2023-10-28T09:00:01,703 Created temporary directory: /tmp/pip-build-tracker-55ia88gh 2023-10-28T09:00:01,704 Initialized build tracking at /tmp/pip-build-tracker-55ia88gh 2023-10-28T09:00:01,705 Created build tracker: /tmp/pip-build-tracker-55ia88gh 2023-10-28T09:00:01,705 Entered build tracker: /tmp/pip-build-tracker-55ia88gh 2023-10-28T09:00:01,706 Created temporary directory: /tmp/pip-wheel-7l6cvfr5 2023-10-28T09:00:01,709 Created temporary directory: /tmp/pip-ephem-wheel-cache-bu0p18dm 2023-10-28T09:00:01,731 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-10-28T09:00:01,735 2 location(s) to search for versions of bioio: 2023-10-28T09:00:01,735 * https://pypi.org/simple/bioio/ 2023-10-28T09:00:01,735 * https://www.piwheels.org/simple/bioio/ 2023-10-28T09:00:01,736 Fetching project page and analyzing links: https://pypi.org/simple/bioio/ 2023-10-28T09:00:01,736 Getting page https://pypi.org/simple/bioio/ 2023-10-28T09:00:01,738 Found index url https://pypi.org/simple/ 2023-10-28T09:00:02,024 Fetched page https://pypi.org/simple/bioio/ as application/vnd.pypi.simple.v1+json 2023-10-28T09:00:02,025 Skipping link: No binaries permitted for bioio: https://files.pythonhosted.org/packages/ec/85/18a0360b412b68373b948dcfec4ca5cf06614323162dc1cf6e867582348a/bioio-0.0.1-py3-none-any.whl (from https://pypi.org/simple/bioio/) (requires-python:>=3.8) 2023-10-28T09:00:02,026 Found link https://files.pythonhosted.org/packages/9f/68/d7d74b861ab32b5ffc9908221dfd88c02852a0d59623e97717259f2e867f/bioio-0.0.1.tar.gz (from https://pypi.org/simple/bioio/) (requires-python:>=3.8), version: 0.0.1 2023-10-28T09:00:02,027 Skipping link: No binaries permitted for bioio: https://files.pythonhosted.org/packages/c0/45/cab49f617fbf376122ebf477da6f52efa1659b7cd9033d24e7d38bfb23fd/bioio-0.9.0-py3-none-any.whl (from https://pypi.org/simple/bioio/) (requires-python:>=3.9) 2023-10-28T09:00:02,028 Found link https://files.pythonhosted.org/packages/66/3a/d1f8296ee261b409702573edc3cda30e5ff3ede1674bc26821b4177f06d5/bioio-0.9.0.tar.gz (from https://pypi.org/simple/bioio/) (requires-python:>=3.9), version: 0.9.0 2023-10-28T09:00:02,029 Fetching project page and analyzing links: https://www.piwheels.org/simple/bioio/ 2023-10-28T09:00:02,030 Getting page https://www.piwheels.org/simple/bioio/ 2023-10-28T09:00:02,031 Found index url https://www.piwheels.org/simple/ 2023-10-28T09:00:02,255 Fetched page https://www.piwheels.org/simple/bioio/ as text/html 2023-10-28T09:00:02,257 Skipping link: No binaries permitted for bioio: https://www.piwheels.org/simple/bioio/bioio-0.0.1-py3-none-any.whl#sha256=4cf5623749a4c10aecaa4bc13a137106f7fc6e14af282a0f21ea0505ffe8cf85 (from https://www.piwheels.org/simple/bioio/) (requires-python:>=3.8) 2023-10-28T09:00:02,258 Skipping link: not a file: https://www.piwheels.org/simple/bioio/ 2023-10-28T09:00:02,258 Skipping link: not a file: https://pypi.org/simple/bioio/ 2023-10-28T09:00:02,285 Given no hashes to check 1 links for project 'bioio': discarding no candidates 2023-10-28T09:00:02,312 Collecting bioio==0.9.0 2023-10-28T09:00:02,315 Created temporary directory: /tmp/pip-unpack-7ttpjr_k 2023-10-28T09:00:02,551 Downloading bioio-0.9.0.tar.gz (43 kB) 2023-10-28T09:00:02,690 Added bioio==0.9.0 from https://files.pythonhosted.org/packages/66/3a/d1f8296ee261b409702573edc3cda30e5ff3ede1674bc26821b4177f06d5/bioio-0.9.0.tar.gz to build tracker '/tmp/pip-build-tracker-55ia88gh' 2023-10-28T09:00:02,699 Created temporary directory: /tmp/pip-build-env-jygtoz7f 2023-10-28T09:00:02,704 Installing build dependencies: started 2023-10-28T09:00:02,705 Running command pip subprocess to install build dependencies 2023-10-28T09:00:03,877 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-10-28T09:00:04,381 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-10-28T09:00:05,937 Collecting setuptools>=65 2023-10-28T09:00:06,008 Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.2.2-py3-none-any.whl (807 kB) 2023-10-28T09:00:06,244 Collecting wheel 2023-10-28T09:00:06,260 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB) 2023-10-28T09:00:06,570 Collecting setuptools_scm[toml]>=6.2 2023-10-28T09:00:06,586 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.0.4-py3-none-any.whl (42 kB) 2023-10-28T09:00:06,941 Collecting packaging>=20 (from setuptools_scm[toml]>=6.2) 2023-10-28T09:00:06,959 Using cached https://www.piwheels.org/simple/packaging/packaging-23.2-py3-none-any.whl (53 kB) 2023-10-28T09:00:07,077 Collecting typing-extensions (from setuptools_scm[toml]>=6.2) 2023-10-28T09:00:07,094 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.8.0-py3-none-any.whl (31 kB) 2023-10-28T09:00:09,657 Installing collected packages: wheel, typing-extensions, setuptools, packaging, setuptools_scm 2023-10-28T09:00:09,883 Creating /tmp/pip-build-env-jygtoz7f/overlay/local/bin 2023-10-28T09:00:09,885 changing mode of /tmp/pip-build-env-jygtoz7f/overlay/local/bin/wheel to 755 2023-10-28T09:00:14,928 Successfully installed packaging-23.2 setuptools-68.2.2 setuptools_scm-8.0.4 typing-extensions-4.8.0 wheel-0.41.2 2023-10-28T09:00:15,231 [notice] A new release of pip is available: 23.2.1 -> 23.3.1 2023-10-28T09:00:15,231 [notice] To update, run: python3 -m pip install --upgrade pip 2023-10-28T09:00:15,519 Installing build dependencies: finished with status 'done' 2023-10-28T09:00:15,522 Getting requirements to build wheel: started 2023-10-28T09:00:15,524 Running command Getting requirements to build wheel 2023-10-28T09:00:16,474 running egg_info 2023-10-28T09:00:16,479 writing bioio.egg-info/PKG-INFO 2023-10-28T09:00:16,488 writing dependency_links to bioio.egg-info/dependency_links.txt 2023-10-28T09:00:16,493 writing requirements to bioio.egg-info/requires.txt 2023-10-28T09:00:16,494 writing top-level names to bioio.egg-info/top_level.txt 2023-10-28T09:00:16,535 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2023-10-28T09:00:16,539 reading manifest file 'bioio.egg-info/SOURCES.txt' 2023-10-28T09:00:16,542 adding license file 'LICENSE' 2023-10-28T09:00:16,545 writing manifest file 'bioio.egg-info/SOURCES.txt' 2023-10-28T09:00:16,669 Getting requirements to build wheel: finished with status 'done' 2023-10-28T09:00:16,683 Created temporary directory: /tmp/pip-modern-metadata-jedhodlc 2023-10-28T09:00:16,686 Preparing metadata (pyproject.toml): started 2023-10-28T09:00:16,687 Running command Preparing metadata (pyproject.toml) 2023-10-28T09:00:17,544 running dist_info 2023-10-28T09:00:17,550 creating /tmp/pip-modern-metadata-jedhodlc/bioio.egg-info 2023-10-28T09:00:17,555 writing /tmp/pip-modern-metadata-jedhodlc/bioio.egg-info/PKG-INFO 2023-10-28T09:00:17,565 writing dependency_links to /tmp/pip-modern-metadata-jedhodlc/bioio.egg-info/dependency_links.txt 2023-10-28T09:00:17,570 writing requirements to /tmp/pip-modern-metadata-jedhodlc/bioio.egg-info/requires.txt 2023-10-28T09:00:17,571 writing top-level names to /tmp/pip-modern-metadata-jedhodlc/bioio.egg-info/top_level.txt 2023-10-28T09:00:17,573 writing manifest file '/tmp/pip-modern-metadata-jedhodlc/bioio.egg-info/SOURCES.txt' 2023-10-28T09:00:17,610 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2023-10-28T09:00:17,613 reading manifest file '/tmp/pip-modern-metadata-jedhodlc/bioio.egg-info/SOURCES.txt' 2023-10-28T09:00:17,615 adding license file 'LICENSE' 2023-10-28T09:00:17,618 writing manifest file '/tmp/pip-modern-metadata-jedhodlc/bioio.egg-info/SOURCES.txt' 2023-10-28T09:00:17,619 creating '/tmp/pip-modern-metadata-jedhodlc/bioio-0.9.0.dist-info' 2023-10-28T09:00:17,782 Preparing metadata (pyproject.toml): finished with status 'done' 2023-10-28T09:00:17,787 Source in /tmp/pip-wheel-7l6cvfr5/bioio_bbf89ce544a24d01aff1d52585e56f05 has version 0.9.0, which satisfies requirement bioio==0.9.0 from https://files.pythonhosted.org/packages/66/3a/d1f8296ee261b409702573edc3cda30e5ff3ede1674bc26821b4177f06d5/bioio-0.9.0.tar.gz 2023-10-28T09:00:17,788 Removed bioio==0.9.0 from https://files.pythonhosted.org/packages/66/3a/d1f8296ee261b409702573edc3cda30e5ff3ede1674bc26821b4177f06d5/bioio-0.9.0.tar.gz from build tracker '/tmp/pip-build-tracker-55ia88gh' 2023-10-28T09:00:17,794 Created temporary directory: /tmp/pip-unpack-2qqjd5sw 2023-10-28T09:00:17,795 Created temporary directory: /tmp/pip-unpack-oh814uj0 2023-10-28T09:00:17,849 Building wheels for collected packages: bioio 2023-10-28T09:00:17,853 Created temporary directory: /tmp/pip-wheel-se44vv7m 2023-10-28T09:00:17,854 Destination directory: /tmp/pip-wheel-se44vv7m 2023-10-28T09:00:17,856 Building wheel for bioio (pyproject.toml): started 2023-10-28T09:00:17,857 Running command Building wheel for bioio (pyproject.toml) 2023-10-28T09:00:18,687 running bdist_wheel 2023-10-28T09:00:18,710 running build 2023-10-28T09:00:18,710 running build_py 2023-10-28T09:00:18,716 creating build 2023-10-28T09:00:18,717 creating build/lib 2023-10-28T09:00:18,717 creating build/lib/bioio 2023-10-28T09:00:18,719 copying bioio/__init__.py -> build/lib/bioio 2023-10-28T09:00:18,721 copying bioio/bio_image.py -> build/lib/bioio 2023-10-28T09:00:18,724 copying bioio/ome_utils.py -> build/lib/bioio 2023-10-28T09:00:18,726 copying bioio/plugins.py -> build/lib/bioio 2023-10-28T09:00:18,729 creating build/lib/docs 2023-10-28T09:00:18,729 copying docs/conf.py -> build/lib/docs 2023-10-28T09:00:18,732 creating build/lib/bioio/writers 2023-10-28T09:00:18,733 copying bioio/writers/writer.py -> build/lib/bioio/writers 2023-10-28T09:00:18,735 copying bioio/writers/__init__.py -> build/lib/bioio/writers 2023-10-28T09:00:18,737 copying bioio/writers/ome_tiff_writer.py -> build/lib/bioio/writers 2023-10-28T09:00:18,739 copying bioio/writers/two_d_writer.py -> build/lib/bioio/writers 2023-10-28T09:00:18,742 copying bioio/writers/timeseries_writer.py -> build/lib/bioio/writers 2023-10-28T09:00:18,744 copying bioio/writers/ome_zarr_writer.py -> build/lib/bioio/writers 2023-10-28T09:00:18,747 creating build/lib/bioio/tests 2023-10-28T09:00:18,747 copying bioio/tests/__init__.py -> build/lib/bioio/tests 2023-10-28T09:00:18,749 copying bioio/tests/conftest.py -> build/lib/bioio/tests 2023-10-28T09:00:18,751 copying bioio/tests/test_bio_image.py -> build/lib/bioio/tests 2023-10-28T09:00:18,753 creating build/lib/bioio/tests/writers 2023-10-28T09:00:18,754 copying bioio/tests/writers/__init__.py -> build/lib/bioio/tests/writers 2023-10-28T09:00:18,756 copying bioio/tests/writers/test_timeseries_writer.py -> build/lib/bioio/tests/writers 2023-10-28T09:00:18,759 copying bioio/tests/writers/test_two_d_writer.py -> build/lib/bioio/tests/writers 2023-10-28T09:00:18,761 copying bioio/tests/writers/test_ome_zarr_writer.py -> build/lib/bioio/tests/writers 2023-10-28T09:00:18,763 copying bioio/tests/writers/test_ome_tiff_writer.py -> build/lib/bioio/tests/writers 2023-10-28T09:00:18,766 running egg_info 2023-10-28T09:00:18,772 writing bioio.egg-info/PKG-INFO 2023-10-28T09:00:18,780 writing dependency_links to bioio.egg-info/dependency_links.txt 2023-10-28T09:00:18,785 writing requirements to bioio.egg-info/requires.txt 2023-10-28T09:00:18,787 writing top-level names to bioio.egg-info/top_level.txt 2023-10-28T09:00:18,816 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2023-10-28T09:00:18,820 reading manifest file 'bioio.egg-info/SOURCES.txt' 2023-10-28T09:00:18,823 adding license file 'LICENSE' 2023-10-28T09:00:18,826 writing manifest file 'bioio.egg-info/SOURCES.txt' 2023-10-28T09:00:18,831 copying bioio/py.typed -> build/lib/bioio 2023-10-28T09:00:18,833 copying docs/contributing.rst -> build/lib/docs 2023-10-28T09:00:18,836 copying docs/index.rst -> build/lib/docs 2023-10-28T09:00:18,838 copying docs/installation.rst -> build/lib/docs 2023-10-28T09:00:18,851 installing to build/bdist.linux-armv7l/wheel 2023-10-28T09:00:18,852 running install 2023-10-28T09:00:18,877 running install_lib 2023-10-28T09:00:18,883 creating build/bdist.linux-armv7l 2023-10-28T09:00:18,884 creating build/bdist.linux-armv7l/wheel 2023-10-28T09:00:18,886 creating build/bdist.linux-armv7l/wheel/bioio 2023-10-28T09:00:18,887 copying build/lib/bioio/__init__.py -> build/bdist.linux-armv7l/wheel/bioio 2023-10-28T09:00:18,889 copying build/lib/bioio/py.typed -> build/bdist.linux-armv7l/wheel/bioio 2023-10-28T09:00:18,892 creating build/bdist.linux-armv7l/wheel/bioio/writers 2023-10-28T09:00:18,893 copying build/lib/bioio/writers/writer.py -> build/bdist.linux-armv7l/wheel/bioio/writers 2023-10-28T09:00:18,896 copying build/lib/bioio/writers/__init__.py -> build/bdist.linux-armv7l/wheel/bioio/writers 2023-10-28T09:00:18,898 copying build/lib/bioio/writers/ome_tiff_writer.py -> build/bdist.linux-armv7l/wheel/bioio/writers 2023-10-28T09:00:18,901 copying build/lib/bioio/writers/two_d_writer.py -> build/bdist.linux-armv7l/wheel/bioio/writers 2023-10-28T09:00:18,903 copying build/lib/bioio/writers/timeseries_writer.py -> build/bdist.linux-armv7l/wheel/bioio/writers 2023-10-28T09:00:18,906 copying build/lib/bioio/writers/ome_zarr_writer.py -> build/bdist.linux-armv7l/wheel/bioio/writers 2023-10-28T09:00:18,909 copying build/lib/bioio/bio_image.py -> build/bdist.linux-armv7l/wheel/bioio 2023-10-28T09:00:18,912 creating build/bdist.linux-armv7l/wheel/bioio/tests 2023-10-28T09:00:18,914 copying build/lib/bioio/tests/__init__.py -> build/bdist.linux-armv7l/wheel/bioio/tests 2023-10-28T09:00:18,916 creating build/bdist.linux-armv7l/wheel/bioio/tests/writers 2023-10-28T09:00:18,917 copying build/lib/bioio/tests/writers/__init__.py -> build/bdist.linux-armv7l/wheel/bioio/tests/writers 2023-10-28T09:00:18,920 copying build/lib/bioio/tests/writers/test_timeseries_writer.py -> build/bdist.linux-armv7l/wheel/bioio/tests/writers 2023-10-28T09:00:18,922 copying build/lib/bioio/tests/writers/test_two_d_writer.py -> build/bdist.linux-armv7l/wheel/bioio/tests/writers 2023-10-28T09:00:18,924 copying build/lib/bioio/tests/writers/test_ome_zarr_writer.py -> build/bdist.linux-armv7l/wheel/bioio/tests/writers 2023-10-28T09:00:18,927 copying build/lib/bioio/tests/writers/test_ome_tiff_writer.py -> build/bdist.linux-armv7l/wheel/bioio/tests/writers 2023-10-28T09:00:18,930 copying build/lib/bioio/tests/conftest.py -> build/bdist.linux-armv7l/wheel/bioio/tests 2023-10-28T09:00:18,932 copying build/lib/bioio/tests/test_bio_image.py -> build/bdist.linux-armv7l/wheel/bioio/tests 2023-10-28T09:00:18,934 copying build/lib/bioio/ome_utils.py -> build/bdist.linux-armv7l/wheel/bioio 2023-10-28T09:00:18,936 copying build/lib/bioio/plugins.py -> build/bdist.linux-armv7l/wheel/bioio 2023-10-28T09:00:18,939 creating build/bdist.linux-armv7l/wheel/docs 2023-10-28T09:00:18,940 copying build/lib/docs/index.rst -> build/bdist.linux-armv7l/wheel/docs 2023-10-28T09:00:18,943 copying build/lib/docs/installation.rst -> build/bdist.linux-armv7l/wheel/docs 2023-10-28T09:00:18,945 copying build/lib/docs/conf.py -> build/bdist.linux-armv7l/wheel/docs 2023-10-28T09:00:18,948 copying build/lib/docs/contributing.rst -> build/bdist.linux-armv7l/wheel/docs 2023-10-28T09:00:18,949 running install_egg_info 2023-10-28T09:00:18,955 Copying bioio.egg-info to build/bdist.linux-armv7l/wheel/bioio-0.9.0-py3.11.egg-info 2023-10-28T09:00:18,967 running install_scripts 2023-10-28T09:00:18,987 creating build/bdist.linux-armv7l/wheel/bioio-0.9.0.dist-info/WHEEL 2023-10-28T09:00:18,990 creating '/tmp/pip-wheel-se44vv7m/.tmp-g62mj43i/bioio-0.9.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-10-28T09:00:18,992 adding 'bioio/__init__.py' 2023-10-28T09:00:18,997 adding 'bioio/bio_image.py' 2023-10-28T09:00:18,999 adding 'bioio/ome_utils.py' 2023-10-28T09:00:19,001 adding 'bioio/plugins.py' 2023-10-28T09:00:19,003 adding 'bioio/py.typed' 2023-10-28T09:00:19,005 adding 'bioio/tests/__init__.py' 2023-10-28T09:00:19,007 adding 'bioio/tests/conftest.py' 2023-10-28T09:00:19,009 adding 'bioio/tests/test_bio_image.py' 2023-10-28T09:00:19,011 adding 'bioio/tests/writers/__init__.py' 2023-10-28T09:00:19,013 adding 'bioio/tests/writers/test_ome_tiff_writer.py' 2023-10-28T09:00:19,015 adding 'bioio/tests/writers/test_ome_zarr_writer.py' 2023-10-28T09:00:19,017 adding 'bioio/tests/writers/test_timeseries_writer.py' 2023-10-28T09:00:19,018 adding 'bioio/tests/writers/test_two_d_writer.py' 2023-10-28T09:00:19,020 adding 'bioio/writers/__init__.py' 2023-10-28T09:00:19,024 adding 'bioio/writers/ome_tiff_writer.py' 2023-10-28T09:00:19,027 adding 'bioio/writers/ome_zarr_writer.py' 2023-10-28T09:00:19,029 adding 'bioio/writers/timeseries_writer.py' 2023-10-28T09:00:19,031 adding 'bioio/writers/two_d_writer.py' 2023-10-28T09:00:19,033 adding 'bioio/writers/writer.py' 2023-10-28T09:00:19,036 adding 'docs/conf.py' 2023-10-28T09:00:19,037 adding 'docs/contributing.rst' 2023-10-28T09:00:19,039 adding 'docs/index.rst' 2023-10-28T09:00:19,040 adding 'docs/installation.rst' 2023-10-28T09:00:19,042 adding 'bioio-0.9.0.dist-info/LICENSE' 2023-10-28T09:00:19,043 adding 'bioio-0.9.0.dist-info/METADATA' 2023-10-28T09:00:19,045 adding 'bioio-0.9.0.dist-info/WHEEL' 2023-10-28T09:00:19,046 adding 'bioio-0.9.0.dist-info/top_level.txt' 2023-10-28T09:00:19,047 adding 'bioio-0.9.0.dist-info/RECORD' 2023-10-28T09:00:19,050 removing build/bdist.linux-armv7l/wheel 2023-10-28T09:00:19,185 Building wheel for bioio (pyproject.toml): finished with status 'done' 2023-10-28T09:00:19,190 Created wheel for bioio: filename=bioio-0.9.0-py3-none-any.whl size=43548 sha256=8f364e12cc93bff8588ec4abc17b7fee8259db430268d68dc0826b340cd12467 2023-10-28T09:00:19,191 Stored in directory: /tmp/pip-ephem-wheel-cache-bu0p18dm/wheels/39/83/83/e06f358aef2b6d88a54948d51c1e0667519d7a8dec54ede47e 2023-10-28T09:00:19,202 Successfully built bioio 2023-10-28T09:00:19,207 Removed build tracker: '/tmp/pip-build-tracker-55ia88gh'