalign/tmalign_util.cpp:1234:
2023-10-24T11:51:18,183   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]’:
2023-10-24T11:51:18,184   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2023-10-24T11:51:18,185     439 |       vector<_Tp, _Alloc>::
2023-10-24T11:51:18,185         |       ^~~~~~~~~~~~~~~~~~~
2023-10-24T11:51:18,985   In file included from /usr/include/c++/12/vector:64:
2023-10-24T11:51:18,986   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2023-10-24T11:51:18,987       inlined from ‘PyObject* __pyx_pf_11moleculekit_7tmalign_tmalign(PyObject*, __Pyx_memviewslice, __Pyx_memviewslice, std::string, std::string)’ at moleculekit/tmalign/tmalign_util.cpp:20737:32,
2023-10-24T11:51:18,987       inlined from ‘PyObject* __pyx_pw_11moleculekit_7tmalign_1tmalign(PyObject*, PyObject* const*, Py_ssize_t, PyObject*)’ at moleculekit/tmalign/tmalign_util.cpp:20222:52:
2023-10-24T11:51:18,988   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2023-10-24T11:51:18,989    1287 |           _M_realloc_insert(end(), __x);
2023-10-24T11:51:18,989         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-10-24T11:51:18,990   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2023-10-24T11:51:18,990       inlined from ‘PyObject* __pyx_pf_11moleculekit_7tmalign_tmalign(PyObject*, __Pyx_memviewslice, __Pyx_memviewslice, std::string, std::string)’ at moleculekit/tmalign/tmalign_util.cpp:20751:33,
2023-10-24T11:51:18,991       inlined from ‘PyObject* __pyx_pw_11moleculekit_7tmalign_1tmalign(PyObject*, PyObject* const*, Py_ssize_t, PyObject*)’ at moleculekit/tmalign/tmalign_util.cpp:20222:52:
2023-10-24T11:51:18,992   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2023-10-24T11:51:18,993    1287 |           _M_realloc_insert(end(), __x);
2023-10-24T11:51:18,993         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-10-24T11:51:18,994   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2023-10-24T11:51:18,995       inlined from ‘PyObject* __pyx_pf_11moleculekit_7tmalign_tmalign(PyObject*, __Pyx_memviewslice, __Pyx_memviewslice, std::string, std::string)’ at moleculekit/tmalign/tmalign_util.cpp:20836:34,
2023-10-24T11:51:18,995       inlined from ‘PyObject* __pyx_pw_11moleculekit_7tmalign_1tmalign(PyObject*, PyObject* const*, Py_ssize_t, PyObject*)’ at moleculekit/tmalign/tmalign_util.cpp:20222:52:
2023-10-24T11:51:18,996   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2023-10-24T11:51:18,997    1287 |           _M_realloc_insert(end(), __x);
2023-10-24T11:51:18,997         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-10-24T11:51:21,331   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/tmalign/src/TMAlign.o build/temp.linux-armv7l-cpython-311/moleculekit/tmalign/tmalign_util.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/tmalign.cpython-311-arm-linux-gnueabihf.so
2023-10-24T11:51:21,719   UPDATING build/lib.linux-armv7l-cpython-311/moleculekit/_version.py
2023-10-24T11:51:21,719   set build/lib.linux-armv7l-cpython-311/moleculekit/_version.py to '1.8.5'
2023-10-24T11:51:21,720   installing to build/bdist.linux-armv7l/wheel
2023-10-24T11:51:21,721   running install
2023-10-24T11:51:21,743   running install_lib
2023-10-24T11:51:21,749   creating build/bdist.linux-armv7l
2023-10-24T11:51:21,750   creating build/bdist.linux-armv7l/wheel
2023-10-24T11:51:21,752   creating build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:21,753   copying build/lib.linux-armv7l-cpython-311/moleculekit/vmdviewer.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:21,756   copying build/lib.linux-armv7l-cpython-311/moleculekit/distance.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:21,758   copying build/lib.linux-armv7l-cpython-311/moleculekit/align.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:21,760   copying build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser_utils.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:21,779   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:21,799   creating build/bdist.linux-armv7l/wheel/moleculekit/distance_utils
2023-10-24T11:51:21,800   copying build/lib.linux-armv7l-cpython-311/moleculekit/distance_utils/distance_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/distance_utils
2023-10-24T11:51:21,802   copying build/lib.linux-armv7l-cpython-311/moleculekit/distance_utils/distance_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/distance_utils
2023-10-24T11:51:21,823   copying build/lib.linux-armv7l-cpython-311/moleculekit/readers.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:21,827   copying build/lib.linux-armv7l-cpython-311/moleculekit/logging.ini -> build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:21,829   copying build/lib.linux-armv7l-cpython-311/moleculekit/distance_utils.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:21,855   creating build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-10-24T11:51:21,856   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/voxeldescriptors.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-10-24T11:51:21,858   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/hhblitsprofile.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-10-24T11:51:21,860   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/docking.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-10-24T11:51:21,862   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/graphalignment.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-10-24T11:51:21,865   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/detect.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-10-24T11:51:21,867   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/crystalpacking.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-10-24T11:51:21,870   creating build/bdist.linux-armv7l/wheel/moleculekit/tools/obabel_tools
2023-10-24T11:51:21,871   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/obabel_tools/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools/obabel_tools
2023-10-24T11:51:21,873   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/obabel_tools/obabel_cli.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools/obabel_tools
2023-10-24T11:51:21,875   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/preparation_customres.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-10-24T11:51:21,878   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/preparation.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-10-24T11:51:21,881   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/autosegment.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-10-24T11:51:21,883   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-10-24T11:51:21,885   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/moleculechecks.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-10-24T11:51:21,887   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/atomtyper.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-10-24T11:51:21,890   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/sequencestructuralalignment.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-10-24T11:51:21,892   copying build/lib.linux-armv7l-cpython-311/moleculekit/rcsb.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:21,893   copying build/lib.linux-armv7l-cpython-311/moleculekit/pymolgraphics.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:21,895   creating build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-10-24T11:51:21,896   copying build/lib.linux-armv7l-cpython-311/moleculekit/ply/yacc.py -> build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-10-24T11:51:21,900   copying build/lib.linux-armv7l-cpython-311/moleculekit/ply/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-10-24T11:51:21,902   copying build/lib.linux-armv7l-cpython-311/moleculekit/ply/lex.py -> build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-10-24T11:51:21,904   copying build/lib.linux-armv7l-cpython-311/moleculekit/writers.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:21,907   copying build/lib.linux-armv7l-cpython-311/moleculekit/config.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:21,909   copying build/lib.linux-armv7l-cpython-311/moleculekit/version.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:21,911   creating build/bdist.linux-armv7l/wheel/moleculekit/wrapping
2023-10-24T11:51:21,912   copying build/lib.linux-armv7l-cpython-311/moleculekit/wrapping/wrapping.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/wrapping
2023-10-24T11:51:21,932   copying build/lib.linux-armv7l-cpython-311/moleculekit/wrapping/wrapping.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/wrapping
2023-10-24T11:51:21,934   creating build/bdist.linux-armv7l/wheel/moleculekit/share
2023-10-24T11:51:21,935   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/ALA.cif -> build/bdist.linux-armv7l/wheel/moleculekit/share
2023-10-24T11:51:21,938   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/opm_sequences.json -> build/bdist.linux-armv7l/wheel/moleculekit/share
2023-10-24T11:51:22,163   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/backbone.cif -> build/bdist.linux-armv7l/wheel/moleculekit/share
2023-10-24T11:51:22,166   creating build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr
2023-10-24T11:51:22,169   creating build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,170   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/D4P.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,172   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NZC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,174   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/OCY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,176   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MEQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,178   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/4IN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,180   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/GME.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,182   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/4PH.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,184   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/GNC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,186   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MVA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,188   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ME0.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,189   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/0BN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,191   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ALY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,193   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/OMX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,194   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NLE.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,196   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/SEP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,198   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MME.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,200   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/4PH.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,202   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CGU.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,203   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/OCY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,205   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MVA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,207   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/P1L.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,209   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/4IN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,211   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/I2M.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,213   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/0AF.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,215   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TY2.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,216   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/IIL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,218   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TYQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,220   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/0A1.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,222   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HYP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,224   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/03Y.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,226   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/IIL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,227   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/2MR.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,229   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HHK.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,231   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/DPP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,233   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/I2M.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,235   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TPO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,237   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/0A1.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,239   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/DA2.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,240   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HLU.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,242   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NAL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,244   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/03Y.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,246   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NLE.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,248   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,250   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NVA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,252   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/2AS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,254   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/2GX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,256   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,258   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HLX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,260   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/YCM.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,262   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MEA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,263   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ALC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,265   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/AA4.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,267   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/PTR.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,269   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MLE.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,271   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HTR.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,273   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/5JP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,275   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/DAH.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,277   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/BTK.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,279   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ONL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,281   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/4PQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,283   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/P1L.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,284   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NCY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,286   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CGU.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,288   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/IGL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,290   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/DPP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,292   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CCS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,294   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MEN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,296   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MEA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,297   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ABA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,299   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,301   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MLY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,303   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/GHG.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,305   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CCS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,307   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/004.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,309   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HQA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,311   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/2AS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,313   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/PCA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,315   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/KYN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,316   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/5JP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,318   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/M3L.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,321   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ABA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,323   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MMO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,324   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TYQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,326   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,328   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/LYZ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,330   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ALY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,332   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NCY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,333   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/APD.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,335   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/1MH.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,337   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/DA2.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,339   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/OMX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,341   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/APD.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,343   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MEQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,345   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MEN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,347   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/BTK.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,349   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/GNC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,351   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/004.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,352   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HQA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,355   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/BCS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,357   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ALC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,358   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/M3L.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,360   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/LME.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,362   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,364   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/FGL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,365   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/AA4.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,368   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,370   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/4PQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,371   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/YNM.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,373   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,375   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HPE.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,377   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/0BN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,379   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/2ML.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,381   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/2MR.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,383   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/FGL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,385   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MMO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,387   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ALN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,389   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/IML.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,391   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/IML.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,393   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TPO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,395   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,396   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HOX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,398   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/DAB.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,400   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/IGL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,403   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MLZ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,404   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/DAH.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,406   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MLY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,408   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HTR.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,410   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/0AF.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,412   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/LMQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,414   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/PRK.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,416   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/YCM.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,418   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/GHG.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,420   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ALN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,422   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ESC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,424   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HOX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,426   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ME0.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,428   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NZC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,429   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TRO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,431   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TRO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,433   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/LYZ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,435   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/AHP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,437   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/2ML.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,439   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NAL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,441   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/YNM.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,443   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/D4P.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,445   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HYP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,447   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HLU.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,448   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ORM.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,450   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HHK.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,452   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/GME.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,454   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NVA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,456   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ORM.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,458   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/BB8.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,460   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/BCS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,462   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/PRK.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,464   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/LME.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,466   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HPE.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,467   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/BB8.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,469   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ESC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,471   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/KYN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,473   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/LMQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,475   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MLZ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,477   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MME.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,479   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MLE.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,481   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/PCA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,483   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/2GX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,485   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ONL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,486   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/DAB.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,488   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/PTR.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,490   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TY2.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,492   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/1MH.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,494   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HLX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,495   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/AHP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,497   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/.gitkeep -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,499   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/SEP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-10-24T11:51:22,501   creating build/bdist.linux-armv7l/wheel/moleculekit/share/atomselect
2023-10-24T11:51:22,502   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/atomselect/atomselect.json -> build/bdist.linux-armv7l/wheel/moleculekit/share/atomselect
2023-10-24T11:51:22,504   copying build/lib.linux-armv7l-cpython-311/moleculekit/vmd_wrapper -> build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:22,506   copying build/lib.linux-armv7l-cpython-311/moleculekit/home.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:22,509   creating build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-10-24T11:51:22,510   creating build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-10-24T11:51:22,511   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools/test_tools.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-10-24T11:51:22,514   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools/clustering.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-10-24T11:51:22,516   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-10-24T11:51:22,519   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools/restrainedembed.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-10-24T11:51:22,520   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/test_smallmol.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-10-24T11:51:22,523   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-10-24T11:51:22,525   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/test_smallmollib.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-10-24T11:51:22,527   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/util.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-10-24T11:51:22,530   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/smallmol.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-10-24T11:51:22,533   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/smallmollib.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-10-24T11:51:22,536   copying build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:22,539   creating build/bdist.linux-armv7l/wheel/moleculekit/occupancy_utils
2023-10-24T11:51:22,540   copying build/lib.linux-armv7l-cpython-311/moleculekit/occupancy_utils/occupancy_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/occupancy_utils
2023-10-24T11:51:22,542   copying build/lib.linux-armv7l-cpython-311/moleculekit/occupancy_utils/occupancy_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/occupancy_utils
2023-10-24T11:51:22,561   copying build/lib.linux-armv7l-cpython-311/moleculekit/vmdgraphics.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:22,563   copying build/lib.linux-armv7l-cpython-311/moleculekit/wrapping.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:22,582   copying build/lib.linux-armv7l-cpython-311/moleculekit/molecule.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:22,586   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx
2023-10-24T11:51:22,587   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-10-24T11:51:22,588   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests/PdbxReaderTests.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-10-24T11:51:22,591   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-10-24T11:51:22,592   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests/PdbxReadWriteTests.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-10-24T11:51:22,595   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests/PdbxWriterTests.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-10-24T11:51:22,597   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-10-24T11:51:22,598   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader/PdbxContainers.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-10-24T11:51:22,601   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader/PdbxParser.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-10-24T11:51:22,604   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-10-24T11:51:22,605   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader/PdbxReader.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-10-24T11:51:22,608   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx
2023-10-24T11:51:22,610   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx/writer
2023-10-24T11:51:22,611   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/writer/PdbxWriter.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/writer
2023-10-24T11:51:22,613   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/writer/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/writer
2023-10-24T11:51:22,615   copying build/lib.linux-armv7l-cpython-311/moleculekit/rdkitintegration.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:22,617   copying build/lib.linux-armv7l-cpython-311/moleculekit/atomselect_utils.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:22,645   copying build/lib.linux-armv7l-cpython-311/moleculekit/_version.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:22,647   creating build/bdist.linux-armv7l/wheel/moleculekit/atomselect_utils
2023-10-24T11:51:22,648   copying build/lib.linux-armv7l-cpython-311/moleculekit/atomselect_utils/atomselect_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect_utils
2023-10-24T11:51:22,672   copying build/lib.linux-armv7l-cpython-311/moleculekit/atomselect_utils/atomselect_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect_utils
2023-10-24T11:51:22,675   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-10-24T11:51:22,676   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/cationpi.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-10-24T11:51:22,718   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/interactions.py -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-10-24T11:51:22,721   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/hbonds.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-10-24T11:51:22,749   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/pipi
2023-10-24T11:51:22,750   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/pipi/pipi.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/pipi
2023-10-24T11:51:22,778   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/pipi/pipi.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/pipi
2023-10-24T11:51:22,780   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-10-24T11:51:22,783   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/sigmahole
2023-10-24T11:51:22,784   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole/sigmahole.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/sigmahole
2023-10-24T11:51:22,802   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole/sigmahole.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/sigmahole
2023-10-24T11:51:22,805   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/cationpi
2023-10-24T11:51:22,806   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/cationpi/cationpi.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/cationpi
2023-10-24T11:51:22,826   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/cationpi/cationpi.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/cationpi
2023-10-24T11:51:22,829   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/pipi.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-10-24T11:51:22,851   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-10-24T11:51:22,876   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/hbonds
2023-10-24T11:51:22,877   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/hbonds/hbonds.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/hbonds
2023-10-24T11:51:22,880   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/hbonds/hbonds.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/hbonds
2023-10-24T11:51:22,901   copying build/lib.linux-armv7l-cpython-311/moleculekit/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:22,903   copying build/lib.linux-armv7l-cpython-311/moleculekit/dihedral.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:22,905   creating build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-10-24T11:51:22,906   creating build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-10-24T11:51:22,907   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/include/xtc.h -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-10-24T11:51:22,909   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/include/xdrfile_xtc.h -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-10-24T11:51:22,911   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/include/xdrfile.h -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-10-24T11:51:22,914   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/xtc.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-10-24T11:51:22,916   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/xtc.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-10-24T11:51:22,938   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/xtclib.pxd -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-10-24T11:51:22,940   creating build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-10-24T11:51:22,941   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/src/xdrfile.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-10-24T11:51:22,944   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/src/xtc.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-10-24T11:51:22,946   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc_utils/src/xdrfile_xtc.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-10-24T11:51:22,948   copying build/lib.linux-armv7l-cpython-311/moleculekit/opm.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:22,950   copying build/lib.linux-armv7l-cpython-311/moleculekit/util.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:22,953   copying build/lib.linux-armv7l-cpython-311/moleculekit/occupancy_utils.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:22,976   creating build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-10-24T11:51:22,977   creating build/bdist.linux-armv7l/wheel/moleculekit/tmalign/include
2023-10-24T11:51:22,978   copying build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/include/TMAlign.h -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign/include
2023-10-24T11:51:22,980   copying build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/tmalignlib.pxd -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-10-24T11:51:22,982   copying build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/tmalign_util.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-10-24T11:51:22,984   creating build/bdist.linux-armv7l/wheel/moleculekit/tmalign/src
2023-10-24T11:51:22,985   copying build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/src/TMAlign.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign/src
2023-10-24T11:51:22,991   copying build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/tmalign_util.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-10-24T11:51:23,009   copying build/lib.linux-armv7l-cpython-311/moleculekit/tmalign.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:23,053   copying build/lib.linux-armv7l-cpython-311/moleculekit/viewer.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:23,055   copying build/lib.linux-armv7l-cpython-311/moleculekit/periodictable.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-10-24T11:51:23,058   creating build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-10-24T11:51:23,060   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricsasa.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-10-24T11:51:23,062   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricrmsd.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-10-24T11:51:23,065   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metriccoordinate.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-10-24T11:51:23,068   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricshell.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-10-24T11:51:23,070   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricdihedral.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-10-24T11:51:23,074   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricsphericalcoordinate.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-10-24T11:51:23,076   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricfluctuation.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-10-24T11:51:23,079   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-10-24T11:51:23,081   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricplumed2.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-10-24T11:51:23,084   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/projection.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-10-24T11:51:23,087   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/util.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-10-24T11:51:23,089   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricdistance.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-10-24T11:51:23,093   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricgyration.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-10-24T11:51:23,095   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metrictmscore.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-10-24T11:51:23,098   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricsecondarystructure.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-10-24T11:51:23,101   creating build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-10-24T11:51:23,102   copying build/lib.linux-armv7l-cpython-311/moleculekit/atomselect/languageparser.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-10-24T11:51:23,105   copying build/lib.linux-armv7l-cpython-311/moleculekit/atomselect/atomselect.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-10-24T11:51:23,107   copying build/lib.linux-armv7l-cpython-311/moleculekit/atomselect/analyze.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-10-24T11:51:23,110   copying build/lib.linux-armv7l-cpython-311/moleculekit/atomselect/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-10-24T11:51:23,112   creating build/bdist.linux-armv7l/wheel/moleculekit/bondguesser_utils
2023-10-24T11:51:23,113   copying build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser_utils/bondguesser_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/bondguesser_utils
2023-10-24T11:51:23,116   copying build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser_utils/bondguesser_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/bondguesser_utils
2023-10-24T11:51:23,136   running install_egg_info
2023-10-24T11:51:23,142   Copying moleculekit.egg-info to build/bdist.linux-armv7l/wheel/moleculekit-1.8.5-py3.11.egg-info
2023-10-24T11:51:23,156   running install_scripts
2023-10-24T11:51:23,207   creating build/bdist.linux-armv7l/wheel/moleculekit-1.8.5.dist-info/WHEEL
2023-10-24T11:51:23,210   creating '/tmp/pip-wheel-0n5zmhh7/.tmp-0hcywc8w/moleculekit-1.8.5-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-10-24T11:51:23,213   adding 'moleculekit/__init__.py'
2023-10-24T11:51:23,214   adding 'moleculekit/_version.py'
2023-10-24T11:51:23,216   adding 'moleculekit/align.py'
2023-10-24T11:51:23,540   adding 'moleculekit/atomselect_utils.cpython-311-arm-linux-gnueabihf.so'
2023-10-24T11:51:23,555   adding 'moleculekit/bondguesser.py'
2023-10-24T11:51:23,801   adding 'moleculekit/bondguesser_utils.cpython-311-arm-linux-gnueabihf.so'
2023-10-24T11:51:23,812   adding 'moleculekit/config.py'
2023-10-24T11:51:23,813   adding 'moleculekit/dihedral.py'
2023-10-24T11:51:23,815   adding 'moleculekit/distance.py'
2023-10-24T11:51:24,112   adding 'moleculekit/distance_utils.cpython-311-arm-linux-gnueabihf.so'
2023-10-24T11:51:24,125   adding 'moleculekit/home.py'
2023-10-24T11:51:24,126   adding 'moleculekit/logging.ini'
2023-10-24T11:51:24,140   adding 'moleculekit/molecule.py'
2023-10-24T11:51:24,368   adding 'moleculekit/occupancy_utils.cpython-311-arm-linux-gnueabihf.so'
2023-10-24T11:51:24,379   adding 'moleculekit/opm.py'
2023-10-24T11:51:24,381   adding 'moleculekit/periodictable.py'
2023-10-24T11:51:24,382   adding 'moleculekit/pymolgraphics.py'
2023-10-24T11:51:24,384   adding 'moleculekit/rcsb.py'
2023-10-24T11:51:24,385   adding 'moleculekit/rdkitintegration.py'
2023-10-24T11:51:24,397   adding 'moleculekit/readers.py'
2023-10-24T11:51:24,995   adding 'moleculekit/tmalign.cpython-311-arm-linux-gnueabihf.so'
2023-10-24T11:51:25,022   adding 'moleculekit/util.py'
2023-10-24T11:51:25,023   adding 'moleculekit/version.py'
2023-10-24T11:51:25,025   adding 'moleculekit/viewer.py'
2023-10-24T11:51:25,026   adding 'moleculekit/vmd_wrapper'
2023-10-24T11:51:25,028   adding 'moleculekit/vmdgraphics.py'
2023-10-24T11:51:25,030   adding 'moleculekit/vmdviewer.py'
2023-10-24T11:51:25,264   adding 'moleculekit/wrapping.cpython-311-arm-linux-gnueabihf.so'
2023-10-24T11:51:25,278   adding 'moleculekit/writers.py'
2023-10-24T11:51:25,538   adding 'moleculekit/xtc.cpython-311-arm-linux-gnueabihf.so'
2023-10-24T11:51:25,549   adding 'moleculekit/atomselect/__init__.py'
2023-10-24T11:51:25,551   adding 'moleculekit/atomselect/analyze.py'
2023-10-24T11:51:25,553   adding 'moleculekit/atomselect/atomselect.py'
2023-10-24T11:51:25,555   adding 'moleculekit/atomselect/languageparser.py'
2023-10-24T11:51:25,659   adding 'moleculekit/atomselect_utils/atomselect_utils.cpp'
2023-10-24T11:51:25,673   adding 'moleculekit/atomselect_utils/atomselect_utils.pyx'
2023-10-24T11:51:25,764   adding 'moleculekit/bondguesser_utils/bondguesser_utils.cpp'
2023-10-24T11:51:25,775   adding 'moleculekit/bondguesser_utils/bondguesser_utils.pyx'
2023-10-24T11:51:25,873   adding 'moleculekit/distance_utils/distance_utils.cpp'
2023-10-24T11:51:25,885   adding 'moleculekit/distance_utils/distance_utils.pyx'
2023-10-24T11:51:25,887   adding 'moleculekit/interactions/__init__.py'
2023-10-24T11:51:26,169   adding 'moleculekit/interactions/cationpi.cpython-311-arm-linux-gnueabihf.so'
2023-10-24T11:51:26,437   adding 'moleculekit/interactions/hbonds.cpython-311-arm-linux-gnueabihf.so'
2023-10-24T11:51:26,450   adding 'moleculekit/interactions/interactions.py'
2023-10-24T11:51:26,727   adding 'moleculekit/interactions/pipi.cpython-311-arm-linux-gnueabihf.so'
2023-10-24T11:51:27,013   adding 'moleculekit/interactions/sigmahole.cpython-311-arm-linux-gnueabihf.so'
2023-10-24T11:51:27,115   adding 'moleculekit/interactions/cationpi/cationpi.cpp'
2023-10-24T11:51:27,126   adding 'moleculekit/interactions/cationpi/cationpi.pyx'
2023-10-24T11:51:27,218   adding 'moleculekit/interactions/hbonds/hbonds.cpp'
2023-10-24T11:51:27,229   adding 'moleculekit/interactions/hbonds/hbonds.pyx'
2023-10-24T11:51:27,321   adding 'moleculekit/interactions/pipi/pipi.cpp'
2023-10-24T11:51:27,332   adding 'moleculekit/interactions/pipi/pipi.pyx'
2023-10-24T11:51:27,423   adding 'moleculekit/interactions/sigmahole/sigmahole.cpp'
2023-10-24T11:51:27,434   adding 'moleculekit/interactions/sigmahole/sigmahole.pyx'
2023-10-24T11:51:27,520   adding 'moleculekit/occupancy_utils/occupancy_utils.cpp'
2023-10-24T11:51:27,531   adding 'moleculekit/occupancy_utils/occupancy_utils.pyx'
2023-10-24T11:51:27,532   adding 'moleculekit/pdbx/__init__.py'
2023-10-24T11:51:27,536   adding 'moleculekit/pdbx/reader/PdbxContainers.py'
2023-10-24T11:51:27,539   adding 'moleculekit/pdbx/reader/PdbxParser.py'
2023-10-24T11:51:27,541   adding 'moleculekit/pdbx/reader/PdbxReader.py'
2023-10-24T11:51:27,543   adding 'moleculekit/pdbx/reader/__init__.py'
2023-10-24T11:51:27,545   adding 'moleculekit/pdbx/tests/PdbxReadWriteTests.py'
2023-10-24T11:51:27,546   adding 'moleculekit/pdbx/tests/PdbxReaderTests.py'
2023-10-24T11:51:27,548   adding 'moleculekit/pdbx/tests/PdbxWriterTests.py'
2023-10-24T11:51:27,549   adding 'moleculekit/pdbx/tests/__init__.py'
2023-10-24T11:51:27,551   adding 'moleculekit/pdbx/writer/PdbxWriter.py'
2023-10-24T11:51:27,552   adding 'moleculekit/pdbx/writer/__init__.py'
2023-10-24T11:51:27,554   adding 'moleculekit/ply/__init__.py'
2023-10-24T11:51:27,559   adding 'moleculekit/ply/lex.py'
2023-10-24T11:51:27,570   adding 'moleculekit/ply/yacc.py'
2023-10-24T11:51:27,573   adding 'moleculekit/projections/__init__.py'
2023-10-24T11:51:27,575   adding 'moleculekit/projections/metriccoordinate.py'
2023-10-24T11:51:27,578   adding 'moleculekit/projections/metricdihedral.py'
2023-10-24T11:51:27,582   adding 'moleculekit/projections/metricdistance.py'
2023-10-24T11:51:27,584   adding 'moleculekit/projections/metricfluctuation.py'
2023-10-24T11:51:27,586   adding 'moleculekit/projections/metricgyration.py'
2023-10-24T11:51:27,589   adding 'moleculekit/projections/metricplumed2.py'
2023-10-24T11:51:27,591   adding 'moleculekit/projections/metricrmsd.py'
2023-10-24T11:51:27,593   adding 'moleculekit/projections/metricsasa.py'
2023-10-24T11:51:27,595   adding 'moleculekit/projections/metricsecondarystructure.py'
2023-10-24T11:51:27,597   adding 'moleculekit/projections/metricshell.py'
2023-10-24T11:51:27,599   adding 'moleculekit/projections/metricsphericalcoordinate.py'
2023-10-24T11:51:27,600   adding 'moleculekit/projections/metrictmscore.py'
2023-10-24T11:51:27,601   adding 'moleculekit/projections/projection.py'
2023-10-24T11:51:27,603   adding 'moleculekit/projections/util.py'
2023-10-24T11:51:27,605   adding 'moleculekit/share/ALA.cif'
2023-10-24T11:51:27,606   adding 'moleculekit/share/backbone.cif'
2023-10-24T11:51:28,904   adding 'moleculekit/share/opm_sequences.json'
2023-10-24T11:51:29,014   adding 'moleculekit/share/atomselect/atomselect.json'
2023-10-24T11:51:29,023   adding 'moleculekit/share/pdb2pqr/residues/.gitkeep'
2023-10-24T11:51:29,024   adding 'moleculekit/share/pdb2pqr/residues/004.dat'
2023-10-24T11:51:29,026   adding 'moleculekit/share/pdb2pqr/residues/004.xml'
2023-10-24T11:51:29,027   adding 'moleculekit/share/pdb2pqr/residues/03Y.dat'
2023-10-24T11:51:29,028   adding 'moleculekit/share/pdb2pqr/residues/03Y.xml'
2023-10-24T11:51:29,029   adding 'moleculekit/share/pdb2pqr/residues/0A1.dat'
2023-10-24T11:51:29,031   adding 'moleculekit/share/pdb2pqr/residues/0A1.xml'
2023-10-24T11:51:29,032   adding 'moleculekit/share/pdb2pqr/residues/0AF.dat'
2023-10-24T11:51:29,033   adding 'moleculekit/share/pdb2pqr/residues/0AF.xml'
2023-10-24T11:51:29,034   adding 'moleculekit/share/pdb2pqr/residues/0BN.dat'
2023-10-24T11:51:29,036   adding 'moleculekit/share/pdb2pqr/residues/0BN.xml'
2023-10-24T11:51:29,037   adding 'moleculekit/share/pdb2pqr/residues/1MH.dat'
2023-10-24T11:51:29,038   adding 'moleculekit/share/pdb2pqr/residues/1MH.xml'
2023-10-24T11:51:29,039   adding 'moleculekit/share/pdb2pqr/residues/2AS.dat'
2023-10-24T11:51:29,040   adding 'moleculekit/share/pdb2pqr/residues/2AS.xml'
2023-10-24T11:51:29,042   adding 'moleculekit/share/pdb2pqr/residues/2GX.dat'
2023-10-24T11:51:29,043   adding 'moleculekit/share/pdb2pqr/residues/2GX.xml'
2023-10-24T11:51:29,044   adding 'moleculekit/share/pdb2pqr/residues/2ML.dat'
2023-10-24T11:51:29,046   adding 'moleculekit/share/pdb2pqr/residues/2ML.xml'
2023-10-24T11:51:29,047   adding 'moleculekit/share/pdb2pqr/residues/2MR.dat'
2023-10-24T11:51:29,048   adding 'moleculekit/share/pdb2pqr/residues/2MR.xml'
2023-10-24T11:51:29,049   adding 'moleculekit/share/pdb2pqr/residues/4IN.dat'
2023-10-24T11:51:29,051   adding 'moleculekit/share/pdb2pqr/residues/4IN.xml'
2023-10-24T11:51:29,052   adding 'moleculekit/share/pdb2pqr/residues/4PH.dat'
2023-10-24T11:51:29,053   adding 'moleculekit/share/pdb2pqr/residues/4PH.xml'
2023-10-24T11:51:29,055   adding 'moleculekit/share/pdb2pqr/residues/4PQ.dat'
2023-10-24T11:51:29,056   adding 'moleculekit/share/pdb2pqr/residues/4PQ.xml'
2023-10-24T11:51:29,057   adding 'moleculekit/share/pdb2pqr/residues/5JP.dat'
2023-10-24T11:51:29,059   adding 'moleculekit/share/pdb2pqr/residues/5JP.xml'
2023-10-24T11:51:29,060   adding 'moleculekit/share/pdb2pqr/residues/AA4.dat'
2023-10-24T11:51:29,061   adding 'moleculekit/share/pdb2pqr/residues/AA4.xml'
2023-10-24T11:51:29,062   adding 'moleculekit/share/pdb2pqr/residues/ABA.dat'
2023-10-24T11:51:29,064   adding 'moleculekit/share/pdb2pqr/residues/ABA.xml'
2023-10-24T11:51:29,065   adding 'moleculekit/share/pdb2pqr/residues/AHP.dat'
2023-10-24T11:51:29,066   adding 'moleculekit/share/pdb2pqr/residues/AHP.xml'
2023-10-24T11:51:29,067   adding 'moleculekit/share/pdb2pqr/residues/ALC.dat'
2023-10-24T11:51:29,068   adding 'moleculekit/share/pdb2pqr/residues/ALC.xml'
2023-10-24T11:51:29,070   adding 'moleculekit/share/pdb2pqr/residues/ALN.dat'
2023-10-24T11:51:29,071   adding 'moleculekit/share/pdb2pqr/residues/ALN.xml'
2023-10-24T11:51:29,072   adding 'moleculekit/share/pdb2pqr/residues/ALY.dat'
2023-10-24T11:51:29,073   adding 'moleculekit/share/pdb2pqr/residues/ALY.xml'
2023-10-24T11:51:29,074   adding 'moleculekit/share/pdb2pqr/residues/APD.dat'
2023-10-24T11:51:29,076   adding 'moleculekit/share/pdb2pqr/residues/APD.xml'
2023-10-24T11:51:29,077   adding 'moleculekit/share/pdb2pqr/residues/BB8.dat'
2023-10-24T11:51:29,078   adding 'moleculekit/share/pdb2pqr/residues/BB8.xml'
2023-10-24T11:51:29,079   adding 'moleculekit/share/pdb2pqr/residues/BCS.dat'
2023-10-24T11:51:29,081   adding 'moleculekit/share/pdb2pqr/residues/BCS.xml'
2023-10-24T11:51:29,082   adding 'moleculekit/share/pdb2pqr/residues/BTK.dat'
2023-10-24T11:51:29,083   adding 'moleculekit/share/pdb2pqr/residues/BTK.xml'
2023-10-24T11:51:29,084   adding 'moleculekit/share/pdb2pqr/residues/CCS.dat'
2023-10-24T11:51:29,086   adding 'moleculekit/share/pdb2pqr/residues/CCS.xml'
2023-10-24T11:51:29,087   adding 'moleculekit/share/pdb2pqr/residues/CGU.dat'
2023-10-24T11:51:29,088   adding 'moleculekit/share/pdb2pqr/residues/CGU.xml'
2023-10-24T11:51:29,089   adding 'moleculekit/share/pdb2pqr/residues/CSA.dat'
2023-10-24T11:51:29,090   adding 'moleculekit/share/pdb2pqr/residues/CSA.xml'
2023-10-24T11:51:29,091   adding 'moleculekit/share/pdb2pqr/residues/CSO.dat'
2023-10-24T11:51:29,093   adding 'moleculekit/share/pdb2pqr/residues/CSO.xml'
2023-10-24T11:51:29,094   adding 'moleculekit/share/pdb2pqr/residues/CSP.dat'
2023-10-24T11:51:29,095   adding 'moleculekit/share/pdb2pqr/residues/CSP.xml'
2023-10-24T11:51:29,096   adding 'moleculekit/share/pdb2pqr/residues/CSS.dat'
2023-10-24T11:51:29,098   adding 'moleculekit/share/pdb2pqr/residues/CSS.xml'
2023-10-24T11:51:29,099   adding 'moleculekit/share/pdb2pqr/residues/D4P.dat'
2023-10-24T11:51:29,100   adding 'moleculekit/share/pdb2pqr/residues/D4P.xml'
2023-10-24T11:51:29,101   adding 'moleculekit/share/pdb2pqr/residues/DA2.dat'
2023-10-24T11:51:29,102   adding 'moleculekit/share/pdb2pqr/residues/DA2.xml'
2023-10-24T11:51:29,104   adding 'moleculekit/share/pdb2pqr/residues/DAB.dat'
2023-10-24T11:51:29,105   adding 'moleculekit/share/pdb2pqr/residues/DAB.xml'
2023-10-24T11:51:29,107   adding 'moleculekit/share/pdb2pqr/residues/DAH.dat'
2023-10-24T11:51:29,108   adding 'moleculekit/share/pdb2pqr/residues/DAH.xml'
2023-10-24T11:51:29,109   adding 'moleculekit/share/pdb2pqr/residues/DPP.dat'
2023-10-24T11:51:29,110   adding 'moleculekit/share/pdb2pqr/residues/DPP.xml'
2023-10-24T11:51:29,112   adding 'moleculekit/share/pdb2pqr/residues/ESC.dat'
2023-10-24T11:51:29,113   adding 'moleculekit/share/pdb2pqr/residues/ESC.xml'
2023-10-24T11:51:29,114   adding 'moleculekit/share/pdb2pqr/residues/FGL.dat'
2023-10-24T11:51:29,115   adding 'moleculekit/share/pdb2pqr/residues/FGL.xml'
2023-10-24T11:51:29,117   adding 'moleculekit/share/pdb2pqr/residues/GHG.dat'
2023-10-24T11:51:29,118   adding 'moleculekit/share/pdb2pqr/residues/GHG.xml'
2023-10-24T11:51:29,119   adding 'moleculekit/share/pdb2pqr/residues/GME.dat'
2023-10-24T11:51:29,121   adding 'moleculekit/share/pdb2pqr/residues/GME.xml'
2023-10-24T11:51:29,122   adding 'moleculekit/share/pdb2pqr/residues/GNC.dat'
2023-10-24T11:51:29,123   adding 'moleculekit/share/pdb2pqr/residues/GNC.xml'
2023-10-24T11:51:29,124   adding 'moleculekit/share/pdb2pqr/residues/HHK.dat'
2023-10-24T11:51:29,126   adding 'moleculekit/share/pdb2pqr/residues/HHK.xml'
2023-10-24T11:51:29,127   adding 'moleculekit/share/pdb2pqr/residues/HLU.dat'
2023-10-24T11:51:29,129   adding 'moleculekit/share/pdb2pqr/residues/HLU.xml'
2023-10-24T11:51:29,130   adding 'moleculekit/share/pdb2pqr/residues/HLX.dat'
2023-10-24T11:51:29,131   adding 'moleculekit/share/pdb2pqr/residues/HLX.xml'
2023-10-24T11:51:29,132   adding 'moleculekit/share/pdb2pqr/residues/HOX.dat'
2023-10-24T11:51:29,133   adding 'moleculekit/share/pdb2pqr/residues/HOX.xml'
2023-10-24T11:51:29,135   adding 'moleculekit/share/pdb2pqr/residues/HPE.dat'
2023-10-24T11:51:29,136   adding 'moleculekit/share/pdb2pqr/residues/HPE.xml'
2023-10-24T11:51:29,137   adding 'moleculekit/share/pdb2pqr/residues/HQA.dat'
2023-10-24T11:51:29,138   adding 'moleculekit/share/pdb2pqr/residues/HQA.xml'
2023-10-24T11:51:29,139   adding 'moleculekit/share/pdb2pqr/residues/HTR.dat'
2023-10-24T11:51:29,141   adding 'moleculekit/share/pdb2pqr/residues/HTR.xml'
2023-10-24T11:51:29,142   adding 'moleculekit/share/pdb2pqr/residues/HYP.dat'
2023-10-24T11:51:29,143   adding 'moleculekit/share/pdb2pqr/residues/HYP.xml'
2023-10-24T11:51:29,144   adding 'moleculekit/share/pdb2pqr/residues/I2M.dat'
2023-10-24T11:51:29,145   adding 'moleculekit/share/pdb2pqr/residues/I2M.xml'
2023-10-24T11:51:29,147   adding 'moleculekit/share/pdb2pqr/residues/IGL.dat'
2023-10-24T11:51:29,148   adding 'moleculekit/share/pdb2pqr/residues/IGL.xml'
2023-10-24T11:51:29,149   adding 'moleculekit/share/pdb2pqr/residues/IIL.dat'
2023-10-24T11:51:29,151   adding 'moleculekit/share/pdb2pqr/residues/IIL.xml'
2023-10-24T11:51:29,152   adding 'moleculekit/share/pdb2pqr/residues/IML.dat'
2023-10-24T11:51:29,153   adding 'moleculekit/share/pdb2pqr/residues/IML.xml'
2023-10-24T11:51:29,154   adding 'moleculekit/share/pdb2pqr/residues/KYN.dat'
2023-10-24T11:51:29,155   adding 'moleculekit/share/pdb2pqr/residues/KYN.xml'
2023-10-24T11:51:29,156   adding 'moleculekit/share/pdb2pqr/residues/LME.dat'
2023-10-24T11:51:29,158   adding 'moleculekit/share/pdb2pqr/residues/LME.xml'
2023-10-24T11:51:29,159   adding 'moleculekit/share/pdb2pqr/residues/LMQ.dat'
2023-10-24T11:51:29,160   adding 'moleculekit/share/pdb2pqr/residues/LMQ.xml'
2023-10-24T11:51:29,161   adding 'moleculekit/share/pdb2pqr/residues/LYZ.dat'
2023-10-24T11:51:29,162   adding 'moleculekit/share/pdb2pqr/residues/LYZ.xml'
2023-10-24T11:51:29,164   adding 'moleculekit/share/pdb2pqr/residues/M3L.dat'
2023-10-24T11:51:29,165   adding 'moleculekit/share/pdb2pqr/residues/M3L.xml'
2023-10-24T11:51:29,166   adding 'moleculekit/share/pdb2pqr/residues/ME0.dat'
2023-10-24T11:51:29,167   adding 'moleculekit/share/pdb2pqr/residues/ME0.xml'
2023-10-24T11:51:29,169   adding 'moleculekit/share/pdb2pqr/residues/MEA.dat'
2023-10-24T11:51:29,170   adding 'moleculekit/share/pdb2pqr/residues/MEA.xml'
2023-10-24T11:51:29,171   adding 'moleculekit/share/pdb2pqr/residues/MEN.dat'
2023-10-24T11:51:29,172   adding 'moleculekit/share/pdb2pqr/residues/MEN.xml'
2023-10-24T11:51:29,174   adding 'moleculekit/share/pdb2pqr/residues/MEQ.dat'
2023-10-24T11:51:29,175   adding 'moleculekit/share/pdb2pqr/residues/MEQ.xml'
2023-10-24T11:51:29,176   adding 'moleculekit/share/pdb2pqr/residues/MLE.dat'
2023-10-24T11:51:29,177   adding 'moleculekit/share/pdb2pqr/residues/MLE.xml'
2023-10-24T11:51:29,178   adding 'moleculekit/share/pdb2pqr/residues/MLY.dat'
2023-10-24T11:51:29,180   adding 'moleculekit/share/pdb2pqr/residues/MLY.xml'
2023-10-24T11:51:29,181   adding 'moleculekit/share/pdb2pqr/residues/MLZ.dat'
2023-10-24T11:51:29,182   adding 'moleculekit/share/pdb2pqr/residues/MLZ.xml'
2023-10-24T11:51:29,184   adding 'moleculekit/share/pdb2pqr/residues/MME.dat'
2023-10-24T11:51:29,185   adding 'moleculekit/share/pdb2pqr/residues/MME.xml'
2023-10-24T11:51:29,186   adding 'moleculekit/share/pdb2pqr/residues/MMO.dat'
2023-10-24T11:51:29,188   adding 'moleculekit/share/pdb2pqr/residues/MMO.xml'
2023-10-24T11:51:29,189   adding 'moleculekit/share/pdb2pqr/residues/MVA.dat'
2023-10-24T11:51:29,190   adding 'moleculekit/share/pdb2pqr/residues/MVA.xml'
2023-10-24T11:51:29,191   adding 'moleculekit/share/pdb2pqr/residues/NAL.dat'
2023-10-24T11:51:29,193   adding 'moleculekit/share/pdb2pqr/residues/NAL.xml'
2023-10-24T11:51:29,194   adding 'moleculekit/share/pdb2pqr/residues/NCY.dat'
2023-10-24T11:51:29,195   adding 'moleculekit/share/pdb2pqr/residues/NCY.xml'
2023-10-24T11:51:29,196   adding 'moleculekit/share/pdb2pqr/residues/NLE.dat'
2023-10-24T11:51:29,198   adding 'moleculekit/share/pdb2pqr/residues/NLE.xml'
2023-10-24T11:51:29,199   adding 'moleculekit/share/pdb2pqr/residues/NVA.dat'
2023-10-24T11:51:29,200   adding 'moleculekit/share/pdb2pqr/residues/NVA.xml'
2023-10-24T11:51:29,201   adding 'moleculekit/share/pdb2pqr/residues/NZC.dat'
2023-10-24T11:51:29,202   adding 'moleculekit/share/pdb2pqr/residues/NZC.xml'
2023-10-24T11:51:29,203   adding 'moleculekit/share/pdb2pqr/residues/OCY.dat'
2023-10-24T11:51:29,204   adding 'moleculekit/share/pdb2pqr/residues/OCY.xml'
2023-10-24T11:51:29,205   adding 'moleculekit/share/pdb2pqr/residues/OMX.dat'
2023-10-24T11:51:29,207   adding 'moleculekit/share/pdb2pqr/residues/OMX.xml'
2023-10-24T11:51:29,208   adding 'moleculekit/share/pdb2pqr/residues/ONL.dat'
2023-10-24T11:51:29,209   adding 'moleculekit/share/pdb2pqr/residues/ONL.xml'
2023-10-24T11:51:29,210   adding 'moleculekit/share/pdb2pqr/residues/ORM.dat'
2023-10-24T11:51:29,212   adding 'moleculekit/share/pdb2pqr/residues/ORM.xml'
2023-10-24T11:51:29,213   adding 'moleculekit/share/pdb2pqr/residues/P1L.dat'
2023-10-24T11:51:29,214   adding 'moleculekit/share/pdb2pqr/residues/P1L.xml'
2023-10-24T11:51:29,216   adding 'moleculekit/share/pdb2pqr/residues/PCA.dat'
2023-10-24T11:51:29,217   adding 'moleculekit/share/pdb2pqr/residues/PCA.xml'
2023-10-24T11:51:29,218   adding 'moleculekit/share/pdb2pqr/residues/PRK.dat'
2023-10-24T11:51:29,219   adding 'moleculekit/share/pdb2pqr/residues/PRK.xml'
2023-10-24T11:51:29,220   adding 'moleculekit/share/pdb2pqr/residues/PTR.dat'
2023-10-24T11:51:29,222   adding 'moleculekit/share/pdb2pqr/residues/PTR.xml'
2023-10-24T11:51:29,223   adding 'moleculekit/share/pdb2pqr/residues/SEP.dat'
2023-10-24T11:51:29,224   adding 'moleculekit/share/pdb2pqr/residues/SEP.xml'
2023-10-24T11:51:29,225   adding 'moleculekit/share/pdb2pqr/residues/TPO.dat'
2023-10-24T11:51:29,226   adding 'moleculekit/share/pdb2pqr/residues/TPO.xml'
2023-10-24T11:51:29,228   adding 'moleculekit/share/pdb2pqr/residues/TRO.dat'
2023-10-24T11:51:29,229   adding 'moleculekit/share/pdb2pqr/residues/TRO.xml'
2023-10-24T11:51:29,230   adding 'moleculekit/share/pdb2pqr/residues/TY2.dat'
2023-10-24T11:51:29,232   adding 'moleculekit/share/pdb2pqr/residues/TY2.xml'
2023-10-24T11:51:29,233   adding 'moleculekit/share/pdb2pqr/residues/TYQ.dat'
2023-10-24T11:51:29,234   adding 'moleculekit/share/pdb2pqr/residues/TYQ.xml'
2023-10-24T11:51:29,235   adding 'moleculekit/share/pdb2pqr/residues/YCM.dat'
2023-10-24T11:51:29,236   adding 'moleculekit/share/pdb2pqr/residues/YCM.xml'
2023-10-24T11:51:29,238   adding 'moleculekit/share/pdb2pqr/residues/YNM.dat'
2023-10-24T11:51:29,239   adding 'moleculekit/share/pdb2pqr/residues/YNM.xml'
2023-10-24T11:51:29,241   adding 'moleculekit/smallmol/__init__.py'
2023-10-24T11:51:29,246   adding 'moleculekit/smallmol/smallmol.py'
2023-10-24T11:51:29,248   adding 'moleculekit/smallmol/smallmollib.py'
2023-10-24T11:51:29,251   adding 'moleculekit/smallmol/test_smallmol.py'
2023-10-24T11:51:29,253   adding 'moleculekit/smallmol/test_smallmollib.py'
2023-10-24T11:51:29,255   adding 'moleculekit/smallmol/util.py'
2023-10-24T11:51:29,257   adding 'moleculekit/smallmol/tools/__init__.py'
2023-10-24T11:51:29,259   adding 'moleculekit/smallmol/tools/clustering.py'
2023-10-24T11:51:29,260   adding 'moleculekit/smallmol/tools/restrainedembed.py'
2023-10-24T11:51:29,262   adding 'moleculekit/smallmol/tools/test_tools.py'
2023-10-24T11:51:29,351   adding 'moleculekit/tmalign/tmalign_util.cpp'
2023-10-24T11:51:29,362   adding 'moleculekit/tmalign/tmalign_util.pyx'
2023-10-24T11:51:29,363   adding 'moleculekit/tmalign/tmalignlib.pxd'
2023-10-24T11:51:29,365   adding 'moleculekit/tmalign/include/TMAlign.h'
2023-10-24T11:51:29,383   adding 'moleculekit/tmalign/src/TMAlign.cpp'
2023-10-24T11:51:29,386   adding 'moleculekit/tools/__init__.py'
2023-10-24T11:51:29,388   adding 'moleculekit/tools/atomtyper.py'
2023-10-24T11:51:29,390   adding 'moleculekit/tools/autosegment.py'
2023-10-24T11:51:29,392   adding 'moleculekit/tools/crystalpacking.py'
2023-10-24T11:51:29,396   adding 'moleculekit/tools/detect.py'
2023-10-24T11:51:29,398   adding 'moleculekit/tools/docking.py'
2023-10-24T11:51:29,400   adding 'moleculekit/tools/graphalignment.py'
2023-10-24T11:51:29,401   adding 'moleculekit/tools/hhblitsprofile.py'
2023-10-24T11:51:29,403   adding 'moleculekit/tools/moleculechecks.py'
2023-10-24T11:51:29,408   adding 'moleculekit/tools/preparation.py'
2023-10-24T11:51:29,411   adding 'moleculekit/tools/preparation_customres.py'
2023-10-24T11:51:29,413   adding 'moleculekit/tools/sequencestructuralalignment.py'
2023-10-24T11:51:29,416   adding 'moleculekit/tools/voxeldescriptors.py'
2023-10-24T11:51:29,418   adding 'moleculekit/tools/obabel_tools/__init__.py'
2023-10-24T11:51:29,419   adding 'moleculekit/tools/obabel_tools/obabel_cli.py'
2023-10-24T11:51:29,506   adding 'moleculekit/wrapping/wrapping.cpp'
2023-10-24T11:51:29,517   adding 'moleculekit/wrapping/wrapping.pyx'
2023-10-24T11:51:29,606   adding 'moleculekit/xtc_utils/xtc.cpp'
2023-10-24T11:51:29,618   adding 'moleculekit/xtc_utils/xtc.pyx'
2023-10-24T11:51:29,619   adding 'moleculekit/xtc_utils/xtclib.pxd'
2023-10-24T11:51:29,622   adding 'moleculekit/xtc_utils/include/xdrfile.h'
2023-10-24T11:51:29,623   adding 'moleculekit/xtc_utils/include/xdrfile_xtc.h'
2023-10-24T11:51:29,625   adding 'moleculekit/xtc_utils/include/xtc.h'
2023-10-24T11:51:29,632   adding 'moleculekit/xtc_utils/src/xdrfile.cpp'
2023-10-24T11:51:29,634   adding 'moleculekit/xtc_utils/src/xdrfile_xtc.cpp'
2023-10-24T11:51:29,636   adding 'moleculekit/xtc_utils/src/xtc.cpp'
2023-10-24T11:51:29,638   adding 'moleculekit-1.8.5.dist-info/LICENSE'
2023-10-24T11:51:29,639   adding 'moleculekit-1.8.5.dist-info/METADATA'
2023-10-24T11:51:29,640   adding 'moleculekit-1.8.5.dist-info/WHEEL'
2023-10-24T11:51:29,641   adding 'moleculekit-1.8.5.dist-info/top_level.txt'
2023-10-24T11:51:29,646   adding 'moleculekit-1.8.5.dist-info/RECORD'
2023-10-24T11:51:29,772   removing build/bdist.linux-armv7l/wheel
2023-10-24T11:51:30,062   Building wheel for moleculekit (pyproject.toml): finished with status 'done'
2023-10-24T11:51:30,344   Created wheel for moleculekit: filename=moleculekit-1.8.5-cp311-cp311-linux_armv7l.whl size=12850209 sha256=90c79ee3bc882efd5fcc26b8d882e59345ebdd6063dbb198afc474dae8479a3d
2023-10-24T11:51:30,345   Stored in directory: /tmp/pip-ephem-wheel-cache-_rkguzps/wheels/36/92/e8/75ea530bece73e575cf14392991ac64011f89f5c345a6f38d3
2023-10-24T11:51:30,369 Successfully built moleculekit
2023-10-24T11:51:30,672 Removed build tracker: '/tmp/pip-build-tracker-rjjyoarw'