2023-10-24T17:55:57,109 Created temporary directory: /tmp/pip-build-tracker-4lli4gyy 2023-10-24T17:55:57,111 Initialized build tracking at /tmp/pip-build-tracker-4lli4gyy 2023-10-24T17:55:57,111 Created build tracker: /tmp/pip-build-tracker-4lli4gyy 2023-10-24T17:55:57,112 Entered build tracker: /tmp/pip-build-tracker-4lli4gyy 2023-10-24T17:55:57,112 Created temporary directory: /tmp/pip-wheel-drldlbtv 2023-10-24T17:55:57,115 Created temporary directory: /tmp/pip-ephem-wheel-cache-cqof5bth 2023-10-24T17:55:57,140 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-10-24T17:55:57,143 2 location(s) to search for versions of bluepyemodel: 2023-10-24T17:55:57,143 * https://pypi.org/simple/bluepyemodel/ 2023-10-24T17:55:57,143 * https://www.piwheels.org/simple/bluepyemodel/ 2023-10-24T17:55:57,144 Fetching project page and analyzing links: https://pypi.org/simple/bluepyemodel/ 2023-10-24T17:55:57,145 Getting page https://pypi.org/simple/bluepyemodel/ 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https://www.piwheels.org/simple/bluepyemodel/bluepyemodel-0.0.16-py3-none-any.whl#sha256=1320b98733e0bc6ad9ce13b5dd897b4bc81267c1b828fb41ef6efc85571130d0 (from https://www.piwheels.org/simple/bluepyemodel/) 2023-10-24T17:55:57,790 Skipping link: not a file: https://www.piwheels.org/simple/bluepyemodel/ 2023-10-24T17:55:57,791 Skipping link: not a file: https://pypi.org/simple/bluepyemodel/ 2023-10-24T17:55:57,814 Given no hashes to check 1 links for project 'bluepyemodel': discarding no candidates 2023-10-24T17:55:57,832 Collecting bluepyemodel==0.0.53 2023-10-24T17:55:57,834 Created temporary directory: /tmp/pip-unpack-894dl9bs 2023-10-24T17:55:58,317 Downloading bluepyemodel-0.0.53.tar.gz (13.0 MB) 2023-10-24T17:56:02,684 Added bluepyemodel==0.0.53 from https://files.pythonhosted.org/packages/de/f8/67e8494b9dfd8a5671dc27dbc3ae8b120190b1fc484d7e2bf213aa845926/bluepyemodel-0.0.53.tar.gz to build tracker '/tmp/pip-build-tracker-4lli4gyy' 2023-10-24T17:56:02,686 Running setup.py (path:/tmp/pip-wheel-drldlbtv/bluepyemodel_76221308130d46f4b3ab71d27557420e/setup.py) egg_info for package bluepyemodel 2023-10-24T17:56:02,687 Created temporary directory: /tmp/pip-pip-egg-info-_963vcrn 2023-10-24T17:56:02,688 Preparing metadata (setup.py): started 2023-10-24T17:56:02,690 Running command python setup.py egg_info 2023-10-24T17:56:03,091 /tmp/pip-wheel-drldlbtv/bluepyemodel_76221308130d46f4b3ab71d27557420e/setup.py:19: DeprecationWarning: the imp module is deprecated in favour of importlib and slated for removal in Python 3.12; see the module's documentation for alternative uses 2023-10-24T17:56:03,092 import imp 2023-10-24T17:56:03,369 /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:80: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2023-10-24T17:56:03,369 !! 2023-10-24T17:56:03,370 ******************************************************************************** 2023-10-24T17:56:03,371 Requirements should be satisfied by a PEP 517 installer. 2023-10-24T17:56:03,371 If you are using pip, you can try `pip install --use-pep517`. 2023-10-24T17:56:03,372 ******************************************************************************** 2023-10-24T17:56:03,373 !! 2023-10-24T17:56:03,373 dist.fetch_build_eggs(dist.setup_requires) 2023-10-24T17:56:06,368 WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' 2023-10-24T17:56:06,472 running egg_info 2023-10-24T17:56:06,473 creating /tmp/pip-pip-egg-info-_963vcrn/bluepyemodel.egg-info 2023-10-24T17:56:06,500 writing /tmp/pip-pip-egg-info-_963vcrn/bluepyemodel.egg-info/PKG-INFO 2023-10-24T17:56:06,508 writing dependency_links to /tmp/pip-pip-egg-info-_963vcrn/bluepyemodel.egg-info/dependency_links.txt 2023-10-24T17:56:06,513 writing requirements to /tmp/pip-pip-egg-info-_963vcrn/bluepyemodel.egg-info/requires.txt 2023-10-24T17:56:06,515 writing top-level names to /tmp/pip-pip-egg-info-_963vcrn/bluepyemodel.egg-info/top_level.txt 2023-10-24T17:56:06,516 writing manifest file '/tmp/pip-pip-egg-info-_963vcrn/bluepyemodel.egg-info/SOURCES.txt' 2023-10-24T17:56:06,695 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2023-10-24T17:56:06,702 reading manifest file '/tmp/pip-pip-egg-info-_963vcrn/bluepyemodel.egg-info/SOURCES.txt' 2023-10-24T17:56:06,703 reading manifest template 'MANIFEST.in' 2023-10-24T17:56:06,704 adding license file 'LICENSE.txt' 2023-10-24T17:56:06,705 adding license file 'COPYING' 2023-10-24T17:56:06,705 adding license file 'AUTHORS.txt' 2023-10-24T17:56:06,710 writing manifest file '/tmp/pip-pip-egg-info-_963vcrn/bluepyemodel.egg-info/SOURCES.txt' 2023-10-24T17:56:06,825 Preparing metadata (setup.py): finished with status 'done' 2023-10-24T17:56:06,830 Source in /tmp/pip-wheel-drldlbtv/bluepyemodel_76221308130d46f4b3ab71d27557420e has version 0.0.53, which satisfies requirement bluepyemodel==0.0.53 from https://files.pythonhosted.org/packages/de/f8/67e8494b9dfd8a5671dc27dbc3ae8b120190b1fc484d7e2bf213aa845926/bluepyemodel-0.0.53.tar.gz 2023-10-24T17:56:06,831 Removed bluepyemodel==0.0.53 from https://files.pythonhosted.org/packages/de/f8/67e8494b9dfd8a5671dc27dbc3ae8b120190b1fc484d7e2bf213aa845926/bluepyemodel-0.0.53.tar.gz from build tracker '/tmp/pip-build-tracker-4lli4gyy' 2023-10-24T17:56:06,836 Created temporary directory: /tmp/pip-unpack-8lmznhvi 2023-10-24T17:56:06,837 Created temporary directory: /tmp/pip-unpack-huxiajon 2023-10-24T17:56:06,896 Building wheels for collected packages: bluepyemodel 2023-10-24T17:56:06,900 Created temporary directory: /tmp/pip-wheel-kaf24obb 2023-10-24T17:56:06,901 Building wheel for bluepyemodel (setup.py): started 2023-10-24T17:56:06,902 Destination directory: /tmp/pip-wheel-kaf24obb 2023-10-24T17:56:06,903 Running command python setup.py bdist_wheel 2023-10-24T17:56:07,302 /tmp/pip-wheel-drldlbtv/bluepyemodel_76221308130d46f4b3ab71d27557420e/setup.py:19: DeprecationWarning: the imp module is deprecated in favour of importlib and slated for removal in Python 3.12; see the module's documentation for alternative uses 2023-10-24T17:56:07,303 import imp 2023-10-24T17:56:07,580 /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:80: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2023-10-24T17:56:07,580 !! 2023-10-24T17:56:07,581 ******************************************************************************** 2023-10-24T17:56:07,582 Requirements should be satisfied by a PEP 517 installer. 2023-10-24T17:56:07,582 If you are using pip, you can try `pip install --use-pep517`. 2023-10-24T17:56:07,583 ******************************************************************************** 2023-10-24T17:56:07,583 !! 2023-10-24T17:56:07,584 dist.fetch_build_eggs(dist.setup_requires) 2023-10-24T17:56:08,105 WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' 2023-10-24T17:56:08,202 running bdist_wheel 2023-10-24T17:56:08,304 running build 2023-10-24T17:56:08,305 running build_py 2023-10-24T17:56:08,334 creating build 2023-10-24T17:56:08,335 creating build/lib 2023-10-24T17:56:08,335 creating build/lib/tests 2023-10-24T17:56:08,337 copying tests/__init__.py -> build/lib/tests 2023-10-24T17:56:08,339 creating build/lib/bluepyemodel 2023-10-24T17:56:08,340 copying bluepyemodel/__init__.py -> build/lib/bluepyemodel 2023-10-24T17:56:08,342 creating build/lib/tests/functional_tests 2023-10-24T17:56:08,343 copying tests/functional_tests/test_protocols.py -> build/lib/tests/functional_tests 2023-10-24T17:56:08,345 copying tests/functional_tests/__init__.py -> build/lib/tests/functional_tests 2023-10-24T17:56:08,346 copying tests/functional_tests/test_validation.py -> build/lib/tests/functional_tests 2023-10-24T17:56:08,349 creating build/lib/tests/unit_tests 2023-10-24T17:56:08,350 copying tests/unit_tests/test_fitness_calculator_configuration.py -> build/lib/tests/unit_tests 2023-10-24T17:56:08,352 copying tests/unit_tests/test_tools.py -> build/lib/tests/unit_tests 2023-10-24T17:56:08,354 copying tests/unit_tests/test_local_access_point.py -> build/lib/tests/unit_tests 2023-10-24T17:56:08,355 copying tests/unit_tests/__init__.py -> build/lib/tests/unit_tests 2023-10-24T17:56:08,357 copying tests/unit_tests/test_emodelmetadata.py -> build/lib/tests/unit_tests 2023-10-24T17:56:08,359 copying tests/unit_tests/test_ecodes.py -> build/lib/tests/unit_tests 2023-10-24T17:56:08,361 copying tests/unit_tests/test_plotting.py -> build/lib/tests/unit_tests 2023-10-24T17:56:08,363 copying tests/unit_tests/test_targets_configuration.py -> build/lib/tests/unit_tests 2023-10-24T17:56:08,365 copying tests/unit_tests/test_model_parameters_configuration.py -> build/lib/tests/unit_tests 2023-10-24T17:56:08,367 copying tests/unit_tests/test_optimisation.py -> build/lib/tests/unit_tests 2023-10-24T17:56:08,369 copying tests/unit_tests/test_evaluator.py -> build/lib/tests/unit_tests 2023-10-24T17:56:08,371 copying tests/unit_tests/test_emodel_pipeline.py -> build/lib/tests/unit_tests 2023-10-24T17:56:08,372 copying tests/unit_tests/test_validation_functions.py -> build/lib/tests/unit_tests 2023-10-24T17:56:08,374 copying tests/unit_tests/test_model.py -> build/lib/tests/unit_tests 2023-10-24T17:56:08,376 creating build/lib/tests/test_models 2023-10-24T17:56:08,377 copying tests/test_models/__init__.py -> build/lib/tests/test_models 2023-10-24T17:56:08,379 copying tests/test_models/dummycells.py -> build/lib/tests/test_models 2023-10-24T17:56:08,381 creating build/lib/bluepyemodel/export_emodel 2023-10-24T17:56:08,382 copying bluepyemodel/export_emodel/__init__.py -> build/lib/bluepyemodel/export_emodel 2023-10-24T17:56:08,384 copying bluepyemodel/export_emodel/utils.py -> build/lib/bluepyemodel/export_emodel 2023-10-24T17:56:08,386 copying bluepyemodel/export_emodel/export_emodel.py -> build/lib/bluepyemodel/export_emodel 2023-10-24T17:56:08,389 creating build/lib/bluepyemodel/ecode 2023-10-24T17:56:08,390 copying bluepyemodel/ecode/customfromfile.py -> build/lib/bluepyemodel/ecode 2023-10-24T17:56:08,392 copying bluepyemodel/ecode/comb.py -> build/lib/bluepyemodel/ecode 2023-10-24T17:56:08,394 copying bluepyemodel/ecode/stimulus.py -> build/lib/bluepyemodel/ecode 2023-10-24T17:56:08,396 copying bluepyemodel/ecode/__init__.py -> build/lib/bluepyemodel/ecode 2023-10-24T17:56:08,397 copying bluepyemodel/ecode/ramp.py -> build/lib/bluepyemodel/ecode 2023-10-24T17:56:08,399 copying bluepyemodel/ecode/negcheops.py -> build/lib/bluepyemodel/ecode 2023-10-24T17:56:08,401 copying bluepyemodel/ecode/sinespec.py -> build/lib/bluepyemodel/ecode 2023-10-24T17:56:08,403 copying bluepyemodel/ecode/probampanmda_ems.py -> build/lib/bluepyemodel/ecode 2023-10-24T17:56:08,405 copying bluepyemodel/ecode/subwhitenoise.py -> build/lib/bluepyemodel/ecode 2023-10-24T17:56:08,406 copying bluepyemodel/ecode/random_square_inputs.py -> build/lib/bluepyemodel/ecode 2023-10-24T17:56:08,408 copying bluepyemodel/ecode/sahp.py -> build/lib/bluepyemodel/ecode 2023-10-24T17:56:08,410 copying bluepyemodel/ecode/hyperdepol.py -> build/lib/bluepyemodel/ecode 2023-10-24T17:56:08,412 copying bluepyemodel/ecode/dendrite.py -> build/lib/bluepyemodel/ecode 2023-10-24T17:56:08,414 copying bluepyemodel/ecode/noiseou3.py -> build/lib/bluepyemodel/ecode 2023-10-24T17:56:08,416 copying bluepyemodel/ecode/noise.py -> build/lib/bluepyemodel/ecode 2023-10-24T17:56:08,417 copying bluepyemodel/ecode/apwaveform.py -> build/lib/bluepyemodel/ecode 2023-10-24T17:56:08,419 copying bluepyemodel/ecode/spikerec.py -> build/lib/bluepyemodel/ecode 2023-10-24T17:56:08,421 copying bluepyemodel/ecode/poscheops.py -> build/lib/bluepyemodel/ecode 2023-10-24T17:56:08,423 copying bluepyemodel/ecode/dehyperpol.py -> build/lib/bluepyemodel/ecode 2023-10-24T17:56:08,425 copying bluepyemodel/ecode/firepattern.py -> build/lib/bluepyemodel/ecode 2023-10-24T17:56:08,427 copying bluepyemodel/ecode/idrest.py -> build/lib/bluepyemodel/ecode 2023-10-24T17:56:08,429 copying bluepyemodel/ecode/whitenoise.py -> build/lib/bluepyemodel/ecode 2023-10-24T17:56:08,430 copying bluepyemodel/ecode/iv.py -> build/lib/bluepyemodel/ecode 2023-10-24T17:56:08,432 creating build/lib/bluepyemodel/validation 2023-10-24T17:56:08,433 copying bluepyemodel/validation/__init__.py -> build/lib/bluepyemodel/validation 2023-10-24T17:56:08,435 copying bluepyemodel/validation/validation.py -> build/lib/bluepyemodel/validation 2023-10-24T17:56:08,437 copying bluepyemodel/validation/validation_functions.py -> build/lib/bluepyemodel/validation 2023-10-24T17:56:08,439 creating build/lib/bluepyemodel/evaluation 2023-10-24T17:56:08,440 copying bluepyemodel/evaluation/evaluator.py -> build/lib/bluepyemodel/evaluation 2023-10-24T17:56:08,443 copying bluepyemodel/evaluation/__init__.py -> build/lib/bluepyemodel/evaluation 2023-10-24T17:56:08,445 copying bluepyemodel/evaluation/recordings.py -> build/lib/bluepyemodel/evaluation 2023-10-24T17:56:08,446 copying bluepyemodel/evaluation/modifiers.py -> build/lib/bluepyemodel/evaluation 2023-10-24T17:56:08,449 copying bluepyemodel/evaluation/efeature_configuration.py -> build/lib/bluepyemodel/evaluation 2023-10-24T17:56:08,451 copying bluepyemodel/evaluation/efel_feature_bpem.py -> build/lib/bluepyemodel/evaluation 2023-10-24T17:56:08,453 copying bluepyemodel/evaluation/fitness_calculator_configuration.py -> build/lib/bluepyemodel/evaluation 2023-10-24T17:56:08,455 copying bluepyemodel/evaluation/protocols.py -> build/lib/bluepyemodel/evaluation 2023-10-24T17:56:08,458 copying bluepyemodel/evaluation/protocol_configuration.py -> build/lib/bluepyemodel/evaluation 2023-10-24T17:56:08,460 copying bluepyemodel/evaluation/evaluation.py -> build/lib/bluepyemodel/evaluation 2023-10-24T17:56:08,463 creating build/lib/bluepyemodel/model 2023-10-24T17:56:08,464 copying bluepyemodel/model/model.py -> build/lib/bluepyemodel/model 2023-10-24T17:56:08,466 copying bluepyemodel/model/model_configuration.py -> build/lib/bluepyemodel/model 2023-10-24T17:56:08,468 copying bluepyemodel/model/__init__.py -> build/lib/bluepyemodel/model 2023-10-24T17:56:08,469 copying bluepyemodel/model/neuron_model_configuration.py -> build/lib/bluepyemodel/model 2023-10-24T17:56:08,472 copying bluepyemodel/model/utils.py -> build/lib/bluepyemodel/model 2023-10-24T17:56:08,473 copying bluepyemodel/model/parameter_configuration.py -> build/lib/bluepyemodel/model 2023-10-24T17:56:08,475 copying bluepyemodel/model/model_configurator.py -> build/lib/bluepyemodel/model 2023-10-24T17:56:08,477 copying bluepyemodel/model/mechanism_configuration.py -> build/lib/bluepyemodel/model 2023-10-24T17:56:08,479 copying bluepyemodel/model/distribution_configuration.py -> build/lib/bluepyemodel/model 2023-10-24T17:56:08,480 copying bluepyemodel/model/morphology_configuration.py -> build/lib/bluepyemodel/model 2023-10-24T17:56:08,483 creating build/lib/bluepyemodel/efeatures_extraction 2023-10-24T17:56:08,483 copying bluepyemodel/efeatures_extraction/targets_configurator.py -> build/lib/bluepyemodel/efeatures_extraction 2023-10-24T17:56:08,485 copying bluepyemodel/efeatures_extraction/trace_file.py -> build/lib/bluepyemodel/efeatures_extraction 2023-10-24T17:56:08,487 copying bluepyemodel/efeatures_extraction/__init__.py -> build/lib/bluepyemodel/efeatures_extraction 2023-10-24T17:56:08,489 copying bluepyemodel/efeatures_extraction/auto_targets.py -> build/lib/bluepyemodel/efeatures_extraction 2023-10-24T17:56:08,490 copying bluepyemodel/efeatures_extraction/targets_configuration.py -> build/lib/bluepyemodel/efeatures_extraction 2023-10-24T17:56:08,492 copying bluepyemodel/efeatures_extraction/target.py -> build/lib/bluepyemodel/efeatures_extraction 2023-10-24T17:56:08,494 copying bluepyemodel/efeatures_extraction/efeatures_extraction.py -> build/lib/bluepyemodel/efeatures_extraction 2023-10-24T17:56:08,496 creating build/lib/bluepyemodel/emodel_pipeline 2023-10-24T17:56:08,497 copying bluepyemodel/emodel_pipeline/__init__.py -> build/lib/bluepyemodel/emodel_pipeline 2023-10-24T17:56:08,499 copying bluepyemodel/emodel_pipeline/emodel_settings.py -> build/lib/bluepyemodel/emodel_pipeline 2023-10-24T17:56:08,501 copying bluepyemodel/emodel_pipeline/emodel.py -> build/lib/bluepyemodel/emodel_pipeline 2023-10-24T17:56:08,503 copying bluepyemodel/emodel_pipeline/emodel_script.py -> build/lib/bluepyemodel/emodel_pipeline 2023-10-24T17:56:08,505 copying bluepyemodel/emodel_pipeline/plotting.py -> build/lib/bluepyemodel/emodel_pipeline 2023-10-24T17:56:08,507 copying bluepyemodel/emodel_pipeline/emodel_workflow.py -> build/lib/bluepyemodel/emodel_pipeline 2023-10-24T17:56:08,509 copying bluepyemodel/emodel_pipeline/emodel_pipeline.py -> build/lib/bluepyemodel/emodel_pipeline 2023-10-24T17:56:08,511 copying bluepyemodel/emodel_pipeline/emodel_metadata.py -> build/lib/bluepyemodel/emodel_pipeline 2023-10-24T17:56:08,514 creating build/lib/bluepyemodel/optimisation 2023-10-24T17:56:08,514 copying bluepyemodel/optimisation/__init__.py -> build/lib/bluepyemodel/optimisation 2023-10-24T17:56:08,516 copying bluepyemodel/optimisation/optimisation.py -> build/lib/bluepyemodel/optimisation 2023-10-24T17:56:08,519 creating build/lib/bluepyemodel/tools 2023-10-24T17:56:08,520 copying bluepyemodel/tools/multiprocessing.py -> build/lib/bluepyemodel/tools 2023-10-24T17:56:08,522 copying bluepyemodel/tools/__init__.py -> build/lib/bluepyemodel/tools 2023-10-24T17:56:08,523 copying bluepyemodel/tools/mechanisms.py -> build/lib/bluepyemodel/tools 2023-10-24T17:56:08,525 copying bluepyemodel/tools/search_pdfs.py -> build/lib/bluepyemodel/tools 2023-10-24T17:56:08,527 copying bluepyemodel/tools/morphology.py -> build/lib/bluepyemodel/tools 2023-10-24T17:56:08,529 copying bluepyemodel/tools/utils.py -> build/lib/bluepyemodel/tools 2023-10-24T17:56:08,531 creating build/lib/bluepyemodel/tasks 2023-10-24T17:56:08,532 copying bluepyemodel/tasks/__init__.py -> build/lib/bluepyemodel/tasks 2023-10-24T17:56:08,534 copying bluepyemodel/tasks/luigi_custom.py -> build/lib/bluepyemodel/tasks 2023-10-24T17:56:08,536 copying bluepyemodel/tasks/luigi_tools.py -> build/lib/bluepyemodel/tasks 2023-10-24T17:56:08,538 copying bluepyemodel/tasks/config.py -> build/lib/bluepyemodel/tasks 2023-10-24T17:56:08,540 creating build/lib/bluepyemodel/access_point 2023-10-24T17:56:08,541 copying bluepyemodel/access_point/__init__.py -> build/lib/bluepyemodel/access_point 2023-10-24T17:56:08,543 copying bluepyemodel/access_point/access_point.py -> build/lib/bluepyemodel/access_point 2023-10-24T17:56:08,545 copying bluepyemodel/access_point/local.py -> build/lib/bluepyemodel/access_point 2023-10-24T17:56:08,548 creating build/lib/bluepyemodel/tasks/emodel_creation 2023-10-24T17:56:08,548 copying bluepyemodel/tasks/emodel_creation/__init__.py -> build/lib/bluepyemodel/tasks/emodel_creation 2023-10-24T17:56:08,550 copying bluepyemodel/tasks/emodel_creation/optimisation.py -> build/lib/bluepyemodel/tasks/emodel_creation 2023-10-24T17:56:08,553 running egg_info 2023-10-24T17:56:08,605 writing bluepyemodel.egg-info/PKG-INFO 2023-10-24T17:56:08,613 writing dependency_links to bluepyemodel.egg-info/dependency_links.txt 2023-10-24T17:56:08,618 writing requirements to bluepyemodel.egg-info/requires.txt 2023-10-24T17:56:08,619 writing top-level names to bluepyemodel.egg-info/top_level.txt 2023-10-24T17:56:08,716 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2023-10-24T17:56:08,719 reading manifest file 'bluepyemodel.egg-info/SOURCES.txt' 2023-10-24T17:56:08,737 reading manifest template 'MANIFEST.in' 2023-10-24T17:56:08,738 adding license file 'LICENSE.txt' 2023-10-24T17:56:08,738 adding license file 'COPYING' 2023-10-24T17:56:08,739 adding license file 'AUTHORS.txt' 2023-10-24T17:56:08,747 writing manifest file 'bluepyemodel.egg-info/SOURCES.txt' 2023-10-24T17:56:08,750 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bluepyemodel.ecode.data' is absent from the `packages` configuration. 2023-10-24T17:56:08,750 !! 2023-10-24T17:56:08,752 ******************************************************************************** 2023-10-24T17:56:08,752 ############################ 2023-10-24T17:56:08,753 # Package would be ignored # 2023-10-24T17:56:08,753 ############################ 2023-10-24T17:56:08,754 Python recognizes 'bluepyemodel.ecode.data' as an importable package[^1], 2023-10-24T17:56:08,755 but it is absent from setuptools' `packages` configuration. 2023-10-24T17:56:08,756 This leads to an ambiguous overall configuration. If you want to distribute this 2023-10-24T17:56:08,756 package, please make sure that 'bluepyemodel.ecode.data' is explicitly added 2023-10-24T17:56:08,757 to the `packages` configuration field. 2023-10-24T17:56:08,758 Alternatively, you can also rely on setuptools' discovery methods 2023-10-24T17:56:08,759 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-10-24T17:56:08,759 instead of `find_packages(...)`/`find:`). 2023-10-24T17:56:08,760 You can read more about "package discovery" on setuptools documentation page: 2023-10-24T17:56:08,761 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-10-24T17:56:08,762 If you don't want 'bluepyemodel.ecode.data' to be distributed and are 2023-10-24T17:56:08,763 already explicitly excluding 'bluepyemodel.ecode.data' via 2023-10-24T17:56:08,763 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-10-24T17:56:08,764 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-10-24T17:56:08,764 combination with a more fine grained `package-data` configuration. 2023-10-24T17:56:08,765 You can read more about "package data files" on setuptools documentation page: 2023-10-24T17:56:08,766 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-10-24T17:56:08,768 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-10-24T17:56:08,769 even if it does not contain any `.py` files. 2023-10-24T17:56:08,769 On the other hand, currently there is no concept of package data 2023-10-24T17:56:08,770 directory, all directories are treated like packages. 2023-10-24T17:56:08,770 ******************************************************************************** 2023-10-24T17:56:08,771 !! 2023-10-24T17:56:08,771 check.warn(importable) 2023-10-24T17:56:08,772 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bluepyemodel.export_emodel.templates' is absent from the `packages` configuration. 2023-10-24T17:56:08,772 !! 2023-10-24T17:56:08,773 ******************************************************************************** 2023-10-24T17:56:08,774 ############################ 2023-10-24T17:56:08,774 # Package would be ignored # 2023-10-24T17:56:08,774 ############################ 2023-10-24T17:56:08,775 Python recognizes 'bluepyemodel.export_emodel.templates' as an importable package[^1], 2023-10-24T17:56:08,775 but it is absent from setuptools' `packages` configuration. 2023-10-24T17:56:08,776 This leads to an ambiguous overall configuration. If you want to distribute this 2023-10-24T17:56:08,777 package, please make sure that 'bluepyemodel.export_emodel.templates' is explicitly added 2023-10-24T17:56:08,777 to the `packages` configuration field. 2023-10-24T17:56:08,778 Alternatively, you can also rely on setuptools' discovery methods 2023-10-24T17:56:08,778 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-10-24T17:56:08,779 instead of `find_packages(...)`/`find:`). 2023-10-24T17:56:08,780 You can read more about "package discovery" on setuptools documentation page: 2023-10-24T17:56:08,781 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-10-24T17:56:08,782 If you don't want 'bluepyemodel.export_emodel.templates' to be distributed and are 2023-10-24T17:56:08,782 already explicitly excluding 'bluepyemodel.export_emodel.templates' via 2023-10-24T17:56:08,783 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-10-24T17:56:08,783 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-10-24T17:56:08,784 combination with a more fine grained `package-data` configuration. 2023-10-24T17:56:08,785 You can read more about "package data files" on setuptools documentation page: 2023-10-24T17:56:08,787 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-10-24T17:56:08,789 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-10-24T17:56:08,790 even if it does not contain any `.py` files. 2023-10-24T17:56:08,790 On the other hand, currently there is no concept of package data 2023-10-24T17:56:08,791 directory, all directories are treated like packages. 2023-10-24T17:56:08,791 ******************************************************************************** 2023-10-24T17:56:08,792 !! 2023-10-24T17:56:08,793 check.warn(importable) 2023-10-24T17:56:08,795 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'tests.test_data' is absent from the `packages` configuration. 2023-10-24T17:56:08,796 !! 2023-10-24T17:56:08,797 ******************************************************************************** 2023-10-24T17:56:08,797 ############################ 2023-10-24T17:56:08,798 # Package would be ignored # 2023-10-24T17:56:08,798 ############################ 2023-10-24T17:56:08,799 Python recognizes 'tests.test_data' as an importable package[^1], 2023-10-24T17:56:08,800 but it is absent from setuptools' `packages` configuration. 2023-10-24T17:56:08,801 This leads to an ambiguous overall configuration. If you want to distribute this 2023-10-24T17:56:08,801 package, please make sure that 'tests.test_data' is explicitly added 2023-10-24T17:56:08,801 to the `packages` configuration field. 2023-10-24T17:56:08,802 Alternatively, you can also rely on setuptools' discovery methods 2023-10-24T17:56:08,803 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-10-24T17:56:08,803 instead of `find_packages(...)`/`find:`). 2023-10-24T17:56:08,804 You can read more about "package discovery" on setuptools documentation page: 2023-10-24T17:56:08,805 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-10-24T17:56:08,806 If you don't want 'tests.test_data' to be distributed and are 2023-10-24T17:56:08,806 already explicitly excluding 'tests.test_data' via 2023-10-24T17:56:08,806 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-10-24T17:56:08,807 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-10-24T17:56:08,807 combination with a more fine grained `package-data` configuration. 2023-10-24T17:56:08,808 You can read more about "package data files" on setuptools documentation page: 2023-10-24T17:56:08,809 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-10-24T17:56:08,811 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-10-24T17:56:08,811 even if it does not contain any `.py` files. 2023-10-24T17:56:08,812 On the other hand, currently there is no concept of package data 2023-10-24T17:56:08,812 directory, all directories are treated like packages. 2023-10-24T17:56:08,812 ******************************************************************************** 2023-10-24T17:56:08,813 !! 2023-10-24T17:56:08,814 check.warn(importable) 2023-10-24T17:56:08,814 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'tests.test_data.config' is absent from the `packages` configuration. 2023-10-24T17:56:08,815 !! 2023-10-24T17:56:08,816 ******************************************************************************** 2023-10-24T17:56:08,816 ############################ 2023-10-24T17:56:08,817 # Package would be ignored # 2023-10-24T17:56:08,817 ############################ 2023-10-24T17:56:08,818 Python recognizes 'tests.test_data.config' as an importable package[^1], 2023-10-24T17:56:08,818 but it is absent from setuptools' `packages` configuration. 2023-10-24T17:56:08,819 This leads to an ambiguous overall configuration. If you want to distribute this 2023-10-24T17:56:08,820 package, please make sure that 'tests.test_data.config' is explicitly added 2023-10-24T17:56:08,820 to the `packages` configuration field. 2023-10-24T17:56:08,821 Alternatively, you can also rely on setuptools' discovery methods 2023-10-24T17:56:08,822 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-10-24T17:56:08,822 instead of `find_packages(...)`/`find:`). 2023-10-24T17:56:08,823 You can read more about "package discovery" on setuptools documentation page: 2023-10-24T17:56:08,825 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-10-24T17:56:08,826 If you don't want 'tests.test_data.config' to be distributed and are 2023-10-24T17:56:08,826 already explicitly excluding 'tests.test_data.config' via 2023-10-24T17:56:08,827 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-10-24T17:56:08,828 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-10-24T17:56:08,828 combination with a more fine grained `package-data` configuration. 2023-10-24T17:56:08,829 You can read more about "package data files" on setuptools documentation page: 2023-10-24T17:56:08,830 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-10-24T17:56:08,832 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-10-24T17:56:08,832 even if it does not contain any `.py` files. 2023-10-24T17:56:08,832 On the other hand, currently there is no concept of package data 2023-10-24T17:56:08,833 directory, all directories are treated like packages. 2023-10-24T17:56:08,833 ******************************************************************************** 2023-10-24T17:56:08,834 !! 2023-10-24T17:56:08,834 check.warn(importable) 2023-10-24T17:56:08,835 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'tests.test_data.ephys_data' is absent from the `packages` configuration. 2023-10-24T17:56:08,835 !! 2023-10-24T17:56:08,836 ******************************************************************************** 2023-10-24T17:56:08,836 ############################ 2023-10-24T17:56:08,837 # Package would be ignored # 2023-10-24T17:56:08,837 ############################ 2023-10-24T17:56:08,838 Python recognizes 'tests.test_data.ephys_data' as an importable package[^1], 2023-10-24T17:56:08,838 but it is absent from setuptools' `packages` configuration. 2023-10-24T17:56:08,839 This leads to an ambiguous overall configuration. If you want to distribute this 2023-10-24T17:56:08,840 package, please make sure that 'tests.test_data.ephys_data' is explicitly added 2023-10-24T17:56:08,840 to the `packages` configuration field. 2023-10-24T17:56:08,841 Alternatively, you can also rely on setuptools' discovery methods 2023-10-24T17:56:08,842 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-10-24T17:56:08,842 instead of `find_packages(...)`/`find:`). 2023-10-24T17:56:08,843 You can read more about "package discovery" on setuptools documentation page: 2023-10-24T17:56:08,844 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-10-24T17:56:08,845 If you don't want 'tests.test_data.ephys_data' to be distributed and are 2023-10-24T17:56:08,845 already explicitly excluding 'tests.test_data.ephys_data' via 2023-10-24T17:56:08,846 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-10-24T17:56:08,846 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-10-24T17:56:08,847 combination with a more fine grained `package-data` configuration. 2023-10-24T17:56:08,848 You can read more about "package data files" on setuptools documentation page: 2023-10-24T17:56:08,849 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-10-24T17:56:08,850 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-10-24T17:56:08,851 even if it does not contain any `.py` files. 2023-10-24T17:56:08,851 On the other hand, currently there is no concept of package data 2023-10-24T17:56:08,852 directory, all directories are treated like packages. 2023-10-24T17:56:08,852 ******************************************************************************** 2023-10-24T17:56:08,853 !! 2023-10-24T17:56:08,854 check.warn(importable) 2023-10-24T17:56:08,854 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'tests.test_data.mechanisms' is absent from the `packages` configuration. 2023-10-24T17:56:08,855 !! 2023-10-24T17:56:08,856 ******************************************************************************** 2023-10-24T17:56:08,856 ############################ 2023-10-24T17:56:08,857 # Package would be ignored # 2023-10-24T17:56:08,857 ############################ 2023-10-24T17:56:08,858 Python recognizes 'tests.test_data.mechanisms' as an importable package[^1], 2023-10-24T17:56:08,858 but it is absent from setuptools' `packages` configuration. 2023-10-24T17:56:08,859 This leads to an ambiguous overall configuration. If you want to distribute this 2023-10-24T17:56:08,859 package, please make sure that 'tests.test_data.mechanisms' is explicitly added 2023-10-24T17:56:08,860 to the `packages` configuration field. 2023-10-24T17:56:08,861 Alternatively, you can also rely on setuptools' discovery methods 2023-10-24T17:56:08,861 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-10-24T17:56:08,862 instead of `find_packages(...)`/`find:`). 2023-10-24T17:56:08,863 You can read more about "package discovery" on setuptools documentation page: 2023-10-24T17:56:08,863 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-10-24T17:56:08,864 If you don't want 'tests.test_data.mechanisms' to be distributed and are 2023-10-24T17:56:08,865 already explicitly excluding 'tests.test_data.mechanisms' via 2023-10-24T17:56:08,865 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-10-24T17:56:08,866 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-10-24T17:56:08,866 combination with a more fine grained `package-data` configuration. 2023-10-24T17:56:08,867 You can read more about "package data files" on setuptools documentation page: 2023-10-24T17:56:08,868 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-10-24T17:56:08,870 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-10-24T17:56:08,871 even if it does not contain any `.py` files. 2023-10-24T17:56:08,872 On the other hand, currently there is no concept of package data 2023-10-24T17:56:08,872 directory, all directories are treated like packages. 2023-10-24T17:56:08,873 ******************************************************************************** 2023-10-24T17:56:08,874 !! 2023-10-24T17:56:08,875 check.warn(importable) 2023-10-24T17:56:08,876 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'tests.test_data.morphology' is absent from the `packages` configuration. 2023-10-24T17:56:08,876 !! 2023-10-24T17:56:08,878 ******************************************************************************** 2023-10-24T17:56:08,878 ############################ 2023-10-24T17:56:08,879 # Package would be ignored # 2023-10-24T17:56:08,879 ############################ 2023-10-24T17:56:08,880 Python recognizes 'tests.test_data.morphology' as an importable package[^1], 2023-10-24T17:56:08,880 but it is absent from setuptools' `packages` configuration. 2023-10-24T17:56:08,882 This leads to an ambiguous overall configuration. If you want to distribute this 2023-10-24T17:56:08,882 package, please make sure that 'tests.test_data.morphology' is explicitly added 2023-10-24T17:56:08,883 to the `packages` configuration field. 2023-10-24T17:56:08,884 Alternatively, you can also rely on setuptools' discovery methods 2023-10-24T17:56:08,884 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-10-24T17:56:08,885 instead of `find_packages(...)`/`find:`). 2023-10-24T17:56:08,886 You can read more about "package discovery" on setuptools documentation page: 2023-10-24T17:56:08,887 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-10-24T17:56:08,901 If you don't want 'tests.test_data.morphology' to be distributed and are 2023-10-24T17:56:08,903 already explicitly excluding 'tests.test_data.morphology' via 2023-10-24T17:56:08,910 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-10-24T17:56:08,928 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-10-24T17:56:08,943 combination with a more fine grained `package-data` configuration. 2023-10-24T17:56:08,945 You can read more about "package data files" on setuptools documentation page: 2023-10-24T17:56:08,945 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-10-24T17:56:08,947 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-10-24T17:56:08,947 even if it does not contain any `.py` files. 2023-10-24T17:56:08,948 On the other hand, currently there is no concept of package data 2023-10-24T17:56:08,948 directory, all directories are treated like packages. 2023-10-24T17:56:08,949 ******************************************************************************** 2023-10-24T17:56:08,950 !! 2023-10-24T17:56:08,950 check.warn(importable) 2023-10-24T17:56:08,951 creating build/lib/tests/test_data 2023-10-24T17:56:08,951 copying tests/test_data/final.json -> build/lib/tests/test_data 2023-10-24T17:56:08,951 copying tests/test_data/final_tmp.json -> build/lib/tests/test_data 2023-10-24T17:56:08,952 copying tests/test_data/test_APWaveform_320.soma.v.csv -> build/lib/tests/test_data 2023-10-24T17:56:08,952 copying tests/test_data/test_IV_-100.soma.v.csv -> build/lib/tests/test_data 2023-10-24T17:56:08,953 copying tests/test_data/test_RMPProtocol.soma.v.csv -> build/lib/tests/test_data 2023-10-24T17:56:08,953 copying tests/test_data/test_RinProtocol.soma.v.csv -> build/lib/tests/test_data 2023-10-24T17:56:08,954 copying tests/test_data/test_SpikeRec_600.soma.v.csv -> build/lib/tests/test_data 2023-10-24T17:56:08,954 copying tests/test_data/test_Step_200.soma.v.csv -> build/lib/tests/test_data 2023-10-24T17:56:08,955 copying tests/test_data/test_Step_280.soma.v.csv -> build/lib/tests/test_data 2023-10-24T17:56:08,955 copying tests/test_data/test_bAP.ca_ais.cai.csv -> build/lib/tests/test_data 2023-10-24T17:56:08,956 copying tests/test_data/test_bAP.ca_prox_apic.cai.csv -> build/lib/tests/test_data 2023-10-24T17:56:08,956 copying tests/test_data/test_bAP.ca_prox_basal.cai.csv -> build/lib/tests/test_data 2023-10-24T17:56:08,957 copying tests/test_data/test_bAP.ca_soma.cai.csv -> build/lib/tests/test_data 2023-10-24T17:56:08,957 copying tests/test_data/test_bAP.dend1.v.csv -> build/lib/tests/test_data 2023-10-24T17:56:08,958 copying tests/test_data/test_bAP.dend2.v.csv -> build/lib/tests/test_data 2023-10-24T17:56:08,958 copying tests/test_data/test_bAP.soma.v.csv -> build/lib/tests/test_data 2023-10-24T17:56:08,959 copying tests/test_data/test_features.json -> build/lib/tests/test_data 2023-10-24T17:56:08,959 copying tests/test_data/test_mechanisms.json -> build/lib/tests/test_data 2023-10-24T17:56:08,960 copying tests/test_data/test_parameters.json -> build/lib/tests/test_data 2023-10-24T17:56:08,960 copying tests/test_data/test_protocols.json -> build/lib/tests/test_data 2023-10-24T17:56:08,961 copying tests/test_data/test_recipes.json -> build/lib/tests/test_data 2023-10-24T17:56:08,962 creating build/lib/tests/test_data/config 2023-10-24T17:56:08,962 copying tests/test_data/config/config_dict.json -> build/lib/tests/test_data/config 2023-10-24T17:56:08,963 copying tests/test_data/config/features.json -> build/lib/tests/test_data/config 2023-10-24T17:56:08,963 copying tests/test_data/config/params.json -> build/lib/tests/test_data/config 2023-10-24T17:56:08,964 copying tests/test_data/config/params_restart.json -> build/lib/tests/test_data/config 2023-10-24T17:56:08,964 copying tests/test_data/config/protocols.json -> build/lib/tests/test_data/config 2023-10-24T17:56:08,965 copying tests/test_data/config/recipes.json -> build/lib/tests/test_data/config 2023-10-24T17:56:08,965 copying tests/test_data/config/recipes_restart.json -> build/lib/tests/test_data/config 2023-10-24T17:56:08,966 creating build/lib/tests/test_data/ephys_data 2023-10-24T17:56:08,966 copying tests/test_data/ephys_data/C010600C1-MT-C1.nwb -> build/lib/tests/test_data/ephys_data 2023-10-24T17:56:08,966 creating build/lib/tests/test_data/mechanisms 2023-10-24T17:56:08,967 copying tests/test_data/mechanisms/CaDynamics_DC0.mod -> build/lib/tests/test_data/mechanisms 2023-10-24T17:56:08,968 copying tests/test_data/mechanisms/Ca_HVA2.mod -> build/lib/tests/test_data/mechanisms 2023-10-24T17:56:08,968 copying tests/test_data/mechanisms/Ca_LVAst.mod -> build/lib/tests/test_data/mechanisms 2023-10-24T17:56:08,968 copying tests/test_data/mechanisms/Ih.mod -> build/lib/tests/test_data/mechanisms 2023-10-24T17:56:08,969 copying tests/test_data/mechanisms/K_Pst.mod -> build/lib/tests/test_data/mechanisms 2023-10-24T17:56:08,970 copying tests/test_data/mechanisms/K_Tst.mod -> build/lib/tests/test_data/mechanisms 2023-10-24T17:56:08,970 copying tests/test_data/mechanisms/NaTg.mod -> build/lib/tests/test_data/mechanisms 2023-10-24T17:56:08,971 copying tests/test_data/mechanisms/Nap_Et2.mod -> build/lib/tests/test_data/mechanisms 2023-10-24T17:56:08,971 copying tests/test_data/mechanisms/SK_E2.mod -> build/lib/tests/test_data/mechanisms 2023-10-24T17:56:08,972 copying tests/test_data/mechanisms/SKv3_1.mod -> build/lib/tests/test_data/mechanisms 2023-10-24T17:56:08,972 creating build/lib/tests/test_data/morphology 2023-10-24T17:56:08,977 copying tests/test_data/morphology/C060114A5.asc -> build/lib/tests/test_data/morphology 2023-10-24T17:56:08,985 creating build/lib/bluepyemodel/export_emodel/templates 2023-10-24T17:56:08,986 copying bluepyemodel/export_emodel/templates/cell_template.jinja2 -> build/lib/bluepyemodel/export_emodel/templates 2023-10-24T17:56:08,988 copying bluepyemodel/export_emodel/templates/cell_template_neurodamus.jinja2 -> build/lib/bluepyemodel/export_emodel/templates 2023-10-24T17:56:08,991 copying bluepyemodel/export_emodel/templates/cell_template_neurodamus_sbo.jinja2 -> build/lib/bluepyemodel/export_emodel/templates 2023-10-24T17:56:08,993 creating build/lib/bluepyemodel/ecode/data 2023-10-24T17:56:08,994 copying bluepyemodel/ecode/data/NoiseOU3.txt -> build/lib/bluepyemodel/ecode/data 2023-10-24T17:56:09,426 copying bluepyemodel/ecode/data/SubWhiteNoise.txt -> build/lib/bluepyemodel/ecode/data 2023-10-24T17:56:09,467 copying bluepyemodel/ecode/data/WhiteNoise.txt -> build/lib/bluepyemodel/ecode/data 2023-10-24T17:56:09,949 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-10-24T17:56:09,950 !! 2023-10-24T17:56:09,951 ******************************************************************************** 2023-10-24T17:56:09,952 Please avoid running ``setup.py`` directly. 2023-10-24T17:56:09,952 Instead, use pypa/build, pypa/installer or other 2023-10-24T17:56:09,953 standards-based tools. 2023-10-24T17:56:09,954 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-10-24T17:56:09,955 ******************************************************************************** 2023-10-24T17:56:09,956 !! 2023-10-24T17:56:09,956 self.initialize_options() 2023-10-24T17:56:09,979 installing to build/bdist.linux-armv7l/wheel 2023-10-24T17:56:09,980 running install 2023-10-24T17:56:10,004 running install_lib 2023-10-24T17:56:10,031 creating build/bdist.linux-armv7l 2023-10-24T17:56:10,031 creating build/bdist.linux-armv7l/wheel 2023-10-24T17:56:10,033 creating build/bdist.linux-armv7l/wheel/tests 2023-10-24T17:56:10,035 creating build/bdist.linux-armv7l/wheel/tests/functional_tests 2023-10-24T17:56:10,037 copying build/lib/tests/functional_tests/test_protocols.py -> build/bdist.linux-armv7l/wheel/tests/functional_tests 2023-10-24T17:56:10,039 copying build/lib/tests/functional_tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests/functional_tests 2023-10-24T17:56:10,041 copying build/lib/tests/functional_tests/test_validation.py -> build/bdist.linux-armv7l/wheel/tests/functional_tests 2023-10-24T17:56:10,043 copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests 2023-10-24T17:56:10,046 creating build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-24T17:56:10,047 copying build/lib/tests/test_data/test_bAP.ca_prox_basal.cai.csv -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-24T17:56:10,050 copying build/lib/tests/test_data/test_bAP.ca_prox_apic.cai.csv -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-24T17:56:10,053 copying build/lib/tests/test_data/test_bAP.soma.v.csv -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-24T17:56:10,055 copying build/lib/tests/test_data/test_features.json -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-24T17:56:10,058 copying build/lib/tests/test_data/test_bAP.ca_soma.cai.csv -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-24T17:56:10,061 copying build/lib/tests/test_data/test_SpikeRec_600.soma.v.csv -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-24T17:56:10,063 creating build/bdist.linux-armv7l/wheel/tests/test_data/config 2023-10-24T17:56:10,065 copying build/lib/tests/test_data/config/features.json -> build/bdist.linux-armv7l/wheel/tests/test_data/config 2023-10-24T17:56:10,067 copying build/lib/tests/test_data/config/config_dict.json -> build/bdist.linux-armv7l/wheel/tests/test_data/config 2023-10-24T17:56:10,069 copying build/lib/tests/test_data/config/params_restart.json -> build/bdist.linux-armv7l/wheel/tests/test_data/config 2023-10-24T17:56:10,072 copying build/lib/tests/test_data/config/protocols.json -> build/bdist.linux-armv7l/wheel/tests/test_data/config 2023-10-24T17:56:10,074 copying build/lib/tests/test_data/config/recipes.json -> build/bdist.linux-armv7l/wheel/tests/test_data/config 2023-10-24T17:56:10,076 copying build/lib/tests/test_data/config/params.json -> build/bdist.linux-armv7l/wheel/tests/test_data/config 2023-10-24T17:56:10,078 copying build/lib/tests/test_data/config/recipes_restart.json -> build/bdist.linux-armv7l/wheel/tests/test_data/config 2023-10-24T17:56:10,080 copying build/lib/tests/test_data/test_Step_280.soma.v.csv -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-24T17:56:10,087 copying build/lib/tests/test_data/test_bAP.dend2.v.csv -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-24T17:56:10,090 copying build/lib/tests/test_data/final_tmp.json -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-24T17:56:10,092 copying build/lib/tests/test_data/test_recipes.json -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-24T17:56:10,095 copying build/lib/tests/test_data/test_bAP.ca_ais.cai.csv -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-24T17:56:10,098 copying build/lib/tests/test_data/test_Step_200.soma.v.csv -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-24T17:56:10,104 copying build/lib/tests/test_data/final.json -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-24T17:56:10,107 copying build/lib/tests/test_data/test_parameters.json -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-24T17:56:10,109 copying build/lib/tests/test_data/test_APWaveform_320.soma.v.csv -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-24T17:56:10,111 copying build/lib/tests/test_data/test_IV_-100.soma.v.csv -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-24T17:56:10,114 creating build/bdist.linux-armv7l/wheel/tests/test_data/morphology 2023-10-24T17:56:10,115 copying build/lib/tests/test_data/morphology/C060114A5.asc -> build/bdist.linux-armv7l/wheel/tests/test_data/morphology 2023-10-24T17:56:10,127 creating build/bdist.linux-armv7l/wheel/tests/test_data/ephys_data 2023-10-24T17:56:10,128 copying build/lib/tests/test_data/ephys_data/C010600C1-MT-C1.nwb -> build/bdist.linux-armv7l/wheel/tests/test_data/ephys_data 2023-10-24T17:56:10,205 copying build/lib/tests/test_data/test_RMPProtocol.soma.v.csv -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-24T17:56:10,208 copying build/lib/tests/test_data/test_bAP.dend1.v.csv -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-24T17:56:10,211 creating build/bdist.linux-armv7l/wheel/tests/test_data/mechanisms 2023-10-24T17:56:10,212 copying build/lib/tests/test_data/mechanisms/Ih.mod -> build/bdist.linux-armv7l/wheel/tests/test_data/mechanisms 2023-10-24T17:56:10,214 copying build/lib/tests/test_data/mechanisms/SKv3_1.mod -> build/bdist.linux-armv7l/wheel/tests/test_data/mechanisms 2023-10-24T17:56:10,215 copying build/lib/tests/test_data/mechanisms/CaDynamics_DC0.mod -> build/bdist.linux-armv7l/wheel/tests/test_data/mechanisms 2023-10-24T17:56:10,218 copying build/lib/tests/test_data/mechanisms/SK_E2.mod -> build/bdist.linux-armv7l/wheel/tests/test_data/mechanisms 2023-10-24T17:56:10,220 copying build/lib/tests/test_data/mechanisms/K_Tst.mod -> build/bdist.linux-armv7l/wheel/tests/test_data/mechanisms 2023-10-24T17:56:10,221 copying build/lib/tests/test_data/mechanisms/NaTg.mod -> build/bdist.linux-armv7l/wheel/tests/test_data/mechanisms 2023-10-24T17:56:10,223 copying build/lib/tests/test_data/mechanisms/Ca_LVAst.mod -> build/bdist.linux-armv7l/wheel/tests/test_data/mechanisms 2023-10-24T17:56:10,225 copying build/lib/tests/test_data/mechanisms/Nap_Et2.mod -> build/bdist.linux-armv7l/wheel/tests/test_data/mechanisms 2023-10-24T17:56:10,227 copying build/lib/tests/test_data/mechanisms/K_Pst.mod -> build/bdist.linux-armv7l/wheel/tests/test_data/mechanisms 2023-10-24T17:56:10,229 copying build/lib/tests/test_data/mechanisms/Ca_HVA2.mod -> build/bdist.linux-armv7l/wheel/tests/test_data/mechanisms 2023-10-24T17:56:10,231 copying build/lib/tests/test_data/test_mechanisms.json -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-24T17:56:10,233 copying build/lib/tests/test_data/test_protocols.json -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-24T17:56:10,235 copying build/lib/tests/test_data/test_RinProtocol.soma.v.csv -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-24T17:56:10,238 creating build/bdist.linux-armv7l/wheel/tests/unit_tests 2023-10-24T17:56:10,239 copying build/lib/tests/unit_tests/test_fitness_calculator_configuration.py -> build/bdist.linux-armv7l/wheel/tests/unit_tests 2023-10-24T17:56:10,241 copying build/lib/tests/unit_tests/test_tools.py -> build/bdist.linux-armv7l/wheel/tests/unit_tests 2023-10-24T17:56:10,244 copying build/lib/tests/unit_tests/test_local_access_point.py -> build/bdist.linux-armv7l/wheel/tests/unit_tests 2023-10-24T17:56:10,246 copying build/lib/tests/unit_tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests/unit_tests 2023-10-24T17:56:10,247 copying build/lib/tests/unit_tests/test_emodelmetadata.py -> build/bdist.linux-armv7l/wheel/tests/unit_tests 2023-10-24T17:56:10,250 copying build/lib/tests/unit_tests/test_ecodes.py -> build/bdist.linux-armv7l/wheel/tests/unit_tests 2023-10-24T17:56:10,253 copying build/lib/tests/unit_tests/test_plotting.py -> build/bdist.linux-armv7l/wheel/tests/unit_tests 2023-10-24T17:56:10,255 copying build/lib/tests/unit_tests/test_targets_configuration.py -> build/bdist.linux-armv7l/wheel/tests/unit_tests 2023-10-24T17:56:10,256 copying build/lib/tests/unit_tests/test_model_parameters_configuration.py -> build/bdist.linux-armv7l/wheel/tests/unit_tests 2023-10-24T17:56:10,259 copying build/lib/tests/unit_tests/test_optimisation.py -> build/bdist.linux-armv7l/wheel/tests/unit_tests 2023-10-24T17:56:10,261 copying build/lib/tests/unit_tests/test_evaluator.py -> build/bdist.linux-armv7l/wheel/tests/unit_tests 2023-10-24T17:56:10,263 copying build/lib/tests/unit_tests/test_emodel_pipeline.py -> build/bdist.linux-armv7l/wheel/tests/unit_tests 2023-10-24T17:56:10,265 copying build/lib/tests/unit_tests/test_validation_functions.py -> build/bdist.linux-armv7l/wheel/tests/unit_tests 2023-10-24T17:56:10,268 copying build/lib/tests/unit_tests/test_model.py -> build/bdist.linux-armv7l/wheel/tests/unit_tests 2023-10-24T17:56:10,270 creating build/bdist.linux-armv7l/wheel/tests/test_models 2023-10-24T17:56:10,271 copying build/lib/tests/test_models/__init__.py -> build/bdist.linux-armv7l/wheel/tests/test_models 2023-10-24T17:56:10,273 copying build/lib/tests/test_models/dummycells.py -> build/bdist.linux-armv7l/wheel/tests/test_models 2023-10-24T17:56:10,275 creating build/bdist.linux-armv7l/wheel/bluepyemodel 2023-10-24T17:56:10,277 creating build/bdist.linux-armv7l/wheel/bluepyemodel/export_emodel 2023-10-24T17:56:10,278 copying build/lib/bluepyemodel/export_emodel/__init__.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/export_emodel 2023-10-24T17:56:10,280 creating build/bdist.linux-armv7l/wheel/bluepyemodel/export_emodel/templates 2023-10-24T17:56:10,282 copying build/lib/bluepyemodel/export_emodel/templates/cell_template_neurodamus.jinja2 -> build/bdist.linux-armv7l/wheel/bluepyemodel/export_emodel/templates 2023-10-24T17:56:10,284 copying build/lib/bluepyemodel/export_emodel/templates/cell_template.jinja2 -> build/bdist.linux-armv7l/wheel/bluepyemodel/export_emodel/templates 2023-10-24T17:56:10,286 copying build/lib/bluepyemodel/export_emodel/templates/cell_template_neurodamus_sbo.jinja2 -> build/bdist.linux-armv7l/wheel/bluepyemodel/export_emodel/templates 2023-10-24T17:56:10,288 copying build/lib/bluepyemodel/export_emodel/utils.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/export_emodel 2023-10-24T17:56:10,290 copying build/lib/bluepyemodel/export_emodel/export_emodel.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/export_emodel 2023-10-24T17:56:10,293 creating build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-24T17:56:10,295 copying build/lib/bluepyemodel/ecode/customfromfile.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-24T17:56:10,297 copying build/lib/bluepyemodel/ecode/comb.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-24T17:56:10,299 copying build/lib/bluepyemodel/ecode/stimulus.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-24T17:56:10,301 copying build/lib/bluepyemodel/ecode/__init__.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-24T17:56:10,303 copying build/lib/bluepyemodel/ecode/ramp.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-24T17:56:10,306 copying build/lib/bluepyemodel/ecode/negcheops.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-24T17:56:10,308 copying build/lib/bluepyemodel/ecode/sinespec.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-24T17:56:10,310 copying build/lib/bluepyemodel/ecode/probampanmda_ems.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-24T17:56:10,312 copying build/lib/bluepyemodel/ecode/subwhitenoise.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-24T17:56:10,314 creating build/bdist.linux-armv7l/wheel/bluepyemodel/ecode/data 2023-10-24T17:56:10,315 copying build/lib/bluepyemodel/ecode/data/NoiseOU3.txt -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode/data 2023-10-24T17:56:10,763 copying build/lib/bluepyemodel/ecode/data/WhiteNoise.txt -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode/data 2023-10-24T17:56:11,232 copying build/lib/bluepyemodel/ecode/data/SubWhiteNoise.txt -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode/data 2023-10-24T17:56:11,272 copying build/lib/bluepyemodel/ecode/random_square_inputs.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-24T17:56:11,274 copying build/lib/bluepyemodel/ecode/sahp.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-24T17:56:11,277 copying build/lib/bluepyemodel/ecode/hyperdepol.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-24T17:56:11,279 copying build/lib/bluepyemodel/ecode/dendrite.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-24T17:56:11,281 copying build/lib/bluepyemodel/ecode/noiseou3.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-24T17:56:11,283 copying build/lib/bluepyemodel/ecode/noise.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-24T17:56:11,285 copying build/lib/bluepyemodel/ecode/apwaveform.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-24T17:56:11,286 copying build/lib/bluepyemodel/ecode/spikerec.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-24T17:56:11,288 copying build/lib/bluepyemodel/ecode/poscheops.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-24T17:56:11,291 copying build/lib/bluepyemodel/ecode/dehyperpol.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-24T17:56:11,293 copying build/lib/bluepyemodel/ecode/firepattern.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-24T17:56:11,294 copying build/lib/bluepyemodel/ecode/idrest.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-24T17:56:11,296 copying build/lib/bluepyemodel/ecode/whitenoise.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-24T17:56:11,298 copying build/lib/bluepyemodel/ecode/iv.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-24T17:56:11,300 creating build/bdist.linux-armv7l/wheel/bluepyemodel/validation 2023-10-24T17:56:11,300 copying build/lib/bluepyemodel/validation/__init__.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/validation 2023-10-24T17:56:11,302 copying build/lib/bluepyemodel/validation/validation.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/validation 2023-10-24T17:56:11,304 copying build/lib/bluepyemodel/validation/validation_functions.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/validation 2023-10-24T17:56:11,306 copying build/lib/bluepyemodel/__init__.py -> build/bdist.linux-armv7l/wheel/bluepyemodel 2023-10-24T17:56:11,308 creating build/bdist.linux-armv7l/wheel/bluepyemodel/evaluation 2023-10-24T17:56:11,309 copying build/lib/bluepyemodel/evaluation/evaluator.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/evaluation 2023-10-24T17:56:11,311 copying build/lib/bluepyemodel/evaluation/__init__.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/evaluation 2023-10-24T17:56:11,313 copying build/lib/bluepyemodel/evaluation/recordings.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/evaluation 2023-10-24T17:56:11,315 copying build/lib/bluepyemodel/evaluation/modifiers.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/evaluation 2023-10-24T17:56:11,318 copying build/lib/bluepyemodel/evaluation/efeature_configuration.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/evaluation 2023-10-24T17:56:11,320 copying build/lib/bluepyemodel/evaluation/efel_feature_bpem.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/evaluation 2023-10-24T17:56:11,322 copying build/lib/bluepyemodel/evaluation/fitness_calculator_configuration.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/evaluation 2023-10-24T17:56:11,324 copying build/lib/bluepyemodel/evaluation/protocols.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/evaluation 2023-10-24T17:56:11,327 copying build/lib/bluepyemodel/evaluation/protocol_configuration.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/evaluation 2023-10-24T17:56:11,329 copying build/lib/bluepyemodel/evaluation/evaluation.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/evaluation 2023-10-24T17:56:11,332 creating build/bdist.linux-armv7l/wheel/bluepyemodel/model 2023-10-24T17:56:11,333 copying build/lib/bluepyemodel/model/model.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/model 2023-10-24T17:56:11,335 copying build/lib/bluepyemodel/model/model_configuration.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/model 2023-10-24T17:56:11,337 copying build/lib/bluepyemodel/model/__init__.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/model 2023-10-24T17:56:11,339 copying build/lib/bluepyemodel/model/neuron_model_configuration.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/model 2023-10-24T17:56:11,341 copying build/lib/bluepyemodel/model/utils.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/model 2023-10-24T17:56:11,343 copying build/lib/bluepyemodel/model/parameter_configuration.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/model 2023-10-24T17:56:11,345 copying build/lib/bluepyemodel/model/model_configurator.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/model 2023-10-24T17:56:11,347 copying build/lib/bluepyemodel/model/mechanism_configuration.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/model 2023-10-24T17:56:11,349 copying build/lib/bluepyemodel/model/distribution_configuration.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/model 2023-10-24T17:56:11,350 copying build/lib/bluepyemodel/model/morphology_configuration.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/model 2023-10-24T17:56:11,353 creating build/bdist.linux-armv7l/wheel/bluepyemodel/efeatures_extraction 2023-10-24T17:56:11,353 copying build/lib/bluepyemodel/efeatures_extraction/targets_configurator.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/efeatures_extraction 2023-10-24T17:56:11,356 copying build/lib/bluepyemodel/efeatures_extraction/trace_file.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/efeatures_extraction 2023-10-24T17:56:11,357 copying build/lib/bluepyemodel/efeatures_extraction/__init__.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/efeatures_extraction 2023-10-24T17:56:11,359 copying build/lib/bluepyemodel/efeatures_extraction/auto_targets.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/efeatures_extraction 2023-10-24T17:56:11,361 copying build/lib/bluepyemodel/efeatures_extraction/targets_configuration.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/efeatures_extraction 2023-10-24T17:56:11,363 copying build/lib/bluepyemodel/efeatures_extraction/target.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/efeatures_extraction 2023-10-24T17:56:11,365 copying build/lib/bluepyemodel/efeatures_extraction/efeatures_extraction.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/efeatures_extraction 2023-10-24T17:56:11,368 creating build/bdist.linux-armv7l/wheel/bluepyemodel/emodel_pipeline 2023-10-24T17:56:11,369 copying build/lib/bluepyemodel/emodel_pipeline/__init__.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/emodel_pipeline 2023-10-24T17:56:11,370 copying build/lib/bluepyemodel/emodel_pipeline/emodel_settings.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/emodel_pipeline 2023-10-24T17:56:11,373 copying build/lib/bluepyemodel/emodel_pipeline/emodel.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/emodel_pipeline 2023-10-24T17:56:11,375 copying build/lib/bluepyemodel/emodel_pipeline/emodel_script.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/emodel_pipeline 2023-10-24T17:56:11,377 copying build/lib/bluepyemodel/emodel_pipeline/plotting.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/emodel_pipeline 2023-10-24T17:56:11,380 copying build/lib/bluepyemodel/emodel_pipeline/emodel_workflow.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/emodel_pipeline 2023-10-24T17:56:11,381 copying build/lib/bluepyemodel/emodel_pipeline/emodel_pipeline.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/emodel_pipeline 2023-10-24T17:56:11,384 copying build/lib/bluepyemodel/emodel_pipeline/emodel_metadata.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/emodel_pipeline 2023-10-24T17:56:11,386 creating build/bdist.linux-armv7l/wheel/bluepyemodel/optimisation 2023-10-24T17:56:11,387 copying build/lib/bluepyemodel/optimisation/__init__.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/optimisation 2023-10-24T17:56:11,389 copying build/lib/bluepyemodel/optimisation/optimisation.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/optimisation 2023-10-24T17:56:11,392 creating build/bdist.linux-armv7l/wheel/bluepyemodel/tools 2023-10-24T17:56:11,393 copying build/lib/bluepyemodel/tools/multiprocessing.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/tools 2023-10-24T17:56:11,395 copying build/lib/bluepyemodel/tools/__init__.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/tools 2023-10-24T17:56:11,397 copying build/lib/bluepyemodel/tools/mechanisms.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/tools 2023-10-24T17:56:11,399 copying build/lib/bluepyemodel/tools/search_pdfs.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/tools 2023-10-24T17:56:11,400 copying build/lib/bluepyemodel/tools/morphology.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/tools 2023-10-24T17:56:11,402 copying build/lib/bluepyemodel/tools/utils.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/tools 2023-10-24T17:56:11,404 creating build/bdist.linux-armv7l/wheel/bluepyemodel/tasks 2023-10-24T17:56:11,405 copying build/lib/bluepyemodel/tasks/__init__.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/tasks 2023-10-24T17:56:11,407 copying build/lib/bluepyemodel/tasks/luigi_custom.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/tasks 2023-10-24T17:56:11,409 copying build/lib/bluepyemodel/tasks/luigi_tools.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/tasks 2023-10-24T17:56:11,411 creating build/bdist.linux-armv7l/wheel/bluepyemodel/tasks/emodel_creation 2023-10-24T17:56:11,412 copying build/lib/bluepyemodel/tasks/emodel_creation/__init__.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/tasks/emodel_creation 2023-10-24T17:56:11,414 copying build/lib/bluepyemodel/tasks/emodel_creation/optimisation.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/tasks/emodel_creation 2023-10-24T17:56:11,416 copying build/lib/bluepyemodel/tasks/config.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/tasks 2023-10-24T17:56:11,419 creating build/bdist.linux-armv7l/wheel/bluepyemodel/access_point 2023-10-24T17:56:11,419 copying build/lib/bluepyemodel/access_point/__init__.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/access_point 2023-10-24T17:56:11,422 copying build/lib/bluepyemodel/access_point/access_point.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/access_point 2023-10-24T17:56:11,424 copying build/lib/bluepyemodel/access_point/local.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/access_point 2023-10-24T17:56:11,427 running install_egg_info 2023-10-24T17:56:11,455 Copying bluepyemodel.egg-info to build/bdist.linux-armv7l/wheel/bluepyemodel-0.0.53-py3.11.egg-info 2023-10-24T17:56:11,464 running install_scripts 2023-10-24T17:56:11,488 creating build/bdist.linux-armv7l/wheel/bluepyemodel-0.0.53.dist-info/WHEEL 2023-10-24T17:56:11,490 creating '/tmp/pip-wheel-kaf24obb/bluepyemodel-0.0.53-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-10-24T17:56:11,493 adding 'bluepyemodel/__init__.py' 2023-10-24T17:56:11,495 adding 'bluepyemodel/access_point/__init__.py' 2023-10-24T17:56:11,497 adding 'bluepyemodel/access_point/access_point.py' 2023-10-24T17:56:11,501 adding 'bluepyemodel/access_point/local.py' 2023-10-24T17:56:11,503 adding 'bluepyemodel/ecode/__init__.py' 2023-10-24T17:56:11,505 adding 'bluepyemodel/ecode/apwaveform.py' 2023-10-24T17:56:11,506 adding 'bluepyemodel/ecode/comb.py' 2023-10-24T17:56:11,508 adding 'bluepyemodel/ecode/customfromfile.py' 2023-10-24T17:56:11,509 adding 'bluepyemodel/ecode/dehyperpol.py' 2023-10-24T17:56:11,511 adding 'bluepyemodel/ecode/dendrite.py' 2023-10-24T17:56:11,512 adding 'bluepyemodel/ecode/firepattern.py' 2023-10-24T17:56:11,514 adding 'bluepyemodel/ecode/hyperdepol.py' 2023-10-24T17:56:11,515 adding 'bluepyemodel/ecode/idrest.py' 2023-10-24T17:56:11,517 adding 'bluepyemodel/ecode/iv.py' 2023-10-24T17:56:11,518 adding 'bluepyemodel/ecode/negcheops.py' 2023-10-24T17:56:11,520 adding 'bluepyemodel/ecode/noise.py' 2023-10-24T17:56:11,521 adding 'bluepyemodel/ecode/noiseou3.py' 2023-10-24T17:56:11,523 adding 'bluepyemodel/ecode/poscheops.py' 2023-10-24T17:56:11,524 adding 'bluepyemodel/ecode/probampanmda_ems.py' 2023-10-24T17:56:11,526 adding 'bluepyemodel/ecode/ramp.py' 2023-10-24T17:56:11,528 adding 'bluepyemodel/ecode/random_square_inputs.py' 2023-10-24T17:56:11,529 adding 'bluepyemodel/ecode/sahp.py' 2023-10-24T17:56:11,531 adding 'bluepyemodel/ecode/sinespec.py' 2023-10-24T17:56:11,533 adding 'bluepyemodel/ecode/spikerec.py' 2023-10-24T17:56:11,534 adding 'bluepyemodel/ecode/stimulus.py' 2023-10-24T17:56:11,535 adding 'bluepyemodel/ecode/subwhitenoise.py' 2023-10-24T17:56:11,537 adding 'bluepyemodel/ecode/whitenoise.py' 2023-10-24T17:56:13,946 adding 'bluepyemodel/ecode/data/NoiseOU3.txt' 2023-10-24T17:56:14,393 adding 'bluepyemodel/ecode/data/SubWhiteNoise.txt' 2023-10-24T17:56:16,809 adding 'bluepyemodel/ecode/data/WhiteNoise.txt' 2023-10-24T17:56:17,053 adding 'bluepyemodel/efeatures_extraction/__init__.py' 2023-10-24T17:56:17,055 adding 'bluepyemodel/efeatures_extraction/auto_targets.py' 2023-10-24T17:56:17,056 adding 'bluepyemodel/efeatures_extraction/efeatures_extraction.py' 2023-10-24T17:56:17,057 adding 'bluepyemodel/efeatures_extraction/target.py' 2023-10-24T17:56:17,059 adding 'bluepyemodel/efeatures_extraction/targets_configuration.py' 2023-10-24T17:56:17,060 adding 'bluepyemodel/efeatures_extraction/targets_configurator.py' 2023-10-24T17:56:17,062 adding 'bluepyemodel/efeatures_extraction/trace_file.py' 2023-10-24T17:56:17,063 adding 'bluepyemodel/emodel_pipeline/__init__.py' 2023-10-24T17:56:17,065 adding 'bluepyemodel/emodel_pipeline/emodel.py' 2023-10-24T17:56:17,066 adding 'bluepyemodel/emodel_pipeline/emodel_metadata.py' 2023-10-24T17:56:17,068 adding 'bluepyemodel/emodel_pipeline/emodel_pipeline.py' 2023-10-24T17:56:17,070 adding 'bluepyemodel/emodel_pipeline/emodel_script.py' 2023-10-24T17:56:17,072 adding 'bluepyemodel/emodel_pipeline/emodel_settings.py' 2023-10-24T17:56:17,074 adding 'bluepyemodel/emodel_pipeline/emodel_workflow.py' 2023-10-24T17:56:17,078 adding 'bluepyemodel/emodel_pipeline/plotting.py' 2023-10-24T17:56:17,080 adding 'bluepyemodel/evaluation/__init__.py' 2023-10-24T17:56:17,082 adding 'bluepyemodel/evaluation/efeature_configuration.py' 2023-10-24T17:56:17,083 adding 'bluepyemodel/evaluation/efel_feature_bpem.py' 2023-10-24T17:56:17,085 adding 'bluepyemodel/evaluation/evaluation.py' 2023-10-24T17:56:17,089 adding 'bluepyemodel/evaluation/evaluator.py' 2023-10-24T17:56:17,092 adding 'bluepyemodel/evaluation/fitness_calculator_configuration.py' 2023-10-24T17:56:17,094 adding 'bluepyemodel/evaluation/modifiers.py' 2023-10-24T17:56:17,096 adding 'bluepyemodel/evaluation/protocol_configuration.py' 2023-10-24T17:56:17,099 adding 'bluepyemodel/evaluation/protocols.py' 2023-10-24T17:56:17,101 adding 'bluepyemodel/evaluation/recordings.py' 2023-10-24T17:56:17,103 adding 'bluepyemodel/export_emodel/__init__.py' 2023-10-24T17:56:17,104 adding 'bluepyemodel/export_emodel/export_emodel.py' 2023-10-24T17:56:17,105 adding 'bluepyemodel/export_emodel/utils.py' 2023-10-24T17:56:17,108 adding 'bluepyemodel/export_emodel/templates/cell_template.jinja2' 2023-10-24T17:56:17,109 adding 'bluepyemodel/export_emodel/templates/cell_template_neurodamus.jinja2' 2023-10-24T17:56:17,111 adding 'bluepyemodel/export_emodel/templates/cell_template_neurodamus_sbo.jinja2' 2023-10-24T17:56:17,113 adding 'bluepyemodel/model/__init__.py' 2023-10-24T17:56:17,114 adding 'bluepyemodel/model/distribution_configuration.py' 2023-10-24T17:56:17,115 adding 'bluepyemodel/model/mechanism_configuration.py' 2023-10-24T17:56:17,117 adding 'bluepyemodel/model/model.py' 2023-10-24T17:56:17,119 adding 'bluepyemodel/model/model_configuration.py' 2023-10-24T17:56:17,120 adding 'bluepyemodel/model/model_configurator.py' 2023-10-24T17:56:17,121 adding 'bluepyemodel/model/morphology_configuration.py' 2023-10-24T17:56:17,124 adding 'bluepyemodel/model/neuron_model_configuration.py' 2023-10-24T17:56:17,126 adding 'bluepyemodel/model/parameter_configuration.py' 2023-10-24T17:56:17,127 adding 'bluepyemodel/model/utils.py' 2023-10-24T17:56:17,129 adding 'bluepyemodel/optimisation/__init__.py' 2023-10-24T17:56:17,130 adding 'bluepyemodel/optimisation/optimisation.py' 2023-10-24T17:56:17,132 adding 'bluepyemodel/tasks/__init__.py' 2023-10-24T17:56:17,133 adding 'bluepyemodel/tasks/config.py' 2023-10-24T17:56:17,135 adding 'bluepyemodel/tasks/luigi_custom.py' 2023-10-24T17:56:17,136 adding 'bluepyemodel/tasks/luigi_tools.py' 2023-10-24T17:56:17,138 adding 'bluepyemodel/tasks/emodel_creation/__init__.py' 2023-10-24T17:56:17,142 adding 'bluepyemodel/tasks/emodel_creation/optimisation.py' 2023-10-24T17:56:17,143 adding 'bluepyemodel/tools/__init__.py' 2023-10-24T17:56:17,145 adding 'bluepyemodel/tools/mechanisms.py' 2023-10-24T17:56:17,146 adding 'bluepyemodel/tools/morphology.py' 2023-10-24T17:56:17,147 adding 'bluepyemodel/tools/multiprocessing.py' 2023-10-24T17:56:17,149 adding 'bluepyemodel/tools/search_pdfs.py' 2023-10-24T17:56:17,150 adding 'bluepyemodel/tools/utils.py' 2023-10-24T17:56:17,152 adding 'bluepyemodel/validation/__init__.py' 2023-10-24T17:56:17,153 adding 'bluepyemodel/validation/validation.py' 2023-10-24T17:56:17,154 adding 'bluepyemodel/validation/validation_functions.py' 2023-10-24T17:56:17,157 adding 'tests/__init__.py' 2023-10-24T17:56:17,158 adding 'tests/functional_tests/__init__.py' 2023-10-24T17:56:17,159 adding 'tests/functional_tests/test_protocols.py' 2023-10-24T17:56:17,161 adding 'tests/functional_tests/test_validation.py' 2023-10-24T17:56:17,164 adding 'tests/test_data/final.json' 2023-10-24T17:56:17,167 adding 'tests/test_data/final_tmp.json' 2023-10-24T17:56:17,171 adding 'tests/test_data/test_APWaveform_320.soma.v.csv' 2023-10-24T17:56:17,174 adding 'tests/test_data/test_IV_-100.soma.v.csv' 2023-10-24T17:56:17,176 adding 'tests/test_data/test_RMPProtocol.soma.v.csv' 2023-10-24T17:56:17,177 adding 'tests/test_data/test_RinProtocol.soma.v.csv' 2023-10-24T17:56:17,180 adding 'tests/test_data/test_SpikeRec_600.soma.v.csv' 2023-10-24T17:56:17,248 adding 'tests/test_data/test_Step_200.soma.v.csv' 2023-10-24T17:56:17,323 adding 'tests/test_data/test_Step_280.soma.v.csv' 2023-10-24T17:56:17,328 adding 'tests/test_data/test_bAP.ca_ais.cai.csv' 2023-10-24T17:56:17,332 adding 'tests/test_data/test_bAP.ca_prox_apic.cai.csv' 2023-10-24T17:56:17,335 adding 'tests/test_data/test_bAP.ca_prox_basal.cai.csv' 2023-10-24T17:56:17,338 adding 'tests/test_data/test_bAP.ca_soma.cai.csv' 2023-10-24T17:56:17,342 adding 'tests/test_data/test_bAP.dend1.v.csv' 2023-10-24T17:56:17,345 adding 'tests/test_data/test_bAP.dend2.v.csv' 2023-10-24T17:56:17,349 adding 'tests/test_data/test_bAP.soma.v.csv' 2023-10-24T17:56:17,351 adding 'tests/test_data/test_features.json' 2023-10-24T17:56:17,352 adding 'tests/test_data/test_mechanisms.json' 2023-10-24T17:56:17,353 adding 'tests/test_data/test_parameters.json' 2023-10-24T17:56:17,355 adding 'tests/test_data/test_protocols.json' 2023-10-24T17:56:17,356 adding 'tests/test_data/test_recipes.json' 2023-10-24T17:56:17,358 adding 'tests/test_data/config/config_dict.json' 2023-10-24T17:56:17,359 adding 'tests/test_data/config/features.json' 2023-10-24T17:56:17,361 adding 'tests/test_data/config/params.json' 2023-10-24T17:56:17,363 adding 'tests/test_data/config/params_restart.json' 2023-10-24T17:56:17,364 adding 'tests/test_data/config/protocols.json' 2023-10-24T17:56:17,365 adding 'tests/test_data/config/recipes.json' 2023-10-24T17:56:17,367 adding 'tests/test_data/config/recipes_restart.json' 2023-10-24T17:56:17,757 adding 'tests/test_data/ephys_data/C010600C1-MT-C1.nwb' 2023-10-24T17:56:17,801 adding 'tests/test_data/mechanisms/CaDynamics_DC0.mod' 2023-10-24T17:56:17,803 adding 'tests/test_data/mechanisms/Ca_HVA2.mod' 2023-10-24T17:56:17,804 adding 'tests/test_data/mechanisms/Ca_LVAst.mod' 2023-10-24T17:56:17,805 adding 'tests/test_data/mechanisms/Ih.mod' 2023-10-24T17:56:17,807 adding 'tests/test_data/mechanisms/K_Pst.mod' 2023-10-24T17:56:17,808 adding 'tests/test_data/mechanisms/K_Tst.mod' 2023-10-24T17:56:17,810 adding 'tests/test_data/mechanisms/NaTg.mod' 2023-10-24T17:56:17,811 adding 'tests/test_data/mechanisms/Nap_Et2.mod' 2023-10-24T17:56:17,812 adding 'tests/test_data/mechanisms/SK_E2.mod' 2023-10-24T17:56:17,814 adding 'tests/test_data/mechanisms/SKv3_1.mod' 2023-10-24T17:56:17,888 adding 'tests/test_data/morphology/C060114A5.asc' 2023-10-24T17:56:17,894 adding 'tests/test_models/__init__.py' 2023-10-24T17:56:17,895 adding 'tests/test_models/dummycells.py' 2023-10-24T17:56:17,897 adding 'tests/unit_tests/__init__.py' 2023-10-24T17:56:17,900 adding 'tests/unit_tests/test_ecodes.py' 2023-10-24T17:56:17,901 adding 'tests/unit_tests/test_emodel_pipeline.py' 2023-10-24T17:56:17,902 adding 'tests/unit_tests/test_emodelmetadata.py' 2023-10-24T17:56:17,904 adding 'tests/unit_tests/test_evaluator.py' 2023-10-24T17:56:17,905 adding 'tests/unit_tests/test_fitness_calculator_configuration.py' 2023-10-24T17:56:17,907 adding 'tests/unit_tests/test_local_access_point.py' 2023-10-24T17:56:17,908 adding 'tests/unit_tests/test_model.py' 2023-10-24T17:56:17,909 adding 'tests/unit_tests/test_model_parameters_configuration.py' 2023-10-24T17:56:17,910 adding 'tests/unit_tests/test_optimisation.py' 2023-10-24T17:56:17,912 adding 'tests/unit_tests/test_plotting.py' 2023-10-24T17:56:17,913 adding 'tests/unit_tests/test_targets_configuration.py' 2023-10-24T17:56:17,914 adding 'tests/unit_tests/test_tools.py' 2023-10-24T17:56:17,916 adding 'tests/unit_tests/test_validation_functions.py' 2023-10-24T17:56:17,917 adding 'bluepyemodel-0.0.53.dist-info/AUTHORS.txt' 2023-10-24T17:56:17,919 adding 'bluepyemodel-0.0.53.dist-info/COPYING' 2023-10-24T17:56:17,920 adding 'bluepyemodel-0.0.53.dist-info/LICENSE.txt' 2023-10-24T17:56:17,921 adding 'bluepyemodel-0.0.53.dist-info/METADATA' 2023-10-24T17:56:17,922 adding 'bluepyemodel-0.0.53.dist-info/WHEEL' 2023-10-24T17:56:17,923 adding 'bluepyemodel-0.0.53.dist-info/top_level.txt' 2023-10-24T17:56:17,926 adding 'bluepyemodel-0.0.53.dist-info/RECORD' 2023-10-24T17:56:18,061 removing build/bdist.linux-armv7l/wheel 2023-10-24T17:56:18,253 Building wheel for bluepyemodel (setup.py): finished with status 'done' 2023-10-24T17:56:18,401 Created wheel for bluepyemodel: filename=bluepyemodel-0.0.53-py3-none-any.whl size=12438992 sha256=c8bccf7f7a4318c2243400d319934581764a4eb160e89de64414ee90e47d5530 2023-10-24T17:56:18,402 Stored in directory: /tmp/pip-ephem-wheel-cache-cqof5bth/wheels/20/6d/67/e3f70547d4a1a84111f0c01bf422fd4817ee675985022e52cc 2023-10-24T17:56:18,423 Successfully built bluepyemodel 2023-10-24T17:56:18,736 Removed build tracker: '/tmp/pip-build-tracker-4lli4gyy'