2023-10-27T19:44:53,469 Created temporary directory: /tmp/pip-build-tracker-clts_ddh
2023-10-27T19:44:53,471 Initialized build tracking at /tmp/pip-build-tracker-clts_ddh
2023-10-27T19:44:53,471 Created build tracker: /tmp/pip-build-tracker-clts_ddh
2023-10-27T19:44:53,471 Entered build tracker: /tmp/pip-build-tracker-clts_ddh
2023-10-27T19:44:53,472 Created temporary directory: /tmp/pip-wheel-_04n4fbl
2023-10-27T19:44:53,476 Created temporary directory: /tmp/pip-ephem-wheel-cache-a5yuyxhg
2023-10-27T19:44:53,500 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-10-27T19:44:53,503 2 location(s) to search for versions of dega:
2023-10-27T19:44:53,503 * https://pypi.org/simple/dega/
2023-10-27T19:44:53,503 * https://www.piwheels.org/simple/dega/
2023-10-27T19:44:53,504 Fetching project page and analyzing links: https://pypi.org/simple/dega/
2023-10-27T19:44:53,504 Getting page https://pypi.org/simple/dega/
2023-10-27T19:44:53,506 Found index url https://pypi.org/simple/
2023-10-27T19:44:53,558 Fetched page https://pypi.org/simple/dega/ as application/vnd.pypi.simple.v1+json
2023-10-27T19:44:53,559   Found link https://files.pythonhosted.org/packages/49/2f/3c450d945d51bd87cf49ef35ae5b7a20861932dbec95fa271a60f4955126/DEGA-0.1.0.tar.gz (from https://pypi.org/simple/dega/) (requires-python:>=3.8), version: 0.1.0
2023-10-27T19:44:53,560   Found link https://files.pythonhosted.org/packages/13/0b/eb063c3216c3402087cba94d05a65a659a8319148d65242e9ba81dc8cc16/DEGA-0.1.1.tar.gz (from https://pypi.org/simple/dega/) (requires-python:>=3.8), version: 0.1.1
2023-10-27T19:44:53,560   Found link https://files.pythonhosted.org/packages/61/33/97b21020d5e1478911bce462824afea4d161abb28337b2490c4883b5971e/DEGA-0.2.0.tar.gz (from https://pypi.org/simple/dega/) (requires-python:>=3.8), version: 0.2.0
2023-10-27T19:44:53,561 Fetching project page and analyzing links: https://www.piwheels.org/simple/dega/
2023-10-27T19:44:53,561 Getting page https://www.piwheels.org/simple/dega/
2023-10-27T19:44:53,562 Found index url https://www.piwheels.org/simple/
2023-10-27T19:44:53,634 Fetched page https://www.piwheels.org/simple/dega/ as text/html
2023-10-27T19:44:53,637   Skipping link: No binaries permitted for dega: https://www.piwheels.org/simple/dega/DEGA-0.2.0-cp311-cp311-linux_armv7l.whl#sha256=0c1b31d6d238189230e2e94c484665d1662587a893e6f62cc7c52fc7ac39084f (from https://www.piwheels.org/simple/dega/) (requires-python:>=3.8)
2023-10-27T19:44:53,637   Skipping link: No binaries permitted for dega: https://www.piwheels.org/simple/dega/DEGA-0.2.0-cp311-cp311-linux_armv6l.whl#sha256=0c1b31d6d238189230e2e94c484665d1662587a893e6f62cc7c52fc7ac39084f (from https://www.piwheels.org/simple/dega/) (requires-python:>=3.8)
2023-10-27T19:44:53,637   Skipping link: No binaries permitted for dega: https://www.piwheels.org/simple/dega/DEGA-0.1.1-cp39-cp39-linux_armv7l.whl#sha256=6d19f8ef3fbccbddb20f4bd92886b18c2454295092460eb1af32acb7ad43ae3a (from https://www.piwheels.org/simple/dega/) (requires-python:>=3.8)
2023-10-27T19:44:53,638   Skipping link: No binaries permitted for dega: https://www.piwheels.org/simple/dega/DEGA-0.1.1-cp39-cp39-linux_armv6l.whl#sha256=6d19f8ef3fbccbddb20f4bd92886b18c2454295092460eb1af32acb7ad43ae3a (from https://www.piwheels.org/simple/dega/) (requires-python:>=3.8)
2023-10-27T19:44:53,638   Skipping link: No binaries permitted for dega: https://www.piwheels.org/simple/dega/DEGA-0.1.0-cp39-cp39-linux_armv7l.whl#sha256=dcd87bc3cb799a959d3e16c571f4c5d65f392971fc680e9005acb4161fe52dd9 (from https://www.piwheels.org/simple/dega/) (requires-python:>=3.8)
2023-10-27T19:44:53,638   Skipping link: No binaries permitted for dega: https://www.piwheels.org/simple/dega/DEGA-0.1.0-cp39-cp39-linux_armv6l.whl#sha256=dcd87bc3cb799a959d3e16c571f4c5d65f392971fc680e9005acb4161fe52dd9 (from https://www.piwheels.org/simple/dega/) (requires-python:>=3.8)
2023-10-27T19:44:53,638 Skipping link: not a file: https://www.piwheels.org/simple/dega/
2023-10-27T19:44:53,638 Skipping link: not a file: https://pypi.org/simple/dega/
2023-10-27T19:44:53,656 Given no hashes to check 1 links for project 'dega': discarding no candidates
2023-10-27T19:44:53,672 Collecting dega==0.2.0
2023-10-27T19:44:53,675   Created temporary directory: /tmp/pip-unpack-b0vxgtkn
2023-10-27T19:44:53,723   Downloading DEGA-0.2.0.tar.gz (585 kB)
2023-10-27T19:44:53,991   Added dega==0.2.0 from https://files.pythonhosted.org/packages/61/33/97b21020d5e1478911bce462824afea4d161abb28337b2490c4883b5971e/DEGA-0.2.0.tar.gz to build tracker '/tmp/pip-build-tracker-clts_ddh'
2023-10-27T19:44:54,002   Created temporary directory: /tmp/pip-build-env-670tg1ai
2023-10-27T19:44:54,016   Installing build dependencies: started
2023-10-27T19:44:54,017   Running command pip subprocess to install build dependencies
2023-10-27T19:44:55,195   Using pip 23.3.1 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9)
2023-10-27T19:44:55,732   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-10-27T19:44:57,155   Collecting setuptools
2023-10-27T19:44:57,172     Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.2.2-py3-none-any.whl (807 kB)
2023-10-27T19:44:57,410   Collecting wheel
2023-10-27T19:44:57,426     Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB)
2023-10-27T19:44:58,601   Collecting Cython
2023-10-27T19:44:58,618     Using cached https://www.piwheels.org/simple/cython/Cython-3.0.4-cp39-cp39-linux_armv7l.whl (10.7 MB)
2023-10-27T19:44:59,098   Collecting pythran
2023-10-27T19:44:59,113     Downloading https://www.piwheels.org/simple/pythran/pythran-0.14.0-py3-none-any.whl (4.3 MB)
2023-10-27T19:44:59,455        ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 4.3/4.3 MB 12.8 MB/s eta 0:00:00
2023-10-27T19:45:00,221   Collecting scipy
2023-10-27T19:45:00,240     Using cached https://www.piwheels.org/simple/scipy/scipy-1.11.3-cp39-cp39-linux_armv7l.whl (66.0 MB)
2023-10-27T19:45:03,704   Collecting numpy
2023-10-27T19:45:03,724     Using cached https://www.piwheels.org/simple/numpy/numpy-1.26.1-cp39-cp39-linux_armv7l.whl (19.4 MB)
2023-10-27T19:45:04,585   Collecting ply>=3.4 (from pythran)
2023-10-27T19:45:04,604     Using cached https://www.piwheels.org/simple/ply/ply-3.11-py2.py3-none-any.whl (49 kB)
2023-10-27T19:45:04,719   Collecting gast~=0.5.0 (from pythran)
2023-10-27T19:45:04,732     Downloading https://www.piwheels.org/simple/gast/gast-0.5.4-py3-none-any.whl (19 kB)
2023-10-27T19:45:04,907   Collecting beniget~=0.4.0 (from pythran)
2023-10-27T19:45:04,918     Downloading https://www.piwheels.org/simple/beniget/beniget-0.4.1-py3-none-any.whl (9.5 kB)
2023-10-27T19:45:06,860   Installing collected packages: ply, wheel, setuptools, numpy, gast, Cython, scipy, beniget, pythran
2023-10-27T19:45:07,227     Creating /tmp/pip-build-env-670tg1ai/overlay/bin
2023-10-27T19:45:07,229     changing mode of /tmp/pip-build-env-670tg1ai/overlay/bin/wheel to 755
2023-10-27T19:45:16,889     changing mode of /tmp/pip-build-env-670tg1ai/overlay/bin/f2py to 755
2023-10-27T19:45:20,400     changing mode of /tmp/pip-build-env-670tg1ai/overlay/bin/cygdb to 755
2023-10-27T19:45:20,402     changing mode of /tmp/pip-build-env-670tg1ai/overlay/bin/cython to 755
2023-10-27T19:45:20,404     changing mode of /tmp/pip-build-env-670tg1ai/overlay/bin/cythonize to 755
2023-10-27T19:45:41,316     changing mode of /tmp/pip-build-env-670tg1ai/overlay/bin/pythran to 755
2023-10-27T19:45:41,319     changing mode of /tmp/pip-build-env-670tg1ai/overlay/bin/pythran-config to 755
2023-10-27T19:45:41,417   Successfully installed Cython-3.0.4 beniget-0.4.1 gast-0.5.4 numpy-1.26.1 ply-3.11 pythran-0.14.0 scipy-1.11.3 setuptools-68.2.2 wheel-0.41.2
2023-10-27T19:45:42,099   Installing build dependencies: finished with status 'done'
2023-10-27T19:45:42,104   Getting requirements to build wheel: started
2023-10-27T19:45:42,105   Running command Getting requirements to build wheel
2023-10-27T19:45:55,858   Compiling DEGA/cython/estimateDispersion.pyx because it depends on /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/scipy/special/cython_special.pxd.
2023-10-27T19:45:55,858   Compiling DEGA/cython/negativeBinomialGLM.pyx because it depends on /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd.
2023-10-27T19:45:55,859   [1/2] Cythonizing DEGA/cython/estimateDispersion.pyx
2023-10-27T19:45:55,859   [2/2] Cythonizing DEGA/cython/negativeBinomialGLM.pyx
2023-10-27T19:45:55,940   /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:80: SetuptoolsWarning: `install_requires` overwritten in `pyproject.toml` (dependencies)
2023-10-27T19:45:55,940     corresp(dist, value, root_dir)
2023-10-27T19:45:56,055   running egg_info
2023-10-27T19:45:56,062   writing DEGA.egg-info/PKG-INFO
2023-10-27T19:45:56,067   writing dependency_links to DEGA.egg-info/dependency_links.txt
2023-10-27T19:45:56,070   writing requirements to DEGA.egg-info/requires.txt
2023-10-27T19:45:56,071   writing top-level names to DEGA.egg-info/top_level.txt
2023-10-27T19:45:56,096   dependency /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T19:45:56,096   dependency /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-27T19:45:56,097   dependency /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T19:45:56,097   dependency /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-27T19:45:56,097   dependency /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T19:45:56,097   dependency /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T19:45:56,097   dependency /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-27T19:45:56,097   dependency /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T19:45:56,097   dependency /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-27T19:45:56,098   dependency /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T19:45:56,103   reading manifest file 'DEGA.egg-info/SOURCES.txt'
2023-10-27T19:45:56,105   reading manifest template 'MANIFEST.in'
2023-10-27T19:45:56,112   warning: no previously-included files found matching 'DEGA/cython/setup.py'
2023-10-27T19:45:56,112   adding license file 'LICENSE'
2023-10-27T19:45:56,115   writing manifest file 'DEGA.egg-info/SOURCES.txt'
2023-10-27T19:45:57,180   Getting requirements to build wheel: finished with status 'done'
2023-10-27T19:45:57,192   Created temporary directory: /tmp/pip-modern-metadata-jsvlyq6d
2023-10-27T19:45:57,194   Preparing metadata (pyproject.toml): started
2023-10-27T19:45:57,195   Running command Preparing metadata (pyproject.toml)
2023-10-27T19:45:59,426   /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:80: SetuptoolsWarning: `install_requires` overwritten in `pyproject.toml` (dependencies)
2023-10-27T19:45:59,427     corresp(dist, value, root_dir)
2023-10-27T19:45:59,525   running dist_info
2023-10-27T19:45:59,533   creating /tmp/pip-modern-metadata-jsvlyq6d/DEGA.egg-info
2023-10-27T19:45:59,539   writing /tmp/pip-modern-metadata-jsvlyq6d/DEGA.egg-info/PKG-INFO
2023-10-27T19:45:59,546   writing dependency_links to /tmp/pip-modern-metadata-jsvlyq6d/DEGA.egg-info/dependency_links.txt
2023-10-27T19:45:59,549   writing requirements to /tmp/pip-modern-metadata-jsvlyq6d/DEGA.egg-info/requires.txt
2023-10-27T19:45:59,550   writing top-level names to /tmp/pip-modern-metadata-jsvlyq6d/DEGA.egg-info/top_level.txt
2023-10-27T19:45:59,552   writing manifest file '/tmp/pip-modern-metadata-jsvlyq6d/DEGA.egg-info/SOURCES.txt'
2023-10-27T19:45:59,792   dependency /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T19:45:59,793   dependency /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-27T19:45:59,793   dependency /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T19:45:59,793   dependency /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-27T19:45:59,793   dependency /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T19:45:59,793   dependency /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T19:45:59,793   dependency /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-27T19:45:59,794   dependency /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T19:45:59,794   dependency /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-27T19:45:59,794   dependency /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T19:45:59,799   reading manifest file '/tmp/pip-modern-metadata-jsvlyq6d/DEGA.egg-info/SOURCES.txt'
2023-10-27T19:45:59,801   reading manifest template 'MANIFEST.in'
2023-10-27T19:45:59,809   warning: no previously-included files found matching 'DEGA/cython/setup.py'
2023-10-27T19:45:59,809   adding license file 'LICENSE'
2023-10-27T19:45:59,811   writing manifest file '/tmp/pip-modern-metadata-jsvlyq6d/DEGA.egg-info/SOURCES.txt'
2023-10-27T19:45:59,812   creating '/tmp/pip-modern-metadata-jsvlyq6d/DEGA-0.2.0.dist-info'
2023-10-27T19:46:00,066   Preparing metadata (pyproject.toml): finished with status 'done'
2023-10-27T19:46:00,076   Source in /tmp/pip-wheel-_04n4fbl/dega_1b56399b7ea14da29fde92c50ae23611 has version 0.2.0, which satisfies requirement dega==0.2.0 from https://files.pythonhosted.org/packages/61/33/97b21020d5e1478911bce462824afea4d161abb28337b2490c4883b5971e/DEGA-0.2.0.tar.gz
2023-10-27T19:46:00,078   Removed dega==0.2.0 from https://files.pythonhosted.org/packages/61/33/97b21020d5e1478911bce462824afea4d161abb28337b2490c4883b5971e/DEGA-0.2.0.tar.gz from build tracker '/tmp/pip-build-tracker-clts_ddh'
2023-10-27T19:46:00,087 Created temporary directory: /tmp/pip-unpack-dy2ublnl
2023-10-27T19:46:00,088 Created temporary directory: /tmp/pip-unpack-_y2mu4ss
2023-10-27T19:46:00,108 Building wheels for collected packages: dega
2023-10-27T19:46:00,113   Created temporary directory: /tmp/pip-wheel-jsultd6u
2023-10-27T19:46:00,113   Destination directory: /tmp/pip-wheel-jsultd6u
2023-10-27T19:46:00,115   Building wheel for dega (pyproject.toml): started
2023-10-27T19:46:00,116   Running command Building wheel for dega (pyproject.toml)
2023-10-27T19:46:02,471   /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:80: SetuptoolsWarning: `install_requires` overwritten in `pyproject.toml` (dependencies)
2023-10-27T19:46:02,472     corresp(dist, value, root_dir)
2023-10-27T19:46:02,650   running bdist_wheel
2023-10-27T19:46:02,678   running build
2023-10-27T19:46:02,678   running build_py
2023-10-27T19:46:02,686   creating build
2023-10-27T19:46:02,687   creating build/lib.linux-armv7l-cpython-39
2023-10-27T19:46:02,687   creating build/lib.linux-armv7l-cpython-39/DEGA
2023-10-27T19:46:02,688   copying DEGA/plots.py -> build/lib.linux-armv7l-cpython-39/DEGA
2023-10-27T19:46:02,692   copying DEGA/logger.py -> build/lib.linux-armv7l-cpython-39/DEGA
2023-10-27T19:46:02,694   copying DEGA/utils.py -> build/lib.linux-armv7l-cpython-39/DEGA
2023-10-27T19:46:02,696   copying DEGA/countsTranformers.py -> build/lib.linux-armv7l-cpython-39/DEGA
2023-10-27T19:46:02,698   copying DEGA/SIDE.py -> build/lib.linux-armv7l-cpython-39/DEGA
2023-10-27T19:46:02,701   copying DEGA/statisticalTests.py -> build/lib.linux-armv7l-cpython-39/DEGA
2023-10-27T19:46:02,704   copying DEGA/dispersions.py -> build/lib.linux-armv7l-cpython-39/DEGA
2023-10-27T19:46:02,707   copying DEGA/__init__.py -> build/lib.linux-armv7l-cpython-39/DEGA
2023-10-27T19:46:02,710   copying DEGA/refit.py -> build/lib.linux-armv7l-cpython-39/DEGA
2023-10-27T19:46:02,714   copying DEGA/core.py -> build/lib.linux-armv7l-cpython-39/DEGA
2023-10-27T19:46:02,764   running egg_info
2023-10-27T19:46:02,772   writing DEGA.egg-info/PKG-INFO
2023-10-27T19:46:02,780   writing dependency_links to DEGA.egg-info/dependency_links.txt
2023-10-27T19:46:02,783   writing requirements to DEGA.egg-info/requires.txt
2023-10-27T19:46:02,784   writing top-level names to DEGA.egg-info/top_level.txt
2023-10-27T19:46:02,792   dependency /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T19:46:02,792   dependency /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-27T19:46:02,792   dependency /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T19:46:02,792   dependency /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-27T19:46:02,793   dependency /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T19:46:02,793   dependency /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T19:46:02,793   dependency /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-10-27T19:46:02,793   dependency /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T19:46:02,794   dependency /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-10-27T19:46:02,794   dependency /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-10-27T19:46:02,803   reading manifest file 'DEGA.egg-info/SOURCES.txt'
2023-10-27T19:46:02,806   reading manifest template 'MANIFEST.in'
2023-10-27T19:46:02,816   warning: no previously-included files found matching 'DEGA/cython/setup.py'
2023-10-27T19:46:02,816   adding license file 'LICENSE'
2023-10-27T19:46:02,820   writing manifest file 'DEGA.egg-info/SOURCES.txt'
2023-10-27T19:46:02,823   creating build/lib.linux-armv7l-cpython-39/DEGA/cython
2023-10-27T19:46:02,825   copying DEGA/cython/estimateDispersion.cpp -> build/lib.linux-armv7l-cpython-39/DEGA/cython
2023-10-27T19:46:02,901   copying DEGA/cython/estimateDispersion.pyx -> build/lib.linux-armv7l-cpython-39/DEGA/cython
2023-10-27T19:46:02,904   copying DEGA/cython/negativeBinomialGLM.cpp -> build/lib.linux-armv7l-cpython-39/DEGA/cython
2023-10-27T19:46:02,966   copying DEGA/cython/negativeBinomialGLM.pyx -> build/lib.linux-armv7l-cpython-39/DEGA/cython
2023-10-27T19:46:02,969   running build_ext
2023-10-27T19:46:02,972   building 'DEGA.cython.estimateDispersion' extension
2023-10-27T19:46:02,978   INFO: C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC

2023-10-27T19:46:02,979   creating build/temp.linux-armv7l-cpython-39
2023-10-27T19:46:02,979   creating build/temp.linux-armv7l-cpython-39/DEGA
2023-10-27T19:46:02,979   creating build/temp.linux-armv7l-cpython-39/DEGA/cython
2023-10-27T19:46:02,980   INFO: compile options: '-DENABLE_PYTHON_MODULE -D__PYTHRAN__=3 -DPYTHRAN_BLAS_BLAS -I/tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include -I/tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/pythran -I/tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include -I/usr/include/python3.9 -c'
2023-10-27T19:46:02,980   extra options: '-std=c++11 -fno-math-errno -fno-wrapv -Wno-unused-function -Wno-int-in-bool-context -Wno-unknown-warning-option'
2023-10-27T19:46:02,981   INFO: arm-linux-gnueabihf-gcc: DEGA/cython/estimateDispersion.cpp
2023-10-27T19:46:03,750   In file included from /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-10-27T19:46:03,750                    from /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-10-27T19:46:03,750                    from /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-10-27T19:46:03,750                    from /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/pythran/pythonic/python/core.hpp:19,
2023-10-27T19:46:03,751                    from /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/pythran/pythonic/include/types/int.hpp:19,
2023-10-27T19:46:03,751                    from /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/pythran/pythonic/types/int.hpp:5,
2023-10-27T19:46:03,751                    from /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/pythran/pythonic/core.hpp:44,
2023-10-27T19:46:03,751                    from DEGA/cython/estimateDispersion.cpp:1213:
2023-10-27T19:46:03,751   /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-10-27T19:46:03,751      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-10-27T19:46:03,751         |  ^~~~~~~
2023-10-27T19:47:51,267   cc1plus: note: unrecognized command-line option ‘-Wno-unknown-warning-option’ may have been intended to silence earlier diagnostics
2023-10-27T19:47:58,088   INFO: arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/DEGA/cython/estimateDispersion.o -L/usr/lib/arm-linux-gnueabihf -L/usr/lib -lblas -lblas -o build/lib.linux-armv7l-cpython-39/DEGA/cython/estimateDispersion.cpython-39-arm-linux-gnueabihf.so -fvisibility=hidden -Wl,-strip-all
2023-10-27T19:47:58,401   building 'DEGA.cython.negativeBinomialGLM' extension
2023-10-27T19:47:58,402   INFO: C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC

2023-10-27T19:47:58,402   INFO: compile options: '-DENABLE_PYTHON_MODULE -D__PYTHRAN__=3 -DPYTHRAN_BLAS_BLAS -I/tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include -I/tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/pythran -I/tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include -I/usr/include/python3.9 -c'
2023-10-27T19:47:58,402   extra options: '-std=c++11 -fno-math-errno -fno-wrapv -Wno-unused-function -Wno-int-in-bool-context -Wno-unknown-warning-option'
2023-10-27T19:47:58,403   INFO: arm-linux-gnueabihf-gcc: DEGA/cython/negativeBinomialGLM.cpp
2023-10-27T19:47:58,806   In file included from /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-10-27T19:47:58,806                    from /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-10-27T19:47:58,806                    from /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-10-27T19:47:58,806                    from /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/pythran/pythonic/python/core.hpp:19,
2023-10-27T19:47:58,806                    from /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/pythran/pythonic/include/types/int.hpp:19,
2023-10-27T19:47:58,807                    from /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/pythran/pythonic/types/int.hpp:5,
2023-10-27T19:47:58,807                    from /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/pythran/pythonic/core.hpp:44,
2023-10-27T19:47:58,807                    from DEGA/cython/negativeBinomialGLM.cpp:1213:
2023-10-27T19:47:58,807   /tmp/pip-build-env-670tg1ai/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-10-27T19:47:58,807      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-10-27T19:47:58,807         |  ^~~~~~~
2023-10-27T19:49:07,158   cc1plus: note: unrecognized command-line option ‘-Wno-unknown-warning-option’ may have been intended to silence earlier diagnostics
2023-10-27T19:49:10,469   INFO: arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/DEGA/cython/negativeBinomialGLM.o -L/usr/lib/arm-linux-gnueabihf -L/usr/lib -lblas -lblas -o build/lib.linux-armv7l-cpython-39/DEGA/cython/negativeBinomialGLM.cpython-39-arm-linux-gnueabihf.so -fvisibility=hidden -Wl,-strip-all
2023-10-27T19:49:10,773   installing to build/bdist.linux-armv7l/wheel
2023-10-27T19:49:10,773   running install
2023-10-27T19:49:10,799   running install_lib
2023-10-27T19:49:10,805   creating build/bdist.linux-armv7l
2023-10-27T19:49:10,806   creating build/bdist.linux-armv7l/wheel
2023-10-27T19:49:10,807   creating build/bdist.linux-armv7l/wheel/DEGA
2023-10-27T19:49:10,808   copying build/lib.linux-armv7l-cpython-39/DEGA/plots.py -> build/bdist.linux-armv7l/wheel/DEGA
2023-10-27T19:49:10,810   copying build/lib.linux-armv7l-cpython-39/DEGA/logger.py -> build/bdist.linux-armv7l/wheel/DEGA
2023-10-27T19:49:10,812   copying build/lib.linux-armv7l-cpython-39/DEGA/utils.py -> build/bdist.linux-armv7l/wheel/DEGA
2023-10-27T19:49:10,814   copying build/lib.linux-armv7l-cpython-39/DEGA/countsTranformers.py -> build/bdist.linux-armv7l/wheel/DEGA
2023-10-27T19:49:10,815   copying build/lib.linux-armv7l-cpython-39/DEGA/SIDE.py -> build/bdist.linux-armv7l/wheel/DEGA
2023-10-27T19:49:10,818   copying build/lib.linux-armv7l-cpython-39/DEGA/statisticalTests.py -> build/bdist.linux-armv7l/wheel/DEGA
2023-10-27T19:49:10,820   copying build/lib.linux-armv7l-cpython-39/DEGA/dispersions.py -> build/bdist.linux-armv7l/wheel/DEGA
2023-10-27T19:49:10,822   copying build/lib.linux-armv7l-cpython-39/DEGA/__init__.py -> build/bdist.linux-armv7l/wheel/DEGA
2023-10-27T19:49:10,824   copying build/lib.linux-armv7l-cpython-39/DEGA/refit.py -> build/bdist.linux-armv7l/wheel/DEGA
2023-10-27T19:49:10,826   creating build/bdist.linux-armv7l/wheel/DEGA/cython
2023-10-27T19:49:10,827   copying build/lib.linux-armv7l-cpython-39/DEGA/cython/estimateDispersion.pyx -> build/bdist.linux-armv7l/wheel/DEGA/cython
2023-10-27T19:49:10,829   copying build/lib.linux-armv7l-cpython-39/DEGA/cython/negativeBinomialGLM.pyx -> build/bdist.linux-armv7l/wheel/DEGA/cython
2023-10-27T19:49:10,831   copying build/lib.linux-armv7l-cpython-39/DEGA/cython/estimateDispersion.cpp -> build/bdist.linux-armv7l/wheel/DEGA/cython
2023-10-27T19:49:10,874   copying build/lib.linux-armv7l-cpython-39/DEGA/cython/negativeBinomialGLM.cpp -> build/bdist.linux-armv7l/wheel/DEGA/cython
2023-10-27T19:49:10,905   copying build/lib.linux-armv7l-cpython-39/DEGA/cython/estimateDispersion.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/DEGA/cython
2023-10-27T19:49:10,917   copying build/lib.linux-armv7l-cpython-39/DEGA/cython/negativeBinomialGLM.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/DEGA/cython
2023-10-27T19:49:10,926   copying build/lib.linux-armv7l-cpython-39/DEGA/core.py -> build/bdist.linux-armv7l/wheel/DEGA
2023-10-27T19:49:10,929   running install_egg_info
2023-10-27T19:49:10,935   Copying DEGA.egg-info to build/bdist.linux-armv7l/wheel/DEGA-0.2.0-py3.9.egg-info
2023-10-27T19:49:10,946   running install_scripts
2023-10-27T19:49:10,999   creating build/bdist.linux-armv7l/wheel/DEGA-0.2.0.dist-info/WHEEL
2023-10-27T19:49:11,002   creating '/tmp/pip-wheel-jsultd6u/.tmp-dmnq1zhp/DEGA-0.2.0-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-10-27T19:49:11,006   adding 'DEGA/SIDE.py'
2023-10-27T19:49:11,008   adding 'DEGA/__init__.py'
2023-10-27T19:49:11,015   adding 'DEGA/core.py'
2023-10-27T19:49:11,017   adding 'DEGA/countsTranformers.py'
2023-10-27T19:49:11,020   adding 'DEGA/dispersions.py'
2023-10-27T19:49:11,021   adding 'DEGA/logger.py'
2023-10-27T19:49:11,024   adding 'DEGA/plots.py'
2023-10-27T19:49:11,026   adding 'DEGA/refit.py'
2023-10-27T19:49:11,028   adding 'DEGA/statisticalTests.py'
2023-10-27T19:49:11,030   adding 'DEGA/utils.py'
2023-10-27T19:49:11,217   adding 'DEGA/cython/estimateDispersion.cpp'
2023-10-27T19:49:11,377   adding 'DEGA/cython/estimateDispersion.cpython-39-arm-linux-gnueabihf.so'
2023-10-27T19:49:11,383   adding 'DEGA/cython/estimateDispersion.pyx'
2023-10-27T19:49:11,513   adding 'DEGA/cython/negativeBinomialGLM.cpp'
2023-10-27T19:49:11,612   adding 'DEGA/cython/negativeBinomialGLM.cpython-39-arm-linux-gnueabihf.so'
2023-10-27T19:49:11,618   adding 'DEGA/cython/negativeBinomialGLM.pyx'
2023-10-27T19:49:11,625   adding 'DEGA-0.2.0.dist-info/LICENSE'
2023-10-27T19:49:11,632   adding 'DEGA-0.2.0.dist-info/METADATA'
2023-10-27T19:49:11,633   adding 'DEGA-0.2.0.dist-info/WHEEL'
2023-10-27T19:49:11,634   adding 'DEGA-0.2.0.dist-info/top_level.txt'
2023-10-27T19:49:11,635   adding 'DEGA-0.2.0.dist-info/RECORD'
2023-10-27T19:49:11,651   removing build/bdist.linux-armv7l/wheel
2023-10-27T19:49:11,844   Building wheel for dega (pyproject.toml): finished with status 'done'
2023-10-27T19:49:11,875   Created wheel for dega: filename=DEGA-0.2.0-cp39-cp39-linux_armv7l.whl size=1070109 sha256=49b77eb90fc056b2174a6f63823451f2cf92eb7275a949644f0e10c0ef4ec0d4
2023-10-27T19:49:11,876   Stored in directory: /tmp/pip-ephem-wheel-cache-a5yuyxhg/wheels/50/56/9b/31cd70ddf94b19449a43ad746bb9fefd9bd7de5e0000274c15
2023-10-27T19:49:11,894 Successfully built dega
2023-10-27T19:49:11,925 Removed build tracker: '/tmp/pip-build-tracker-clts_ddh'