2023-10-27T04:10:56,509 Created temporary directory: /tmp/pip-build-tracker-vq3d_5hg
2023-10-27T04:10:56,510 Initialized build tracking at /tmp/pip-build-tracker-vq3d_5hg
2023-10-27T04:10:56,511 Created build tracker: /tmp/pip-build-tracker-vq3d_5hg
2023-10-27T04:10:56,511 Entered build tracker: /tmp/pip-build-tracker-vq3d_5hg
2023-10-27T04:10:56,512 Created temporary directory: /tmp/pip-wheel-7m21w2ft
2023-10-27T04:10:56,515 Created temporary directory: /tmp/pip-ephem-wheel-cache-3u96zixz
2023-10-27T04:10:56,536 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-10-27T04:10:56,540 2 location(s) to search for versions of buscolite:
2023-10-27T04:10:56,540 * https://pypi.org/simple/buscolite/
2023-10-27T04:10:56,540 * https://www.piwheels.org/simple/buscolite/
2023-10-27T04:10:56,541 Fetching project page and analyzing links: https://pypi.org/simple/buscolite/
2023-10-27T04:10:56,541 Getting page https://pypi.org/simple/buscolite/
2023-10-27T04:10:56,543 Found index url https://pypi.org/simple/
2023-10-27T04:10:56,758 Fetched page https://pypi.org/simple/buscolite/ as application/vnd.pypi.simple.v1+json
2023-10-27T04:10:56,761   Skipping link: No binaries permitted for buscolite: https://files.pythonhosted.org/packages/35/36/070f75fc59144b90f5e6ca51c6b2bc966d3b702e0bcd56c510f785670b86/buscolite-0.4.8-py3-none-any.whl (from https://pypi.org/simple/buscolite/) (requires-python:>=3.6.0)
2023-10-27T04:10:56,762   Found link https://files.pythonhosted.org/packages/6d/94/b821ee2c252992a6737e28f3e15ea5e2162560d18035ed8c0cd7f33b8fc3/buscolite-0.4.8.tar.gz (from https://pypi.org/simple/buscolite/) (requires-python:>=3.6.0), version: 0.4.8
2023-10-27T04:10:56,762   Skipping link: No binaries permitted for buscolite: https://files.pythonhosted.org/packages/00/1f/4f850471570253c62c4d7f4f5d0f85d4fcdf9eaec50f052e24071cc136e1/buscolite-0.5.1-py3-none-any.whl (from https://pypi.org/simple/buscolite/) (requires-python:>=3.6.0)
2023-10-27T04:10:56,763   Found link https://files.pythonhosted.org/packages/8b/5f/2575c8412879dbf3fb7300cd0f4eac73afba099bb08e3886a68081a366ed/buscolite-0.5.1.tar.gz (from https://pypi.org/simple/buscolite/) (requires-python:>=3.6.0), version: 0.5.1
2023-10-27T04:10:56,764   Skipping link: No binaries permitted for buscolite: https://files.pythonhosted.org/packages/5e/ad/b0cb5ee78ff3412c7321e24cb6af2bf202f00f31a307e47665570d494c80/buscolite-23.10.26-py3-none-any.whl (from https://pypi.org/simple/buscolite/) (requires-python:>=3.6.0)
2023-10-27T04:10:56,765   Found link https://files.pythonhosted.org/packages/ef/36/f32a36a2bf99261514b8c72d003b1c6d4ed52fecf66cb3a7a27287e3fed6/buscolite-23.10.26.tar.gz (from https://pypi.org/simple/buscolite/) (requires-python:>=3.6.0), version: 23.10.26
2023-10-27T04:10:56,766 Fetching project page and analyzing links: https://www.piwheels.org/simple/buscolite/
2023-10-27T04:10:56,766 Getting page https://www.piwheels.org/simple/buscolite/
2023-10-27T04:10:56,768 Found index url https://www.piwheels.org/simple/
2023-10-27T04:10:56,925 Fetched page https://www.piwheels.org/simple/buscolite/ as text/html
2023-10-27T04:10:56,927   Skipping link: No binaries permitted for buscolite: https://www.piwheels.org/simple/buscolite/buscolite-0.5.1-py3-none-any.whl#sha256=d0a8a2472df33f8e3c6e1b0e852f126136720fdfe566fc4ab3db4a80f9ae5db5 (from https://www.piwheels.org/simple/buscolite/) (requires-python:>=3.6.0)
2023-10-27T04:10:56,927   Skipping link: No binaries permitted for buscolite: https://www.piwheels.org/simple/buscolite/buscolite-0.4.8-py3-none-any.whl#sha256=6cb3d705569a682171f0f71bffa146ea815d8489a3e2954bd741e1e3c56e12dc (from https://www.piwheels.org/simple/buscolite/) (requires-python:>=3.6.0)
2023-10-27T04:10:56,928 Skipping link: not a file: https://www.piwheels.org/simple/buscolite/
2023-10-27T04:10:56,929 Skipping link: not a file: https://pypi.org/simple/buscolite/
2023-10-27T04:10:56,947 Given no hashes to check 1 links for project 'buscolite': discarding no candidates
2023-10-27T04:10:56,965 Collecting buscolite==23.10.26
2023-10-27T04:10:56,967   Created temporary directory: /tmp/pip-unpack-ykzpyft2
2023-10-27T04:10:57,180   Downloading buscolite-23.10.26.tar.gz (135 kB)
2023-10-27T04:10:57,321   Added buscolite==23.10.26 from https://files.pythonhosted.org/packages/ef/36/f32a36a2bf99261514b8c72d003b1c6d4ed52fecf66cb3a7a27287e3fed6/buscolite-23.10.26.tar.gz to build tracker '/tmp/pip-build-tracker-vq3d_5hg'
2023-10-27T04:10:57,322   Running setup.py (path:/tmp/pip-wheel-7m21w2ft/buscolite_46c9d9751ba3492fb74bef508b41dd86/setup.py) egg_info for package buscolite
2023-10-27T04:10:57,323   Created temporary directory: /tmp/pip-pip-egg-info-s0u3sn5n
2023-10-27T04:10:57,323   Preparing metadata (setup.py): started
2023-10-27T04:10:57,325   Running command python setup.py egg_info
2023-10-27T04:10:58,312   running egg_info
2023-10-27T04:10:58,313   creating /tmp/pip-pip-egg-info-s0u3sn5n/buscolite.egg-info
2023-10-27T04:10:58,338   writing /tmp/pip-pip-egg-info-s0u3sn5n/buscolite.egg-info/PKG-INFO
2023-10-27T04:10:58,341   writing dependency_links to /tmp/pip-pip-egg-info-s0u3sn5n/buscolite.egg-info/dependency_links.txt
2023-10-27T04:10:58,343   writing entry points to /tmp/pip-pip-egg-info-s0u3sn5n/buscolite.egg-info/entry_points.txt
2023-10-27T04:10:58,344   writing requirements to /tmp/pip-pip-egg-info-s0u3sn5n/buscolite.egg-info/requires.txt
2023-10-27T04:10:58,345   writing top-level names to /tmp/pip-pip-egg-info-s0u3sn5n/buscolite.egg-info/top_level.txt
2023-10-27T04:10:58,347   writing manifest file '/tmp/pip-pip-egg-info-s0u3sn5n/buscolite.egg-info/SOURCES.txt'
2023-10-27T04:10:58,423   reading manifest file '/tmp/pip-pip-egg-info-s0u3sn5n/buscolite.egg-info/SOURCES.txt'
2023-10-27T04:10:58,424   reading manifest template 'MANIFEST.in'
2023-10-27T04:10:58,426   adding license file 'LICENSE.md'
2023-10-27T04:10:58,428   writing manifest file '/tmp/pip-pip-egg-info-s0u3sn5n/buscolite.egg-info/SOURCES.txt'
2023-10-27T04:10:58,535   Preparing metadata (setup.py): finished with status 'done'
2023-10-27T04:10:58,539   Source in /tmp/pip-wheel-7m21w2ft/buscolite_46c9d9751ba3492fb74bef508b41dd86 has version 23.10.26, which satisfies requirement buscolite==23.10.26 from https://files.pythonhosted.org/packages/ef/36/f32a36a2bf99261514b8c72d003b1c6d4ed52fecf66cb3a7a27287e3fed6/buscolite-23.10.26.tar.gz
2023-10-27T04:10:58,540   Removed buscolite==23.10.26 from https://files.pythonhosted.org/packages/ef/36/f32a36a2bf99261514b8c72d003b1c6d4ed52fecf66cb3a7a27287e3fed6/buscolite-23.10.26.tar.gz from build tracker '/tmp/pip-build-tracker-vq3d_5hg'
2023-10-27T04:10:58,546 Created temporary directory: /tmp/pip-unpack-0ttdcy2b
2023-10-27T04:10:58,547 Created temporary directory: /tmp/pip-unpack-rywpj2ne
2023-10-27T04:10:58,553 Building wheels for collected packages: buscolite
2023-10-27T04:10:58,558   Created temporary directory: /tmp/pip-wheel-fjhao7ys
2023-10-27T04:10:58,558   Building wheel for buscolite (setup.py): started
2023-10-27T04:10:58,560   Destination directory: /tmp/pip-wheel-fjhao7ys
2023-10-27T04:10:58,560   Running command python setup.py bdist_wheel
2023-10-27T04:10:59,551   running bdist_wheel
2023-10-27T04:10:59,647   running build
2023-10-27T04:10:59,647   running build_py
2023-10-27T04:10:59,674   creating build
2023-10-27T04:10:59,675   creating build/lib
2023-10-27T04:10:59,676   creating build/lib/buscolite
2023-10-27T04:10:59,677   copying buscolite/__init__.py -> build/lib/buscolite
2023-10-27T04:10:59,679   copying buscolite/__version__.py -> build/lib/buscolite
2023-10-27T04:10:59,681   copying buscolite/utilities.py -> build/lib/buscolite
2023-10-27T04:10:59,683   copying buscolite/log.py -> build/lib/buscolite
2023-10-27T04:10:59,685   copying buscolite/busco.py -> build/lib/buscolite
2023-10-27T04:10:59,687   copying buscolite/augustus.py -> build/lib/buscolite
2023-10-27T04:10:59,690   copying buscolite/search.py -> build/lib/buscolite
2023-10-27T04:10:59,692   copying buscolite/fasta.py -> build/lib/buscolite
2023-10-27T04:10:59,694   copying buscolite/fastx.py -> build/lib/buscolite
2023-10-27T04:10:59,697   copying buscolite/gff.py -> build/lib/buscolite
2023-10-27T04:10:59,699   copying buscolite/__main__.py -> build/lib/buscolite
2023-10-27T04:10:59,701   copying buscolite/help_formatter.py -> build/lib/buscolite
2023-10-27T04:10:59,703   running egg_info
2023-10-27T04:10:59,758   writing buscolite.egg-info/PKG-INFO
2023-10-27T04:10:59,761   writing dependency_links to buscolite.egg-info/dependency_links.txt
2023-10-27T04:10:59,762   writing entry points to buscolite.egg-info/entry_points.txt
2023-10-27T04:10:59,763   writing requirements to buscolite.egg-info/requires.txt
2023-10-27T04:10:59,765   writing top-level names to buscolite.egg-info/top_level.txt
2023-10-27T04:10:59,791   reading manifest file 'buscolite.egg-info/SOURCES.txt'
2023-10-27T04:10:59,793   reading manifest template 'MANIFEST.in'
2023-10-27T04:10:59,794   adding license file 'LICENSE.md'
2023-10-27T04:10:59,797   writing manifest file 'buscolite.egg-info/SOURCES.txt'
2023-10-27T04:10:59,799   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'buscolite.data' is absent from the `packages` configuration.
2023-10-27T04:10:59,799   !!

2023-10-27T04:10:59,800           ********************************************************************************
2023-10-27T04:10:59,801           ############################
2023-10-27T04:10:59,801           # Package would be ignored #
2023-10-27T04:10:59,802           ############################
2023-10-27T04:10:59,802           Python recognizes 'buscolite.data' as an importable package[^1],
2023-10-27T04:10:59,802           but it is absent from setuptools' `packages` configuration.

2023-10-27T04:10:59,805           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-27T04:10:59,805           package, please make sure that 'buscolite.data' is explicitly added
2023-10-27T04:10:59,806           to the `packages` configuration field.

2023-10-27T04:10:59,807           Alternatively, you can also rely on setuptools' discovery methods
2023-10-27T04:10:59,808           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-27T04:10:59,811           instead of `find_packages(...)`/`find:`).

2023-10-27T04:10:59,812           You can read more about "package discovery" on setuptools documentation page:

2023-10-27T04:10:59,813           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-27T04:10:59,814           If you don't want 'buscolite.data' to be distributed and are
2023-10-27T04:10:59,814           already explicitly excluding 'buscolite.data' via
2023-10-27T04:10:59,815           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-27T04:10:59,815           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-27T04:10:59,816           combination with a more fine grained `package-data` configuration.

2023-10-27T04:10:59,817           You can read more about "package data files" on setuptools documentation page:

2023-10-27T04:10:59,818           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-27T04:10:59,819           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-27T04:10:59,820                 even if it does not contain any `.py` files.
2023-10-27T04:10:59,820                 On the other hand, currently there is no concept of package data
2023-10-27T04:10:59,821                 directory, all directories are treated like packages.
2023-10-27T04:10:59,821           ********************************************************************************

2023-10-27T04:10:59,822   !!
2023-10-27T04:10:59,823     check.warn(importable)
2023-10-27T04:10:59,824   creating build/lib/buscolite/data
2023-10-27T04:10:59,824   copying buscolite/data/EOG092C0B3U.prfl -> build/lib/buscolite/data
2023-10-27T04:10:59,825   copying buscolite/data/HsDHC.prfl -> build/lib/buscolite/data
2023-10-27T04:10:59,825   copying buscolite/data/busco_test.fa -> build/lib/buscolite/data
2023-10-27T04:10:59,826   copying buscolite/data/example.fa -> build/lib/buscolite/data
2023-10-27T04:10:59,845   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2023-10-27T04:10:59,846   !!

2023-10-27T04:10:59,847           ********************************************************************************
2023-10-27T04:10:59,848           Please avoid running ``setup.py`` directly.
2023-10-27T04:10:59,848           Instead, use pypa/build, pypa/installer or other
2023-10-27T04:10:59,848           standards-based tools.

2023-10-27T04:10:59,849           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2023-10-27T04:10:59,850           ********************************************************************************

2023-10-27T04:10:59,851   !!
2023-10-27T04:10:59,851     self.initialize_options()
2023-10-27T04:10:59,871   installing to build/bdist.linux-armv7l/wheel
2023-10-27T04:10:59,871   running install
2023-10-27T04:10:59,895   running install_lib
2023-10-27T04:10:59,920   creating build/bdist.linux-armv7l
2023-10-27T04:10:59,920   creating build/bdist.linux-armv7l/wheel
2023-10-27T04:10:59,922   creating build/bdist.linux-armv7l/wheel/buscolite
2023-10-27T04:10:59,923   creating build/bdist.linux-armv7l/wheel/buscolite/data
2023-10-27T04:10:59,924   copying build/lib/buscolite/data/example.fa -> build/bdist.linux-armv7l/wheel/buscolite/data
2023-10-27T04:10:59,927   copying build/lib/buscolite/data/EOG092C0B3U.prfl -> build/bdist.linux-armv7l/wheel/buscolite/data
2023-10-27T04:10:59,932   copying build/lib/buscolite/data/busco_test.fa -> build/bdist.linux-armv7l/wheel/buscolite/data
2023-10-27T04:10:59,934   copying build/lib/buscolite/data/HsDHC.prfl -> build/bdist.linux-armv7l/wheel/buscolite/data
2023-10-27T04:10:59,942   copying build/lib/buscolite/__init__.py -> build/bdist.linux-armv7l/wheel/buscolite
2023-10-27T04:10:59,944   copying build/lib/buscolite/__version__.py -> build/bdist.linux-armv7l/wheel/buscolite
2023-10-27T04:10:59,946   copying build/lib/buscolite/utilities.py -> build/bdist.linux-armv7l/wheel/buscolite
2023-10-27T04:10:59,948   copying build/lib/buscolite/log.py -> build/bdist.linux-armv7l/wheel/buscolite
2023-10-27T04:10:59,950   copying build/lib/buscolite/busco.py -> build/bdist.linux-armv7l/wheel/buscolite
2023-10-27T04:10:59,953   copying build/lib/buscolite/augustus.py -> build/bdist.linux-armv7l/wheel/buscolite
2023-10-27T04:10:59,955   copying build/lib/buscolite/search.py -> build/bdist.linux-armv7l/wheel/buscolite
2023-10-27T04:10:59,957   copying build/lib/buscolite/fasta.py -> build/bdist.linux-armv7l/wheel/buscolite
2023-10-27T04:10:59,960   copying build/lib/buscolite/fastx.py -> build/bdist.linux-armv7l/wheel/buscolite
2023-10-27T04:10:59,962   copying build/lib/buscolite/gff.py -> build/bdist.linux-armv7l/wheel/buscolite
2023-10-27T04:10:59,965   copying build/lib/buscolite/__main__.py -> build/bdist.linux-armv7l/wheel/buscolite
2023-10-27T04:10:59,967   copying build/lib/buscolite/help_formatter.py -> build/bdist.linux-armv7l/wheel/buscolite
2023-10-27T04:10:59,969   running install_egg_info
2023-10-27T04:10:59,999   Copying buscolite.egg-info to build/bdist.linux-armv7l/wheel/buscolite-23.10.26-py3.11.egg-info
2023-10-27T04:11:00,010   running install_scripts
2023-10-27T04:11:00,024   creating build/bdist.linux-armv7l/wheel/buscolite-23.10.26.dist-info/WHEEL
2023-10-27T04:11:00,026   creating '/tmp/pip-wheel-fjhao7ys/buscolite-23.10.26-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-10-27T04:11:00,028   adding 'buscolite/__init__.py'
2023-10-27T04:11:00,030   adding 'buscolite/__main__.py'
2023-10-27T04:11:00,032   adding 'buscolite/__version__.py'
2023-10-27T04:11:00,033   adding 'buscolite/augustus.py'
2023-10-27T04:11:00,036   adding 'buscolite/busco.py'
2023-10-27T04:11:00,038   adding 'buscolite/fasta.py'
2023-10-27T04:11:00,040   adding 'buscolite/fastx.py'
2023-10-27T04:11:00,043   adding 'buscolite/gff.py'
2023-10-27T04:11:00,045   adding 'buscolite/help_formatter.py'
2023-10-27T04:11:00,046   adding 'buscolite/log.py'
2023-10-27T04:11:00,049   adding 'buscolite/search.py'
2023-10-27T04:11:00,051   adding 'buscolite/utilities.py'
2023-10-27T04:11:00,076   adding 'buscolite/data/EOG092C0B3U.prfl'
2023-10-27T04:11:00,123   adding 'buscolite/data/HsDHC.prfl'
2023-10-27T04:11:00,127   adding 'buscolite/data/busco_test.fa'
2023-10-27T04:11:00,133   adding 'buscolite/data/example.fa'
2023-10-27T04:11:00,135   adding 'buscolite-23.10.26.dist-info/LICENSE.md'
2023-10-27T04:11:00,137   adding 'buscolite-23.10.26.dist-info/METADATA'
2023-10-27T04:11:00,138   adding 'buscolite-23.10.26.dist-info/WHEEL'
2023-10-27T04:11:00,139   adding 'buscolite-23.10.26.dist-info/entry_points.txt'
2023-10-27T04:11:00,140   adding 'buscolite-23.10.26.dist-info/top_level.txt'
2023-10-27T04:11:00,141   adding 'buscolite-23.10.26.dist-info/RECORD'
2023-10-27T04:11:00,145   removing build/bdist.linux-armv7l/wheel
2023-10-27T04:11:00,261   Building wheel for buscolite (setup.py): finished with status 'done'
2023-10-27T04:11:00,265   Created wheel for buscolite: filename=buscolite-23.10.26-py3-none-any.whl size=139591 sha256=4b9e72433a4ea3359f9ae010719e9bd2c22965d0853a0df221368d6073aa7a78
2023-10-27T04:11:00,267   Stored in directory: /tmp/pip-ephem-wheel-cache-3u96zixz/wheels/27/37/80/61ef06c0cf729c24afcf7d4badfd34c999fbc284ffd30fd5e2
2023-10-27T04:11:00,277 Successfully built buscolite
2023-10-27T04:11:00,285 Removed build tracker: '/tmp/pip-build-tracker-vq3d_5hg'