2023-11-01T14:05:59,442 Created temporary directory: /tmp/pip-build-tracker-dwio6chv
2023-11-01T14:05:59,443 Initialized build tracking at /tmp/pip-build-tracker-dwio6chv
2023-11-01T14:05:59,444 Created build tracker: /tmp/pip-build-tracker-dwio6chv
2023-11-01T14:05:59,444 Entered build tracker: /tmp/pip-build-tracker-dwio6chv
2023-11-01T14:05:59,445 Created temporary directory: /tmp/pip-wheel-tnht4235
2023-11-01T14:05:59,448 Created temporary directory: /tmp/pip-ephem-wheel-cache-72svwcrf
2023-11-01T14:05:59,470 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-11-01T14:05:59,474 2 location(s) to search for versions of pybiotk:
2023-11-01T14:05:59,474 * https://pypi.org/simple/pybiotk/
2023-11-01T14:05:59,474 * https://www.piwheels.org/simple/pybiotk/
2023-11-01T14:05:59,475 Fetching project page and analyzing links: https://pypi.org/simple/pybiotk/
2023-11-01T14:05:59,476 Getting page https://pypi.org/simple/pybiotk/
2023-11-01T14:05:59,477 Found index url https://pypi.org/simple/
2023-11-01T14:05:59,702 Fetched page https://pypi.org/simple/pybiotk/ as application/vnd.pypi.simple.v1+json
2023-11-01T14:05:59,705   Found link https://files.pythonhosted.org/packages/36/39/63bca353f534b61d1b4d184594aa908e15c1ed647e1e722bfcf9ee064dbc/pybiotk-1.0.3.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.3
2023-11-01T14:05:59,706   Found link https://files.pythonhosted.org/packages/c2/63/fd2b3ca946c51dc23242f873ba230b22d55298bd2eb2df0fe06a648e6849/pybiotk-1.0.4.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.4
2023-11-01T14:05:59,707   Found link https://files.pythonhosted.org/packages/67/96/a92ce5cf084e83cb215b8d8e9656d5bcfe22ae834956bd208e796b50da16/pybiotk-1.0.6.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.6
2023-11-01T14:05:59,707   Found link https://files.pythonhosted.org/packages/be/b5/ff3128b3a5181f7169f2fb8072ae82e4589c45e3c08c3964fc77b897a8cf/pybiotk-1.0.7.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.7
2023-11-01T14:05:59,708   Found link https://files.pythonhosted.org/packages/b7/60/f27ad0c199d09158de9f172415057312c69a824f3589e43787ea24925448/pybiotk-1.0.8.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.8
2023-11-01T14:05:59,709   Found link https://files.pythonhosted.org/packages/fb/74/d26be594d8fc95a6bf87a98c26341ec248f2bb6fe50fa7a78419c8a152d9/pybiotk-1.0.9.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.9
2023-11-01T14:05:59,709   Found link https://files.pythonhosted.org/packages/23/04/fd2a2b3b3177b01265b141db5e1cd962f2e7d435a3cafb23631c2f22076c/pybiotk-1.1.0.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.1.0
2023-11-01T14:05:59,710   Found link https://files.pythonhosted.org/packages/01/7b/9e6f646c28b48a6ef9a434a1b8169c7ec6b8ee8e5ce135c6aa60284ddb84/pybiotk-1.1.1.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.1.1
2023-11-01T14:05:59,711   Found link https://files.pythonhosted.org/packages/f7/2d/b38d75abba8592955a86e4d86c64229b02b37582049427c21925443b1807/pybiotk-1.2.0.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.2.0
2023-11-01T14:05:59,712   Found link https://files.pythonhosted.org/packages/d3/45/4f60c095cbd938d73427d73089a67014adb3f91d0b4f5b0e52a815bd550e/pybiotk-1.2.1.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.2.1
2023-11-01T14:05:59,712   Found link https://files.pythonhosted.org/packages/df/39/c06c8538af00a45170fa6216e13703fefeee2b5b195227cacff55d94e8bb/pybiotk-1.2.3.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.2.3
2023-11-01T14:05:59,713   Found link https://files.pythonhosted.org/packages/fb/15/83e8498512e533c13bf14dd62b83cf20da537c315092519e3930e43b3950/pybiotk-1.2.5.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.2.5
2023-11-01T14:05:59,714 Fetching project page and analyzing links: https://www.piwheels.org/simple/pybiotk/
2023-11-01T14:05:59,715 Getting page https://www.piwheels.org/simple/pybiotk/
2023-11-01T14:05:59,716 Found index url https://www.piwheels.org/simple/
2023-11-01T14:05:59,882 Fetched page https://www.piwheels.org/simple/pybiotk/ as text/html
2023-11-01T14:05:59,894   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.3-cp39-cp39-linux_armv7l.whl#sha256=54c28aeaeafe285214b9a2178be151502a11de2b5c45205dffa54a5ab894ff63 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,895   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.3-cp39-cp39-linux_armv6l.whl#sha256=54c28aeaeafe285214b9a2178be151502a11de2b5c45205dffa54a5ab894ff63 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,896   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.3-cp37-cp37m-linux_armv7l.whl#sha256=32313431d1b6182a4d4b8c8e711fd436c3d3fcda71fa59e3e2b9d4910a0a88a6 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,896   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.3-cp37-cp37m-linux_armv6l.whl#sha256=32313431d1b6182a4d4b8c8e711fd436c3d3fcda71fa59e3e2b9d4910a0a88a6 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,897   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.3-cp311-cp311-linux_armv7l.whl#sha256=cc7472a20581c23d7a00b1692cea3fc0a2ecb8dbf8e578b9ab7dbb4701cb9af0 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,897   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.3-cp311-cp311-linux_armv6l.whl#sha256=cc7472a20581c23d7a00b1692cea3fc0a2ecb8dbf8e578b9ab7dbb4701cb9af0 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,898   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.1-cp311-cp311-linux_armv7l.whl#sha256=6ecaca9314ac09b750d05d10cdd652e3dd1ac2cc8f9936fccf0df1eb9dd29655 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,898   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.1-cp311-cp311-linux_armv6l.whl#sha256=6ecaca9314ac09b750d05d10cdd652e3dd1ac2cc8f9936fccf0df1eb9dd29655 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,899   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.1-cp39-cp39-linux_armv7l.whl#sha256=144a7a71ee8e0bf29c46cea279177232a94953f4771939ff86b411e2041a03a9 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,899   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.1-cp39-cp39-linux_armv6l.whl#sha256=144a7a71ee8e0bf29c46cea279177232a94953f4771939ff86b411e2041a03a9 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,900   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.1-cp37-cp37m-linux_armv7l.whl#sha256=62b6a1dac642a77187c5a163b17eefccf75b54ec85a4d6622363bb7814f1a565 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,901   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.1-cp37-cp37m-linux_armv6l.whl#sha256=62b6a1dac642a77187c5a163b17eefccf75b54ec85a4d6622363bb7814f1a565 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,901   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.0-cp39-cp39-linux_armv7l.whl#sha256=b554bf72c5b0bffe6c1e9a74088314014bb813c6d1d9b6578745e246a0d45687 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,902   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.0-cp39-cp39-linux_armv6l.whl#sha256=b554bf72c5b0bffe6c1e9a74088314014bb813c6d1d9b6578745e246a0d45687 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,902   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.0-cp37-cp37m-linux_armv7l.whl#sha256=9cb3556385c015ece339379fcda2d3dd46022b80c852672e839e31e0a308951e (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,903   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.0-cp37-cp37m-linux_armv6l.whl#sha256=9cb3556385c015ece339379fcda2d3dd46022b80c852672e839e31e0a308951e (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,904   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.1-cp39-cp39-linux_armv7l.whl#sha256=04ce4e8c36dacd8f0a727f6acb1cf990b425d3fcd6e1bc426bca2c316de0bcc8 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,904   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.1-cp39-cp39-linux_armv6l.whl#sha256=04ce4e8c36dacd8f0a727f6acb1cf990b425d3fcd6e1bc426bca2c316de0bcc8 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,905   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.1-cp37-cp37m-linux_armv7l.whl#sha256=f57da780847a57155b44aa2f7a6e328d345a0f30858083c6669c328b44f194a1 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,905   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.1-cp37-cp37m-linux_armv6l.whl#sha256=f57da780847a57155b44aa2f7a6e328d345a0f30858083c6669c328b44f194a1 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,906   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.0-cp39-cp39-linux_armv7l.whl#sha256=be8faf4c7b17f96a91c7104a7b5d093ce07c4e6ebd458f4501694a0a42c89881 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,906   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.0-cp39-cp39-linux_armv6l.whl#sha256=be8faf4c7b17f96a91c7104a7b5d093ce07c4e6ebd458f4501694a0a42c89881 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,907   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.0-cp37-cp37m-linux_armv7l.whl#sha256=fefc94e675065b00c116d2c61c64d178a20bee1079be65fa097b8f134fee5299 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,907   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.0-cp37-cp37m-linux_armv6l.whl#sha256=fefc94e675065b00c116d2c61c64d178a20bee1079be65fa097b8f134fee5299 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,908   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.9-cp39-cp39-linux_armv7l.whl#sha256=0b05bf968d17d6ee92be8bf21cf3991df7cb3b3d685fee09049dedb2f9d5ee7c (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,909   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.9-cp39-cp39-linux_armv6l.whl#sha256=0b05bf968d17d6ee92be8bf21cf3991df7cb3b3d685fee09049dedb2f9d5ee7c (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,909   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.9-cp37-cp37m-linux_armv7l.whl#sha256=be124f7f80c27462ab252101b8748b4825aa2718172dd154380e23d7f2dcb954 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,910   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.9-cp37-cp37m-linux_armv6l.whl#sha256=be124f7f80c27462ab252101b8748b4825aa2718172dd154380e23d7f2dcb954 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,910   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.8-cp39-cp39-linux_armv7l.whl#sha256=16889f2c9c5397540b9fa3bfa0396accff8dce33315140eb793f9bedb013c4ad (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,911   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.8-cp39-cp39-linux_armv6l.whl#sha256=16889f2c9c5397540b9fa3bfa0396accff8dce33315140eb793f9bedb013c4ad (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,912   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.8-cp37-cp37m-linux_armv7l.whl#sha256=ad3883b734204bdb7f690aa520d991f61667159590a41a71870dda41d888085d (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,912   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.8-cp37-cp37m-linux_armv6l.whl#sha256=ad3883b734204bdb7f690aa520d991f61667159590a41a71870dda41d888085d (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,913   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.7-cp39-cp39-linux_armv7l.whl#sha256=58efd8944f51edd73913001082ed31919eaa2a61cd84bab7f9b3d6dc4bb5147c (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,913   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.7-cp39-cp39-linux_armv6l.whl#sha256=58efd8944f51edd73913001082ed31919eaa2a61cd84bab7f9b3d6dc4bb5147c (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,914   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.7-cp37-cp37m-linux_armv7l.whl#sha256=b3374922018f96941d783f8fbd1419523636af0939729833084abfcbc2857815 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,914   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.7-cp37-cp37m-linux_armv6l.whl#sha256=b3374922018f96941d783f8fbd1419523636af0939729833084abfcbc2857815 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,915   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.6-cp39-cp39-linux_armv7l.whl#sha256=3ca3fc7f0e19a74789369a1ab6ee666b4658db1d6547739760037140b35b7e3e (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,915   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.6-cp39-cp39-linux_armv6l.whl#sha256=3ca3fc7f0e19a74789369a1ab6ee666b4658db1d6547739760037140b35b7e3e (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,916   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.6-cp37-cp37m-linux_armv7l.whl#sha256=c2c24578a8c96d074c91314ee034316b005ad82fe94da2f2135b6cca4237b374 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,917   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.6-cp37-cp37m-linux_armv6l.whl#sha256=c2c24578a8c96d074c91314ee034316b005ad82fe94da2f2135b6cca4237b374 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,917   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.4-cp39-cp39-linux_armv7l.whl#sha256=50c81a26e08771be990869c49acd65b172ef531d807be2ef54cc44de12463f76 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,918   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.4-cp39-cp39-linux_armv6l.whl#sha256=50c81a26e08771be990869c49acd65b172ef531d807be2ef54cc44de12463f76 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,918   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.4-cp37-cp37m-linux_armv7l.whl#sha256=1e5895fe1aa6a3e6127f180defd7a420edf6f8b5f4f1b689995f9758b7286846 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,919   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.4-cp37-cp37m-linux_armv6l.whl#sha256=1e5895fe1aa6a3e6127f180defd7a420edf6f8b5f4f1b689995f9758b7286846 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,919   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.3-cp39-cp39-linux_armv7l.whl#sha256=3d07a856b5dfd6012a973e73b174a6b8d70ae723b22a5396f9e1323a3396a327 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,920   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.3-cp39-cp39-linux_armv6l.whl#sha256=3d07a856b5dfd6012a973e73b174a6b8d70ae723b22a5396f9e1323a3396a327 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,921   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.3-cp37-cp37m-linux_armv7l.whl#sha256=68c34ca6656477c1de6691804d909876e1f42817256079672904805fc0971aca (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,921   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.3-cp37-cp37m-linux_armv6l.whl#sha256=68c34ca6656477c1de6691804d909876e1f42817256079672904805fc0971aca (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T14:05:59,922 Skipping link: not a file: https://www.piwheels.org/simple/pybiotk/
2023-11-01T14:05:59,922 Skipping link: not a file: https://pypi.org/simple/pybiotk/
2023-11-01T14:05:59,943 Given no hashes to check 1 links for project 'pybiotk': discarding no candidates
2023-11-01T14:05:59,963 Collecting pybiotk==1.2.5
2023-11-01T14:05:59,965   Created temporary directory: /tmp/pip-unpack-hr1ll1da
2023-11-01T14:06:00,261   Downloading pybiotk-1.2.5.tar.gz (99 kB)
2023-11-01T14:06:00,534   Added pybiotk==1.2.5 from https://files.pythonhosted.org/packages/fb/15/83e8498512e533c13bf14dd62b83cf20da537c315092519e3930e43b3950/pybiotk-1.2.5.tar.gz to build tracker '/tmp/pip-build-tracker-dwio6chv'
2023-11-01T14:06:00,541   Created temporary directory: /tmp/pip-build-env-59eyzorm
2023-11-01T14:06:00,546   Installing build dependencies: started
2023-11-01T14:06:00,547   Running command pip subprocess to install build dependencies
2023-11-01T14:06:01,721   Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2023-11-01T14:06:02,209   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-11-01T14:06:03,925   Collecting setuptools>=46.1.0
2023-11-01T14:06:04,011     Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.2.2-py3-none-any.whl (807 kB)
2023-11-01T14:06:04,358   Collecting setuptools_scm[toml]>=5
2023-11-01T14:06:04,376     Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.0.4-py3-none-any.whl (42 kB)
2023-11-01T14:06:04,628   Collecting wheel
2023-11-01T14:06:04,648     Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.3-py3-none-any.whl (65 kB)
2023-11-01T14:06:06,167   Collecting Cython<3.0.0,>=0.29.30
2023-11-01T14:06:06,168     Obtaining dependency information for Cython<3.0.0,>=0.29.30 from https://files.pythonhosted.org/packages/3f/d6/9eed523aeaca42acbaa3e6d3850edae780dc7f8da9df1bf6a2ceb851839c/Cython-0.29.36-py2.py3-none-any.whl.metadata
2023-11-01T14:06:06,176     Using cached Cython-0.29.36-py2.py3-none-any.whl.metadata (3.1 kB)
2023-11-01T14:06:06,572   Collecting packaging>=20 (from setuptools_scm[toml]>=5)
2023-11-01T14:06:06,588     Using cached https://www.piwheels.org/simple/packaging/packaging-23.2-py3-none-any.whl (53 kB)
2023-11-01T14:06:06,708   Collecting typing-extensions (from setuptools_scm[toml]>=5)
2023-11-01T14:06:06,723     Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.8.0-py3-none-any.whl (31 kB)
2023-11-01T14:06:06,817   Using cached Cython-0.29.36-py2.py3-none-any.whl (988 kB)
2023-11-01T14:06:09,286   Installing collected packages: wheel, typing-extensions, setuptools, packaging, Cython, setuptools_scm
2023-11-01T14:06:09,509     Creating /tmp/pip-build-env-59eyzorm/overlay/local/bin
2023-11-01T14:06:09,511     changing mode of /tmp/pip-build-env-59eyzorm/overlay/local/bin/wheel to 755
2023-11-01T14:06:14,291     changing mode of /tmp/pip-build-env-59eyzorm/overlay/local/bin/cygdb to 755
2023-11-01T14:06:14,293     changing mode of /tmp/pip-build-env-59eyzorm/overlay/local/bin/cython to 755
2023-11-01T14:06:14,296     changing mode of /tmp/pip-build-env-59eyzorm/overlay/local/bin/cythonize to 755
2023-11-01T14:06:14,541   Successfully installed Cython-0.29.36 packaging-23.2 setuptools-68.2.2 setuptools_scm-8.0.4 typing-extensions-4.8.0 wheel-0.41.3

2023-11-01T14:06:14,829   [notice] A new release of pip is available: 23.2.1 -> 23.3.1
2023-11-01T14:06:14,830   [notice] To update, run: python3 -m pip install --upgrade pip
2023-11-01T14:06:15,190   Installing build dependencies: finished with status 'done'
2023-11-01T14:06:15,193   Getting requirements to build wheel: started
2023-11-01T14:06:15,195   Running command Getting requirements to build wheel
2023-11-01T14:06:19,185   Compiling src/bx/bitset.pyx because it changed.
2023-11-01T14:06:19,185   Compiling src/bx/cluster.pyx because it changed.
2023-11-01T14:06:19,186   Compiling src/bx/intersection.pyx because it changed.
2023-11-01T14:06:19,186   [1/3] Cythonizing src/bx/bitset.pyx
2023-11-01T14:06:19,187   [2/3] Cythonizing src/bx/cluster.pyx
2023-11-01T14:06:19,187   [3/3] Cythonizing src/bx/intersection.pyx
2023-11-01T14:06:19,459   running egg_info
2023-11-01T14:06:19,466   writing src/pybiotk.egg-info/PKG-INFO
2023-11-01T14:06:19,471   writing dependency_links to src/pybiotk.egg-info/dependency_links.txt
2023-11-01T14:06:19,474   writing entry points to src/pybiotk.egg-info/entry_points.txt
2023-11-01T14:06:19,476   writing requirements to src/pybiotk.egg-info/requires.txt
2023-11-01T14:06:19,478   writing top-level names to src/pybiotk.egg-info/top_level.txt
2023-11-01T14:06:19,548   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2023-11-01T14:06:19,553   reading manifest file 'src/pybiotk.egg-info/SOURCES.txt'
2023-11-01T14:06:19,559   adding license file 'LICENSE.txt'
2023-11-01T14:06:19,565   writing manifest file 'src/pybiotk.egg-info/SOURCES.txt'
2023-11-01T14:06:19,726   Getting requirements to build wheel: finished with status 'done'
2023-11-01T14:06:19,741   Created temporary directory: /tmp/pip-modern-metadata-am9wgelc
2023-11-01T14:06:19,743   Preparing metadata (pyproject.toml): started
2023-11-01T14:06:19,744   Running command Preparing metadata (pyproject.toml)
2023-11-01T14:06:20,973   running dist_info
2023-11-01T14:06:20,993   creating /tmp/pip-modern-metadata-am9wgelc/pybiotk.egg-info
2023-11-01T14:06:20,999   writing /tmp/pip-modern-metadata-am9wgelc/pybiotk.egg-info/PKG-INFO
2023-11-01T14:06:21,004   writing dependency_links to /tmp/pip-modern-metadata-am9wgelc/pybiotk.egg-info/dependency_links.txt
2023-11-01T14:06:21,007   writing entry points to /tmp/pip-modern-metadata-am9wgelc/pybiotk.egg-info/entry_points.txt
2023-11-01T14:06:21,009   writing requirements to /tmp/pip-modern-metadata-am9wgelc/pybiotk.egg-info/requires.txt
2023-11-01T14:06:21,010   writing top-level names to /tmp/pip-modern-metadata-am9wgelc/pybiotk.egg-info/top_level.txt
2023-11-01T14:06:21,011   writing manifest file '/tmp/pip-modern-metadata-am9wgelc/pybiotk.egg-info/SOURCES.txt'
2023-11-01T14:06:21,071   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2023-11-01T14:06:21,074   reading manifest file '/tmp/pip-modern-metadata-am9wgelc/pybiotk.egg-info/SOURCES.txt'
2023-11-01T14:06:21,076   adding license file 'LICENSE.txt'
2023-11-01T14:06:21,081   writing manifest file '/tmp/pip-modern-metadata-am9wgelc/pybiotk.egg-info/SOURCES.txt'
2023-11-01T14:06:21,082   creating '/tmp/pip-modern-metadata-am9wgelc/pybiotk-1.2.5.dist-info'
2023-11-01T14:06:21,300   Preparing metadata (pyproject.toml): finished with status 'done'
2023-11-01T14:06:21,305   Source in /tmp/pip-wheel-tnht4235/pybiotk_46f733566a214f0b83906eb2d38485db has version 1.2.5, which satisfies requirement pybiotk==1.2.5 from https://files.pythonhosted.org/packages/fb/15/83e8498512e533c13bf14dd62b83cf20da537c315092519e3930e43b3950/pybiotk-1.2.5.tar.gz
2023-11-01T14:06:21,305   Removed pybiotk==1.2.5 from https://files.pythonhosted.org/packages/fb/15/83e8498512e533c13bf14dd62b83cf20da537c315092519e3930e43b3950/pybiotk-1.2.5.tar.gz from build tracker '/tmp/pip-build-tracker-dwio6chv'
2023-11-01T14:06:21,310 Created temporary directory: /tmp/pip-unpack-knp08yc0
2023-11-01T14:06:21,311 Created temporary directory: /tmp/pip-unpack-5w60bp3n
2023-11-01T14:06:21,329 Building wheels for collected packages: pybiotk
2023-11-01T14:06:21,333   Created temporary directory: /tmp/pip-wheel-oytir445
2023-11-01T14:06:21,334   Destination directory: /tmp/pip-wheel-oytir445
2023-11-01T14:06:21,336   Building wheel for pybiotk (pyproject.toml): started
2023-11-01T14:06:21,337   Running command Building wheel for pybiotk (pyproject.toml)
2023-11-01T14:06:22,592   running bdist_wheel
2023-11-01T14:06:22,633   running build
2023-11-01T14:06:22,633   running build_py
2023-11-01T14:06:22,642   creating build/lib.linux-armv7l-cpython-311
2023-11-01T14:06:22,642   creating build/lib.linux-armv7l-cpython-311/stream
2023-11-01T14:06:22,643   copying src/stream/__init__.py -> build/lib.linux-armv7l-cpython-311/stream
2023-11-01T14:06:22,645   copying src/stream/pipe.py -> build/lib.linux-armv7l-cpython-311/stream
2023-11-01T14:06:22,647   copying src/stream/stream.py -> build/lib.linux-armv7l-cpython-311/stream
2023-11-01T14:06:22,650   creating build/lib.linux-armv7l-cpython-311/pybiotk
2023-11-01T14:06:22,651   copying src/pybiotk/__init__.py -> build/lib.linux-armv7l-cpython-311/pybiotk
2023-11-01T14:06:22,653   creating build/lib.linux-armv7l-cpython-311/pybiotk/utils
2023-11-01T14:06:22,654   copying src/pybiotk/utils/merge_row.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2023-11-01T14:06:22,656   copying src/pybiotk/utils/fastx_rename.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2023-11-01T14:06:22,658   copying src/pybiotk/utils/fasta_filter.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2023-11-01T14:06:22,660   copying src/pybiotk/utils/summary_log.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2023-11-01T14:06:22,662   copying src/pybiotk/utils/fragment_size.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2023-11-01T14:06:22,664   copying src/pybiotk/utils/merge_subseq.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2023-11-01T14:06:22,666   copying src/pybiotk/utils/subseq_analysis.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2023-11-01T14:06:22,668   copying src/pybiotk/utils/seq_random.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2023-11-01T14:06:22,670   copying src/pybiotk/utils/__init__.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2023-11-01T14:06:22,671   copying src/pybiotk/utils/fastq_uniq.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2023-11-01T14:06:22,673   copying src/pybiotk/utils/read_tables.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2023-11-01T14:06:22,675   copying src/pybiotk/utils/gtf_filter.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2023-11-01T14:06:22,677   copying src/pybiotk/utils/pyanno.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2023-11-01T14:06:22,679   copying src/pybiotk/utils/genomefetcher.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2023-11-01T14:06:22,681   copying src/pybiotk/utils/rmats_filter.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2023-11-01T14:06:22,683   copying src/pybiotk/utils/fastq_join.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2023-11-01T14:06:22,685   copying src/pybiotk/utils/utils.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2023-11-01T14:06:22,687   copying src/pybiotk/utils/bam_random.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2023-11-01T14:06:22,689   copying src/pybiotk/utils/reverse_fastx.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2023-11-01T14:06:22,690   copying src/pybiotk/utils/reference_count.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2023-11-01T14:06:22,692   copying src/pybiotk/utils/normalize.py -> build/lib.linux-armv7l-cpython-311/pybiotk/utils
2023-11-01T14:06:22,695   creating build/lib.linux-armv7l-cpython-311/pybiotk/convert
2023-11-01T14:06:22,696   copying src/pybiotk/convert/fa2fastq.py -> build/lib.linux-armv7l-cpython-311/pybiotk/convert
2023-11-01T14:06:22,697   copying src/pybiotk/convert/fq2fasta.py -> build/lib.linux-armv7l-cpython-311/pybiotk/convert
2023-11-01T14:06:22,699   copying src/pybiotk/convert/__init__.py -> build/lib.linux-armv7l-cpython-311/pybiotk/convert
2023-11-01T14:06:22,700   copying src/pybiotk/convert/bam2fastx.py -> build/lib.linux-armv7l-cpython-311/pybiotk/convert
2023-11-01T14:06:22,702   copying src/pybiotk/convert/gtf2bed.py -> build/lib.linux-armv7l-cpython-311/pybiotk/convert
2023-11-01T14:06:22,704   copying src/pybiotk/convert/bampe_order_by_name.py -> build/lib.linux-armv7l-cpython-311/pybiotk/convert
2023-11-01T14:06:22,705   copying src/pybiotk/convert/bed2bedgraph.py -> build/lib.linux-armv7l-cpython-311/pybiotk/convert
2023-11-01T14:06:22,707   creating build/lib.linux-armv7l-cpython-311/pybiotk/intervals
2023-11-01T14:06:22,708   copying src/pybiotk/intervals/__init__.py -> build/lib.linux-armv7l-cpython-311/pybiotk/intervals
2023-11-01T14:06:22,710   copying src/pybiotk/intervals/grange.py -> build/lib.linux-armv7l-cpython-311/pybiotk/intervals
2023-11-01T14:06:22,712   copying src/pybiotk/intervals/merge_bed3.py -> build/lib.linux-armv7l-cpython-311/pybiotk/intervals
2023-11-01T14:06:22,714   copying src/pybiotk/intervals/merge_intervals.py -> build/lib.linux-armv7l-cpython-311/pybiotk/intervals
2023-11-01T14:06:22,716   creating build/lib.linux-armv7l-cpython-311/pybiotk/io
2023-11-01T14:06:22,717   copying src/pybiotk/io/bed.py -> build/lib.linux-armv7l-cpython-311/pybiotk/io
2023-11-01T14:06:22,719   copying src/pybiotk/io/__init__.py -> build/lib.linux-armv7l-cpython-311/pybiotk/io
2023-11-01T14:06:22,720   copying src/pybiotk/io/gtf.py -> build/lib.linux-armv7l-cpython-311/pybiotk/io
2023-11-01T14:06:22,723   copying src/pybiotk/io/bam.py -> build/lib.linux-armv7l-cpython-311/pybiotk/io
2023-11-01T14:06:22,725   copying src/pybiotk/io/fasta.py -> build/lib.linux-armv7l-cpython-311/pybiotk/io
2023-11-01T14:06:22,727   copying src/pybiotk/io/fastq.py -> build/lib.linux-armv7l-cpython-311/pybiotk/io
2023-11-01T14:06:22,729   copying src/pybiotk/io/bw.py -> build/lib.linux-armv7l-cpython-311/pybiotk/io
2023-11-01T14:06:22,732   creating build/lib.linux-armv7l-cpython-311/pybiotk/annodb
2023-11-01T14:06:22,733   copying src/pybiotk/annodb/anno.py -> build/lib.linux-armv7l-cpython-311/pybiotk/annodb
2023-11-01T14:06:22,735   copying src/pybiotk/annodb/__init__.py -> build/lib.linux-armv7l-cpython-311/pybiotk/annodb
2023-11-01T14:06:22,737   copying src/pybiotk/annodb/merged_transcript.py -> build/lib.linux-armv7l-cpython-311/pybiotk/annodb
2023-11-01T14:06:22,739   copying src/pybiotk/annodb/gene.py -> build/lib.linux-armv7l-cpython-311/pybiotk/annodb
2023-11-01T14:06:22,741   copying src/pybiotk/annodb/transcript.py -> build/lib.linux-armv7l-cpython-311/pybiotk/annodb
2023-11-01T14:06:22,744   creating build/lib.linux-armv7l-cpython-311/pybiotk/data
2023-11-01T14:06:22,745   copying src/pybiotk/data/__init__.py -> build/lib.linux-armv7l-cpython-311/pybiotk/data
2023-11-01T14:06:22,747   creating build/lib.linux-armv7l-cpython-311/pybiotk/string
2023-11-01T14:06:22,748   copying src/pybiotk/string/__init__.py -> build/lib.linux-armv7l-cpython-311/pybiotk/string
2023-11-01T14:06:22,749   copying src/pybiotk/string/motif.py -> build/lib.linux-armv7l-cpython-311/pybiotk/string
2023-11-01T14:06:22,751   copying src/pybiotk/string/sequence.py -> build/lib.linux-armv7l-cpython-311/pybiotk/string
2023-11-01T14:06:22,753   running egg_info
2023-11-01T14:06:22,758   writing src/pybiotk.egg-info/PKG-INFO
2023-11-01T14:06:22,762   writing dependency_links to src/pybiotk.egg-info/dependency_links.txt
2023-11-01T14:06:22,764   writing entry points to src/pybiotk.egg-info/entry_points.txt
2023-11-01T14:06:22,766   writing requirements to src/pybiotk.egg-info/requires.txt
2023-11-01T14:06:22,767   writing top-level names to src/pybiotk.egg-info/top_level.txt
2023-11-01T14:06:22,803   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2023-11-01T14:06:22,806   reading manifest file 'src/pybiotk.egg-info/SOURCES.txt'
2023-11-01T14:06:22,810   adding license file 'LICENSE.txt'
2023-11-01T14:06:22,816   writing manifest file 'src/pybiotk.egg-info/SOURCES.txt'
2023-11-01T14:06:22,819   copying src/pybiotk/data/hg38.chrom.sizes -> build/lib.linux-armv7l-cpython-311/pybiotk/data
2023-11-01T14:06:22,822   copying src/pybiotk/data/mm10.chrom.sizes -> build/lib.linux-armv7l-cpython-311/pybiotk/data
2023-11-01T14:06:22,828   running build_ext
2023-11-01T14:06:22,833   building 'pybiotk.bx.bitset' extension
2023-11-01T14:06:22,834   creating build/temp.linux-armv7l-cpython-311
2023-11-01T14:06:22,834   creating build/temp.linux-armv7l-cpython-311/build
2023-11-01T14:06:22,835   creating build/temp.linux-armv7l-cpython-311/build/src
2023-11-01T14:06:22,836   creating build/temp.linux-armv7l-cpython-311/build/src/bx
2023-11-01T14:06:22,837   creating build/temp.linux-armv7l-cpython-311/src
2023-11-01T14:06:22,838   creating build/temp.linux-armv7l-cpython-311/src/bx
2023-11-01T14:06:22,838   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.11 -c build/src/bx/bitset.c -o build/temp.linux-armv7l-cpython-311/build/src/bx/bitset.o
2023-11-01T14:06:30,398   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.11 -c src/bx/binBits.c -o build/temp.linux-armv7l-cpython-311/src/bx/binBits.o
2023-11-01T14:06:30,843   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.11 -c src/bx/bits.c -o build/temp.linux-armv7l-cpython-311/src/bx/bits.o
2023-11-01T14:06:31,309   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.11 -c src/bx/common.c -o build/temp.linux-armv7l-cpython-311/src/bx/common.o
2023-11-01T14:06:31,499   creating build/lib.linux-armv7l-cpython-311/pybiotk/bx
2023-11-01T14:06:31,500   arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/build/src/bx/bitset.o build/temp.linux-armv7l-cpython-311/src/bx/binBits.o build/temp.linux-armv7l-cpython-311/src/bx/bits.o build/temp.linux-armv7l-cpython-311/src/bx/common.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/pybiotk/bx/bitset.cpython-311-arm-linux-gnueabihf.so
2023-11-01T14:06:31,624   building 'pybiotk.bx.cluster' extension
2023-11-01T14:06:31,624   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.11 -c build/src/bx/cluster.c -o build/temp.linux-armv7l-cpython-311/build/src/bx/cluster.o
2023-11-01T14:06:33,737   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.11 -c src/bx/cluster.c -o build/temp.linux-armv7l-cpython-311/src/bx/cluster.o
2023-11-01T14:06:34,265   arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/build/src/bx/cluster.o build/temp.linux-armv7l-cpython-311/src/bx/cluster.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/pybiotk/bx/cluster.cpython-311-arm-linux-gnueabihf.so
2023-11-01T14:06:34,365   building 'pybiotk.bx.intersection' extension
2023-11-01T14:06:34,366   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c build/src/bx/intersection.c -o build/temp.linux-armv7l-cpython-311/build/src/bx/intersection.o
2023-11-01T14:06:49,299   arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/build/src/bx/intersection.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/pybiotk/bx/intersection.cpython-311-arm-linux-gnueabihf.so
2023-11-01T14:06:49,421   running build_scripts
2023-11-01T14:06:49,422   creating build/scripts-3.11
2023-11-01T14:06:49,423   copying rscripts/plot_hist.R -> build/scripts-3.11
2023-11-01T14:06:49,426   copying rscripts/plot_rep_cor.R -> build/scripts-3.11
2023-11-01T14:06:49,428   copying rscripts/plot_chip_summary.R -> build/scripts-3.11
2023-11-01T14:06:49,431   copying rscripts/diff_expr_edgeR.R -> build/scripts-3.11
2023-11-01T14:06:49,433   copying rscripts/plot_corr.R -> build/scripts-3.11
2023-11-01T14:06:49,436   copying rscripts/diff_expr_DESeq2.R -> build/scripts-3.11
2023-11-01T14:06:49,438   copying rscripts/plot_bar.R -> build/scripts-3.11
2023-11-01T14:06:49,440   copying rscripts/diff_expr_plot.R -> build/scripts-3.11
2023-11-01T14:06:49,443   copying rscripts/peak_anno.R -> build/scripts-3.11
2023-11-01T14:06:49,445   copying rscripts/plot_deeptools_fragmentsize.R -> build/scripts-3.11
2023-11-01T14:06:49,448   copying rscripts/plot_venn.R -> build/scripts-3.11
2023-11-01T14:06:49,450   copying rscripts/plot_FRiPs.R -> build/scripts-3.11
2023-11-01T14:06:49,452   copying rscripts/plot_peak_width.R -> build/scripts-3.11
2023-11-01T14:06:49,455   copying scripts/gtfparser.sh -> build/scripts-3.11
2023-11-01T14:06:49,457   copying scripts/fasta_u2t.sh -> build/scripts-3.11
2023-11-01T14:06:49,459   copying scripts/get_chrom_length.sh -> build/scripts-3.11
2023-11-01T14:06:49,461   copying scripts/fasta_len.sh -> build/scripts-3.11
2023-11-01T14:06:49,463   copying scripts/merge_subseq.sh -> build/scripts-3.11
2023-11-01T14:06:49,465   copying scripts/fastq_len.sh -> build/scripts-3.11
2023-11-01T14:06:49,467   copying scripts/remove_duplicates.sh -> build/scripts-3.11
2023-11-01T14:06:49,469   changing mode of build/scripts-3.11/plot_hist.R from 644 to 755
2023-11-01T14:06:49,469   changing mode of build/scripts-3.11/plot_rep_cor.R from 644 to 755
2023-11-01T14:06:49,470   changing mode of build/scripts-3.11/plot_chip_summary.R from 644 to 755
2023-11-01T14:06:49,470   changing mode of build/scripts-3.11/diff_expr_edgeR.R from 644 to 755
2023-11-01T14:06:49,471   changing mode of build/scripts-3.11/plot_corr.R from 644 to 755
2023-11-01T14:06:49,471   changing mode of build/scripts-3.11/diff_expr_DESeq2.R from 644 to 755
2023-11-01T14:06:49,472   changing mode of build/scripts-3.11/plot_bar.R from 644 to 755
2023-11-01T14:06:49,473   changing mode of build/scripts-3.11/diff_expr_plot.R from 644 to 755
2023-11-01T14:06:49,473   changing mode of build/scripts-3.11/peak_anno.R from 644 to 755
2023-11-01T14:06:49,474   changing mode of build/scripts-3.11/plot_deeptools_fragmentsize.R from 644 to 755
2023-11-01T14:06:49,474   changing mode of build/scripts-3.11/plot_venn.R from 644 to 755
2023-11-01T14:06:49,475   changing mode of build/scripts-3.11/plot_FRiPs.R from 644 to 755
2023-11-01T14:06:49,475   changing mode of build/scripts-3.11/plot_peak_width.R from 644 to 755
2023-11-01T14:06:49,476   changing mode of build/scripts-3.11/gtfparser.sh from 644 to 755
2023-11-01T14:06:49,476   changing mode of build/scripts-3.11/fasta_u2t.sh from 644 to 755
2023-11-01T14:06:49,477   changing mode of build/scripts-3.11/get_chrom_length.sh from 644 to 755
2023-11-01T14:06:49,478   changing mode of build/scripts-3.11/fasta_len.sh from 644 to 755
2023-11-01T14:06:49,478   changing mode of build/scripts-3.11/merge_subseq.sh from 644 to 755
2023-11-01T14:06:49,479   changing mode of build/scripts-3.11/fastq_len.sh from 644 to 755
2023-11-01T14:06:49,479   changing mode of build/scripts-3.11/remove_duplicates.sh from 644 to 755
2023-11-01T14:06:49,494   installing to build/bdist.linux-armv7l/wheel
2023-11-01T14:06:49,494   running install
2023-11-01T14:06:49,520   running install_lib
2023-11-01T14:06:49,528   creating build/bdist.linux-armv7l
2023-11-01T14:06:49,529   creating build/bdist.linux-armv7l/wheel
2023-11-01T14:06:49,531   creating build/bdist.linux-armv7l/wheel/stream
2023-11-01T14:06:49,531   copying build/lib.linux-armv7l-cpython-311/stream/__init__.py -> build/bdist.linux-armv7l/wheel/stream
2023-11-01T14:06:49,533   copying build/lib.linux-armv7l-cpython-311/stream/pipe.py -> build/bdist.linux-armv7l/wheel/stream
2023-11-01T14:06:49,536   copying build/lib.linux-armv7l-cpython-311/stream/stream.py -> build/bdist.linux-armv7l/wheel/stream
2023-11-01T14:06:49,539   creating build/bdist.linux-armv7l/wheel/pybiotk
2023-11-01T14:06:49,540   creating build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T14:06:49,541   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/merge_row.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T14:06:49,544   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/fastx_rename.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T14:06:49,546   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/fasta_filter.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T14:06:49,548   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/summary_log.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T14:06:49,550   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/fragment_size.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T14:06:49,553   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/merge_subseq.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T14:06:49,554   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/subseq_analysis.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T14:06:49,556   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/seq_random.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T14:06:49,558   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T14:06:49,560   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/fastq_uniq.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T14:06:49,562   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/read_tables.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T14:06:49,565   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/gtf_filter.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T14:06:49,566   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/pyanno.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T14:06:49,569   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/genomefetcher.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T14:06:49,571   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/rmats_filter.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T14:06:49,573   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/fastq_join.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T14:06:49,575   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/utils.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T14:06:49,578   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/bam_random.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T14:06:49,579   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/reverse_fastx.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T14:06:49,581   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/reference_count.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T14:06:49,583   copying build/lib.linux-armv7l-cpython-311/pybiotk/utils/normalize.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T14:06:49,586   creating build/bdist.linux-armv7l/wheel/pybiotk/convert
2023-11-01T14:06:49,587   copying build/lib.linux-armv7l-cpython-311/pybiotk/convert/fa2fastq.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2023-11-01T14:06:49,589   copying build/lib.linux-armv7l-cpython-311/pybiotk/convert/fq2fasta.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2023-11-01T14:06:49,591   copying build/lib.linux-armv7l-cpython-311/pybiotk/convert/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2023-11-01T14:06:49,593   copying build/lib.linux-armv7l-cpython-311/pybiotk/convert/bam2fastx.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2023-11-01T14:06:49,595   copying build/lib.linux-armv7l-cpython-311/pybiotk/convert/gtf2bed.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2023-11-01T14:06:49,597   copying build/lib.linux-armv7l-cpython-311/pybiotk/convert/bampe_order_by_name.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2023-11-01T14:06:49,599   copying build/lib.linux-armv7l-cpython-311/pybiotk/convert/bed2bedgraph.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2023-11-01T14:06:49,601   copying build/lib.linux-armv7l-cpython-311/pybiotk/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk
2023-11-01T14:06:49,602   creating build/bdist.linux-armv7l/wheel/pybiotk/intervals
2023-11-01T14:06:49,603   copying build/lib.linux-armv7l-cpython-311/pybiotk/intervals/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/intervals
2023-11-01T14:06:49,605   copying build/lib.linux-armv7l-cpython-311/pybiotk/intervals/grange.py -> build/bdist.linux-armv7l/wheel/pybiotk/intervals
2023-11-01T14:06:49,607   copying build/lib.linux-armv7l-cpython-311/pybiotk/intervals/merge_bed3.py -> build/bdist.linux-armv7l/wheel/pybiotk/intervals
2023-11-01T14:06:49,609   copying build/lib.linux-armv7l-cpython-311/pybiotk/intervals/merge_intervals.py -> build/bdist.linux-armv7l/wheel/pybiotk/intervals
2023-11-01T14:06:49,611   creating build/bdist.linux-armv7l/wheel/pybiotk/io
2023-11-01T14:06:49,613   copying build/lib.linux-armv7l-cpython-311/pybiotk/io/bed.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2023-11-01T14:06:49,615   copying build/lib.linux-armv7l-cpython-311/pybiotk/io/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2023-11-01T14:06:49,617   copying build/lib.linux-armv7l-cpython-311/pybiotk/io/gtf.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2023-11-01T14:06:49,619   copying build/lib.linux-armv7l-cpython-311/pybiotk/io/bam.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2023-11-01T14:06:49,622   copying build/lib.linux-armv7l-cpython-311/pybiotk/io/fasta.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2023-11-01T14:06:49,624   copying build/lib.linux-armv7l-cpython-311/pybiotk/io/fastq.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2023-11-01T14:06:49,626   copying build/lib.linux-armv7l-cpython-311/pybiotk/io/bw.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2023-11-01T14:06:49,628   creating build/bdist.linux-armv7l/wheel/pybiotk/annodb
2023-11-01T14:06:49,630   copying build/lib.linux-armv7l-cpython-311/pybiotk/annodb/anno.py -> build/bdist.linux-armv7l/wheel/pybiotk/annodb
2023-11-01T14:06:49,632   copying build/lib.linux-armv7l-cpython-311/pybiotk/annodb/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/annodb
2023-11-01T14:06:49,634   copying build/lib.linux-armv7l-cpython-311/pybiotk/annodb/merged_transcript.py -> build/bdist.linux-armv7l/wheel/pybiotk/annodb
2023-11-01T14:06:49,636   copying build/lib.linux-armv7l-cpython-311/pybiotk/annodb/gene.py -> build/bdist.linux-armv7l/wheel/pybiotk/annodb
2023-11-01T14:06:49,638   copying build/lib.linux-armv7l-cpython-311/pybiotk/annodb/transcript.py -> build/bdist.linux-armv7l/wheel/pybiotk/annodb
2023-11-01T14:06:49,641   creating build/bdist.linux-armv7l/wheel/pybiotk/data
2023-11-01T14:06:49,642   copying build/lib.linux-armv7l-cpython-311/pybiotk/data/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/data
2023-11-01T14:06:49,644   copying build/lib.linux-armv7l-cpython-311/pybiotk/data/hg38.chrom.sizes -> build/bdist.linux-armv7l/wheel/pybiotk/data
2023-11-01T14:06:49,646   copying build/lib.linux-armv7l-cpython-311/pybiotk/data/mm10.chrom.sizes -> build/bdist.linux-armv7l/wheel/pybiotk/data
2023-11-01T14:06:49,649   creating build/bdist.linux-armv7l/wheel/pybiotk/string
2023-11-01T14:06:49,650   copying build/lib.linux-armv7l-cpython-311/pybiotk/string/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/string
2023-11-01T14:06:49,652   copying build/lib.linux-armv7l-cpython-311/pybiotk/string/motif.py -> build/bdist.linux-armv7l/wheel/pybiotk/string
2023-11-01T14:06:49,653   copying build/lib.linux-armv7l-cpython-311/pybiotk/string/sequence.py -> build/bdist.linux-armv7l/wheel/pybiotk/string
2023-11-01T14:06:49,655   creating build/bdist.linux-armv7l/wheel/pybiotk/bx
2023-11-01T14:06:49,656   copying build/lib.linux-armv7l-cpython-311/pybiotk/bx/bitset.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pybiotk/bx
2023-11-01T14:06:49,666   copying build/lib.linux-armv7l-cpython-311/pybiotk/bx/intersection.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pybiotk/bx
2023-11-01T14:06:49,678   copying build/lib.linux-armv7l-cpython-311/pybiotk/bx/cluster.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pybiotk/bx
2023-11-01T14:06:49,682   running install_egg_info
2023-11-01T14:06:49,691   Copying src/pybiotk.egg-info to build/bdist.linux-armv7l/wheel/pybiotk-1.2.5-py3.11.egg-info
2023-11-01T14:06:49,705   running install_scripts
2023-11-01T14:06:49,706   creating build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data
2023-11-01T14:06:49,707   creating build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T14:06:49,708   copying build/scripts-3.11/plot_hist.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T14:06:49,710   copying build/scripts-3.11/plot_rep_cor.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T14:06:49,711   copying build/scripts-3.11/plot_chip_summary.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T14:06:49,714   copying build/scripts-3.11/diff_expr_edgeR.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T14:06:49,716   copying build/scripts-3.11/gtfparser.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T14:06:49,718   copying build/scripts-3.11/plot_corr.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T14:06:49,720   copying build/scripts-3.11/fasta_u2t.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T14:06:49,721   copying build/scripts-3.11/get_chrom_length.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T14:06:49,723   copying build/scripts-3.11/diff_expr_DESeq2.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T14:06:49,726   copying build/scripts-3.11/fasta_len.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T14:06:49,727   copying build/scripts-3.11/plot_bar.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T14:06:49,729   copying build/scripts-3.11/diff_expr_plot.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T14:06:49,732   copying build/scripts-3.11/merge_subseq.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T14:06:49,734   copying build/scripts-3.11/peak_anno.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T14:06:49,736   copying build/scripts-3.11/fastq_len.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T14:06:49,737   copying build/scripts-3.11/plot_deeptools_fragmentsize.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T14:06:49,739   copying build/scripts-3.11/plot_venn.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T14:06:49,741   copying build/scripts-3.11/plot_FRiPs.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T14:06:49,743   copying build/scripts-3.11/plot_peak_width.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T14:06:49,745   copying build/scripts-3.11/remove_duplicates.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T14:06:49,747   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/plot_hist.R to 755
2023-11-01T14:06:49,748   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/plot_rep_cor.R to 755
2023-11-01T14:06:49,748   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/plot_chip_summary.R to 755
2023-11-01T14:06:49,749   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/diff_expr_edgeR.R to 755
2023-11-01T14:06:49,749   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/gtfparser.sh to 755
2023-11-01T14:06:49,750   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/plot_corr.R to 755
2023-11-01T14:06:49,750   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/fasta_u2t.sh to 755
2023-11-01T14:06:49,751   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/get_chrom_length.sh to 755
2023-11-01T14:06:49,751   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/diff_expr_DESeq2.R to 755
2023-11-01T14:06:49,751   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/fasta_len.sh to 755
2023-11-01T14:06:49,752   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/plot_bar.R to 755
2023-11-01T14:06:49,752   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/diff_expr_plot.R to 755
2023-11-01T14:06:49,753   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/merge_subseq.sh to 755
2023-11-01T14:06:49,753   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/peak_anno.R to 755
2023-11-01T14:06:49,754   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/fastq_len.sh to 755
2023-11-01T14:06:49,754   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/plot_deeptools_fragmentsize.R to 755
2023-11-01T14:06:49,754   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/plot_venn.R to 755
2023-11-01T14:06:49,755   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/plot_FRiPs.R to 755
2023-11-01T14:06:49,756   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/plot_peak_width.R to 755
2023-11-01T14:06:49,756   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/remove_duplicates.sh to 755
2023-11-01T14:06:49,805   creating build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.dist-info/WHEEL
2023-11-01T14:06:49,808   creating '/tmp/pip-wheel-oytir445/.tmp-5ujv6u30/pybiotk-1.2.5-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-11-01T14:06:49,810   adding 'pybiotk/__init__.py'
2023-11-01T14:06:49,812   adding 'pybiotk/annodb/__init__.py'
2023-11-01T14:06:49,814   adding 'pybiotk/annodb/anno.py'
2023-11-01T14:06:49,816   adding 'pybiotk/annodb/gene.py'
2023-11-01T14:06:49,818   adding 'pybiotk/annodb/merged_transcript.py'
2023-11-01T14:06:49,819   adding 'pybiotk/annodb/transcript.py'
2023-11-01T14:06:49,925   adding 'pybiotk/bx/bitset.cpython-311-arm-linux-gnueabihf.so'
2023-11-01T14:06:49,957   adding 'pybiotk/bx/cluster.cpython-311-arm-linux-gnueabihf.so'
2023-11-01T14:06:50,091   adding 'pybiotk/bx/intersection.cpython-311-arm-linux-gnueabihf.so'
2023-11-01T14:06:50,097   adding 'pybiotk/convert/__init__.py'
2023-11-01T14:06:50,099   adding 'pybiotk/convert/bam2fastx.py'
2023-11-01T14:06:50,100   adding 'pybiotk/convert/bampe_order_by_name.py'
2023-11-01T14:06:50,101   adding 'pybiotk/convert/bed2bedgraph.py'
2023-11-01T14:06:50,103   adding 'pybiotk/convert/fa2fastq.py'
2023-11-01T14:06:50,104   adding 'pybiotk/convert/fq2fasta.py'
2023-11-01T14:06:50,105   adding 'pybiotk/convert/gtf2bed.py'
2023-11-01T14:06:50,107   adding 'pybiotk/data/__init__.py'
2023-11-01T14:06:50,109   adding 'pybiotk/data/hg38.chrom.sizes'
2023-11-01T14:06:50,111   adding 'pybiotk/data/mm10.chrom.sizes'
2023-11-01T14:06:50,112   adding 'pybiotk/intervals/__init__.py'
2023-11-01T14:06:50,114   adding 'pybiotk/intervals/grange.py'
2023-11-01T14:06:50,115   adding 'pybiotk/intervals/merge_bed3.py'
2023-11-01T14:06:50,116   adding 'pybiotk/intervals/merge_intervals.py'
2023-11-01T14:06:50,118   adding 'pybiotk/io/__init__.py'
2023-11-01T14:06:50,120   adding 'pybiotk/io/bam.py'
2023-11-01T14:06:50,121   adding 'pybiotk/io/bed.py'
2023-11-01T14:06:50,122   adding 'pybiotk/io/bw.py'
2023-11-01T14:06:50,124   adding 'pybiotk/io/fasta.py'
2023-11-01T14:06:50,125   adding 'pybiotk/io/fastq.py'
2023-11-01T14:06:50,127   adding 'pybiotk/io/gtf.py'
2023-11-01T14:06:50,129   adding 'pybiotk/string/__init__.py'
2023-11-01T14:06:50,130   adding 'pybiotk/string/motif.py'
2023-11-01T14:06:50,131   adding 'pybiotk/string/sequence.py'
2023-11-01T14:06:50,133   adding 'pybiotk/utils/__init__.py'
2023-11-01T14:06:50,134   adding 'pybiotk/utils/bam_random.py'
2023-11-01T14:06:50,135   adding 'pybiotk/utils/fasta_filter.py'
2023-11-01T14:06:50,137   adding 'pybiotk/utils/fastq_join.py'
2023-11-01T14:06:50,138   adding 'pybiotk/utils/fastq_uniq.py'
2023-11-01T14:06:50,140   adding 'pybiotk/utils/fastx_rename.py'
2023-11-01T14:06:50,141   adding 'pybiotk/utils/fragment_size.py'
2023-11-01T14:06:50,143   adding 'pybiotk/utils/genomefetcher.py'
2023-11-01T14:06:50,144   adding 'pybiotk/utils/gtf_filter.py'
2023-11-01T14:06:50,145   adding 'pybiotk/utils/merge_row.py'
2023-11-01T14:06:50,147   adding 'pybiotk/utils/merge_subseq.py'
2023-11-01T14:06:50,148   adding 'pybiotk/utils/normalize.py'
2023-11-01T14:06:50,150   adding 'pybiotk/utils/pyanno.py'
2023-11-01T14:06:50,151   adding 'pybiotk/utils/read_tables.py'
2023-11-01T14:06:50,152   adding 'pybiotk/utils/reference_count.py'
2023-11-01T14:06:50,153   adding 'pybiotk/utils/reverse_fastx.py'
2023-11-01T14:06:50,155   adding 'pybiotk/utils/rmats_filter.py'
2023-11-01T14:06:50,156   adding 'pybiotk/utils/seq_random.py'
2023-11-01T14:06:50,157   adding 'pybiotk/utils/subseq_analysis.py'
2023-11-01T14:06:50,159   adding 'pybiotk/utils/summary_log.py'
2023-11-01T14:06:50,161   adding 'pybiotk/utils/utils.py'
2023-11-01T14:06:50,164   adding 'pybiotk-1.2.5.data/scripts/diff_expr_DESeq2.R'
2023-11-01T14:06:50,165   adding 'pybiotk-1.2.5.data/scripts/diff_expr_edgeR.R'
2023-11-01T14:06:50,168   adding 'pybiotk-1.2.5.data/scripts/diff_expr_plot.R'
2023-11-01T14:06:50,169   adding 'pybiotk-1.2.5.data/scripts/fasta_len.sh'
2023-11-01T14:06:50,170   adding 'pybiotk-1.2.5.data/scripts/fasta_u2t.sh'
2023-11-01T14:06:50,171   adding 'pybiotk-1.2.5.data/scripts/fastq_len.sh'
2023-11-01T14:06:50,172   adding 'pybiotk-1.2.5.data/scripts/get_chrom_length.sh'
2023-11-01T14:06:50,174   adding 'pybiotk-1.2.5.data/scripts/gtfparser.sh'
2023-11-01T14:06:50,175   adding 'pybiotk-1.2.5.data/scripts/merge_subseq.sh'
2023-11-01T14:06:50,176   adding 'pybiotk-1.2.5.data/scripts/peak_anno.R'
2023-11-01T14:06:50,178   adding 'pybiotk-1.2.5.data/scripts/plot_FRiPs.R'
2023-11-01T14:06:50,179   adding 'pybiotk-1.2.5.data/scripts/plot_bar.R'
2023-11-01T14:06:50,180   adding 'pybiotk-1.2.5.data/scripts/plot_chip_summary.R'
2023-11-01T14:06:50,182   adding 'pybiotk-1.2.5.data/scripts/plot_corr.R'
2023-11-01T14:06:50,183   adding 'pybiotk-1.2.5.data/scripts/plot_deeptools_fragmentsize.R'
2023-11-01T14:06:50,184   adding 'pybiotk-1.2.5.data/scripts/plot_hist.R'
2023-11-01T14:06:50,186   adding 'pybiotk-1.2.5.data/scripts/plot_peak_width.R'
2023-11-01T14:06:50,187   adding 'pybiotk-1.2.5.data/scripts/plot_rep_cor.R'
2023-11-01T14:06:50,188   adding 'pybiotk-1.2.5.data/scripts/plot_venn.R'
2023-11-01T14:06:50,190   adding 'pybiotk-1.2.5.data/scripts/remove_duplicates.sh'
2023-11-01T14:06:50,192   adding 'stream/__init__.py'
2023-11-01T14:06:50,194   adding 'stream/pipe.py'
2023-11-01T14:06:50,196   adding 'stream/stream.py'
2023-11-01T14:06:50,197   adding 'pybiotk-1.2.5.dist-info/LICENSE.txt'
2023-11-01T14:06:50,199   adding 'pybiotk-1.2.5.dist-info/METADATA'
2023-11-01T14:06:50,200   adding 'pybiotk-1.2.5.dist-info/WHEEL'
2023-11-01T14:06:50,201   adding 'pybiotk-1.2.5.dist-info/entry_points.txt'
2023-11-01T14:06:50,202   adding 'pybiotk-1.2.5.dist-info/top_level.txt'
2023-11-01T14:06:50,203   adding 'pybiotk-1.2.5.dist-info/RECORD'
2023-11-01T14:06:50,216   removing build/bdist.linux-armv7l/wheel
2023-11-01T14:06:50,370   Building wheel for pybiotk (pyproject.toml): finished with status 'done'
2023-11-01T14:06:50,389   Created wheel for pybiotk: filename=pybiotk-1.2.5-cp311-cp311-linux_armv7l.whl size=608279 sha256=722db10933ea8fe132e2a1a28e4e296ab1e722f38a32d0088639c3fce026ff74
2023-11-01T14:06:50,390   Stored in directory: /tmp/pip-ephem-wheel-cache-72svwcrf/wheels/ae/fc/8c/7020f34b1aa7c24e8c7d78c75e8875cfefaba5f18556d08c9e
2023-11-01T14:06:50,403 Successfully built pybiotk
2023-11-01T14:06:50,429 Removed build tracker: '/tmp/pip-build-tracker-dwio6chv'