2023-10-25T16:35:58,351 Created temporary directory: /tmp/pip-build-tracker-bf9bmhkk 2023-10-25T16:35:58,353 Initialized build tracking at /tmp/pip-build-tracker-bf9bmhkk 2023-10-25T16:35:58,353 Created build tracker: /tmp/pip-build-tracker-bf9bmhkk 2023-10-25T16:35:58,354 Entered build tracker: /tmp/pip-build-tracker-bf9bmhkk 2023-10-25T16:35:58,354 Created temporary directory: /tmp/pip-wheel-zcs1082w 2023-10-25T16:35:58,358 Created temporary directory: /tmp/pip-ephem-wheel-cache-ui1uojqz 2023-10-25T16:35:58,379 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-10-25T16:35:58,383 2 location(s) to search for versions of bluepyemodel: 2023-10-25T16:35:58,383 * https://pypi.org/simple/bluepyemodel/ 2023-10-25T16:35:58,383 * https://www.piwheels.org/simple/bluepyemodel/ 2023-10-25T16:35:58,384 Fetching project page and analyzing links: https://pypi.org/simple/bluepyemodel/ 2023-10-25T16:35:58,385 Getting page https://pypi.org/simple/bluepyemodel/ 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https://www.piwheels.org/simple/bluepyemodel/bluepyemodel-0.0.17-py3-none-any.whl#sha256=75abc5c8573218e8036c6e4bf436fa090d127a7e30d853310c7134eeac3ba6e8 (from https://www.piwheels.org/simple/bluepyemodel/) 2023-10-25T16:35:58,940 Skipping link: No binaries permitted for bluepyemodel: https://www.piwheels.org/simple/bluepyemodel/bluepyemodel-0.0.16-py3-none-any.whl#sha256=1320b98733e0bc6ad9ce13b5dd897b4bc81267c1b828fb41ef6efc85571130d0 (from https://www.piwheels.org/simple/bluepyemodel/) 2023-10-25T16:35:58,940 Skipping link: not a file: https://www.piwheels.org/simple/bluepyemodel/ 2023-10-25T16:35:58,941 Skipping link: not a file: https://pypi.org/simple/bluepyemodel/ 2023-10-25T16:35:58,965 Given no hashes to check 1 links for project 'bluepyemodel': discarding no candidates 2023-10-25T16:35:58,983 Collecting bluepyemodel==0.0.55 2023-10-25T16:35:58,986 Created temporary directory: /tmp/pip-unpack-2zei6l4p 2023-10-25T16:35:59,230 Downloading bluepyemodel-0.0.55.tar.gz (13.0 MB) 2023-10-25T16:36:03,829 Added bluepyemodel==0.0.55 from https://files.pythonhosted.org/packages/06/c2/0600b4a7b644483b821abcc4065a46c4b623c6ea8cfd1d335ce54070f37c/bluepyemodel-0.0.55.tar.gz to build tracker '/tmp/pip-build-tracker-bf9bmhkk' 2023-10-25T16:36:03,831 Running setup.py (path:/tmp/pip-wheel-zcs1082w/bluepyemodel_a78de7c8da3e4e89bacfcfa939ac800f/setup.py) egg_info for package bluepyemodel 2023-10-25T16:36:03,832 Created temporary directory: /tmp/pip-pip-egg-info-sit_f35g 2023-10-25T16:36:03,832 Preparing metadata (setup.py): started 2023-10-25T16:36:03,834 Running command python setup.py egg_info 2023-10-25T16:36:04,247 /tmp/pip-wheel-zcs1082w/bluepyemodel_a78de7c8da3e4e89bacfcfa939ac800f/setup.py:19: DeprecationWarning: the imp module is deprecated in favour of importlib and slated for removal in Python 3.12; see the module's documentation for alternative uses 2023-10-25T16:36:04,247 import imp 2023-10-25T16:36:04,538 /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:80: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2023-10-25T16:36:04,539 !! 2023-10-25T16:36:04,540 ******************************************************************************** 2023-10-25T16:36:04,541 Requirements should be satisfied by a PEP 517 installer. 2023-10-25T16:36:04,541 If you are using pip, you can try `pip install --use-pep517`. 2023-10-25T16:36:04,542 ******************************************************************************** 2023-10-25T16:36:04,543 !! 2023-10-25T16:36:04,544 dist.fetch_build_eggs(dist.setup_requires) 2023-10-25T16:36:07,717 WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' 2023-10-25T16:36:07,827 running egg_info 2023-10-25T16:36:07,829 creating /tmp/pip-pip-egg-info-sit_f35g/bluepyemodel.egg-info 2023-10-25T16:36:07,856 writing /tmp/pip-pip-egg-info-sit_f35g/bluepyemodel.egg-info/PKG-INFO 2023-10-25T16:36:07,865 writing dependency_links to /tmp/pip-pip-egg-info-sit_f35g/bluepyemodel.egg-info/dependency_links.txt 2023-10-25T16:36:07,870 writing requirements to /tmp/pip-pip-egg-info-sit_f35g/bluepyemodel.egg-info/requires.txt 2023-10-25T16:36:07,871 writing top-level names to /tmp/pip-pip-egg-info-sit_f35g/bluepyemodel.egg-info/top_level.txt 2023-10-25T16:36:07,873 writing manifest file '/tmp/pip-pip-egg-info-sit_f35g/bluepyemodel.egg-info/SOURCES.txt' 2023-10-25T16:36:08,061 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2023-10-25T16:36:08,068 reading manifest file '/tmp/pip-pip-egg-info-sit_f35g/bluepyemodel.egg-info/SOURCES.txt' 2023-10-25T16:36:08,069 reading manifest template 'MANIFEST.in' 2023-10-25T16:36:08,070 adding license file 'LICENSE.txt' 2023-10-25T16:36:08,071 adding license file 'COPYING' 2023-10-25T16:36:08,072 adding license file 'AUTHORS.txt' 2023-10-25T16:36:08,075 writing manifest file '/tmp/pip-pip-egg-info-sit_f35g/bluepyemodel.egg-info/SOURCES.txt' 2023-10-25T16:36:08,192 Preparing metadata (setup.py): finished with status 'done' 2023-10-25T16:36:08,196 Source in /tmp/pip-wheel-zcs1082w/bluepyemodel_a78de7c8da3e4e89bacfcfa939ac800f has version 0.0.55, which satisfies requirement bluepyemodel==0.0.55 from https://files.pythonhosted.org/packages/06/c2/0600b4a7b644483b821abcc4065a46c4b623c6ea8cfd1d335ce54070f37c/bluepyemodel-0.0.55.tar.gz 2023-10-25T16:36:08,198 Removed bluepyemodel==0.0.55 from https://files.pythonhosted.org/packages/06/c2/0600b4a7b644483b821abcc4065a46c4b623c6ea8cfd1d335ce54070f37c/bluepyemodel-0.0.55.tar.gz from build tracker '/tmp/pip-build-tracker-bf9bmhkk' 2023-10-25T16:36:08,204 Created temporary directory: /tmp/pip-unpack-0pceogkd 2023-10-25T16:36:08,205 Created temporary directory: /tmp/pip-unpack-oixyc18a 2023-10-25T16:36:08,265 Building wheels for collected packages: bluepyemodel 2023-10-25T16:36:08,270 Created temporary directory: /tmp/pip-wheel-d6f4pdyv 2023-10-25T16:36:08,271 Building wheel for bluepyemodel (setup.py): started 2023-10-25T16:36:08,273 Destination directory: /tmp/pip-wheel-d6f4pdyv 2023-10-25T16:36:08,273 Running command python setup.py bdist_wheel 2023-10-25T16:36:08,685 /tmp/pip-wheel-zcs1082w/bluepyemodel_a78de7c8da3e4e89bacfcfa939ac800f/setup.py:19: DeprecationWarning: the imp module is deprecated in favour of importlib and slated for removal in Python 3.12; see the module's documentation for alternative uses 2023-10-25T16:36:08,685 import imp 2023-10-25T16:36:08,978 /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:80: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2023-10-25T16:36:08,979 !! 2023-10-25T16:36:08,980 ******************************************************************************** 2023-10-25T16:36:08,980 Requirements should be satisfied by a PEP 517 installer. 2023-10-25T16:36:08,981 If you are using pip, you can try `pip install --use-pep517`. 2023-10-25T16:36:08,982 ******************************************************************************** 2023-10-25T16:36:08,983 !! 2023-10-25T16:36:08,983 dist.fetch_build_eggs(dist.setup_requires) 2023-10-25T16:36:09,520 WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' 2023-10-25T16:36:09,618 running bdist_wheel 2023-10-25T16:36:09,723 running build 2023-10-25T16:36:09,723 running build_py 2023-10-25T16:36:09,753 creating build 2023-10-25T16:36:09,754 creating build/lib 2023-10-25T16:36:09,755 creating build/lib/bluepyemodel 2023-10-25T16:36:09,757 copying bluepyemodel/__init__.py -> build/lib/bluepyemodel 2023-10-25T16:36:09,759 creating build/lib/tests 2023-10-25T16:36:09,760 copying tests/__init__.py -> build/lib/tests 2023-10-25T16:36:09,762 creating build/lib/bluepyemodel/export_emodel 2023-10-25T16:36:09,763 copying bluepyemodel/export_emodel/__init__.py -> build/lib/bluepyemodel/export_emodel 2023-10-25T16:36:09,765 copying bluepyemodel/export_emodel/utils.py -> build/lib/bluepyemodel/export_emodel 2023-10-25T16:36:09,766 copying bluepyemodel/export_emodel/export_emodel.py -> build/lib/bluepyemodel/export_emodel 2023-10-25T16:36:09,769 creating build/lib/bluepyemodel/optimisation 2023-10-25T16:36:09,770 copying bluepyemodel/optimisation/__init__.py -> build/lib/bluepyemodel/optimisation 2023-10-25T16:36:09,772 copying bluepyemodel/optimisation/optimisation.py -> build/lib/bluepyemodel/optimisation 2023-10-25T16:36:09,775 creating build/lib/bluepyemodel/emodel_pipeline 2023-10-25T16:36:09,776 copying bluepyemodel/emodel_pipeline/__init__.py -> build/lib/bluepyemodel/emodel_pipeline 2023-10-25T16:36:09,778 copying bluepyemodel/emodel_pipeline/plotting.py -> build/lib/bluepyemodel/emodel_pipeline 2023-10-25T16:36:09,781 copying bluepyemodel/emodel_pipeline/emodel_settings.py -> build/lib/bluepyemodel/emodel_pipeline 2023-10-25T16:36:09,783 copying bluepyemodel/emodel_pipeline/emodel_pipeline.py -> build/lib/bluepyemodel/emodel_pipeline 2023-10-25T16:36:09,786 copying bluepyemodel/emodel_pipeline/emodel_workflow.py -> build/lib/bluepyemodel/emodel_pipeline 2023-10-25T16:36:09,787 copying bluepyemodel/emodel_pipeline/emodel.py -> build/lib/bluepyemodel/emodel_pipeline 2023-10-25T16:36:09,790 copying bluepyemodel/emodel_pipeline/emodel_script.py -> build/lib/bluepyemodel/emodel_pipeline 2023-10-25T16:36:09,791 copying bluepyemodel/emodel_pipeline/emodel_metadata.py -> build/lib/bluepyemodel/emodel_pipeline 2023-10-25T16:36:09,794 creating build/lib/bluepyemodel/tools 2023-10-25T16:36:09,795 copying bluepyemodel/tools/morphology.py -> build/lib/bluepyemodel/tools 2023-10-25T16:36:09,797 copying bluepyemodel/tools/__init__.py -> build/lib/bluepyemodel/tools 2023-10-25T16:36:09,799 copying bluepyemodel/tools/utils.py -> build/lib/bluepyemodel/tools 2023-10-25T16:36:09,801 copying bluepyemodel/tools/mechanisms.py -> build/lib/bluepyemodel/tools 2023-10-25T16:36:09,803 copying bluepyemodel/tools/multiprocessing.py -> build/lib/bluepyemodel/tools 2023-10-25T16:36:09,805 copying bluepyemodel/tools/search_pdfs.py -> build/lib/bluepyemodel/tools 2023-10-25T16:36:09,807 creating build/lib/bluepyemodel/evaluation 2023-10-25T16:36:09,808 copying bluepyemodel/evaluation/modifiers.py -> build/lib/bluepyemodel/evaluation 2023-10-25T16:36:09,811 copying bluepyemodel/evaluation/__init__.py -> build/lib/bluepyemodel/evaluation 2023-10-25T16:36:09,812 copying bluepyemodel/evaluation/evaluator.py -> build/lib/bluepyemodel/evaluation 2023-10-25T16:36:09,815 copying bluepyemodel/evaluation/recordings.py -> build/lib/bluepyemodel/evaluation 2023-10-25T16:36:09,817 copying bluepyemodel/evaluation/protocol_configuration.py -> build/lib/bluepyemodel/evaluation 2023-10-25T16:36:09,820 copying bluepyemodel/evaluation/efel_feature_bpem.py -> build/lib/bluepyemodel/evaluation 2023-10-25T16:36:09,822 copying bluepyemodel/evaluation/fitness_calculator_configuration.py -> build/lib/bluepyemodel/evaluation 2023-10-25T16:36:09,824 copying bluepyemodel/evaluation/evaluation.py -> build/lib/bluepyemodel/evaluation 2023-10-25T16:36:09,827 copying bluepyemodel/evaluation/protocols.py -> build/lib/bluepyemodel/evaluation 2023-10-25T16:36:09,830 copying bluepyemodel/evaluation/efeature_configuration.py -> build/lib/bluepyemodel/evaluation 2023-10-25T16:36:09,832 creating build/lib/bluepyemodel/model 2023-10-25T16:36:09,833 copying bluepyemodel/model/__init__.py -> build/lib/bluepyemodel/model 2023-10-25T16:36:09,835 copying bluepyemodel/model/neuron_model_configuration.py -> build/lib/bluepyemodel/model 2023-10-25T16:36:09,838 copying bluepyemodel/model/utils.py -> build/lib/bluepyemodel/model 2023-10-25T16:36:09,840 copying bluepyemodel/model/distribution_configuration.py -> build/lib/bluepyemodel/model 2023-10-25T16:36:09,842 copying bluepyemodel/model/parameter_configuration.py -> build/lib/bluepyemodel/model 2023-10-25T16:36:09,844 copying bluepyemodel/model/model.py -> build/lib/bluepyemodel/model 2023-10-25T16:36:09,846 copying bluepyemodel/model/model_configurator.py -> build/lib/bluepyemodel/model 2023-10-25T16:36:09,848 copying bluepyemodel/model/morphology_configuration.py -> build/lib/bluepyemodel/model 2023-10-25T16:36:09,850 copying bluepyemodel/model/model_configuration.py -> build/lib/bluepyemodel/model 2023-10-25T16:36:09,852 copying bluepyemodel/model/mechanism_configuration.py -> build/lib/bluepyemodel/model 2023-10-25T16:36:09,854 creating build/lib/bluepyemodel/validation 2023-10-25T16:36:09,855 copying bluepyemodel/validation/__init__.py -> build/lib/bluepyemodel/validation 2023-10-25T16:36:09,857 copying bluepyemodel/validation/validation.py -> build/lib/bluepyemodel/validation 2023-10-25T16:36:09,860 copying bluepyemodel/validation/validation_functions.py -> build/lib/bluepyemodel/validation 2023-10-25T16:36:09,862 creating build/lib/bluepyemodel/access_point 2023-10-25T16:36:09,863 copying bluepyemodel/access_point/__init__.py -> build/lib/bluepyemodel/access_point 2023-10-25T16:36:09,866 copying bluepyemodel/access_point/access_point.py -> build/lib/bluepyemodel/access_point 2023-10-25T16:36:09,868 copying bluepyemodel/access_point/local.py -> build/lib/bluepyemodel/access_point 2023-10-25T16:36:09,872 creating build/lib/bluepyemodel/ecode 2023-10-25T16:36:09,873 copying bluepyemodel/ecode/__init__.py -> build/lib/bluepyemodel/ecode 2023-10-25T16:36:09,875 copying bluepyemodel/ecode/firepattern.py -> build/lib/bluepyemodel/ecode 2023-10-25T16:36:09,877 copying bluepyemodel/ecode/poscheops.py -> build/lib/bluepyemodel/ecode 2023-10-25T16:36:09,879 copying bluepyemodel/ecode/random_square_inputs.py -> build/lib/bluepyemodel/ecode 2023-10-25T16:36:09,881 copying bluepyemodel/ecode/ramp.py -> build/lib/bluepyemodel/ecode 2023-10-25T16:36:09,884 copying bluepyemodel/ecode/apwaveform.py -> build/lib/bluepyemodel/ecode 2023-10-25T16:36:09,885 copying bluepyemodel/ecode/dendrite.py -> build/lib/bluepyemodel/ecode 2023-10-25T16:36:09,888 copying bluepyemodel/ecode/sinespec.py -> build/lib/bluepyemodel/ecode 2023-10-25T16:36:09,889 copying bluepyemodel/ecode/idrest.py -> build/lib/bluepyemodel/ecode 2023-10-25T16:36:09,892 copying bluepyemodel/ecode/comb.py -> build/lib/bluepyemodel/ecode 2023-10-25T16:36:09,894 copying bluepyemodel/ecode/probampanmda_ems.py -> build/lib/bluepyemodel/ecode 2023-10-25T16:36:09,896 copying bluepyemodel/ecode/stimulus.py -> build/lib/bluepyemodel/ecode 2023-10-25T16:36:09,897 copying bluepyemodel/ecode/hyperdepol.py -> build/lib/bluepyemodel/ecode 2023-10-25T16:36:09,899 copying bluepyemodel/ecode/sahp.py -> build/lib/bluepyemodel/ecode 2023-10-25T16:36:09,902 copying bluepyemodel/ecode/iv.py -> build/lib/bluepyemodel/ecode 2023-10-25T16:36:09,903 copying bluepyemodel/ecode/whitenoise.py -> build/lib/bluepyemodel/ecode 2023-10-25T16:36:09,905 copying bluepyemodel/ecode/subwhitenoise.py -> build/lib/bluepyemodel/ecode 2023-10-25T16:36:09,907 copying bluepyemodel/ecode/noise.py -> build/lib/bluepyemodel/ecode 2023-10-25T16:36:09,909 copying bluepyemodel/ecode/spikerec.py -> build/lib/bluepyemodel/ecode 2023-10-25T16:36:09,911 copying bluepyemodel/ecode/customfromfile.py -> build/lib/bluepyemodel/ecode 2023-10-25T16:36:09,913 copying bluepyemodel/ecode/noiseou3.py -> build/lib/bluepyemodel/ecode 2023-10-25T16:36:09,915 copying bluepyemodel/ecode/dehyperpol.py -> build/lib/bluepyemodel/ecode 2023-10-25T16:36:09,917 copying bluepyemodel/ecode/negcheops.py -> build/lib/bluepyemodel/ecode 2023-10-25T16:36:09,920 creating build/lib/bluepyemodel/tasks 2023-10-25T16:36:09,921 copying bluepyemodel/tasks/__init__.py -> build/lib/bluepyemodel/tasks 2023-10-25T16:36:09,923 copying bluepyemodel/tasks/luigi_tools.py -> build/lib/bluepyemodel/tasks 2023-10-25T16:36:09,925 copying bluepyemodel/tasks/config.py -> build/lib/bluepyemodel/tasks 2023-10-25T16:36:09,927 copying bluepyemodel/tasks/luigi_custom.py -> build/lib/bluepyemodel/tasks 2023-10-25T16:36:09,929 creating build/lib/bluepyemodel/efeatures_extraction 2023-10-25T16:36:09,930 copying bluepyemodel/efeatures_extraction/__init__.py -> build/lib/bluepyemodel/efeatures_extraction 2023-10-25T16:36:09,932 copying bluepyemodel/efeatures_extraction/efeatures_extraction.py -> build/lib/bluepyemodel/efeatures_extraction 2023-10-25T16:36:09,934 copying bluepyemodel/efeatures_extraction/auto_targets.py -> build/lib/bluepyemodel/efeatures_extraction 2023-10-25T16:36:09,936 copying bluepyemodel/efeatures_extraction/trace_file.py -> build/lib/bluepyemodel/efeatures_extraction 2023-10-25T16:36:09,938 copying bluepyemodel/efeatures_extraction/targets_configuration.py -> build/lib/bluepyemodel/efeatures_extraction 2023-10-25T16:36:09,940 copying bluepyemodel/efeatures_extraction/targets_configurator.py -> build/lib/bluepyemodel/efeatures_extraction 2023-10-25T16:36:09,942 copying bluepyemodel/efeatures_extraction/target.py -> build/lib/bluepyemodel/efeatures_extraction 2023-10-25T16:36:09,945 creating build/lib/bluepyemodel/tasks/emodel_creation 2023-10-25T16:36:09,946 copying bluepyemodel/tasks/emodel_creation/__init__.py -> build/lib/bluepyemodel/tasks/emodel_creation 2023-10-25T16:36:09,948 copying bluepyemodel/tasks/emodel_creation/optimisation.py -> build/lib/bluepyemodel/tasks/emodel_creation 2023-10-25T16:36:09,951 creating build/lib/tests/test_models 2023-10-25T16:36:09,952 copying tests/test_models/__init__.py -> build/lib/tests/test_models 2023-10-25T16:36:09,954 copying tests/test_models/dummycells.py -> build/lib/tests/test_models 2023-10-25T16:36:09,956 creating build/lib/tests/functional_tests 2023-10-25T16:36:09,958 copying tests/functional_tests/__init__.py -> build/lib/tests/functional_tests 2023-10-25T16:36:09,959 copying tests/functional_tests/test_protocols.py -> build/lib/tests/functional_tests 2023-10-25T16:36:09,961 copying tests/functional_tests/test_validation.py -> build/lib/tests/functional_tests 2023-10-25T16:36:09,964 creating build/lib/tests/unit_tests 2023-10-25T16:36:09,965 copying tests/unit_tests/__init__.py -> build/lib/tests/unit_tests 2023-10-25T16:36:09,966 copying tests/unit_tests/test_validation_functions.py -> build/lib/tests/unit_tests 2023-10-25T16:36:09,968 copying tests/unit_tests/test_model_parameters_configuration.py -> build/lib/tests/unit_tests 2023-10-25T16:36:09,970 copying tests/unit_tests/test_emodel_pipeline.py -> build/lib/tests/unit_tests 2023-10-25T16:36:09,972 copying tests/unit_tests/test_ecodes.py -> build/lib/tests/unit_tests 2023-10-25T16:36:09,975 copying tests/unit_tests/test_local_access_point.py -> build/lib/tests/unit_tests 2023-10-25T16:36:09,977 copying tests/unit_tests/test_tools.py -> build/lib/tests/unit_tests 2023-10-25T16:36:09,978 copying tests/unit_tests/test_optimisation.py -> build/lib/tests/unit_tests 2023-10-25T16:36:09,980 copying tests/unit_tests/test_plotting.py -> build/lib/tests/unit_tests 2023-10-25T16:36:09,982 copying tests/unit_tests/test_evaluator.py -> build/lib/tests/unit_tests 2023-10-25T16:36:09,984 copying tests/unit_tests/test_emodelmetadata.py -> build/lib/tests/unit_tests 2023-10-25T16:36:09,987 copying tests/unit_tests/test_model.py -> build/lib/tests/unit_tests 2023-10-25T16:36:09,988 copying tests/unit_tests/test_fitness_calculator_configuration.py -> build/lib/tests/unit_tests 2023-10-25T16:36:09,991 copying tests/unit_tests/test_targets_configuration.py -> build/lib/tests/unit_tests 2023-10-25T16:36:09,993 running egg_info 2023-10-25T16:36:10,049 writing bluepyemodel.egg-info/PKG-INFO 2023-10-25T16:36:10,061 writing dependency_links to bluepyemodel.egg-info/dependency_links.txt 2023-10-25T16:36:10,066 writing requirements to bluepyemodel.egg-info/requires.txt 2023-10-25T16:36:10,067 writing top-level names to bluepyemodel.egg-info/top_level.txt 2023-10-25T16:36:10,171 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2023-10-25T16:36:10,175 reading manifest file 'bluepyemodel.egg-info/SOURCES.txt' 2023-10-25T16:36:10,194 reading manifest template 'MANIFEST.in' 2023-10-25T16:36:10,195 adding license file 'LICENSE.txt' 2023-10-25T16:36:10,196 adding license file 'COPYING' 2023-10-25T16:36:10,196 adding license file 'AUTHORS.txt' 2023-10-25T16:36:10,205 writing manifest file 'bluepyemodel.egg-info/SOURCES.txt' 2023-10-25T16:36:10,208 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bluepyemodel.ecode.data' is absent from the `packages` configuration. 2023-10-25T16:36:10,209 !! 2023-10-25T16:36:10,210 ******************************************************************************** 2023-10-25T16:36:10,210 ############################ 2023-10-25T16:36:10,211 # Package would be ignored # 2023-10-25T16:36:10,211 ############################ 2023-10-25T16:36:10,212 Python recognizes 'bluepyemodel.ecode.data' as an importable package[^1], 2023-10-25T16:36:10,212 but it is absent from setuptools' `packages` configuration. 2023-10-25T16:36:10,214 This leads to an ambiguous overall configuration. If you want to distribute this 2023-10-25T16:36:10,214 package, please make sure that 'bluepyemodel.ecode.data' is explicitly added 2023-10-25T16:36:10,215 to the `packages` configuration field. 2023-10-25T16:36:10,216 Alternatively, you can also rely on setuptools' discovery methods 2023-10-25T16:36:10,217 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-10-25T16:36:10,218 instead of `find_packages(...)`/`find:`). 2023-10-25T16:36:10,219 You can read more about "package discovery" on setuptools documentation page: 2023-10-25T16:36:10,220 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-10-25T16:36:10,221 If you don't want 'bluepyemodel.ecode.data' to be distributed and are 2023-10-25T16:36:10,221 already explicitly excluding 'bluepyemodel.ecode.data' via 2023-10-25T16:36:10,222 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-10-25T16:36:10,222 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-10-25T16:36:10,223 combination with a more fine grained `package-data` configuration. 2023-10-25T16:36:10,224 You can read more about "package data files" on setuptools documentation page: 2023-10-25T16:36:10,225 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-10-25T16:36:10,226 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-10-25T16:36:10,227 even if it does not contain any `.py` files. 2023-10-25T16:36:10,228 On the other hand, currently there is no concept of package data 2023-10-25T16:36:10,228 directory, all directories are treated like packages. 2023-10-25T16:36:10,229 ******************************************************************************** 2023-10-25T16:36:10,230 !! 2023-10-25T16:36:10,230 check.warn(importable) 2023-10-25T16:36:10,231 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bluepyemodel.export_emodel.templates' is absent from the `packages` configuration. 2023-10-25T16:36:10,232 !! 2023-10-25T16:36:10,233 ******************************************************************************** 2023-10-25T16:36:10,233 ############################ 2023-10-25T16:36:10,234 # Package would be ignored # 2023-10-25T16:36:10,234 ############################ 2023-10-25T16:36:10,235 Python recognizes 'bluepyemodel.export_emodel.templates' as an importable package[^1], 2023-10-25T16:36:10,236 but it is absent from setuptools' `packages` configuration. 2023-10-25T16:36:10,237 This leads to an ambiguous overall configuration. If you want to distribute this 2023-10-25T16:36:10,237 package, please make sure that 'bluepyemodel.export_emodel.templates' is explicitly added 2023-10-25T16:36:10,238 to the `packages` configuration field. 2023-10-25T16:36:10,239 Alternatively, you can also rely on setuptools' discovery methods 2023-10-25T16:36:10,240 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-10-25T16:36:10,240 instead of `find_packages(...)`/`find:`). 2023-10-25T16:36:10,241 You can read more about "package discovery" on setuptools documentation page: 2023-10-25T16:36:10,243 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-10-25T16:36:10,244 If you don't want 'bluepyemodel.export_emodel.templates' to be distributed and are 2023-10-25T16:36:10,244 already explicitly excluding 'bluepyemodel.export_emodel.templates' via 2023-10-25T16:36:10,245 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-10-25T16:36:10,246 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-10-25T16:36:10,246 combination with a more fine grained `package-data` configuration. 2023-10-25T16:36:10,247 You can read more about "package data files" on setuptools documentation page: 2023-10-25T16:36:10,249 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-10-25T16:36:10,250 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-10-25T16:36:10,251 even if it does not contain any `.py` files. 2023-10-25T16:36:10,252 On the other hand, currently there is no concept of package data 2023-10-25T16:36:10,252 directory, all directories are treated like packages. 2023-10-25T16:36:10,253 ******************************************************************************** 2023-10-25T16:36:10,255 !! 2023-10-25T16:36:10,255 check.warn(importable) 2023-10-25T16:36:10,256 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'tests.test_data' is absent from the `packages` configuration. 2023-10-25T16:36:10,257 !! 2023-10-25T16:36:10,258 ******************************************************************************** 2023-10-25T16:36:10,259 ############################ 2023-10-25T16:36:10,259 # Package would be ignored # 2023-10-25T16:36:10,260 ############################ 2023-10-25T16:36:10,260 Python recognizes 'tests.test_data' as an importable package[^1], 2023-10-25T16:36:10,261 but it is absent from setuptools' `packages` configuration. 2023-10-25T16:36:10,262 This leads to an ambiguous overall configuration. If you want to distribute this 2023-10-25T16:36:10,263 package, please make sure that 'tests.test_data' is explicitly added 2023-10-25T16:36:10,264 to the `packages` configuration field. 2023-10-25T16:36:10,266 Alternatively, you can also rely on setuptools' discovery methods 2023-10-25T16:36:10,266 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-10-25T16:36:10,267 instead of `find_packages(...)`/`find:`). 2023-10-25T16:36:10,268 You can read more about "package discovery" on setuptools documentation page: 2023-10-25T16:36:10,270 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-10-25T16:36:10,271 If you don't want 'tests.test_data' to be distributed and are 2023-10-25T16:36:10,272 already explicitly excluding 'tests.test_data' via 2023-10-25T16:36:10,272 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-10-25T16:36:10,273 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-10-25T16:36:10,274 combination with a more fine grained `package-data` configuration. 2023-10-25T16:36:10,275 You can read more about "package data files" on setuptools documentation page: 2023-10-25T16:36:10,276 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-10-25T16:36:10,278 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-10-25T16:36:10,278 even if it does not contain any `.py` files. 2023-10-25T16:36:10,279 On the other hand, currently there is no concept of package data 2023-10-25T16:36:10,280 directory, all directories are treated like packages. 2023-10-25T16:36:10,280 ******************************************************************************** 2023-10-25T16:36:10,282 !! 2023-10-25T16:36:10,282 check.warn(importable) 2023-10-25T16:36:10,283 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'tests.test_data.config' is absent from the `packages` configuration. 2023-10-25T16:36:10,283 !! 2023-10-25T16:36:10,285 ******************************************************************************** 2023-10-25T16:36:10,285 ############################ 2023-10-25T16:36:10,286 # Package would be ignored # 2023-10-25T16:36:10,287 ############################ 2023-10-25T16:36:10,288 Python recognizes 'tests.test_data.config' as an importable package[^1], 2023-10-25T16:36:10,288 but it is absent from setuptools' `packages` configuration. 2023-10-25T16:36:10,289 This leads to an ambiguous overall configuration. If you want to distribute this 2023-10-25T16:36:10,290 package, please make sure that 'tests.test_data.config' is explicitly added 2023-10-25T16:36:10,291 to the `packages` configuration field. 2023-10-25T16:36:10,292 Alternatively, you can also rely on setuptools' discovery methods 2023-10-25T16:36:10,293 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-10-25T16:36:10,294 instead of `find_packages(...)`/`find:`). 2023-10-25T16:36:10,295 You can read more about "package discovery" on setuptools documentation page: 2023-10-25T16:36:10,296 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-10-25T16:36:10,297 If you don't want 'tests.test_data.config' to be distributed and are 2023-10-25T16:36:10,297 already explicitly excluding 'tests.test_data.config' via 2023-10-25T16:36:10,298 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-10-25T16:36:10,298 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-10-25T16:36:10,299 combination with a more fine grained `package-data` configuration. 2023-10-25T16:36:10,300 You can read more about "package data files" on setuptools documentation page: 2023-10-25T16:36:10,301 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-10-25T16:36:10,303 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-10-25T16:36:10,303 even if it does not contain any `.py` files. 2023-10-25T16:36:10,304 On the other hand, currently there is no concept of package data 2023-10-25T16:36:10,304 directory, all directories are treated like packages. 2023-10-25T16:36:10,305 ******************************************************************************** 2023-10-25T16:36:10,306 !! 2023-10-25T16:36:10,307 check.warn(importable) 2023-10-25T16:36:10,307 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'tests.test_data.ephys_data' is absent from the `packages` configuration. 2023-10-25T16:36:10,308 !! 2023-10-25T16:36:10,309 ******************************************************************************** 2023-10-25T16:36:10,310 ############################ 2023-10-25T16:36:10,311 # Package would be ignored # 2023-10-25T16:36:10,311 ############################ 2023-10-25T16:36:10,312 Python recognizes 'tests.test_data.ephys_data' as an importable package[^1], 2023-10-25T16:36:10,313 but it is absent from setuptools' `packages` configuration. 2023-10-25T16:36:10,315 This leads to an ambiguous overall configuration. If you want to distribute this 2023-10-25T16:36:10,315 package, please make sure that 'tests.test_data.ephys_data' is explicitly added 2023-10-25T16:36:10,316 to the `packages` configuration field. 2023-10-25T16:36:10,317 Alternatively, you can also rely on setuptools' discovery methods 2023-10-25T16:36:10,318 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-10-25T16:36:10,318 instead of `find_packages(...)`/`find:`). 2023-10-25T16:36:10,320 You can read more about "package discovery" on setuptools documentation page: 2023-10-25T16:36:10,321 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-10-25T16:36:10,322 If you don't want 'tests.test_data.ephys_data' to be distributed and are 2023-10-25T16:36:10,323 already explicitly excluding 'tests.test_data.ephys_data' via 2023-10-25T16:36:10,324 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-10-25T16:36:10,324 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-10-25T16:36:10,325 combination with a more fine grained `package-data` configuration. 2023-10-25T16:36:10,326 You can read more about "package data files" on setuptools documentation page: 2023-10-25T16:36:10,327 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-10-25T16:36:10,329 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-10-25T16:36:10,329 even if it does not contain any `.py` files. 2023-10-25T16:36:10,330 On the other hand, currently there is no concept of package data 2023-10-25T16:36:10,331 directory, all directories are treated like packages. 2023-10-25T16:36:10,331 ******************************************************************************** 2023-10-25T16:36:10,332 !! 2023-10-25T16:36:10,333 check.warn(importable) 2023-10-25T16:36:10,333 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'tests.test_data.mechanisms' is absent from the `packages` configuration. 2023-10-25T16:36:10,334 !! 2023-10-25T16:36:10,335 ******************************************************************************** 2023-10-25T16:36:10,335 ############################ 2023-10-25T16:36:10,336 # Package would be ignored # 2023-10-25T16:36:10,336 ############################ 2023-10-25T16:36:10,337 Python recognizes 'tests.test_data.mechanisms' as an importable package[^1], 2023-10-25T16:36:10,337 but it is absent from setuptools' `packages` configuration. 2023-10-25T16:36:10,338 This leads to an ambiguous overall configuration. If you want to distribute this 2023-10-25T16:36:10,338 package, please make sure that 'tests.test_data.mechanisms' is explicitly added 2023-10-25T16:36:10,339 to the `packages` configuration field. 2023-10-25T16:36:10,340 Alternatively, you can also rely on setuptools' discovery methods 2023-10-25T16:36:10,341 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-10-25T16:36:10,341 instead of `find_packages(...)`/`find:`). 2023-10-25T16:36:10,343 You can read more about "package discovery" on setuptools documentation page: 2023-10-25T16:36:10,344 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-10-25T16:36:10,346 If you don't want 'tests.test_data.mechanisms' to be distributed and are 2023-10-25T16:36:10,346 already explicitly excluding 'tests.test_data.mechanisms' via 2023-10-25T16:36:10,347 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-10-25T16:36:10,348 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-10-25T16:36:10,348 combination with a more fine grained `package-data` configuration. 2023-10-25T16:36:10,350 You can read more about "package data files" on setuptools documentation page: 2023-10-25T16:36:10,351 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-10-25T16:36:10,353 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-10-25T16:36:10,354 even if it does not contain any `.py` files. 2023-10-25T16:36:10,354 On the other hand, currently there is no concept of package data 2023-10-25T16:36:10,356 directory, all directories are treated like packages. 2023-10-25T16:36:10,364 ******************************************************************************** 2023-10-25T16:36:10,393 !! 2023-10-25T16:36:10,407 check.warn(importable) 2023-10-25T16:36:10,409 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'tests.test_data.morphology' is absent from the `packages` configuration. 2023-10-25T16:36:10,410 !! 2023-10-25T16:36:10,411 ******************************************************************************** 2023-10-25T16:36:10,411 ############################ 2023-10-25T16:36:10,412 # Package would be ignored # 2023-10-25T16:36:10,413 ############################ 2023-10-25T16:36:10,413 Python recognizes 'tests.test_data.morphology' as an importable package[^1], 2023-10-25T16:36:10,414 but it is absent from setuptools' `packages` configuration. 2023-10-25T16:36:10,414 This leads to an ambiguous overall configuration. If you want to distribute this 2023-10-25T16:36:10,415 package, please make sure that 'tests.test_data.morphology' is explicitly added 2023-10-25T16:36:10,415 to the `packages` configuration field. 2023-10-25T16:36:10,416 Alternatively, you can also rely on setuptools' discovery methods 2023-10-25T16:36:10,416 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-10-25T16:36:10,417 instead of `find_packages(...)`/`find:`). 2023-10-25T16:36:10,418 You can read more about "package discovery" on setuptools documentation page: 2023-10-25T16:36:10,419 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-10-25T16:36:10,419 If you don't want 'tests.test_data.morphology' to be distributed and are 2023-10-25T16:36:10,420 already explicitly excluding 'tests.test_data.morphology' via 2023-10-25T16:36:10,420 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-10-25T16:36:10,421 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-10-25T16:36:10,421 combination with a more fine grained `package-data` configuration. 2023-10-25T16:36:10,422 You can read more about "package data files" on setuptools documentation page: 2023-10-25T16:36:10,423 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-10-25T16:36:10,424 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-10-25T16:36:10,425 even if it does not contain any `.py` files. 2023-10-25T16:36:10,425 On the other hand, currently there is no concept of package data 2023-10-25T16:36:10,426 directory, all directories are treated like packages. 2023-10-25T16:36:10,426 ******************************************************************************** 2023-10-25T16:36:10,427 !! 2023-10-25T16:36:10,428 check.warn(importable) 2023-10-25T16:36:10,428 creating build/lib/tests/test_data 2023-10-25T16:36:10,429 copying tests/test_data/final.json -> build/lib/tests/test_data 2023-10-25T16:36:10,430 copying tests/test_data/final_tmp.json -> build/lib/tests/test_data 2023-10-25T16:36:10,430 copying tests/test_data/test_APWaveform_320.soma.v.csv -> build/lib/tests/test_data 2023-10-25T16:36:10,431 copying tests/test_data/test_IV_-100.soma.v.csv -> build/lib/tests/test_data 2023-10-25T16:36:10,431 copying tests/test_data/test_RMPProtocol.soma.v.csv -> build/lib/tests/test_data 2023-10-25T16:36:10,432 copying tests/test_data/test_RinProtocol.soma.v.csv -> build/lib/tests/test_data 2023-10-25T16:36:10,432 copying tests/test_data/test_SpikeRec_600.soma.v.csv -> build/lib/tests/test_data 2023-10-25T16:36:10,433 copying tests/test_data/test_Step_200.soma.v.csv -> build/lib/tests/test_data 2023-10-25T16:36:10,433 copying tests/test_data/test_Step_280.soma.v.csv -> build/lib/tests/test_data 2023-10-25T16:36:10,434 copying tests/test_data/test_bAP.ca_ais.cai.csv -> build/lib/tests/test_data 2023-10-25T16:36:10,434 copying tests/test_data/test_bAP.ca_prox_apic.cai.csv -> build/lib/tests/test_data 2023-10-25T16:36:10,435 copying tests/test_data/test_bAP.ca_prox_basal.cai.csv -> build/lib/tests/test_data 2023-10-25T16:36:10,436 copying tests/test_data/test_bAP.ca_soma.cai.csv -> build/lib/tests/test_data 2023-10-25T16:36:10,436 copying tests/test_data/test_bAP.dend1.v.csv -> build/lib/tests/test_data 2023-10-25T16:36:10,437 copying tests/test_data/test_bAP.dend2.v.csv -> build/lib/tests/test_data 2023-10-25T16:36:10,437 copying tests/test_data/test_bAP.soma.v.csv -> build/lib/tests/test_data 2023-10-25T16:36:10,438 copying tests/test_data/test_features.json -> build/lib/tests/test_data 2023-10-25T16:36:10,439 copying tests/test_data/test_mechanisms.json -> build/lib/tests/test_data 2023-10-25T16:36:10,439 copying tests/test_data/test_parameters.json -> build/lib/tests/test_data 2023-10-25T16:36:10,440 copying tests/test_data/test_protocols.json -> build/lib/tests/test_data 2023-10-25T16:36:10,442 copying tests/test_data/test_recipes.json -> build/lib/tests/test_data 2023-10-25T16:36:10,443 creating build/lib/tests/test_data/config 2023-10-25T16:36:10,444 copying tests/test_data/config/config_dict.json -> build/lib/tests/test_data/config 2023-10-25T16:36:10,446 copying tests/test_data/config/features.json -> build/lib/tests/test_data/config 2023-10-25T16:36:10,447 copying tests/test_data/config/params.json -> build/lib/tests/test_data/config 2023-10-25T16:36:10,447 copying tests/test_data/config/params_restart.json -> build/lib/tests/test_data/config 2023-10-25T16:36:10,448 copying tests/test_data/config/protocols.json -> build/lib/tests/test_data/config 2023-10-25T16:36:10,448 copying tests/test_data/config/recipes.json -> build/lib/tests/test_data/config 2023-10-25T16:36:10,449 copying tests/test_data/config/recipes_restart.json -> build/lib/tests/test_data/config 2023-10-25T16:36:10,449 creating build/lib/tests/test_data/ephys_data 2023-10-25T16:36:10,450 copying tests/test_data/ephys_data/C010600C1-MT-C1.nwb -> build/lib/tests/test_data/ephys_data 2023-10-25T16:36:10,450 creating build/lib/tests/test_data/mechanisms 2023-10-25T16:36:10,451 copying tests/test_data/mechanisms/CaDynamics_DC0.mod -> build/lib/tests/test_data/mechanisms 2023-10-25T16:36:10,451 copying tests/test_data/mechanisms/Ca_HVA2.mod -> build/lib/tests/test_data/mechanisms 2023-10-25T16:36:10,452 copying tests/test_data/mechanisms/Ca_LVAst.mod -> build/lib/tests/test_data/mechanisms 2023-10-25T16:36:10,453 copying tests/test_data/mechanisms/Ih.mod -> build/lib/tests/test_data/mechanisms 2023-10-25T16:36:10,454 copying tests/test_data/mechanisms/K_Pst.mod -> build/lib/tests/test_data/mechanisms 2023-10-25T16:36:10,454 copying tests/test_data/mechanisms/K_Tst.mod -> build/lib/tests/test_data/mechanisms 2023-10-25T16:36:10,455 copying tests/test_data/mechanisms/NaTg.mod -> build/lib/tests/test_data/mechanisms 2023-10-25T16:36:10,455 copying tests/test_data/mechanisms/Nap_Et2.mod -> build/lib/tests/test_data/mechanisms 2023-10-25T16:36:10,455 copying tests/test_data/mechanisms/SK_E2.mod -> build/lib/tests/test_data/mechanisms 2023-10-25T16:36:10,456 copying tests/test_data/mechanisms/SKv3_1.mod -> build/lib/tests/test_data/mechanisms 2023-10-25T16:36:10,457 creating build/lib/tests/test_data/morphology 2023-10-25T16:36:10,457 copying tests/test_data/morphology/C060114A5.asc -> build/lib/tests/test_data/morphology 2023-10-25T16:36:10,458 creating build/lib/bluepyemodel/export_emodel/templates 2023-10-25T16:36:10,458 copying bluepyemodel/export_emodel/templates/cell_template.jinja2 -> build/lib/bluepyemodel/export_emodel/templates 2023-10-25T16:36:10,459 copying bluepyemodel/export_emodel/templates/cell_template_neurodamus.jinja2 -> build/lib/bluepyemodel/export_emodel/templates 2023-10-25T16:36:10,459 copying bluepyemodel/export_emodel/templates/cell_template_neurodamus_sbo.jinja2 -> build/lib/bluepyemodel/export_emodel/templates 2023-10-25T16:36:10,460 creating build/lib/bluepyemodel/ecode/data 2023-10-25T16:36:10,460 copying bluepyemodel/ecode/data/NoiseOU3.txt -> build/lib/bluepyemodel/ecode/data 2023-10-25T16:36:11,036 copying bluepyemodel/ecode/data/SubWhiteNoise.txt -> build/lib/bluepyemodel/ecode/data 2023-10-25T16:36:11,091 copying bluepyemodel/ecode/data/WhiteNoise.txt -> build/lib/bluepyemodel/ecode/data 2023-10-25T16:36:11,702 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-10-25T16:36:11,703 !! 2023-10-25T16:36:11,704 ******************************************************************************** 2023-10-25T16:36:11,705 Please avoid running ``setup.py`` directly. 2023-10-25T16:36:11,705 Instead, use pypa/build, pypa/installer or other 2023-10-25T16:36:11,705 standards-based tools. 2023-10-25T16:36:11,706 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-10-25T16:36:11,707 ******************************************************************************** 2023-10-25T16:36:11,708 !! 2023-10-25T16:36:11,708 self.initialize_options() 2023-10-25T16:36:11,731 installing to build/bdist.linux-armv7l/wheel 2023-10-25T16:36:11,732 running install 2023-10-25T16:36:11,756 running install_lib 2023-10-25T16:36:11,783 creating build/bdist.linux-armv7l 2023-10-25T16:36:11,784 creating build/bdist.linux-armv7l/wheel 2023-10-25T16:36:11,785 creating build/bdist.linux-armv7l/wheel/bluepyemodel 2023-10-25T16:36:11,786 copying build/lib/bluepyemodel/__init__.py -> build/bdist.linux-armv7l/wheel/bluepyemodel 2023-10-25T16:36:11,788 creating build/bdist.linux-armv7l/wheel/bluepyemodel/export_emodel 2023-10-25T16:36:11,789 copying build/lib/bluepyemodel/export_emodel/__init__.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/export_emodel 2023-10-25T16:36:11,792 creating build/bdist.linux-armv7l/wheel/bluepyemodel/export_emodel/templates 2023-10-25T16:36:11,793 copying build/lib/bluepyemodel/export_emodel/templates/cell_template_neurodamus_sbo.jinja2 -> build/bdist.linux-armv7l/wheel/bluepyemodel/export_emodel/templates 2023-10-25T16:36:11,795 copying build/lib/bluepyemodel/export_emodel/templates/cell_template.jinja2 -> build/bdist.linux-armv7l/wheel/bluepyemodel/export_emodel/templates 2023-10-25T16:36:11,797 copying build/lib/bluepyemodel/export_emodel/templates/cell_template_neurodamus.jinja2 -> build/bdist.linux-armv7l/wheel/bluepyemodel/export_emodel/templates 2023-10-25T16:36:11,799 copying build/lib/bluepyemodel/export_emodel/utils.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/export_emodel 2023-10-25T16:36:11,801 copying build/lib/bluepyemodel/export_emodel/export_emodel.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/export_emodel 2023-10-25T16:36:11,804 creating build/bdist.linux-armv7l/wheel/bluepyemodel/optimisation 2023-10-25T16:36:11,805 copying build/lib/bluepyemodel/optimisation/__init__.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/optimisation 2023-10-25T16:36:11,811 copying build/lib/bluepyemodel/optimisation/optimisation.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/optimisation 2023-10-25T16:36:11,814 creating build/bdist.linux-armv7l/wheel/bluepyemodel/emodel_pipeline 2023-10-25T16:36:11,815 copying build/lib/bluepyemodel/emodel_pipeline/__init__.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/emodel_pipeline 2023-10-25T16:36:11,817 copying build/lib/bluepyemodel/emodel_pipeline/plotting.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/emodel_pipeline 2023-10-25T16:36:11,820 copying build/lib/bluepyemodel/emodel_pipeline/emodel_settings.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/emodel_pipeline 2023-10-25T16:36:11,830 copying build/lib/bluepyemodel/emodel_pipeline/emodel_pipeline.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/emodel_pipeline 2023-10-25T16:36:11,836 copying build/lib/bluepyemodel/emodel_pipeline/emodel_workflow.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/emodel_pipeline 2023-10-25T16:36:11,841 copying build/lib/bluepyemodel/emodel_pipeline/emodel.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/emodel_pipeline 2023-10-25T16:36:11,845 copying build/lib/bluepyemodel/emodel_pipeline/emodel_script.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/emodel_pipeline 2023-10-25T16:36:11,846 copying build/lib/bluepyemodel/emodel_pipeline/emodel_metadata.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/emodel_pipeline 2023-10-25T16:36:11,849 creating build/bdist.linux-armv7l/wheel/bluepyemodel/tools 2023-10-25T16:36:11,850 copying build/lib/bluepyemodel/tools/morphology.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/tools 2023-10-25T16:36:11,852 copying build/lib/bluepyemodel/tools/__init__.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/tools 2023-10-25T16:36:11,854 copying build/lib/bluepyemodel/tools/utils.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/tools 2023-10-25T16:36:11,856 copying build/lib/bluepyemodel/tools/mechanisms.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/tools 2023-10-25T16:36:11,858 copying build/lib/bluepyemodel/tools/multiprocessing.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/tools 2023-10-25T16:36:11,860 copying build/lib/bluepyemodel/tools/search_pdfs.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/tools 2023-10-25T16:36:11,862 creating build/bdist.linux-armv7l/wheel/bluepyemodel/evaluation 2023-10-25T16:36:11,863 copying build/lib/bluepyemodel/evaluation/modifiers.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/evaluation 2023-10-25T16:36:11,866 copying build/lib/bluepyemodel/evaluation/__init__.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/evaluation 2023-10-25T16:36:11,867 copying build/lib/bluepyemodel/evaluation/evaluator.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/evaluation 2023-10-25T16:36:11,870 copying build/lib/bluepyemodel/evaluation/recordings.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/evaluation 2023-10-25T16:36:11,872 copying build/lib/bluepyemodel/evaluation/protocol_configuration.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/evaluation 2023-10-25T16:36:11,874 copying build/lib/bluepyemodel/evaluation/efel_feature_bpem.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/evaluation 2023-10-25T16:36:11,876 copying build/lib/bluepyemodel/evaluation/fitness_calculator_configuration.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/evaluation 2023-10-25T16:36:11,879 copying build/lib/bluepyemodel/evaluation/evaluation.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/evaluation 2023-10-25T16:36:11,881 copying build/lib/bluepyemodel/evaluation/protocols.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/evaluation 2023-10-25T16:36:11,884 copying build/lib/bluepyemodel/evaluation/efeature_configuration.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/evaluation 2023-10-25T16:36:11,887 creating build/bdist.linux-armv7l/wheel/bluepyemodel/model 2023-10-25T16:36:11,888 copying build/lib/bluepyemodel/model/__init__.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/model 2023-10-25T16:36:11,890 copying build/lib/bluepyemodel/model/neuron_model_configuration.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/model 2023-10-25T16:36:11,893 copying build/lib/bluepyemodel/model/utils.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/model 2023-10-25T16:36:11,895 copying build/lib/bluepyemodel/model/distribution_configuration.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/model 2023-10-25T16:36:11,897 copying build/lib/bluepyemodel/model/parameter_configuration.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/model 2023-10-25T16:36:11,899 copying build/lib/bluepyemodel/model/model.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/model 2023-10-25T16:36:11,901 copying build/lib/bluepyemodel/model/model_configurator.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/model 2023-10-25T16:36:11,903 copying build/lib/bluepyemodel/model/morphology_configuration.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/model 2023-10-25T16:36:11,905 copying build/lib/bluepyemodel/model/model_configuration.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/model 2023-10-25T16:36:11,907 copying build/lib/bluepyemodel/model/mechanism_configuration.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/model 2023-10-25T16:36:11,909 creating build/bdist.linux-armv7l/wheel/bluepyemodel/validation 2023-10-25T16:36:11,910 copying build/lib/bluepyemodel/validation/__init__.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/validation 2023-10-25T16:36:11,912 copying build/lib/bluepyemodel/validation/validation.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/validation 2023-10-25T16:36:11,914 copying build/lib/bluepyemodel/validation/validation_functions.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/validation 2023-10-25T16:36:11,916 creating build/bdist.linux-armv7l/wheel/bluepyemodel/access_point 2023-10-25T16:36:11,917 copying build/lib/bluepyemodel/access_point/__init__.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/access_point 2023-10-25T16:36:11,919 copying build/lib/bluepyemodel/access_point/access_point.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/access_point 2023-10-25T16:36:11,922 copying build/lib/bluepyemodel/access_point/local.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/access_point 2023-10-25T16:36:11,926 creating build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-25T16:36:11,927 creating build/bdist.linux-armv7l/wheel/bluepyemodel/ecode/data 2023-10-25T16:36:11,928 copying build/lib/bluepyemodel/ecode/data/NoiseOU3.txt -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode/data 2023-10-25T16:36:12,567 copying build/lib/bluepyemodel/ecode/data/WhiteNoise.txt -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode/data 2023-10-25T16:36:13,097 copying build/lib/bluepyemodel/ecode/data/SubWhiteNoise.txt -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode/data 2023-10-25T16:36:13,142 copying build/lib/bluepyemodel/ecode/__init__.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-25T16:36:13,144 copying build/lib/bluepyemodel/ecode/firepattern.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-25T16:36:13,146 copying build/lib/bluepyemodel/ecode/poscheops.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-25T16:36:13,149 copying build/lib/bluepyemodel/ecode/random_square_inputs.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-25T16:36:13,152 copying build/lib/bluepyemodel/ecode/ramp.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-25T16:36:13,157 copying build/lib/bluepyemodel/ecode/apwaveform.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-25T16:36:13,159 copying build/lib/bluepyemodel/ecode/dendrite.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-25T16:36:13,162 copying build/lib/bluepyemodel/ecode/sinespec.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-25T16:36:13,164 copying build/lib/bluepyemodel/ecode/idrest.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-25T16:36:13,166 copying build/lib/bluepyemodel/ecode/comb.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-25T16:36:13,168 copying build/lib/bluepyemodel/ecode/probampanmda_ems.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-25T16:36:13,170 copying build/lib/bluepyemodel/ecode/stimulus.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-25T16:36:13,173 copying build/lib/bluepyemodel/ecode/hyperdepol.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-25T16:36:13,175 copying build/lib/bluepyemodel/ecode/sahp.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-25T16:36:13,178 copying build/lib/bluepyemodel/ecode/iv.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-25T16:36:13,180 copying build/lib/bluepyemodel/ecode/whitenoise.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-25T16:36:13,182 copying build/lib/bluepyemodel/ecode/subwhitenoise.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-25T16:36:13,184 copying build/lib/bluepyemodel/ecode/noise.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-25T16:36:13,186 copying build/lib/bluepyemodel/ecode/spikerec.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-25T16:36:13,188 copying build/lib/bluepyemodel/ecode/customfromfile.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-25T16:36:13,190 copying build/lib/bluepyemodel/ecode/noiseou3.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-25T16:36:13,193 copying build/lib/bluepyemodel/ecode/dehyperpol.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-25T16:36:13,195 copying build/lib/bluepyemodel/ecode/negcheops.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/ecode 2023-10-25T16:36:13,198 creating build/bdist.linux-armv7l/wheel/bluepyemodel/tasks 2023-10-25T16:36:13,199 copying build/lib/bluepyemodel/tasks/__init__.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/tasks 2023-10-25T16:36:13,201 creating build/bdist.linux-armv7l/wheel/bluepyemodel/tasks/emodel_creation 2023-10-25T16:36:13,202 copying build/lib/bluepyemodel/tasks/emodel_creation/__init__.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/tasks/emodel_creation 2023-10-25T16:36:13,204 copying build/lib/bluepyemodel/tasks/emodel_creation/optimisation.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/tasks/emodel_creation 2023-10-25T16:36:13,208 copying build/lib/bluepyemodel/tasks/luigi_tools.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/tasks 2023-10-25T16:36:13,210 copying build/lib/bluepyemodel/tasks/config.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/tasks 2023-10-25T16:36:13,213 copying build/lib/bluepyemodel/tasks/luigi_custom.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/tasks 2023-10-25T16:36:13,215 creating build/bdist.linux-armv7l/wheel/bluepyemodel/efeatures_extraction 2023-10-25T16:36:13,216 copying build/lib/bluepyemodel/efeatures_extraction/__init__.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/efeatures_extraction 2023-10-25T16:36:13,219 copying build/lib/bluepyemodel/efeatures_extraction/efeatures_extraction.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/efeatures_extraction 2023-10-25T16:36:13,222 copying build/lib/bluepyemodel/efeatures_extraction/auto_targets.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/efeatures_extraction 2023-10-25T16:36:13,224 copying build/lib/bluepyemodel/efeatures_extraction/trace_file.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/efeatures_extraction 2023-10-25T16:36:13,227 copying build/lib/bluepyemodel/efeatures_extraction/targets_configuration.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/efeatures_extraction 2023-10-25T16:36:13,230 copying build/lib/bluepyemodel/efeatures_extraction/targets_configurator.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/efeatures_extraction 2023-10-25T16:36:13,232 copying build/lib/bluepyemodel/efeatures_extraction/target.py -> build/bdist.linux-armv7l/wheel/bluepyemodel/efeatures_extraction 2023-10-25T16:36:13,235 creating build/bdist.linux-armv7l/wheel/tests 2023-10-25T16:36:13,236 copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests 2023-10-25T16:36:13,239 creating build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-25T16:36:13,240 copying build/lib/tests/test_data/test_bAP.dend2.v.csv -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-25T16:36:13,243 copying build/lib/tests/test_data/test_bAP.ca_prox_apic.cai.csv -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-25T16:36:13,246 creating build/bdist.linux-armv7l/wheel/tests/test_data/morphology 2023-10-25T16:36:13,247 copying build/lib/tests/test_data/morphology/C060114A5.asc -> build/bdist.linux-armv7l/wheel/tests/test_data/morphology 2023-10-25T16:36:13,260 copying build/lib/tests/test_data/test_IV_-100.soma.v.csv -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-25T16:36:13,263 copying build/lib/tests/test_data/test_APWaveform_320.soma.v.csv -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-25T16:36:13,266 copying build/lib/tests/test_data/test_mechanisms.json -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-25T16:36:13,268 copying build/lib/tests/test_data/final_tmp.json -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-25T16:36:13,271 copying build/lib/tests/test_data/test_RMPProtocol.soma.v.csv -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-25T16:36:13,273 copying build/lib/tests/test_data/test_SpikeRec_600.soma.v.csv -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-25T16:36:13,276 copying build/lib/tests/test_data/test_bAP.ca_ais.cai.csv -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-25T16:36:13,278 copying build/lib/tests/test_data/test_bAP.soma.v.csv -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-25T16:36:13,281 copying build/lib/tests/test_data/test_bAP.ca_prox_basal.cai.csv -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-25T16:36:13,284 copying build/lib/tests/test_data/test_parameters.json -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-25T16:36:13,286 copying build/lib/tests/test_data/test_protocols.json -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-25T16:36:13,288 copying build/lib/tests/test_data/test_bAP.ca_soma.cai.csv -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-25T16:36:13,291 creating build/bdist.linux-armv7l/wheel/tests/test_data/mechanisms 2023-10-25T16:36:13,292 copying build/lib/tests/test_data/mechanisms/Nap_Et2.mod -> build/bdist.linux-armv7l/wheel/tests/test_data/mechanisms 2023-10-25T16:36:13,294 copying build/lib/tests/test_data/mechanisms/Ca_LVAst.mod -> build/bdist.linux-armv7l/wheel/tests/test_data/mechanisms 2023-10-25T16:36:13,295 copying build/lib/tests/test_data/mechanisms/K_Tst.mod -> build/bdist.linux-armv7l/wheel/tests/test_data/mechanisms 2023-10-25T16:36:13,298 copying build/lib/tests/test_data/mechanisms/K_Pst.mod -> build/bdist.linux-armv7l/wheel/tests/test_data/mechanisms 2023-10-25T16:36:13,300 copying build/lib/tests/test_data/mechanisms/NaTg.mod -> build/bdist.linux-armv7l/wheel/tests/test_data/mechanisms 2023-10-25T16:36:13,302 copying build/lib/tests/test_data/mechanisms/CaDynamics_DC0.mod -> build/bdist.linux-armv7l/wheel/tests/test_data/mechanisms 2023-10-25T16:36:13,304 copying build/lib/tests/test_data/mechanisms/SKv3_1.mod -> build/bdist.linux-armv7l/wheel/tests/test_data/mechanisms 2023-10-25T16:36:13,307 copying build/lib/tests/test_data/mechanisms/Ca_HVA2.mod -> build/bdist.linux-armv7l/wheel/tests/test_data/mechanisms 2023-10-25T16:36:13,309 copying build/lib/tests/test_data/mechanisms/Ih.mod -> build/bdist.linux-armv7l/wheel/tests/test_data/mechanisms 2023-10-25T16:36:13,311 copying build/lib/tests/test_data/mechanisms/SK_E2.mod -> build/bdist.linux-armv7l/wheel/tests/test_data/mechanisms 2023-10-25T16:36:13,313 copying build/lib/tests/test_data/final.json -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-25T16:36:13,316 copying build/lib/tests/test_data/test_Step_280.soma.v.csv -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-25T16:36:13,322 creating build/bdist.linux-armv7l/wheel/tests/test_data/ephys_data 2023-10-25T16:36:13,323 copying build/lib/tests/test_data/ephys_data/C010600C1-MT-C1.nwb -> build/bdist.linux-armv7l/wheel/tests/test_data/ephys_data 2023-10-25T16:36:13,430 copying build/lib/tests/test_data/test_bAP.dend1.v.csv -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-25T16:36:13,434 copying build/lib/tests/test_data/test_recipes.json -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-25T16:36:13,437 creating build/bdist.linux-armv7l/wheel/tests/test_data/config 2023-10-25T16:36:13,438 copying build/lib/tests/test_data/config/config_dict.json -> build/bdist.linux-armv7l/wheel/tests/test_data/config 2023-10-25T16:36:13,440 copying build/lib/tests/test_data/config/recipes.json -> build/bdist.linux-armv7l/wheel/tests/test_data/config 2023-10-25T16:36:13,443 copying build/lib/tests/test_data/config/recipes_restart.json -> build/bdist.linux-armv7l/wheel/tests/test_data/config 2023-10-25T16:36:13,446 copying build/lib/tests/test_data/config/params_restart.json -> build/bdist.linux-armv7l/wheel/tests/test_data/config 2023-10-25T16:36:13,484 copying build/lib/tests/test_data/config/protocols.json -> build/bdist.linux-armv7l/wheel/tests/test_data/config 2023-10-25T16:36:13,487 copying build/lib/tests/test_data/config/params.json -> build/bdist.linux-armv7l/wheel/tests/test_data/config 2023-10-25T16:36:13,489 copying build/lib/tests/test_data/config/features.json -> build/bdist.linux-armv7l/wheel/tests/test_data/config 2023-10-25T16:36:13,491 copying build/lib/tests/test_data/test_Step_200.soma.v.csv -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-25T16:36:13,497 copying build/lib/tests/test_data/test_features.json -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-25T16:36:13,499 copying build/lib/tests/test_data/test_RinProtocol.soma.v.csv -> build/bdist.linux-armv7l/wheel/tests/test_data 2023-10-25T16:36:13,502 creating build/bdist.linux-armv7l/wheel/tests/test_models 2023-10-25T16:36:13,503 copying build/lib/tests/test_models/__init__.py -> build/bdist.linux-armv7l/wheel/tests/test_models 2023-10-25T16:36:13,505 copying build/lib/tests/test_models/dummycells.py -> build/bdist.linux-armv7l/wheel/tests/test_models 2023-10-25T16:36:13,507 creating build/bdist.linux-armv7l/wheel/tests/functional_tests 2023-10-25T16:36:13,508 copying build/lib/tests/functional_tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests/functional_tests 2023-10-25T16:36:13,510 copying build/lib/tests/functional_tests/test_protocols.py -> build/bdist.linux-armv7l/wheel/tests/functional_tests 2023-10-25T16:36:13,512 copying build/lib/tests/functional_tests/test_validation.py -> build/bdist.linux-armv7l/wheel/tests/functional_tests 2023-10-25T16:36:13,514 creating build/bdist.linux-armv7l/wheel/tests/unit_tests 2023-10-25T16:36:13,515 copying build/lib/tests/unit_tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests/unit_tests 2023-10-25T16:36:13,518 copying build/lib/tests/unit_tests/test_validation_functions.py -> build/bdist.linux-armv7l/wheel/tests/unit_tests 2023-10-25T16:36:13,520 copying build/lib/tests/unit_tests/test_model_parameters_configuration.py -> build/bdist.linux-armv7l/wheel/tests/unit_tests 2023-10-25T16:36:13,522 copying build/lib/tests/unit_tests/test_emodel_pipeline.py -> build/bdist.linux-armv7l/wheel/tests/unit_tests 2023-10-25T16:36:13,524 copying build/lib/tests/unit_tests/test_ecodes.py -> build/bdist.linux-armv7l/wheel/tests/unit_tests 2023-10-25T16:36:13,527 copying build/lib/tests/unit_tests/test_local_access_point.py -> build/bdist.linux-armv7l/wheel/tests/unit_tests 2023-10-25T16:36:13,529 copying build/lib/tests/unit_tests/test_tools.py -> build/bdist.linux-armv7l/wheel/tests/unit_tests 2023-10-25T16:36:13,531 copying build/lib/tests/unit_tests/test_optimisation.py -> build/bdist.linux-armv7l/wheel/tests/unit_tests 2023-10-25T16:36:13,533 copying build/lib/tests/unit_tests/test_plotting.py -> build/bdist.linux-armv7l/wheel/tests/unit_tests 2023-10-25T16:36:13,535 copying build/lib/tests/unit_tests/test_evaluator.py -> build/bdist.linux-armv7l/wheel/tests/unit_tests 2023-10-25T16:36:13,537 copying build/lib/tests/unit_tests/test_emodelmetadata.py -> build/bdist.linux-armv7l/wheel/tests/unit_tests 2023-10-25T16:36:13,540 copying build/lib/tests/unit_tests/test_model.py -> build/bdist.linux-armv7l/wheel/tests/unit_tests 2023-10-25T16:36:13,542 copying build/lib/tests/unit_tests/test_fitness_calculator_configuration.py -> build/bdist.linux-armv7l/wheel/tests/unit_tests 2023-10-25T16:36:13,544 copying build/lib/tests/unit_tests/test_targets_configuration.py -> build/bdist.linux-armv7l/wheel/tests/unit_tests 2023-10-25T16:36:13,546 running install_egg_info 2023-10-25T16:36:13,576 Copying bluepyemodel.egg-info to build/bdist.linux-armv7l/wheel/bluepyemodel-0.0.55-py3.11.egg-info 2023-10-25T16:36:13,587 running install_scripts 2023-10-25T16:36:13,614 creating build/bdist.linux-armv7l/wheel/bluepyemodel-0.0.55.dist-info/WHEEL 2023-10-25T16:36:13,617 creating '/tmp/pip-wheel-d6f4pdyv/bluepyemodel-0.0.55-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-10-25T16:36:13,620 adding 'bluepyemodel/__init__.py' 2023-10-25T16:36:13,622 adding 'bluepyemodel/access_point/__init__.py' 2023-10-25T16:36:13,624 adding 'bluepyemodel/access_point/access_point.py' 2023-10-25T16:36:13,628 adding 'bluepyemodel/access_point/local.py' 2023-10-25T16:36:13,630 adding 'bluepyemodel/ecode/__init__.py' 2023-10-25T16:36:13,632 adding 'bluepyemodel/ecode/apwaveform.py' 2023-10-25T16:36:13,633 adding 'bluepyemodel/ecode/comb.py' 2023-10-25T16:36:13,635 adding 'bluepyemodel/ecode/customfromfile.py' 2023-10-25T16:36:13,637 adding 'bluepyemodel/ecode/dehyperpol.py' 2023-10-25T16:36:13,638 adding 'bluepyemodel/ecode/dendrite.py' 2023-10-25T16:36:13,640 adding 'bluepyemodel/ecode/firepattern.py' 2023-10-25T16:36:13,641 adding 'bluepyemodel/ecode/hyperdepol.py' 2023-10-25T16:36:13,642 adding 'bluepyemodel/ecode/idrest.py' 2023-10-25T16:36:13,644 adding 'bluepyemodel/ecode/iv.py' 2023-10-25T16:36:13,646 adding 'bluepyemodel/ecode/negcheops.py' 2023-10-25T16:36:13,647 adding 'bluepyemodel/ecode/noise.py' 2023-10-25T16:36:13,648 adding 'bluepyemodel/ecode/noiseou3.py' 2023-10-25T16:36:13,650 adding 'bluepyemodel/ecode/poscheops.py' 2023-10-25T16:36:13,651 adding 'bluepyemodel/ecode/probampanmda_ems.py' 2023-10-25T16:36:13,653 adding 'bluepyemodel/ecode/ramp.py' 2023-10-25T16:36:13,655 adding 'bluepyemodel/ecode/random_square_inputs.py' 2023-10-25T16:36:13,656 adding 'bluepyemodel/ecode/sahp.py' 2023-10-25T16:36:13,658 adding 'bluepyemodel/ecode/sinespec.py' 2023-10-25T16:36:13,659 adding 'bluepyemodel/ecode/spikerec.py' 2023-10-25T16:36:13,661 adding 'bluepyemodel/ecode/stimulus.py' 2023-10-25T16:36:13,662 adding 'bluepyemodel/ecode/subwhitenoise.py' 2023-10-25T16:36:13,664 adding 'bluepyemodel/ecode/whitenoise.py' 2023-10-25T16:36:16,099 adding 'bluepyemodel/ecode/data/NoiseOU3.txt' 2023-10-25T16:36:16,547 adding 'bluepyemodel/ecode/data/SubWhiteNoise.txt' 2023-10-25T16:36:18,956 adding 'bluepyemodel/ecode/data/WhiteNoise.txt' 2023-10-25T16:36:19,200 adding 'bluepyemodel/efeatures_extraction/__init__.py' 2023-10-25T16:36:19,201 adding 'bluepyemodel/efeatures_extraction/auto_targets.py' 2023-10-25T16:36:19,203 adding 'bluepyemodel/efeatures_extraction/efeatures_extraction.py' 2023-10-25T16:36:19,204 adding 'bluepyemodel/efeatures_extraction/target.py' 2023-10-25T16:36:19,206 adding 'bluepyemodel/efeatures_extraction/targets_configuration.py' 2023-10-25T16:36:19,207 adding 'bluepyemodel/efeatures_extraction/targets_configurator.py' 2023-10-25T16:36:19,209 adding 'bluepyemodel/efeatures_extraction/trace_file.py' 2023-10-25T16:36:19,211 adding 'bluepyemodel/emodel_pipeline/__init__.py' 2023-10-25T16:36:19,212 adding 'bluepyemodel/emodel_pipeline/emodel.py' 2023-10-25T16:36:19,214 adding 'bluepyemodel/emodel_pipeline/emodel_metadata.py' 2023-10-25T16:36:19,216 adding 'bluepyemodel/emodel_pipeline/emodel_pipeline.py' 2023-10-25T16:36:19,217 adding 'bluepyemodel/emodel_pipeline/emodel_script.py' 2023-10-25T16:36:19,220 adding 'bluepyemodel/emodel_pipeline/emodel_settings.py' 2023-10-25T16:36:19,221 adding 'bluepyemodel/emodel_pipeline/emodel_workflow.py' 2023-10-25T16:36:19,225 adding 'bluepyemodel/emodel_pipeline/plotting.py' 2023-10-25T16:36:19,228 adding 'bluepyemodel/evaluation/__init__.py' 2023-10-25T16:36:19,229 adding 'bluepyemodel/evaluation/efeature_configuration.py' 2023-10-25T16:36:19,231 adding 'bluepyemodel/evaluation/efel_feature_bpem.py' 2023-10-25T16:36:19,233 adding 'bluepyemodel/evaluation/evaluation.py' 2023-10-25T16:36:19,236 adding 'bluepyemodel/evaluation/evaluator.py' 2023-10-25T16:36:19,239 adding 'bluepyemodel/evaluation/fitness_calculator_configuration.py' 2023-10-25T16:36:19,241 adding 'bluepyemodel/evaluation/modifiers.py' 2023-10-25T16:36:19,243 adding 'bluepyemodel/evaluation/protocol_configuration.py' 2023-10-25T16:36:19,246 adding 'bluepyemodel/evaluation/protocols.py' 2023-10-25T16:36:19,248 adding 'bluepyemodel/evaluation/recordings.py' 2023-10-25T16:36:19,249 adding 'bluepyemodel/export_emodel/__init__.py' 2023-10-25T16:36:19,251 adding 'bluepyemodel/export_emodel/export_emodel.py' 2023-10-25T16:36:19,253 adding 'bluepyemodel/export_emodel/utils.py' 2023-10-25T16:36:19,255 adding 'bluepyemodel/export_emodel/templates/cell_template.jinja2' 2023-10-25T16:36:19,256 adding 'bluepyemodel/export_emodel/templates/cell_template_neurodamus.jinja2' 2023-10-25T16:36:19,258 adding 'bluepyemodel/export_emodel/templates/cell_template_neurodamus_sbo.jinja2' 2023-10-25T16:36:19,260 adding 'bluepyemodel/model/__init__.py' 2023-10-25T16:36:19,261 adding 'bluepyemodel/model/distribution_configuration.py' 2023-10-25T16:36:19,263 adding 'bluepyemodel/model/mechanism_configuration.py' 2023-10-25T16:36:19,264 adding 'bluepyemodel/model/model.py' 2023-10-25T16:36:19,266 adding 'bluepyemodel/model/model_configuration.py' 2023-10-25T16:36:19,267 adding 'bluepyemodel/model/model_configurator.py' 2023-10-25T16:36:19,268 adding 'bluepyemodel/model/morphology_configuration.py' 2023-10-25T16:36:19,271 adding 'bluepyemodel/model/neuron_model_configuration.py' 2023-10-25T16:36:19,273 adding 'bluepyemodel/model/parameter_configuration.py' 2023-10-25T16:36:19,274 adding 'bluepyemodel/model/utils.py' 2023-10-25T16:36:19,276 adding 'bluepyemodel/optimisation/__init__.py' 2023-10-25T16:36:19,277 adding 'bluepyemodel/optimisation/optimisation.py' 2023-10-25T16:36:19,279 adding 'bluepyemodel/tasks/__init__.py' 2023-10-25T16:36:19,280 adding 'bluepyemodel/tasks/config.py' 2023-10-25T16:36:19,282 adding 'bluepyemodel/tasks/luigi_custom.py' 2023-10-25T16:36:19,283 adding 'bluepyemodel/tasks/luigi_tools.py' 2023-10-25T16:36:19,285 adding 'bluepyemodel/tasks/emodel_creation/__init__.py' 2023-10-25T16:36:19,289 adding 'bluepyemodel/tasks/emodel_creation/optimisation.py' 2023-10-25T16:36:19,291 adding 'bluepyemodel/tools/__init__.py' 2023-10-25T16:36:19,292 adding 'bluepyemodel/tools/mechanisms.py' 2023-10-25T16:36:19,293 adding 'bluepyemodel/tools/morphology.py' 2023-10-25T16:36:19,295 adding 'bluepyemodel/tools/multiprocessing.py' 2023-10-25T16:36:19,296 adding 'bluepyemodel/tools/search_pdfs.py' 2023-10-25T16:36:19,298 adding 'bluepyemodel/tools/utils.py' 2023-10-25T16:36:19,300 adding 'bluepyemodel/validation/__init__.py' 2023-10-25T16:36:19,301 adding 'bluepyemodel/validation/validation.py' 2023-10-25T16:36:19,302 adding 'bluepyemodel/validation/validation_functions.py' 2023-10-25T16:36:19,305 adding 'tests/__init__.py' 2023-10-25T16:36:19,307 adding 'tests/functional_tests/__init__.py' 2023-10-25T16:36:19,308 adding 'tests/functional_tests/test_protocols.py' 2023-10-25T16:36:19,309 adding 'tests/functional_tests/test_validation.py' 2023-10-25T16:36:19,313 adding 'tests/test_data/final.json' 2023-10-25T16:36:19,315 adding 'tests/test_data/final_tmp.json' 2023-10-25T16:36:19,320 adding 'tests/test_data/test_APWaveform_320.soma.v.csv' 2023-10-25T16:36:19,323 adding 'tests/test_data/test_IV_-100.soma.v.csv' 2023-10-25T16:36:19,325 adding 'tests/test_data/test_RMPProtocol.soma.v.csv' 2023-10-25T16:36:19,326 adding 'tests/test_data/test_RinProtocol.soma.v.csv' 2023-10-25T16:36:19,329 adding 'tests/test_data/test_SpikeRec_600.soma.v.csv' 2023-10-25T16:36:19,394 adding 'tests/test_data/test_Step_200.soma.v.csv' 2023-10-25T16:36:19,468 adding 'tests/test_data/test_Step_280.soma.v.csv' 2023-10-25T16:36:19,474 adding 'tests/test_data/test_bAP.ca_ais.cai.csv' 2023-10-25T16:36:19,477 adding 'tests/test_data/test_bAP.ca_prox_apic.cai.csv' 2023-10-25T16:36:19,481 adding 'tests/test_data/test_bAP.ca_prox_basal.cai.csv' 2023-10-25T16:36:19,485 adding 'tests/test_data/test_bAP.ca_soma.cai.csv' 2023-10-25T16:36:19,488 adding 'tests/test_data/test_bAP.dend1.v.csv' 2023-10-25T16:36:19,492 adding 'tests/test_data/test_bAP.dend2.v.csv' 2023-10-25T16:36:19,495 adding 'tests/test_data/test_bAP.soma.v.csv' 2023-10-25T16:36:19,497 adding 'tests/test_data/test_features.json' 2023-10-25T16:36:19,499 adding 'tests/test_data/test_mechanisms.json' 2023-10-25T16:36:19,500 adding 'tests/test_data/test_parameters.json' 2023-10-25T16:36:19,501 adding 'tests/test_data/test_protocols.json' 2023-10-25T16:36:19,503 adding 'tests/test_data/test_recipes.json' 2023-10-25T16:36:19,505 adding 'tests/test_data/config/config_dict.json' 2023-10-25T16:36:19,507 adding 'tests/test_data/config/features.json' 2023-10-25T16:36:19,508 adding 'tests/test_data/config/params.json' 2023-10-25T16:36:19,510 adding 'tests/test_data/config/params_restart.json' 2023-10-25T16:36:19,511 adding 'tests/test_data/config/protocols.json' 2023-10-25T16:36:19,512 adding 'tests/test_data/config/recipes.json' 2023-10-25T16:36:19,514 adding 'tests/test_data/config/recipes_restart.json' 2023-10-25T16:36:19,902 adding 'tests/test_data/ephys_data/C010600C1-MT-C1.nwb' 2023-10-25T16:36:19,946 adding 'tests/test_data/mechanisms/CaDynamics_DC0.mod' 2023-10-25T16:36:19,947 adding 'tests/test_data/mechanisms/Ca_HVA2.mod' 2023-10-25T16:36:19,949 adding 'tests/test_data/mechanisms/Ca_LVAst.mod' 2023-10-25T16:36:19,950 adding 'tests/test_data/mechanisms/Ih.mod' 2023-10-25T16:36:19,951 adding 'tests/test_data/mechanisms/K_Pst.mod' 2023-10-25T16:36:19,952 adding 'tests/test_data/mechanisms/K_Tst.mod' 2023-10-25T16:36:19,954 adding 'tests/test_data/mechanisms/NaTg.mod' 2023-10-25T16:36:19,955 adding 'tests/test_data/mechanisms/Nap_Et2.mod' 2023-10-25T16:36:19,956 adding 'tests/test_data/mechanisms/SK_E2.mod' 2023-10-25T16:36:19,957 adding 'tests/test_data/mechanisms/SKv3_1.mod' 2023-10-25T16:36:20,032 adding 'tests/test_data/morphology/C060114A5.asc' 2023-10-25T16:36:20,039 adding 'tests/test_models/__init__.py' 2023-10-25T16:36:20,040 adding 'tests/test_models/dummycells.py' 2023-10-25T16:36:20,042 adding 'tests/unit_tests/__init__.py' 2023-10-25T16:36:20,044 adding 'tests/unit_tests/test_ecodes.py' 2023-10-25T16:36:20,046 adding 'tests/unit_tests/test_emodel_pipeline.py' 2023-10-25T16:36:20,047 adding 'tests/unit_tests/test_emodelmetadata.py' 2023-10-25T16:36:20,049 adding 'tests/unit_tests/test_evaluator.py' 2023-10-25T16:36:20,051 adding 'tests/unit_tests/test_fitness_calculator_configuration.py' 2023-10-25T16:36:20,052 adding 'tests/unit_tests/test_local_access_point.py' 2023-10-25T16:36:20,054 adding 'tests/unit_tests/test_model.py' 2023-10-25T16:36:20,055 adding 'tests/unit_tests/test_model_parameters_configuration.py' 2023-10-25T16:36:20,056 adding 'tests/unit_tests/test_optimisation.py' 2023-10-25T16:36:20,058 adding 'tests/unit_tests/test_plotting.py' 2023-10-25T16:36:20,059 adding 'tests/unit_tests/test_targets_configuration.py' 2023-10-25T16:36:20,061 adding 'tests/unit_tests/test_tools.py' 2023-10-25T16:36:20,062 adding 'tests/unit_tests/test_validation_functions.py' 2023-10-25T16:36:20,063 adding 'bluepyemodel-0.0.55.dist-info/AUTHORS.txt' 2023-10-25T16:36:20,065 adding 'bluepyemodel-0.0.55.dist-info/COPYING' 2023-10-25T16:36:20,066 adding 'bluepyemodel-0.0.55.dist-info/LICENSE.txt' 2023-10-25T16:36:20,068 adding 'bluepyemodel-0.0.55.dist-info/METADATA' 2023-10-25T16:36:20,069 adding 'bluepyemodel-0.0.55.dist-info/WHEEL' 2023-10-25T16:36:20,070 adding 'bluepyemodel-0.0.55.dist-info/top_level.txt' 2023-10-25T16:36:20,073 adding 'bluepyemodel-0.0.55.dist-info/RECORD' 2023-10-25T16:36:20,239 removing build/bdist.linux-armv7l/wheel 2023-10-25T16:36:20,436 Building wheel for bluepyemodel (setup.py): finished with status 'done' 2023-10-25T16:36:20,583 Created wheel for bluepyemodel: filename=bluepyemodel-0.0.55-py3-none-any.whl size=12439020 sha256=cd0e7f00a5c788134a72f1b756488382d0b8a8ec5eaf1d7e67da7577a672d613 2023-10-25T16:36:20,584 Stored in directory: /tmp/pip-ephem-wheel-cache-ui1uojqz/wheels/00/48/ee/143c29bd1bb26fe5236becb53801a52b1bd1547cf9d998c545 2023-10-25T16:36:20,605 Successfully built bluepyemodel 2023-10-25T16:36:20,925 Removed build tracker: '/tmp/pip-build-tracker-bf9bmhkk'