2023-10-27T17:25:09,401 Created temporary directory: /tmp/pip-build-tracker-4_oe917i
2023-10-27T17:25:09,402 Initialized build tracking at /tmp/pip-build-tracker-4_oe917i
2023-10-27T17:25:09,403 Created build tracker: /tmp/pip-build-tracker-4_oe917i
2023-10-27T17:25:09,403 Entered build tracker: /tmp/pip-build-tracker-4_oe917i
2023-10-27T17:25:09,404 Created temporary directory: /tmp/pip-wheel-1n_akn8q
2023-10-27T17:25:09,408 Created temporary directory: /tmp/pip-ephem-wheel-cache-y7uup3po
2023-10-27T17:25:09,431 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-10-27T17:25:09,435 2 location(s) to search for versions of dega:
2023-10-27T17:25:09,435 * https://pypi.org/simple/dega/
2023-10-27T17:25:09,435 * https://www.piwheels.org/simple/dega/
2023-10-27T17:25:09,435 Fetching project page and analyzing links: https://pypi.org/simple/dega/
2023-10-27T17:25:09,436 Getting page https://pypi.org/simple/dega/
2023-10-27T17:25:09,438 Found index url https://pypi.org/simple/
2023-10-27T17:25:09,653 Fetched page https://pypi.org/simple/dega/ as application/vnd.pypi.simple.v1+json
2023-10-27T17:25:09,655   Found link https://files.pythonhosted.org/packages/49/2f/3c450d945d51bd87cf49ef35ae5b7a20861932dbec95fa271a60f4955126/DEGA-0.1.0.tar.gz (from https://pypi.org/simple/dega/) (requires-python:>=3.8), version: 0.1.0
2023-10-27T17:25:09,656   Found link https://files.pythonhosted.org/packages/13/0b/eb063c3216c3402087cba94d05a65a659a8319148d65242e9ba81dc8cc16/DEGA-0.1.1.tar.gz (from https://pypi.org/simple/dega/) (requires-python:>=3.8), version: 0.1.1
2023-10-27T17:25:09,657   Found link https://files.pythonhosted.org/packages/61/33/97b21020d5e1478911bce462824afea4d161abb28337b2490c4883b5971e/DEGA-0.2.0.tar.gz (from https://pypi.org/simple/dega/) (requires-python:>=3.8), version: 0.2.0
2023-10-27T17:25:09,658 Fetching project page and analyzing links: https://www.piwheels.org/simple/dega/
2023-10-27T17:25:09,658 Getting page https://www.piwheels.org/simple/dega/
2023-10-27T17:25:09,660 Found index url https://www.piwheels.org/simple/
2023-10-27T17:25:09,832 Fetched page https://www.piwheels.org/simple/dega/ as text/html
2023-10-27T17:25:09,835   Skipping link: No binaries permitted for dega: https://www.piwheels.org/simple/dega/DEGA-0.1.1-cp39-cp39-linux_armv7l.whl#sha256=6d19f8ef3fbccbddb20f4bd92886b18c2454295092460eb1af32acb7ad43ae3a (from https://www.piwheels.org/simple/dega/) (requires-python:>=3.8)
2023-10-27T17:25:09,835   Skipping link: No binaries permitted for dega: https://www.piwheels.org/simple/dega/DEGA-0.1.1-cp39-cp39-linux_armv6l.whl#sha256=6d19f8ef3fbccbddb20f4bd92886b18c2454295092460eb1af32acb7ad43ae3a (from https://www.piwheels.org/simple/dega/) (requires-python:>=3.8)
2023-10-27T17:25:09,836   Skipping link: No binaries permitted for dega: https://www.piwheels.org/simple/dega/DEGA-0.1.0-cp39-cp39-linux_armv7l.whl#sha256=dcd87bc3cb799a959d3e16c571f4c5d65f392971fc680e9005acb4161fe52dd9 (from https://www.piwheels.org/simple/dega/) (requires-python:>=3.8)
2023-10-27T17:25:09,837   Skipping link: No binaries permitted for dega: https://www.piwheels.org/simple/dega/DEGA-0.1.0-cp39-cp39-linux_armv6l.whl#sha256=dcd87bc3cb799a959d3e16c571f4c5d65f392971fc680e9005acb4161fe52dd9 (from https://www.piwheels.org/simple/dega/) (requires-python:>=3.8)
2023-10-27T17:25:09,837 Skipping link: not a file: https://www.piwheels.org/simple/dega/
2023-10-27T17:25:09,838 Skipping link: not a file: https://pypi.org/simple/dega/
2023-10-27T17:25:09,857 Given no hashes to check 1 links for project 'dega': discarding no candidates
2023-10-27T17:25:09,875 Collecting dega==0.2.0
2023-10-27T17:25:09,878   Created temporary directory: /tmp/pip-unpack-eooedzif
2023-10-27T17:25:10,100   Downloading DEGA-0.2.0.tar.gz (585 kB)
2023-10-27T17:25:10,417   Added dega==0.2.0 from https://files.pythonhosted.org/packages/61/33/97b21020d5e1478911bce462824afea4d161abb28337b2490c4883b5971e/DEGA-0.2.0.tar.gz to build tracker '/tmp/pip-build-tracker-4_oe917i'
2023-10-27T17:25:10,425   Created temporary directory: /tmp/pip-build-env-vp8bcsog
2023-10-27T17:25:10,431   Installing build dependencies: started
2023-10-27T17:25:10,432   Running command pip subprocess to install build dependencies
2023-10-27T17:25:11,672   Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2023-10-27T17:25:12,202   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-10-27T17:25:13,799   Collecting setuptools
2023-10-27T17:25:13,870     Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.2.2-py3-none-any.whl (807 kB)
2023-10-27T17:25:14,100   Collecting wheel
2023-10-27T17:25:14,116     Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB)
2023-10-27T17:25:15,590   Collecting Cython
2023-10-27T17:25:16,435     Using cached https://www.piwheels.org/simple/cython/Cython-3.0.4-cp311-cp311-linux_armv7l.whl (11.7 MB)
2023-10-27T17:25:16,937   Collecting pythran
2023-10-27T17:25:17,269     Using cached https://www.piwheels.org/simple/pythran/pythran-0.14.0-py3-none-any.whl (4.3 MB)
2023-10-27T17:25:17,906     Link requires a different Python (3.11.2 not in: '>=3.7,<3.10'): https://files.pythonhosted.org/packages/99/f1/c00d6be56e1a718a3068079e3ec8ce044d7179345280f6a3f5066068af0d/scipy-1.6.2.tar.gz (from https://pypi.org/simple/scipy/) (requires-python:>=3.7,<3.10)
2023-10-27T17:25:17,911     Link requires a different Python (3.11.2 not in: '>=3.7,<3.10'): https://files.pythonhosted.org/packages/fe/fd/8704c7b7b34cdac850485e638346025ca57c5a859934b9aa1be5399b33b7/scipy-1.6.3.tar.gz (from https://pypi.org/simple/scipy/) (requires-python:>=3.7,<3.10)
2023-10-27T17:25:17,916     Link requires a different Python (3.11.2 not in: '>=3.7,<3.10'): https://files.pythonhosted.org/packages/bb/bb/944f559d554df6c9adf037aa9fc982a9706ee0e96c0d5beac701cb158900/scipy-1.7.0.tar.gz (from https://pypi.org/simple/scipy/) (requires-python:>=3.7,<3.10)
2023-10-27T17:25:17,921     Link requires a different Python (3.11.2 not in: '>=3.7,<3.10'): https://files.pythonhosted.org/packages/47/33/a24aec22b7be7fdb10ec117a95e1e4099890d8bbc6646902f443fc7719d1/scipy-1.7.1.tar.gz (from https://pypi.org/simple/scipy/) (requires-python:>=3.7,<3.10)
2023-10-27T17:25:17,927     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/0e/23/58c4f995475a2a97cb5f4a032aedaf881ad87cd976a7180c55118d105a1d/scipy-1.7.2.tar.gz (from https://pypi.org/simple/scipy/) (requires-python:>=3.7,<3.11)
2023-10-27T17:25:17,934     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/61/67/1a654b96309c991762ee9bc39c363fc618076b155fe52d295211cf2536c7/scipy-1.7.3.tar.gz (from https://pypi.org/simple/scipy/) (requires-python:>=3.7,<3.11)
2023-10-27T17:25:17,941     Link requires a different Python (3.11.2 not in: '>=3.8,<3.11'): https://files.pythonhosted.org/packages/c0/ad/e3c052ed4e0027a8abef0a5e8441a044427d252d17d9aee06d56e62fc698/scipy-1.8.0rc1.tar.gz (from https://pypi.org/simple/scipy/) (requires-python:>=3.8,<3.11)
2023-10-27T17:25:17,947     Link requires a different Python (3.11.2 not in: '>=3.8,<3.11'): https://files.pythonhosted.org/packages/29/d2/151a54944b333e465f98804dced31dab1284f3c37b752b9cefa710b64681/scipy-1.8.0rc2.tar.gz (from https://pypi.org/simple/scipy/) (requires-python:>=3.8,<3.11)
2023-10-27T17:25:17,953     Link requires a different Python (3.11.2 not in: '>=3.8,<3.11'): https://files.pythonhosted.org/packages/e4/26/83dd1c6378513a6241d984bda9f08c512b6e35fff13fba3acc1b3c195f02/scipy-1.8.0rc3.tar.gz (from https://pypi.org/simple/scipy/) (requires-python:>=3.8,<3.11)
2023-10-27T17:25:17,959     Link requires a different Python (3.11.2 not in: '>=3.8,<3.11'): https://files.pythonhosted.org/packages/22/78/056cc43e7737811b6f50886788a940f852773dd9804f5365952805db9648/scipy-1.8.0rc4.tar.gz (from https://pypi.org/simple/scipy/) (requires-python:>=3.8,<3.11)
2023-10-27T17:25:17,965     Link requires a different Python (3.11.2 not in: '>=3.8,<3.11'): https://files.pythonhosted.org/packages/b4/a2/4faa34bf0cdbefd5c706625f1234987795f368eb4e97bde9d6f46860843e/scipy-1.8.0.tar.gz (from https://pypi.org/simple/scipy/) (requires-python:>=3.8,<3.11)
2023-10-27T17:25:17,971     Link requires a different Python (3.11.2 not in: '>=3.8,<3.11'): https://files.pythonhosted.org/packages/26/b5/9330f004b9a3b2b6a31f59f46f1617ce9ca15c0e7fe64288c20385a05c9d/scipy-1.8.1.tar.gz (from https://pypi.org/simple/scipy/) (requires-python:>=3.8,<3.11)
2023-10-27T17:25:18,180   Collecting scipy
2023-10-27T17:25:22,976     Using cached https://www.piwheels.org/simple/scipy/scipy-1.11.3-cp311-cp311-linux_armv7l.whl (65.4 MB)
2023-10-27T17:25:25,519     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/3a/be/650f9c091ef71cb01d735775d554e068752d3ff63d7943b26316dc401749/numpy-1.21.2.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2023-10-27T17:25:25,526     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/5f/d6/ad58ded26556eaeaa8c971e08b6466f17c4ac4d786cd3d800e26ce59cc01/numpy-1.21.3.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2023-10-27T17:25:25,533     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/fb/48/b0708ebd7718a8933f0d3937513ef8ef2f4f04529f1f66ca86d873043921/numpy-1.21.4.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2023-10-27T17:25:25,540     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/c2/a8/a924a09492bdfee8c2ec3094d0a13f2799800b4fdc9c890738aeeb12c72e/numpy-1.21.5.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2023-10-27T17:25:25,547     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/45/b7/de7b8e67f2232c26af57c205aaad29fe17754f793404f59c8a730c7a191a/numpy-1.21.6.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2023-10-27T17:25:26,115   Collecting numpy
2023-10-27T17:25:27,471     Using cached https://www.piwheels.org/simple/numpy/numpy-1.26.1-cp311-cp311-linux_armv7l.whl (19.5 MB)
2023-10-27T17:25:28,262   Collecting ply>=3.4 (from pythran)
2023-10-27T17:25:28,282     Using cached https://www.piwheels.org/simple/ply/ply-3.11-py2.py3-none-any.whl (49 kB)
2023-10-27T17:25:28,396   Collecting gast~=0.5.0 (from pythran)
2023-10-27T17:25:28,415     Using cached https://www.piwheels.org/simple/gast/gast-0.5.4-py3-none-any.whl (19 kB)
2023-10-27T17:25:28,584   Collecting beniget~=0.4.0 (from pythran)
2023-10-27T17:25:28,603     Using cached https://www.piwheels.org/simple/beniget/beniget-0.4.1-py3-none-any.whl (9.5 kB)
2023-10-27T17:25:31,377   Installing collected packages: ply, wheel, setuptools, numpy, gast, Cython, scipy, beniget, pythran
2023-10-27T17:25:31,754     Creating /tmp/pip-build-env-vp8bcsog/overlay/local/bin
2023-10-27T17:25:31,756     changing mode of /tmp/pip-build-env-vp8bcsog/overlay/local/bin/wheel to 755
2023-10-27T17:25:42,196     changing mode of /tmp/pip-build-env-vp8bcsog/overlay/local/bin/f2py to 755
2023-10-27T17:25:45,927     changing mode of /tmp/pip-build-env-vp8bcsog/overlay/local/bin/cygdb to 755
2023-10-27T17:25:45,929     changing mode of /tmp/pip-build-env-vp8bcsog/overlay/local/bin/cython to 755
2023-10-27T17:25:45,932     changing mode of /tmp/pip-build-env-vp8bcsog/overlay/local/bin/cythonize to 755
2023-10-27T17:26:07,850     changing mode of /tmp/pip-build-env-vp8bcsog/overlay/local/bin/pythran to 755
2023-10-27T17:26:07,852     changing mode of /tmp/pip-build-env-vp8bcsog/overlay/local/bin/pythran-config to 755
2023-10-27T17:26:07,995   Successfully installed Cython-3.0.4 beniget-0.4.1 gast-0.5.4 numpy-1.26.1 ply-3.11 pythran-0.14.0 scipy-1.11.3 setuptools-68.2.2 wheel-0.41.2

2023-10-27T17:26:08,271   [notice] A new release of pip is available: 23.2.1 -> 23.3.1
2023-10-27T17:26:08,271   [notice] To update, run: python3 -m pip install --upgrade pip
2023-10-27T17:26:08,756   Installing build dependencies: finished with status 'done'
2023-10-27T17:26:08,760   Getting requirements to build wheel: started
2023-10-27T17:26:08,761   Running command Getting requirements to build wheel
2023-10-27T17:26:21,670   Compiling DEGA/cython/estimateDispersion.pyx because it depends on /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/scipy/special/cython_special.pxd.
2023-10-27T17:26:21,670   Compiling DEGA/cython/negativeBinomialGLM.pyx because it depends on /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libc/string.pxd.
2023-10-27T17:26:21,671   [1/2] Cythonizing DEGA/cython/estimateDispersion.pyx
2023-10-27T17:26:21,671   [2/2] Cythonizing DEGA/cython/negativeBinomialGLM.pyx
2023-10-27T17:26:21,740   /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:80: SetuptoolsWarning: `install_requires` overwritten in `pyproject.toml` (dependencies)
2023-10-27T17:26:21,741     corresp(dist, value, root_dir)
2023-10-27T17:26:21,849   running egg_info
2023-10-27T17:26:21,855   writing DEGA.egg-info/PKG-INFO
2023-10-27T17:26:21,860   writing dependency_links to DEGA.egg-info/dependency_links.txt
2023-10-27T17:26:21,862   writing requirements to DEGA.egg-info/requires.txt
2023-10-27T17:26:21,864   writing top-level names to DEGA.egg-info/top_level.txt
2023-10-27T17:26:21,890   dependency /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T17:26:21,891   dependency /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-27T17:26:21,891   dependency /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T17:26:21,892   dependency /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-27T17:26:21,892   dependency /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T17:26:21,893   dependency /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T17:26:21,894   dependency /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-27T17:26:21,894   dependency /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T17:26:21,895   dependency /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-27T17:26:21,896   dependency /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T17:26:21,900   reading manifest file 'DEGA.egg-info/SOURCES.txt'
2023-10-27T17:26:21,903   reading manifest template 'MANIFEST.in'
2023-10-27T17:26:21,910   warning: no previously-included files found matching 'DEGA/cython/setup.py'
2023-10-27T17:26:21,910   adding license file 'LICENSE'
2023-10-27T17:26:21,913   writing manifest file 'DEGA.egg-info/SOURCES.txt'
2023-10-27T17:26:23,015   Getting requirements to build wheel: finished with status 'done'
2023-10-27T17:26:23,032   Created temporary directory: /tmp/pip-modern-metadata-fib6i0fk
2023-10-27T17:26:23,035   Preparing metadata (pyproject.toml): started
2023-10-27T17:26:23,036   Running command Preparing metadata (pyproject.toml)
2023-10-27T17:26:25,170   /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:80: SetuptoolsWarning: `install_requires` overwritten in `pyproject.toml` (dependencies)
2023-10-27T17:26:25,170     corresp(dist, value, root_dir)
2023-10-27T17:26:25,272   running dist_info
2023-10-27T17:26:25,279   creating /tmp/pip-modern-metadata-fib6i0fk/DEGA.egg-info
2023-10-27T17:26:25,284   writing /tmp/pip-modern-metadata-fib6i0fk/DEGA.egg-info/PKG-INFO
2023-10-27T17:26:25,289   writing dependency_links to /tmp/pip-modern-metadata-fib6i0fk/DEGA.egg-info/dependency_links.txt
2023-10-27T17:26:25,291   writing requirements to /tmp/pip-modern-metadata-fib6i0fk/DEGA.egg-info/requires.txt
2023-10-27T17:26:25,292   writing top-level names to /tmp/pip-modern-metadata-fib6i0fk/DEGA.egg-info/top_level.txt
2023-10-27T17:26:25,293   writing manifest file '/tmp/pip-modern-metadata-fib6i0fk/DEGA.egg-info/SOURCES.txt'
2023-10-27T17:26:25,312   dependency /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T17:26:25,313   dependency /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-27T17:26:25,313   dependency /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T17:26:25,314   dependency /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-27T17:26:25,315   dependency /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T17:26:25,315   dependency /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T17:26:25,316   dependency /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-27T17:26:25,316   dependency /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T17:26:25,317   dependency /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-27T17:26:25,317   dependency /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T17:26:25,319   reading manifest file '/tmp/pip-modern-metadata-fib6i0fk/DEGA.egg-info/SOURCES.txt'
2023-10-27T17:26:25,321   reading manifest template 'MANIFEST.in'
2023-10-27T17:26:25,328   warning: no previously-included files found matching 'DEGA/cython/setup.py'
2023-10-27T17:26:25,329   adding license file 'LICENSE'
2023-10-27T17:26:25,331   writing manifest file '/tmp/pip-modern-metadata-fib6i0fk/DEGA.egg-info/SOURCES.txt'
2023-10-27T17:26:25,332   creating '/tmp/pip-modern-metadata-fib6i0fk/DEGA-0.2.0.dist-info'
2023-10-27T17:26:25,581   Preparing metadata (pyproject.toml): finished with status 'done'
2023-10-27T17:26:25,593   Source in /tmp/pip-wheel-1n_akn8q/dega_445173b0c5e54687a9fca73c1c0b8c4e has version 0.2.0, which satisfies requirement dega==0.2.0 from https://files.pythonhosted.org/packages/61/33/97b21020d5e1478911bce462824afea4d161abb28337b2490c4883b5971e/DEGA-0.2.0.tar.gz
2023-10-27T17:26:25,594   Removed dega==0.2.0 from https://files.pythonhosted.org/packages/61/33/97b21020d5e1478911bce462824afea4d161abb28337b2490c4883b5971e/DEGA-0.2.0.tar.gz from build tracker '/tmp/pip-build-tracker-4_oe917i'
2023-10-27T17:26:25,613 Created temporary directory: /tmp/pip-unpack-3cbpp1uj
2023-10-27T17:26:25,613 Created temporary directory: /tmp/pip-unpack-vvhxpzcz
2023-10-27T17:26:25,639 Building wheels for collected packages: dega
2023-10-27T17:26:25,644   Created temporary directory: /tmp/pip-wheel-mzfeqe3t
2023-10-27T17:26:25,645   Destination directory: /tmp/pip-wheel-mzfeqe3t
2023-10-27T17:26:25,647   Building wheel for dega (pyproject.toml): started
2023-10-27T17:26:25,648   Running command Building wheel for dega (pyproject.toml)
2023-10-27T17:26:27,653   /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:80: SetuptoolsWarning: `install_requires` overwritten in `pyproject.toml` (dependencies)
2023-10-27T17:26:27,653     corresp(dist, value, root_dir)
2023-10-27T17:26:27,746   running bdist_wheel
2023-10-27T17:26:27,773   running build
2023-10-27T17:26:27,774   running build_py
2023-10-27T17:26:27,780   creating build
2023-10-27T17:26:27,780   creating build/lib.linux-armv7l-cpython-311
2023-10-27T17:26:27,781   creating build/lib.linux-armv7l-cpython-311/DEGA
2023-10-27T17:26:27,782   copying DEGA/__init__.py -> build/lib.linux-armv7l-cpython-311/DEGA
2023-10-27T17:26:27,784   copying DEGA/statisticalTests.py -> build/lib.linux-armv7l-cpython-311/DEGA
2023-10-27T17:26:27,786   copying DEGA/logger.py -> build/lib.linux-armv7l-cpython-311/DEGA
2023-10-27T17:26:27,788   copying DEGA/refit.py -> build/lib.linux-armv7l-cpython-311/DEGA
2023-10-27T17:26:27,790   copying DEGA/utils.py -> build/lib.linux-armv7l-cpython-311/DEGA
2023-10-27T17:26:27,792   copying DEGA/SIDE.py -> build/lib.linux-armv7l-cpython-311/DEGA
2023-10-27T17:26:27,794   copying DEGA/dispersions.py -> build/lib.linux-armv7l-cpython-311/DEGA
2023-10-27T17:26:27,797   copying DEGA/countsTranformers.py -> build/lib.linux-armv7l-cpython-311/DEGA
2023-10-27T17:26:27,798   copying DEGA/plots.py -> build/lib.linux-armv7l-cpython-311/DEGA
2023-10-27T17:26:27,801   copying DEGA/core.py -> build/lib.linux-armv7l-cpython-311/DEGA
2023-10-27T17:26:27,805   running egg_info
2023-10-27T17:26:27,810   writing DEGA.egg-info/PKG-INFO
2023-10-27T17:26:27,814   writing dependency_links to DEGA.egg-info/dependency_links.txt
2023-10-27T17:26:27,815   writing requirements to DEGA.egg-info/requires.txt
2023-10-27T17:26:27,816   writing top-level names to DEGA.egg-info/top_level.txt
2023-10-27T17:26:27,820   dependency /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T17:26:27,821   dependency /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-27T17:26:27,822   dependency /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T17:26:27,822   dependency /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-27T17:26:27,823   dependency /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T17:26:27,823   dependency /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T17:26:27,824   dependency /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-27T17:26:27,825   dependency /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T17:26:27,825   dependency /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-27T17:26:27,826   dependency /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T17:26:27,827   reading manifest file 'DEGA.egg-info/SOURCES.txt'
2023-10-27T17:26:27,829   reading manifest template 'MANIFEST.in'
2023-10-27T17:26:27,835   warning: no previously-included files found matching 'DEGA/cython/setup.py'
2023-10-27T17:26:27,836   adding license file 'LICENSE'
2023-10-27T17:26:27,838   writing manifest file 'DEGA.egg-info/SOURCES.txt'
2023-10-27T17:26:27,839   creating build/lib.linux-armv7l-cpython-311/DEGA/cython
2023-10-27T17:26:27,840   copying DEGA/cython/estimateDispersion.cpp -> build/lib.linux-armv7l-cpython-311/DEGA/cython
2023-10-27T17:26:27,894   copying DEGA/cython/estimateDispersion.pyx -> build/lib.linux-armv7l-cpython-311/DEGA/cython
2023-10-27T17:26:27,897   copying DEGA/cython/negativeBinomialGLM.cpp -> build/lib.linux-armv7l-cpython-311/DEGA/cython
2023-10-27T17:26:27,928   copying DEGA/cython/negativeBinomialGLM.pyx -> build/lib.linux-armv7l-cpython-311/DEGA/cython
2023-10-27T17:26:27,933   running build_ext
2023-10-27T17:26:27,936   building 'DEGA.cython.estimateDispersion' extension
2023-10-27T17:26:27,943   INFO: C compiler: arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC

2023-10-27T17:26:27,945   creating build/temp.linux-armv7l-cpython-311
2023-10-27T17:26:27,945   creating build/temp.linux-armv7l-cpython-311/DEGA
2023-10-27T17:26:27,946   creating build/temp.linux-armv7l-cpython-311/DEGA/cython
2023-10-27T17:26:27,947   INFO: compile options: '-DENABLE_PYTHON_MODULE -D__PYTHRAN__=3 -DPYTHRAN_BLAS_BLAS -I/tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/pythran -I/tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/local/include -I/usr/include/python3.11 -c'
2023-10-27T17:26:27,947   extra options: '-std=c++11 -fno-math-errno -fno-wrapv -Wno-unused-function -Wno-int-in-bool-context -Wno-unknown-warning-option'
2023-10-27T17:26:27,948   INFO: arm-linux-gnueabihf-gcc: DEGA/cython/estimateDispersion.cpp
2023-10-27T17:26:28,423   In file included from /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-10-27T17:26:28,424                    from /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-10-27T17:26:28,424                    from /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-10-27T17:26:28,425                    from /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/pythran/pythonic/python/core.hpp:19,
2023-10-27T17:26:28,425                    from /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/pythran/pythonic/include/types/int.hpp:19,
2023-10-27T17:26:28,426                    from /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/pythran/pythonic/types/int.hpp:5,
2023-10-27T17:26:28,427                    from /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/pythran/pythonic/core.hpp:44,
2023-10-27T17:26:28,427                    from DEGA/cython/estimateDispersion.cpp:1213:
2023-10-27T17:26:28,428   /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-10-27T17:26:28,428      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-10-27T17:26:28,429         |  ^~~~~~~
2023-10-27T17:28:25,412   cc1plus: note: unrecognized command-line option ‘-Wno-unknown-warning-option’ may have been intended to silence earlier diagnostics
2023-10-27T17:28:31,032   INFO: arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/DEGA/cython/estimateDispersion.o -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lblas -lblas -o build/lib.linux-armv7l-cpython-311/DEGA/cython/estimateDispersion.cpython-311-arm-linux-gnueabihf.so -fvisibility=hidden -Wl,-strip-all
2023-10-27T17:28:31,312   building 'DEGA.cython.negativeBinomialGLM' extension
2023-10-27T17:28:31,313   INFO: C compiler: arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC

2023-10-27T17:28:31,314   INFO: compile options: '-DENABLE_PYTHON_MODULE -D__PYTHRAN__=3 -DPYTHRAN_BLAS_BLAS -I/tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/pythran -I/tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/local/include -I/usr/include/python3.11 -c'
2023-10-27T17:28:31,314   extra options: '-std=c++11 -fno-math-errno -fno-wrapv -Wno-unused-function -Wno-int-in-bool-context -Wno-unknown-warning-option'
2023-10-27T17:28:31,315   INFO: arm-linux-gnueabihf-gcc: DEGA/cython/negativeBinomialGLM.cpp
2023-10-27T17:28:31,719   In file included from /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-10-27T17:28:31,719                    from /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-10-27T17:28:31,720                    from /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-10-27T17:28:31,720                    from /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/pythran/pythonic/python/core.hpp:19,
2023-10-27T17:28:31,721                    from /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/pythran/pythonic/include/types/int.hpp:19,
2023-10-27T17:28:31,722                    from /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/pythran/pythonic/types/int.hpp:5,
2023-10-27T17:28:31,722                    from /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/pythran/pythonic/core.hpp:44,
2023-10-27T17:28:31,723                    from DEGA/cython/negativeBinomialGLM.cpp:1213:
2023-10-27T17:28:31,723   /tmp/pip-build-env-vp8bcsog/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-10-27T17:28:31,724      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-10-27T17:28:31,725         |  ^~~~~~~
2023-10-27T17:29:42,412   cc1plus: note: unrecognized command-line option ‘-Wno-unknown-warning-option’ may have been intended to silence earlier diagnostics
2023-10-27T17:29:45,396   INFO: arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/DEGA/cython/negativeBinomialGLM.o -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lblas -lblas -o build/lib.linux-armv7l-cpython-311/DEGA/cython/negativeBinomialGLM.cpython-311-arm-linux-gnueabihf.so -fvisibility=hidden -Wl,-strip-all
2023-10-27T17:29:45,669   installing to build/bdist.linux-armv7l/wheel
2023-10-27T17:29:45,670   running install
2023-10-27T17:29:45,693   running install_lib
2023-10-27T17:29:45,700   creating build/bdist.linux-armv7l
2023-10-27T17:29:45,700   creating build/bdist.linux-armv7l/wheel
2023-10-27T17:29:45,702   creating build/bdist.linux-armv7l/wheel/DEGA
2023-10-27T17:29:45,703   copying build/lib.linux-armv7l-cpython-311/DEGA/__init__.py -> build/bdist.linux-armv7l/wheel/DEGA
2023-10-27T17:29:45,705   copying build/lib.linux-armv7l-cpython-311/DEGA/statisticalTests.py -> build/bdist.linux-armv7l/wheel/DEGA
2023-10-27T17:29:45,707   copying build/lib.linux-armv7l-cpython-311/DEGA/logger.py -> build/bdist.linux-armv7l/wheel/DEGA
2023-10-27T17:29:45,709   copying build/lib.linux-armv7l-cpython-311/DEGA/refit.py -> build/bdist.linux-armv7l/wheel/DEGA
2023-10-27T17:29:45,711   copying build/lib.linux-armv7l-cpython-311/DEGA/utils.py -> build/bdist.linux-armv7l/wheel/DEGA
2023-10-27T17:29:45,714   copying build/lib.linux-armv7l-cpython-311/DEGA/SIDE.py -> build/bdist.linux-armv7l/wheel/DEGA
2023-10-27T17:29:45,718   copying build/lib.linux-armv7l-cpython-311/DEGA/dispersions.py -> build/bdist.linux-armv7l/wheel/DEGA
2023-10-27T17:29:45,724   copying build/lib.linux-armv7l-cpython-311/DEGA/countsTranformers.py -> build/bdist.linux-armv7l/wheel/DEGA
2023-10-27T17:29:45,729   copying build/lib.linux-armv7l-cpython-311/DEGA/plots.py -> build/bdist.linux-armv7l/wheel/DEGA
2023-10-27T17:29:45,735   creating build/bdist.linux-armv7l/wheel/DEGA/cython
2023-10-27T17:29:45,735   copying build/lib.linux-armv7l-cpython-311/DEGA/cython/negativeBinomialGLM.cpp -> build/bdist.linux-armv7l/wheel/DEGA/cython
2023-10-27T17:29:45,774   copying build/lib.linux-armv7l-cpython-311/DEGA/cython/estimateDispersion.cpp -> build/bdist.linux-armv7l/wheel/DEGA/cython
2023-10-27T17:29:45,825   copying build/lib.linux-armv7l-cpython-311/DEGA/cython/negativeBinomialGLM.pyx -> build/bdist.linux-armv7l/wheel/DEGA/cython
2023-10-27T17:29:45,829   copying build/lib.linux-armv7l-cpython-311/DEGA/cython/estimateDispersion.pyx -> build/bdist.linux-armv7l/wheel/DEGA/cython
2023-10-27T17:29:45,832   copying build/lib.linux-armv7l-cpython-311/DEGA/cython/estimateDispersion.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/DEGA/cython
2023-10-27T17:29:45,845   copying build/lib.linux-armv7l-cpython-311/DEGA/cython/negativeBinomialGLM.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/DEGA/cython
2023-10-27T17:29:45,853   copying build/lib.linux-armv7l-cpython-311/DEGA/core.py -> build/bdist.linux-armv7l/wheel/DEGA
2023-10-27T17:29:45,857   running install_egg_info
2023-10-27T17:29:45,863   Copying DEGA.egg-info to build/bdist.linux-armv7l/wheel/DEGA-0.2.0-py3.11.egg-info
2023-10-27T17:29:45,875   running install_scripts
2023-10-27T17:29:45,930   creating build/bdist.linux-armv7l/wheel/DEGA-0.2.0.dist-info/WHEEL
2023-10-27T17:29:45,932   creating '/tmp/pip-wheel-mzfeqe3t/.tmp-b44vak7h/DEGA-0.2.0-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-10-27T17:29:45,936   adding 'DEGA/SIDE.py'
2023-10-27T17:29:45,938   adding 'DEGA/__init__.py'
2023-10-27T17:29:45,945   adding 'DEGA/core.py'
2023-10-27T17:29:45,948   adding 'DEGA/countsTranformers.py'
2023-10-27T17:29:45,950   adding 'DEGA/dispersions.py'
2023-10-27T17:29:45,952   adding 'DEGA/logger.py'
2023-10-27T17:29:45,955   adding 'DEGA/plots.py'
2023-10-27T17:29:45,957   adding 'DEGA/refit.py'
2023-10-27T17:29:45,959   adding 'DEGA/statisticalTests.py'
2023-10-27T17:29:45,960   adding 'DEGA/utils.py'
2023-10-27T17:29:46,146   adding 'DEGA/cython/estimateDispersion.cpp'
2023-10-27T17:29:46,317   adding 'DEGA/cython/estimateDispersion.cpython-311-arm-linux-gnueabihf.so'
2023-10-27T17:29:46,324   adding 'DEGA/cython/estimateDispersion.pyx'
2023-10-27T17:29:46,455   adding 'DEGA/cython/negativeBinomialGLM.cpp'
2023-10-27T17:29:46,557   adding 'DEGA/cython/negativeBinomialGLM.cpython-311-arm-linux-gnueabihf.so'
2023-10-27T17:29:46,564   adding 'DEGA/cython/negativeBinomialGLM.pyx'
2023-10-27T17:29:46,571   adding 'DEGA-0.2.0.dist-info/LICENSE'
2023-10-27T17:29:46,578   adding 'DEGA-0.2.0.dist-info/METADATA'
2023-10-27T17:29:46,579   adding 'DEGA-0.2.0.dist-info/WHEEL'
2023-10-27T17:29:46,580   adding 'DEGA-0.2.0.dist-info/top_level.txt'
2023-10-27T17:29:46,581   adding 'DEGA-0.2.0.dist-info/RECORD'
2023-10-27T17:29:46,593   removing build/bdist.linux-armv7l/wheel
2023-10-27T17:29:46,811   Building wheel for dega (pyproject.toml): finished with status 'done'
2023-10-27T17:29:46,838   Created wheel for dega: filename=DEGA-0.2.0-cp311-cp311-linux_armv7l.whl size=1063876 sha256=0c1b31d6d238189230e2e94c484665d1662587a893e6f62cc7c52fc7ac39084f
2023-10-27T17:29:46,839   Stored in directory: /tmp/pip-ephem-wheel-cache-y7uup3po/wheels/db/c7/25/8297d408a99d8c4278112018a865c83319e6a7f5a0f8bcfb75
2023-10-27T17:29:46,872 Successfully built dega
2023-10-27T17:29:46,899 Removed build tracker: '/tmp/pip-build-tracker-4_oe917i'